Miyakogusa Predicted Gene

Lj4g3v2689680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2689680.1 tr|A3IMC5|A3IMC5_9CHRO Acetolactate synthase
small subunit OS=Cyanothece sp. CCY0110
GN=CY0110_28084,60.71,0.0000000004,Q9SMC2_NICPL_Q9SMC2;,NULL;
Q9SMC2_NICPL_Q9SMC2;,NULL; ACETOLACTATE SYNTHASE III, REGULATORY
SUBUNIT,,CUFF.51461.1
         (272 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31810.3 | Symbols:  | ACT domain-containing small subunit of...   422   e-119
AT2G31810.1 | Symbols:  | ACT domain-containing small subunit of...   422   e-118
AT2G31810.2 | Symbols:  | ACT domain-containing small subunit of...   400   e-112
AT5G16290.2 | Symbols: VAT1 | VALINE-TOLERANT 1 | chr5:5333874-5...   391   e-109
AT5G16290.1 | Symbols: VAT1 | VALINE-TOLERANT 1 | chr5:5333874-5...   391   e-109

>AT2G31810.3 | Symbols:  | ACT domain-containing small subunit of
           acetolactate synthase protein | chr2:13524271-13528246
           FORWARD LENGTH=469
          Length = 469

 Score =  422 bits (1086), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 197/272 (72%), Positives = 237/272 (87%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQLQKLANVLKVEDL 60
           MINRIAGVFARRG+NIESLAVGLN DKALFTIVV GTE VL+QV+EQLQKL NVLKVED+
Sbjct: 99  MINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQLQKLVNVLKVEDI 158

Query: 61  SNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAVQR 120
           S+EPQVERELML+KV+A P++RAE+ WLVD FRA++VDI+EH++TIEVTGDPGK++AV+R
Sbjct: 159 SSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEVTGDPGKMIAVER 218

Query: 121 NLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKPAINALVGVKNRNPVDK 180
           NL KF I+EI RTGKIALRREKMGA+APFWR+SAASYPDL+ +  ++ L   K    V +
Sbjct: 219 NLKKFQIREIVRTGKIALRREKMGATAPFWRFSAASYPDLKEQAPVSVLRSSKKGAIVPQ 278

Query: 181 NDAPVGGDVYPIEPPDSFTVTQVLDAHWGVLNDEDTSGIRSHTLSMLVNDVPGVLNVVTG 240
            +   GGDVYP+EP     V ++LDAHWG+L DEDTSG+RSHTLS+LVND+PGVLN+VTG
Sbjct: 279 KETSAGGDVYPVEPFFDPKVHRILDAHWGLLTDEDTSGLRSHTLSLLVNDIPGVLNIVTG 338

Query: 241 VFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           VF+RRGYNIQSLAVGH+E +GISR+TTV+P T
Sbjct: 339 VFARRGYNIQSLAVGHAETKGISRITTVIPAT 370



 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 27/160 (16%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKAL--FTIVVSGTETVLRQVVEQLQKLANVLKVE 58
           ++N + GVFARRG+NI+SLAVG  E K +   T V+  T+  + ++V+QL KL +V +V 
Sbjct: 332 VLNIVTGVFARRGYNIQSLAVGHAETKGISRITTVIPATDESVSKLVQQLYKLVDVHEVH 391

Query: 59  DLSNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAV 118
           DL++ P  ERELMLIK+      R ++  +  IFRAK VD+S+H++T++V          
Sbjct: 392 DLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLQV---------- 441

Query: 119 QRNLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYP 158
                       ARTG++AL RE  G  + + R    S+P
Sbjct: 442 ------------ARTGRVALARES-GVDSKYLR--GYSFP 466



 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)

Query: 217 SGIRSHTLSMLVNDVPGVLNVVTGVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           S +R HT+S+ V D  G++N + GVF+RRGYNI+SLAVG +  + +   T VV GT
Sbjct: 82  SKVRKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKAL--FTIVVCGT 135


>AT2G31810.1 | Symbols:  | ACT domain-containing small subunit of
           acetolactate synthase protein | chr2:13524271-13528246
           FORWARD LENGTH=491
          Length = 491

 Score =  422 bits (1086), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 197/272 (72%), Positives = 237/272 (87%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQLQKLANVLKVEDL 60
           MINRIAGVFARRG+NIESLAVGLN DKALFTIVV GTE VL+QV+EQLQKL NVLKVED+
Sbjct: 99  MINRIAGVFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQLQKLVNVLKVEDI 158

