Miyakogusa Predicted Gene

Lj4g3v2717030.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2717030.1 CUFF.51543.1
         (193 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26085.2 | Symbols:  | CAAX amino terminal protease family pr...   161   3e-40
AT3G26085.1 | Symbols:  | CAAX amino terminal protease family pr...   159   1e-39
AT3G26085.3 | Symbols:  | CAAX amino terminal protease family pr...   158   2e-39

>AT3G26085.2 | Symbols:  | CAAX amino terminal protease family
           protein | chr3:9530842-9532397 FORWARD LENGTH=322
          Length = 322

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/189 (47%), Positives = 123/189 (65%), Gaps = 12/189 (6%)

Query: 8   LNCCCCWSTVKYAHTIYPAPIINLLHRRRYSTCSFAKKRLKKSNRDVPE---------TF 58
            N    WS    ++TI    +  LL  +     S ++K LKK  R+  +         T 
Sbjct: 41  FNVAASWSEQMISYTI--VCLFCLLGFKFDVRASSSRKSLKKLKRESQQGKDIGLRNVTD 98

Query: 59  EDLSDDKFVQNDNLDTSLNPAAQNSNPMPSRNAVLQACTITSALIAAVGIVIRQVSHIAS 118
           E++S  +F +   +D+S +  + +      R+ VLQACT+TS L+AA+G++IR+ SH+AS
Sbjct: 99  EEVSSPRF-EEAQVDSSTSKDSIDVFVAAPRDKVLQACTVTSGLMAALGLIIRKASHVAS 157

Query: 119 IEGLPVLDCSTEVSFGFETWHLELITGLVVLISSCRFLLLKTWPDFAESSEAANQQVLSS 178
            EGL V DCS +V FGFETWHL LI G+VV ISS RFLLLK+WPDFA+SSEAAN+Q+L+S
Sbjct: 158 TEGLLVPDCSIDVPFGFETWHLGLIAGIVVFISSSRFLLLKSWPDFADSSEAANRQILTS 217

Query: 179 LQPLDYIVV 187
           L+PLDY+VV
Sbjct: 218 LEPLDYLVV 226


>AT3G26085.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr3:9530842-9532397 FORWARD LENGTH=293
          Length = 293

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/160 (51%), Positives = 113/160 (70%), Gaps = 10/160 (6%)

Query: 40  CSFAKKRLKKSNRDVPE---------TFEDLSDDKFVQNDNLDTSLNPAAQNSNPMPSRN 90
            S ++K LKK  R+  +         T E++S  +F +   +D+S +  + +      R+
Sbjct: 42  ASSSRKSLKKLKRESQQGKDIGLRNVTDEEVSSPRF-EEAQVDSSTSKDSIDVFVAAPRD 100

Query: 91  AVLQACTITSALIAAVGIVIRQVSHIASIEGLPVLDCSTEVSFGFETWHLELITGLVVLI 150
            VLQACT+TS L+AA+G++IR+ SH+AS EGL V DCS +V FGFETWHL LI G+VV I
Sbjct: 101 KVLQACTVTSGLMAALGLIIRKASHVASTEGLLVPDCSIDVPFGFETWHLGLIAGIVVFI 160

Query: 151 SSCRFLLLKTWPDFAESSEAANQQVLSSLQPLDYIVVRIF 190
           SS RFLLLK+WPDFA+SSEAAN+Q+L+SL+PLDY+VV + 
Sbjct: 161 SSSRFLLLKSWPDFADSSEAANRQILTSLEPLDYLVVAML 200


>AT3G26085.3 | Symbols:  | CAAX amino terminal protease family
           protein | chr3:9530616-9532397 FORWARD LENGTH=313
          Length = 313

 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 82/160 (51%), Positives = 113/160 (70%), Gaps = 10/160 (6%)

Query: 40  CSFAKKRLKKSNRDVPE---------TFEDLSDDKFVQNDNLDTSLNPAAQNSNPMPSRN 90
            S ++K LKK  R+  +         T E++S  +F +   +D+S +  + +      R+
Sbjct: 62  ASSSRKSLKKLKRESQQGKDIGLRNVTDEEVSSPRF-EEAQVDSSTSKDSIDVFVAAPRD 120

Query: 91  AVLQACTITSALIAAVGIVIRQVSHIASIEGLPVLDCSTEVSFGFETWHLELITGLVVLI 150
            VLQACT+TS L+AA+G++IR+ SH+AS EGL V DCS +V FGFETWHL LI G+VV I
Sbjct: 121 KVLQACTVTSGLMAALGLIIRKASHVASTEGLLVPDCSIDVPFGFETWHLGLIAGIVVFI 180

Query: 151 SSCRFLLLKTWPDFAESSEAANQQVLSSLQPLDYIVVRIF 190
           SS RFLLLK+WPDFA+SSEAAN+Q+L+SL+PLDY+VV + 
Sbjct: 181 SSSRFLLLKSWPDFADSSEAANRQILTSLEPLDYLVVAML 220