Miyakogusa Predicted Gene

Lj4g3v2691830.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2691830.1 Non Chatacterized Hit- tr|F6GTE0|F6GTE0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,53.42,8e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; COBRA,Glycosyl-phosphatidyl inositol-anch,gene.g57271.t1.1
         (295 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02210.1 | Symbols: COBL1 | COBRA-like protein 1 precursor | ...   187   9e-48
AT1G09790.1 | Symbols: COBL6 | COBRA-like protein 6 precursor | ...   186   1e-47
AT3G29810.1 | Symbols: COBL2 | COBRA-like protein 2 precursor | ...   181   5e-46
AT5G60920.1 | Symbols: COB | COBRA-like extracellular glycosyl-p...   176   1e-44
AT5G15630.1 | Symbols: COBL4, IRX6 | COBRA-like extracellular gl...   175   3e-44
AT5G60950.1 | Symbols: COBL5 | COBRA-like protein 5 precursor | ...   118   4e-27
AT4G16120.1 | Symbols: ATSEB1, COBL7, SEB1 | COBRA-like protein-...    58   8e-09
AT5G49270.1 | Symbols: SHV2, DER9, MRH4, COBL9 | COBRA-like extr...    55   8e-08
AT4G27110.1 | Symbols: COBL11 | COBRA-like protein 11 precursor ...    52   4e-07
AT3G16860.1 | Symbols: COBL8 | COBRA-like protein 8 precursor | ...    50   2e-06

>AT3G02210.1 | Symbols: COBL1 | COBRA-like protein 1 precursor |
           chr3:409352-411478 REVERSE LENGTH=452
          Length = 452

 Score =  187 bits (474), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 92/203 (45%), Positives = 122/203 (60%), Gaps = 10/203 (4%)

Query: 21  PSHGYDTLDPSGNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVI 80
           PS  YD LDPSGNITV WD ++  GD +   V++YNFQ +RH++ PGW LGWSW   EVI
Sbjct: 30  PSEAYDPLDPSGNITVKWDIITWTGDGYVATVTVYNFQQYRHIQAPGWTLGWSWAKREVI 89

Query: 81  WSMTGAEATEQGNCTRFRQKQPHCCEKEPAIIDLMPGAPYNMQSANCCKGGVLTSMTQDV 140
           W M G + TEQG+C++F+   PHCC+K P+++DL+PG+PYN Q ANCC+GGVL S  QD 
Sbjct: 90  WGMNGGQTTEQGDCSKFKGTIPHCCKKTPSVVDLLPGSPYNQQIANCCRGGVLNSWAQDP 149

Query: 141 TKYGATFLMNYQKSSISFPDGGNFSMPEKFTLGI--PGYSCAMPVQVPPTRFT-NDGRRW 197
               + F +   ++  +        +P+ FTL    PGY+C+    V PTRF   D RR 
Sbjct: 150 ATAVSAFQLTVGQAGTT---NKTVRVPKNFTLKAPGPGYTCSPAKIVKPTRFIGTDKRRV 206

Query: 198 QQVLDDTGMFWGLQYYNDMLLAH 220
            Q L    M W +       LA 
Sbjct: 207 TQAL----MTWNVTCTYSQFLAQ 225



 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 56/74 (75%)

Query: 201 LDDTGMFWGLQYYNDMLLAHGDNGNVQTELLLHKDQGDFTFRGGWAFPRKISFDGDACVM 260
           ++DTG+ WG+++YND+L+  G  GNVQ+ELL  K+   FTF  GWAFPR+I F+GD CVM
Sbjct: 356 INDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVM 415

Query: 261 PLPDEYPRLPNTAS 274
           P PD YP LPNT S
Sbjct: 416 PPPDSYPWLPNTGS 429


>AT1G09790.1 | Symbols: COBL6 | COBRA-like protein 6 precursor |
           chr1:3168568-3170819 REVERSE LENGTH=454
          Length = 454

 Score =  186 bits (473), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/182 (51%), Positives = 114/182 (62%), Gaps = 8/182 (4%)

Query: 24  GYDTLDPSGNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWSM 83
           GYD LDP G I + WD L  +     V+V++ N Q +RHVE+PGWKL W W   EVIW M
Sbjct: 35  GYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDM 94

Query: 84  TGAEATEQGNCTRFRQ--KQPHCCEKEPAIIDLMPGAPYNMQSANCCKGGVLTSMTQDVT 141
            GAE TEQGNC+ F      PHCC + P I+DL+PGA  N+Q ANCC+GGVLTSM+QD  
Sbjct: 95  KGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHA 154