Query: 61  SNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAVQR 120
           S+EPQVERELML+KV+A P++RAE+ WLVD FRA++VDI+EH++TIEVTGDPGK++AV+R
Sbjct: 159 SSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEVTGDPGKMIAVER 218

Query: 121 NLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKPAINALVGVKNRNPVDK 180
           NL KF I+EI RTGKIALRREKMGA+APFWR+SAASYPDL+ +  ++ L   K    V +
Sbjct: 219 NLKKFQIREIVRTGKIALRREKMGATAPFWRFSAASYPDLKEQAPVSVLRSSKKGAIVPQ 278

Query: 181 NDAPVGGDVYPIEPPDSFTVTQVLDAHWGVLNDEDTSGIRSHTLSMLVNDVPGVLNVVTG 240
            +   GGDVYP+EP     V ++LDAHWG+L DEDTSG+RSHTLS+LVND+PGVLN+VTG
Sbjct: 279 KETSAGGDVYPVEPFFDPKVHRILDAHWGLLTDEDTSGLRSHTLSLLVNDIPGVLNIVTG 338

Query: 241 VFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           VF+RRGYNIQSLAVGH+E +GISR+TTV+P T
Sbjct: 339 VFARRGYNIQSLAVGHAETKGISRITTVIPAT 370



 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/160 (45%), Positives = 109/160 (68%), Gaps = 5/160 (3%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKAL--FTIVVSGTETVLRQVVEQLQKLANVLKVE 58
           ++N + GVFARRG+NI+SLAVG  E K +   T V+  T+  + ++V+QL KL +V +V 
Sbjct: 332 VLNIVTGVFARRGYNIQSLAVGHAETKGISRITTVIPATDESVSKLVQQLYKLVDVHEVH 391

Query: 59  DLSNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAV 118
           DL++ P  ERELMLIK+      R ++  +  IFRAK VD+S+H++T+++TGD  K+VA+
Sbjct: 392 DLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLQLTGDLDKMVAL 451

Query: 119 QRNLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYP 158
           QR L  +GI E+ARTG++AL RE  G  + + R    S+P
Sbjct: 452 QRLLEPYGICEVARTGRVALARES-GVDSKYLR--GYSFP 488



 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 2/56 (3%)

Query: 217 SGIRSHTLSMLVNDVPGVLNVVTGVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           S +R HT+S+ V D  G++N + GVF+RRGYNI+SLAVG +  + +   T VV GT
Sbjct: 82  SKVRKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRDKAL--FTIVVCGT 135


>AT2G31810.2 | Symbols:  | ACT domain-containing small subunit of
           acetolactate synthase protein | chr2:13524419-13528246
           FORWARD LENGTH=421
          Length = 421

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/266 (71%), Positives = 230/266 (86%), Gaps = 1/266 (0%)

Query: 8   VFARRGFNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQLQKLANVLKVEDLSNEPQVE 67
           VFARRG+NIESLAVGLN DKALFTIVV GTE VL+QV+EQLQKL NVLKVED+S+EPQVE
Sbjct: 35  VFARRGYNIESLAVGLNRDKALFTIVVCGTERVLQQVIEQLQKLVNVLKVEDISSEPQVE 94

Query: 68  RELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAVQRNLSKFGI 127
           RELML+KV+A P++RAE+ WLVD FRA++VDI+EH++TIEVTGDPGK++AV+RNL KF I
Sbjct: 95  RELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEVTGDPGKMIAVERNLKKFQI 154

Query: 128 KEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKPAINALVGVKNRNPVDKNDAPVGG 187
           +EI RTGKIALRREKMGA+APFWR+SAASYPDL+ +  ++ L   K    V + +   GG
Sbjct: 155 REIVRTGKIALRREKMGATAPFWRFSAASYPDLKEQAPVSVLRSSKKGAIVPQKETSAGG 214

Query: 188 DVYPIEPPDSFTVTQVLDAHWGVLNDEDTSGIRSHTLSMLVNDVPGVLNVVTGVFSRRGY 247
           DVYP+EP     V ++LDAHWG+L DEDTSG+RSHTLS+LVND+PGVLN+VTGVF+RRGY
Sbjct: 215 DVYPVEPFFDPKVHRILDAHWGLLTDEDTSGLRSHTLSLLVNDIPGVLNIVTGVFARRGY 274

