Miyakogusa Predicted Gene
- Lj4g3v2691870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2691870.1 Non Chatacterized Hit- tr|D8T2T4|D8T2T4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.66,8e-19,coiled-coil,NULL; MYB_LIKE,Myb-like domain;
SANT,SANT domain; no description,Homeodomain-like; SANT
,NODE_2027_length_1049_cov_112.840797.path1.1
(262 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11450.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding doma... 266 8e-72
AT5G06110.2 | Symbols: | DnaJ domain ;Myb-like DNA-binding doma... 266 8e-72
AT5G06110.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding doma... 266 8e-72
AT5G45420.1 | Symbols: | Duplicated homeodomain-like superfamil... 91 1e-18
>AT3G11450.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding domain
| chr3:3605459-3607402 REVERSE LENGTH=647
Length = 647
Score = 266 bits (681), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/264 (56%), Positives = 182/264 (68%), Gaps = 13/264 (4%)
Query: 1 MSLDIEHLRGLCEKMEDRKELEQAEVIRDAL-SCKEGMADVKYEKTIQQNGSIKANGSRG 59
MSL+ E L+ LC+KM +++ LE A+VI+D S + A+ K + + + NG +
Sbjct: 395 MSLNTEQLQNLCDKMGNKEGLELAKVIKDGCNSSRNDEAESKEKVSKKTNGGTEPTTRVS 454
Query: 60 SKSKTEKREKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVDEIMKATKTVLL 119
+ ++++PWSKEEI++LRKGM KYPKGTSRRWEVISEYIGTGRSV+EI+KATKTVLL
Sbjct: 455 QLDSSTQKKQPWSKEEIDMLRKGMIKYPKGTSRRWEVISEYIGTGRSVEEILKATKTVLL 514
Query: 120 QKPDSSKAFDAFLEKRKPAVSIASPLTTREEV-EGAPTNPETGKPENSDASSKKDNLEDS 178
QKPDS+KAFD+FLEKRKP+ SI SPL+TREE+ E PT T ++A K+ +
Sbjct: 515 QKPDSAKAFDSFLEKRKPSASITSPLSTREELGESLPTMTTT-----TNAKPSKETVVGK 569
Query: 179 QGKSTDDQNSTAVAANGVXXXXXDQDIWSAVQERALVQALKAFPKEASQRWERVAAAVPG 238
S N NG D D WS VQERALVQALK FPKE SQRWERVAAAVPG
Sbjct: 570 SSSSQSSDN------NGEVGGSSDADSWSTVQERALVQALKTFPKETSQRWERVAAAVPG 623
Query: 239 KTVNQCKKKFTAMKESFRNKKGAV 262
KT+NQCKKKF +KE RNKK V
Sbjct: 624 KTMNQCKKKFAELKEIIRNKKTGV 647
>AT5G06110.2 | Symbols: | DnaJ domain ;Myb-like DNA-binding domain
| chr5:1841009-1843000 REVERSE LENGTH=663
Length = 663
Score = 266 bits (681), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 188/271 (69%), Gaps = 17/271 (6%)
Query: 1 MSLDIEHLRGLCEKMEDRKELEQAEVIRDALSCKEGMAD---------VKYEKTIQQNGS 51
MSL+ E LR LC+KME+++ + A+VI++ + + + VK I+ NG
Sbjct: 395 MSLNTEQLRKLCDKMENKEGMALAKVIKNGSNIDDDKIEIEEEEVQVAVKQNGHIEANGH 454
Query: 52 IKANGSRGSKSKT---EKREKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVD 108
++ANG +K T EK+EKPWSKEEI++LRKG K+PKGTS+RWEVISEYIGTGRSV+
Sbjct: 455 VEANGHVEAKVDTATHEKKEKPWSKEEIDMLRKGTTKFPKGTSQRWEVISEYIGTGRSVE 514