Query: 142 KYGATFLMNYQKSSISFPDG-GNFSMPEKFTLGIPGYSCAMPVQVPPTRFTND-GRRWQQ 199
            + + F M    S    PDG   F+MP  F +G+PGYSC     V PT+F+ D GRR  Q
Sbjct: 155 NHVSAFHMTVGSS----PDGPEEFNMPSNFDIGVPGYSCDNATSVSPTKFSTDKGRRKTQ 210

Query: 200 VL 201
            L
Sbjct: 211 AL 212



 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 62/74 (83%)

Query: 197 WQQVLDDTGMFWGLQYYNDMLLAHGDNGNVQTELLLHKDQGDFTFRGGWAFPRKISFDGD 256
           +Q  ++DTGMFWG+Q+YND+LL  G  GNVQTELLL KD G+FTFR GWAFPR+I F+GD
Sbjct: 350 YQNSINDTGMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGD 409

Query: 257 ACVMPLPDEYPRLP 270
            CVMP PD++PRLP
Sbjct: 410 ECVMPSPDDFPRLP 423


>AT3G29810.1 | Symbols: COBL2 | COBRA-like protein 2 precursor |
           chr3:11728212-11730158 FORWARD LENGTH=441
          Length = 441

 Score =  181 bits (459), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 6/182 (3%)

Query: 23  HGYDTLDPSGNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWS 82
             YD LDP GNIT+ WD +S  GD +   V+I+NFQ +RH+E PGW+LGWSW   EVIWS
Sbjct: 27  EAYDALDPYGNITIKWDIMSWTGDGYVAVVTIFNFQQYRHIEAPGWQLGWSWMKKEVIWS 86

Query: 83  MTGAEATEQGNCTRFRQKQPHCCEKEPAIIDLMPGAPYNMQSANCCKGGVLTSMTQDVTK 142
           M G +ATEQG+C++F+   PHCC+K PAI+DL+PG PYN Q +NCC+GGV+++  QD   
Sbjct: 87  MVGGQATEQGDCSKFKGNIPHCCKKTPAIVDLLPGTPYNQQISNCCRGGVISAWAQDPAT 146

Query: 143 YGATFLMNYQKSSISFPDGGNFSMPEKFTLGI--PGYSCAMPVQVPPTRFTN-DGRRWQQ 199
             ++F ++  +S  +         P   TL    PGY+C     V P+RF + D RR  Q
Sbjct: 147 AISSFQISVGQSGTT---NTTVRAPRNITLKAPGPGYTCGPAKLVKPSRFISADKRRKTQ 203

Query: 200 VL 201
            L
Sbjct: 204 SL 205



 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 45/80 (56%), Positives = 56/80 (70%)

Query: 201 LDDTGMFWGLQYYNDMLLAHGDNGNVQTELLLHKDQGDFTFRGGWAFPRKISFDGDACVM 260
           ++DT M WG+++YND L   G  GNVQ+ELL  K+  +FTF  GWAFPR+I F+GD CVM
Sbjct: 347 INDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVM 406

Query: 261 PLPDEYPRLPNTASIAATRP 280
           P PD YP LPN +   AT P
Sbjct: 407 PPPDSYPWLPNASPNIATSP 426


>AT5G60920.1 | Symbols: COB | COBRA-like extracellular
           glycosyl-phosphatidyl inositol-anchored protein family |
           chr5:24511466-24513932 REVERSE LENGTH=456
          Length = 456

 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 10/202 (4%)

Query: 22  SHGYDTLDPSGNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIW 81
           +  YD LDP GNIT+ WD +S   D +   V+++NFQ +RH++ PGW LGW W   EVIW
Sbjct: 34  TEAYDALDPEGNITMKWDVMSWTPDGYVAVVTMFNFQKYRHIQSPGWTLGWKWAKKEVIW 93

Query: 82  SMTGAEATEQGNCTRFRQKQPHCCEKEPAIIDLMPGAPYNMQSANCCKGGVLTSMTQDVT 141
           SM GA+ TEQG+C++++   PHCC+K+P ++DL+PG PYN Q ANCCKGGV+ S  QD  
Sbjct: 94  SMVGAQTTEQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVMNSWVQDPA 153

Query: 142 KYGATFLMNYQKSSISFPDGGNFSMPEKFTL--GIPGYSCAMPVQVPPTRF-TNDGRRWQ 198
              ++F ++   +  +        +P  FTL    PGY+C     V PT+F T D RR  
Sbjct: 154 TAASSFQISVGAAGTT---NKTVRVPRNFTLMGPGPGYTCGPAKIVRPTKFVTTDTRRTT 210

Query: 199 QVLDDTGMFWGLQYYNDMLLAH 220
           Q +    M W +       LA 
Sbjct: 211 QAM----MTWNITCTYSQFLAQ 228



 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 45/74 (60%), Positives = 53/74 (71%)

