Miyakogusa Predicted Gene

Lj4g3v2704760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2704760.1 Non Chatacterized Hit- tr|B9SI30|B9SI30_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,61.25,2e-19,seg,NULL,NODE_52891_length_308_cov_20.983767.path2.1
         (108 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G07220.1 | Symbols:  | Arabidopsis thaliana protein of unknow...   114   1e-26

>AT1G07220.1 | Symbols:  | Arabidopsis thaliana protein of unknown
          function (DUF821) | chr1:2217073-2219379 REVERSE
          LENGTH=507
          Length = 507

 Score =  114 bits (285), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/82 (57%), Positives = 62/82 (75%)

Query: 6  KHYPRSPTYLYPSVVALSLFSITVLLLYKVDDVVSRTGTVVGHNLEPTPWHVFPHKTFDE 65
          K  PRSP+YL   V+ALS FS T LL YKVDD +++T T+ GHNLEPTPWH+FP K+F  
Sbjct: 12 KSSPRSPSYLLLCVLALSFFSFTALLFYKVDDFIAQTKTLAGHNLEPTPWHIFPRKSFSA 71

Query: 66 ESRHGRAYKIIQCSYLTCRYSS 87
           ++H +AY+I+QCSY +C Y +
Sbjct: 72 ATKHSQAYRILQCSYFSCPYKA 93