Miyakogusa Predicted Gene

Lj4g3v2704660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2704660.1 Non Chatacterized Hit- tr|I3SSW3|I3SSW3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=3
SV=1,97.8,1.4013e-45,Ribosomal_L7Ae,Ribosomal protein
L7Ae/L30e/S12e/Gadd45; RIBOSOMAL_L30E_1,Ribosomal protein L30e,
con,CUFF.51514.1
         (91 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G18740.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   174   1e-44
AT1G36240.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   173   2e-44
AT1G77940.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd4...   172   4e-44

>AT3G18740.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr3:6453437-6453870 FORWARD LENGTH=112
          Length = 112

 Score =  174 bits (441), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 81/91 (89%), Positives = 89/91 (97%)

Query: 1   MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 60
           MKSGK+TLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEIEYYAMLAKVGVH YNGNNVDL
Sbjct: 22  MKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRYNGNNVDL 81

Query: 61  GTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 91
           GTACGKY+RV CLSI+DPGDSDIIKTLPGDQ
Sbjct: 82  GTACGKYFRVSCLSIVDPGDSDIIKTLPGDQ 112


>AT1G36240.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr1:13614890-13616233 FORWARD
           LENGTH=112
          Length = 112

 Score =  173 bits (438), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 80/91 (87%), Positives = 89/91 (97%)

Query: 1   MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 60
           MKSGK+TLGYK+VLKSLRSSKGKLI+I++NCPPLR+SEIEYYAMLAKVGVHHYN NNVDL
Sbjct: 22  MKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHYNRNNVDL 81

Query: 61  GTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 91
           GTACGKY+RV CLSI+DPGDSDIIK+LPGDQ
Sbjct: 82  GTACGKYFRVSCLSIVDPGDSDIIKSLPGDQ 112


>AT1G77940.1 | Symbols:  | Ribosomal protein L7Ae/L30e/S12e/Gadd45
           family protein | chr1:29304116-29305288 REVERSE
           LENGTH=112
          Length = 112

 Score =  172 bits (436), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 79/91 (86%), Positives = 88/91 (96%)

Query: 1   MKSGKFTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDL 60
           MKSGK+TLGYK+VLKSLR SKGKLI+I+ NCPPLR+SEIEYYAMLAKVGVHHYNGNNVDL
Sbjct: 22  MKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHYNGNNVDL 81

Query: 61  GTACGKYYRVCCLSIIDPGDSDIIKTLPGDQ 91
           GTACGKY+RV CLSI+DPGDSDIIK++PGDQ
Sbjct: 82  GTACGKYFRVSCLSIVDPGDSDIIKSIPGDQ 112