Query: 248 NIQS-LAVGHSEVEGISRLTTVVPGT 272
           NIQ+ LAVGH+E +GISR+TTV+P T
Sbjct: 275 NIQAYLAVGHAETKGISRITTVIPAT 300



 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/161 (44%), Positives = 109/161 (67%), Gaps = 6/161 (3%)

Query: 1   MINRIAGVFARRGFNIES-LAVGLNEDKAL--FTIVVSGTETVLRQVVEQLQKLANVLKV 57
           ++N + GVFARRG+NI++ LAVG  E K +   T V+  T+  + ++V+QL KL +V +V
Sbjct: 261 VLNIVTGVFARRGYNIQAYLAVGHAETKGISRITTVIPATDESVSKLVQQLYKLVDVHEV 320

Query: 58  EDLSNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVA 117
            DL++ P  ERELMLIK+      R ++  +  IFRAK VD+S+H++T+++TGD  K+VA
Sbjct: 321 HDLTHLPFSERELMLIKIAVNAAARRDVLDIASIFRAKAVDVSDHTITLQLTGDLDKMVA 380

Query: 118 VQRNLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYP 158
           +QR L  +GI E+ARTG++AL RE  G  + + R    S+P
Sbjct: 381 LQRLLEPYGICEVARTGRVALARES-GVDSKYLR--GYSFP 418


>AT5G16290.2 | Symbols: VAT1 | VALINE-TOLERANT 1 |
           chr5:5333874-5337387 FORWARD LENGTH=477
          Length = 477

 Score =  391 bits (1004), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/273 (71%), Positives = 229/273 (83%), Gaps = 4/273 (1%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQLQKLANVLKVEDL 60
           +INRIAGVFARRG+NIESLAVGLNEDKALFTIVV GT+ VL+QVVEQL KL NV+KVEDL
Sbjct: 89  IINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQLNKLVNVIKVEDL 148

Query: 61  SNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAVQR 120
           S EP VERELMLIK++A+P  R+E+ WLVDIFRAKIVD SE S+TIEVTGDPGK+VA+  
Sbjct: 149 SKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTIEVTGDPGKMVALTT 208

Query: 121 NLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKPAINALVGVKNRNPVDK 180
           NL KFGIKEIARTGKIALRREKMG +APFWR+SAASYP L  K + +  V  K +  +  
Sbjct: 209 NLEKFGIKEIARTGKIALRREKMGETAPFWRFSAASYPHLV-KESSHETVAEKTKLALTG 267

Query: 181 N-DAPVGGDVYPIEPPDSFTVTQVLDAHWGVLNDEDTSGIRSHTLSMLVNDVPGVLNVVT 239
           N +A  GGDVYP+EP + F    VLDAHWG++ DED+SG+RSHTLS+LV +VPGVLN++T
Sbjct: 268 NGNASSGGDVYPVEPYNDF--KPVLDAHWGMVYDEDSSGLRSHTLSLLVANVPGVLNLIT 325

Query: 240 GVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           G  SRRGYNIQSLAVG +E EG+SR+TTV+PGT
Sbjct: 326 GAISRRGYNIQSLAVGPAEKEGLSRITTVIPGT 358



 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 108/156 (69%), Gaps = 4/156 (2%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKAL--FTIVVSGTETVLRQVVEQLQKLANVLKVE 58
           ++N I G  +RRG+NI+SLAVG  E + L   T V+ GT+  + ++V QLQKL ++ +++
Sbjct: 320 VLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDENIDKLVRQLQKLIDLQEIQ 379

Query: 59  DLSNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAV 118
           ++++ P  ERELMLIKV A+   R ++  +  +FRAK +D+S+H++T+EVTGD  K+ A+
Sbjct: 380 NITHMPFAERELMLIKVAADTSARRDVLDIAQVFRAKAIDVSDHTITLEVTGDLRKMSAL 439

Query: 119 QRNLSKFGIKEIARTGKIALRREKMGASAPFWR-YS 153
           Q  L  +GI E+ARTG++AL RE  G  + + R YS
Sbjct: 440 QTQLEAYGICEVARTGRVALVRES-GVDSTYLRGYS 474



 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 21/102 (20%)

Query: 190 YPIEPPDSFTVTQVLDA----HWGVLNDEDTSG---------------IRSHTLSMLVND 230
           +P + P+S  V Q++D     +  VL+   T                 +R HT+S+ V D
Sbjct: 26  FPAKTPNSLQVNQIIDGRKMRNATVLSAASTDKAITTAQSVAPTACDRVRRHTISVFVGD 85