Query: 201 LDDTGMFWGLQYYNDMLLAHGDNGNVQTELLLHKDQGDFTFRGGWAFPRKISFDGDACVM 260
           L+DT M WG+++YND L   G  GNVQ+E+L  KDQ  FTF  GWAFPR+I F+GD CVM
Sbjct: 361 LNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVM 420

Query: 261 PLPDEYPRLPNTAS 274
           P PD YP LPN  S
Sbjct: 421 PPPDSYPFLPNGGS 434


>AT5G15630.1 | Symbols: COBL4, IRX6 | COBRA-like extracellular
           glycosyl-phosphatidyl inositol-anchored protein family |
           chr5:5084842-5086545 FORWARD LENGTH=431
          Length = 431

 Score =  175 bits (444), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 120/200 (60%), Gaps = 10/200 (5%)

Query: 24  GYDTLDPSGNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWSM 83
            YD LDPSGNIT+ WD +S   D +   V++ NFQ++RH++ PGW LGW+W   EVIWSM
Sbjct: 20  AYDPLDPSGNITIKWDIMSWTADGYVATVTMNNFQIYRHIQNPGWTLGWTWAKKEVIWSM 79

Query: 84  TGAEATEQGNCTRFRQKQPHCCEKEPAIIDLMPGAPYNMQSANCCKGGVLTSMTQDVTKY 143
            GA+ TEQG+C++F+   PHCC+K P ++DL+PG PYN Q +NCCKGGV+ +  QD +  
Sbjct: 80  VGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVIGAWGQDPSAA 139

Query: 144 GATFLMNYQKSSISFPDGGNFSMPEKFTL--GIPGYSCAMPVQVPPTRF-TNDGRRWQQV 200
            + F ++   + ++        +P+ FTL    PGY+C     VP T F T D RR  Q 
Sbjct: 140 VSQFQVS---AGLAGTTNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTVFLTTDKRRKTQA 196

Query: 201 LDDTGMFWGLQYYNDMLLAH 220
           L    M W +       LA 
Sbjct: 197 L----MTWNVTCTYSQFLAR 212



 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 60/73 (82%)

Query: 201 LDDTGMFWGLQYYNDMLLAHGDNGNVQTELLLHKDQGDFTFRGGWAFPRKISFDGDACVM 260
           ++DTGMF+G ++YND+L+  G +GNVQ+E+LL KDQ  FTF+ GWAFPRK+ F+GD C++
Sbjct: 339 INDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECML 398

Query: 261 PLPDEYPRLPNTA 273
           P PD YP LPN+A
Sbjct: 399 PPPDSYPFLPNSA 411


>AT5G60950.1 | Symbols: COBL5 | COBRA-like protein 5 precursor |
           chr5:24527157-24528005 REVERSE LENGTH=204
          Length = 204

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 64/167 (38%), Positives = 86/167 (51%), Gaps = 13/167 (7%)

Query: 32  GNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWSMTGAEATEQ 91
           GNITV WD L+   D +   V+ YN+Q  R +  PGWK+ W     EVIW+M GA+ T Q
Sbjct: 30  GNITVKWDLLNWTPDGYVAVVTAYNYQKQRSI--PGWKMSWRGTKKEVIWNMLGAKTTGQ 87

Query: 92  GNCTRFRQKQPHCCEKEPAIIDLMPGAPYNMQSANCCKGGVLTSMTQDVTKYGATFLMNY 151
           G C+ F+   P  C ++P ++DL+PG P+N Q ANCCK GVL   ++   +       N 
Sbjct: 88  GGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLKPGSESAFQLSVGSAGNS 147

Query: 152 QKSSISFPDGGNFSMPEKFTLGIPG--YSCAMPVQVPPTRFTNDGRR 196
            K++          MP  F    P   Y C     V PTRFT   +R
Sbjct: 148 VKTA---------RMPANFMFTAPKQQYICGPSKNVRPTRFTTADKR 185


>AT4G16120.1 | Symbols: ATSEB1, COBL7, SEB1 | COBRA-like protein-7
           precursor | chr4:9116591-9119138 REVERSE LENGTH=661
          Length = 661

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 22/179 (12%)

Query: 32  GNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWSMTGA--EAT 89
           G++T+ +D +      +  +V++ N      ++   WKL + W  DE I++M GA     
Sbjct: 217 GDLTIMYDVVRSYSSNYMAQVTMENHNPLGRLDN--WKLSFDWMRDEFIYTMKGAYPSIV 274

