Miyakogusa Predicted Gene

Lj4g3v2693600.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2693600.1 Non Chatacterized Hit- tr|G7L8V7|G7L8V7_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,52.08,5e-17,
,CUFF.51520.1
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G61000.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    60   4e-10

>AT1G61000.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: mitosis; LOCATED IN: plasma membrane;
           EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s:
           Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972
           Blast hits to 29793 proteins in 2070 species: Archae -
           902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156;
           Plants - 2312; Viruses - 158; Other Eukaryotes - 12412
           (source: NCBI BLink). | chr1:22471096-22474046 REVERSE
           LENGTH=440
          Length = 440

 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 49/82 (59%)

Query: 1   MCEEATNYLSSAKSEVESKRCTLETRQRNVEAVLSEVDAVNCKITSVKELASVRVEQLDR 60
           M ++ T  L+  K EVES+R  LETRQ NVE+V++ VD    K   V++    +V++L  
Sbjct: 358 MFDDWTKQLNELKVEVESRRRELETRQTNVESVVAMVDDNTAKTNQVRQSGEAKVKKLAA 417

Query: 61  KCEEIVVEFHKYANSISRVIKS 82
           K EEIV +FH+Y  S    + S
Sbjct: 418 KYEEIVKQFHEYTVSFDAFLPS 439