Query: 231 VPGVLNVVTGVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
             G++N + GVF+RRGYNI+SLAVG +E + +   T VV GT
Sbjct: 86  ESGIINRIAGVFARRGYNIESLAVGLNEDKAL--FTIVVLGT 125


>AT5G16290.1 | Symbols: VAT1 | VALINE-TOLERANT 1 |
           chr5:5333874-5337387 FORWARD LENGTH=477
          Length = 477

 Score =  391 bits (1004), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/273 (71%), Positives = 229/273 (83%), Gaps = 4/273 (1%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKALFTIVVSGTETVLRQVVEQLQKLANVLKVEDL 60
           +INRIAGVFARRG+NIESLAVGLNEDKALFTIVV GT+ VL+QVVEQL KL NV+KVEDL
Sbjct: 89  IINRIAGVFARRGYNIESLAVGLNEDKALFTIVVLGTDKVLQQVVEQLNKLVNVIKVEDL 148

Query: 61  SNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAVQR 120
           S EP VERELMLIK++A+P  R+E+ WLVDIFRAKIVD SE S+TIEVTGDPGK+VA+  
Sbjct: 149 SKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTIEVTGDPGKMVALTT 208

Query: 121 NLSKFGIKEIARTGKIALRREKMGASAPFWRYSAASYPDLEGKPAINALVGVKNRNPVDK 180
           NL KFGIKEIARTGKIALRREKMG +APFWR+SAASYP L  K + +  V  K +  +  
Sbjct: 209 NLEKFGIKEIARTGKIALRREKMGETAPFWRFSAASYPHLV-KESSHETVAEKTKLALTG 267

Query: 181 N-DAPVGGDVYPIEPPDSFTVTQVLDAHWGVLNDEDTSGIRSHTLSMLVNDVPGVLNVVT 239
           N +A  GGDVYP+EP + F    VLDAHWG++ DED+SG+RSHTLS+LV +VPGVLN++T
Sbjct: 268 NGNASSGGDVYPVEPYNDF--KPVLDAHWGMVYDEDSSGLRSHTLSLLVANVPGVLNLIT 325

Query: 240 GVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
           G  SRRGYNIQSLAVG +E EG+SR+TTV+PGT
Sbjct: 326 GAISRRGYNIQSLAVGPAEKEGLSRITTVIPGT 358



 Score =  131 bits (329), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 69/156 (44%), Positives = 108/156 (69%), Gaps = 4/156 (2%)

Query: 1   MINRIAGVFARRGFNIESLAVGLNEDKAL--FTIVVSGTETVLRQVVEQLQKLANVLKVE 58
           ++N I G  +RRG+NI+SLAVG  E + L   T V+ GT+  + ++V QLQKL ++ +++
Sbjct: 320 VLNLITGAISRRGYNIQSLAVGPAEKEGLSRITTVIPGTDENIDKLVRQLQKLIDLQEIQ 379

Query: 59  DLSNEPQVERELMLIKVHAEPQNRAELKWLVDIFRAKIVDISEHSVTIEVTGDPGKLVAV 118
           ++++ P  ERELMLIKV A+   R ++  +  +FRAK +D+S+H++T+EVTGD  K+ A+
Sbjct: 380 NITHMPFAERELMLIKVAADTSARRDVLDIAQVFRAKAIDVSDHTITLEVTGDLRKMSAL 439

Query: 119 QRNLSKFGIKEIARTGKIALRREKMGASAPFWR-YS 153
           Q  L  +GI E+ARTG++AL RE  G  + + R YS
Sbjct: 440 QTQLEAYGICEVARTGRVALVRES-GVDSTYLRGYS 474



 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 21/102 (20%)

Query: 190 YPIEPPDSFTVTQVLDA----HWGVLNDEDTSG---------------IRSHTLSMLVND 230
           +P + P+S  V Q++D     +  VL+   T                 +R HT+S+ V D
Sbjct: 26  FPAKTPNSLQVNQIIDGRKMRNATVLSAASTDKAITTAQSVAPTACDRVRRHTISVFVGD 85

Query: 231 VPGVLNVVTGVFSRRGYNIQSLAVGHSEVEGISRLTTVVPGT 272
             G++N + GVF+RRGYNI+SLAVG +E + +   T VV GT
Sbjct: 86  ESGIINRIAGVFARRGYNIESLAVGLNEDKAL--FTIVVLGT 125