Query: 90  EQGNCTRFRQKQPH---------CCEKEPAIIDLMPGAPYNMQSAN----CCKGGVLTSM 136
           +  +C    Q + +          C + P +IDL P   YN  +      CC+ G +   
Sbjct: 275 DSSDCVDGPQAKHYQDLDFSNVLSCARRPTVIDL-PPTKYNDSTFGLIPFCCRNGTILPR 333

Query: 137 TQDVTKYGATFLMNYQKSSISFPDGGNFSMPEKFTLG---IPGYSCAMPVQVPPTRFTN 192
           + D +K  + F M   K      +    S P+ + +     P Y C  PV+V P++F +
Sbjct: 334 SMDPSKSSSVFQMQVYKMPPDL-NISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVD 391


>AT5G49270.1 | Symbols: SHV2, DER9, MRH4, COBL9 | COBRA-like
           extracellular glycosyl-phosphatidyl inositol-anchored
           protein family | chr5:19972021-19974398 REVERSE
           LENGTH=663
          Length = 663

 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 22/177 (12%)

Query: 32  GNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWSMTGAEAT-- 89
           G++T+ +D +      +  +V++ N      ++   W+L + W  DE I  M GA  T  
Sbjct: 216 GDLTIMYDVIRAYDQNYLTEVTMENHNPLGRLDH--WELSFDWMRDEFIQKMQGAYPTVV 273

Query: 90  EQGNCTRFRQKQPH---------CCEKEPAIIDLMPGAPYNMQSAN---CCKGGVLTSMT 137
           +   C    Q   +          CE+ P IIDL P    +    N   CC+ G +    
Sbjct: 274 DATKCIFGPQSLIYTGLDFADVLTCERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRI 333

Query: 138 QDVTKYGATFLMNYQKSSISFPDGGNFSMPE----KFTLGIPGYSCAMPVQVPPTRF 190
            D +K  + F M   K    F     F  P+    K TL  P YSC  PV+V PT +
Sbjct: 334 MDPSKSVSVFTMQVAKMPPDFNRSALFP-PQNWRIKGTLN-PDYSCGPPVRVTPTFY 388


>AT4G27110.1 | Symbols: COBL11 | COBRA-like protein 11 precursor |
           chr4:13599236-13601521 REVERSE LENGTH=668
          Length = 668

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 32/182 (17%)

Query: 32  GNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWSMTGAEATEQ 91
           G++ + +D L     ++  +V+I N      ++   W L W W   E I SM GA A E+
Sbjct: 219 GDLNIIYDVLQAYASSYMAQVTIDNTSPLGRLDH--WNLTWEWMRGEFIHSMRGAYAAEK 276

Query: 92  GNCTRFRQK-----------QPHCCEKEPAIIDLMPGAPYNMQSAN-------CCKGGVL 133
                   K           Q   C+K+P I DL    P   +  N       CCK G L
Sbjct: 277 NTLECLSSKAGQFYGDLDFSQVANCQKKPIIKDL----PAERKDDNVTGKLPFCCKNGTL 332

Query: 134 TSMTQDVTKYGATFLMNYQKSSISFPDGGN--FSMPEKFTL-GI--PGYSCAMPVQVPPT 188
                D +K  A F +   K     PD     F  P  + + GI  P Y C  P++V  T
Sbjct: 333 LPTHMDPSKSKAIFQLQVYKVP---PDQNRTAFFPPRNWKIDGIVNPTYKCGPPIRVDAT 389

Query: 189 RF 190
            F
Sbjct: 390 PF 391


>AT3G16860.1 | Symbols: COBL8 | COBRA-like protein 8 precursor |
           chr3:5759643-5762104 REVERSE LENGTH=653
          Length = 653

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 38/185 (20%)

Query: 32  GNITVTWDFLSDNGDTFDVKVSIYNFQLFRHVEEPGWKLGWSWRGDEVIWSMTGA--EAT 89
           G++T+ +D       ++  +V+I N  L   ++   W L + W  DE ++S  GA     
Sbjct: 210 GDLTIMYDVTRAYQSSYSAQVTIENHNLLGRLDN--WDLSFMWMKDEFLFSTKGAYPSVV 267

Query: 90  EQGNCTRFRQKQPH---------CCEKEPAIIDLMPGAPYNMQSAN----CCKGGVLTSM 136
           +  +C    Q + +          C + P IIDL P   YN  +      CC+ G +   
Sbjct: 268 DSSDCITGPQAKYYKDLDFSNVMSCARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPR 326

Query: 137 TQDVTKYGATFLMNYQK-------SSISFPDG----GNFSMPEKFTLGIPGYSCAMPVQV 185
           + D  K  + F +   K       SSI+ P      GN +         P Y C  P++V
Sbjct: 327 SMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLN---------PDYKCGPPLRV 377

Query: 186 PPTRF 190
             ++F
Sbjct: 378 SSSQF 382