Query: 109 EIMKATKTVLLQKPDSSKAFDAFLEKRKPAVSIASPLTTREEVEGAPTNPETGKPENSDA 168
EI+KATKTVLLQKPDS+KAFD+FLE RKPA SI SPL+TREE+ G P P +N+
Sbjct: 515 EILKATKTVLLQKPDSAKAFDSFLENRKPAASINSPLSTREEL-GEPIIPTKAHEDNN-- 571
Query: 169 SSKKDNLEDSQGKSTDDQNSTAVAANGVXXXXXDQDIWSAVQERALVQALKAFPKEASQR 228
S+K + E Q T + N++ + D D WSAVQERALVQALK FPKE +QR
Sbjct: 572 STKTETAE--QNGKTKENNNSNGNSEPAAASGSDPDGWSAVQERALVQALKTFPKETNQR 629
Query: 229 WERVAAAVPGKTVNQCKKKFTAMKESFRNKK 259
WERVA AVPGKT+NQCKKKF +K+ R KK
Sbjct: 630 WERVATAVPGKTMNQCKKKFADLKDVIRTKK 660
>AT5G06110.1 | Symbols: | DnaJ domain ;Myb-like DNA-binding domain
| chr5:1841009-1843000 REVERSE LENGTH=663
Length = 663
Score = 266 bits (681), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 188/271 (69%), Gaps = 17/271 (6%)
Query: 1 MSLDIEHLRGLCEKMEDRKELEQAEVIRDALSCKEGMAD---------VKYEKTIQQNGS 51
MSL+ E LR LC+KME+++ + A+VI++ + + + VK I+ NG
Sbjct: 395 MSLNTEQLRKLCDKMENKEGMALAKVIKNGSNIDDDKIEIEEEEVQVAVKQNGHIEANGH 454
Query: 52 IKANGSRGSKSKT---EKREKPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVD 108
++ANG +K T EK+EKPWSKEEI++LRKG K+PKGTS+RWEVISEYIGTGRSV+
Sbjct: 455 VEANGHVEAKVDTATHEKKEKPWSKEEIDMLRKGTTKFPKGTSQRWEVISEYIGTGRSVE 514
Query: 109 EIMKATKTVLLQKPDSSKAFDAFLEKRKPAVSIASPLTTREEVEGAPTNPETGKPENSDA 168
EI+KATKTVLLQKPDS+KAFD+FLE RKPA SI SPL+TREE+ G P P +N+
Sbjct: 515 EILKATKTVLLQKPDSAKAFDSFLENRKPAASINSPLSTREEL-GEPIIPTKAHEDNN-- 571
Query: 169 SSKKDNLEDSQGKSTDDQNSTAVAANGVXXXXXDQDIWSAVQERALVQALKAFPKEASQR 228
S+K + E Q T + N++ + D D WSAVQERALVQALK FPKE +QR
Sbjct: 572 STKTETAE--QNGKTKENNNSNGNSEPAAASGSDPDGWSAVQERALVQALKTFPKETNQR 629
Query: 229 WERVAAAVPGKTVNQCKKKFTAMKESFRNKK 259
WERVA AVPGKT+NQCKKKF +K+ R KK
Sbjct: 630 WERVATAVPGKTMNQCKKKFADLKDVIRTKK 660
>AT5G45420.1 | Symbols: | Duplicated homeodomain-like superfamily
protein | chr5:18405668-18406597 REVERSE LENGTH=309
Length = 309
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 43/191 (22%)
Query: 69 KPWSKEEIELLRKGMQKYPKGTSRRWEVISEYIGTGRSVDEIMKATKTVLLQKPDSSKAF 128
K W+ EEIE+L+K + K+P G RWE ++ G + ++K K + +K S +
Sbjct: 158 KDWTAEEIEILKKQLIKHPAGKPGRWETVASAFGGRYKTENVIKKAKEIGEKKIYESDDY 217
Query: 129 DAFLEKRKPAVSIASPLTTREEVEGAPTNPETGKPENSDASSKKDNLEDSQGKSTDDQNS 188
FL+ RK AS +E E ENS A D++G
Sbjct: 218 AQFLKNRK-----ASDPRLVDENE-----------ENSGAGG------DAEGT------- 248
Query: 189 TAVAANGVXXXXXDQDIWSAVQERALVQALKAFPKEASQRWERVAAAVPGKTVNQCKKKF 248
++IWS ++ AL+ ALKAFPKEA+ RWE++AAAVPGK+ C K+
Sbjct: 249 --------------KEIWSNGEDIALLNALKAFPKEAAMRWEKIAAAVPGKSKAACMKRV 294
Query: 249 TAMKESFRNKK 259
T +K+ FR+ K
Sbjct: 295 TELKKGFRSSK 305