Miyakogusa Predicted Gene

Lj4g3v2689670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2689670.1 Non Chatacterized Hit- tr|I1P231|I1P231_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,64.71,2e-19,no
description,NULL; ANKYRIN-KINASE,NULL; SERINE-THREONINE PROTEIN
KINASE,NULL,CUFF.51456.1
         (68 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43850.2 | Symbols:  | Integrin-linked protein kinase family ...   123   3e-29
AT2G43850.1 | Symbols:  | Integrin-linked protein kinase family ...   123   3e-29
AT3G59830.1 | Symbols:  | Integrin-linked protein kinase family ...   115   7e-27
AT2G31800.1 | Symbols:  | Integrin-linked protein kinase family ...   111   1e-25
AT4G18950.1 | Symbols:  | Integrin-linked protein kinase family ...    57   2e-09
AT3G58760.1 | Symbols:  | Integrin-linked protein kinase family ...    53   5e-08

>AT2G43850.2 | Symbols:  | Integrin-linked protein kinase family |
           chr2:18159517-18161984 REVERSE LENGTH=479
          Length = 479

 Score =  123 bits (308), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 61/68 (89%)

Query: 1   MCLERKRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFTQVIVRLDKIVANCSKQGWWK 60
           MCLE KRP FK K++SYPPD+KELIE+CW PE  +RPTF+++I+RLDKIVANCSKQGWWK
Sbjct: 412 MCLEGKRPVFKTKSRSYPPDIKELIEKCWHPEAGIRPTFSEIIIRLDKIVANCSKQGWWK 471

Query: 61  DTFKLPWK 68
           DTFK PWK
Sbjct: 472 DTFKFPWK 479


>AT2G43850.1 | Symbols:  | Integrin-linked protein kinase family |
           chr2:18159517-18161984 REVERSE LENGTH=479
          Length = 479

 Score =  123 bits (308), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 61/68 (89%)

Query: 1   MCLERKRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFTQVIVRLDKIVANCSKQGWWK 60
           MCLE KRP FK K++SYPPD+KELIE+CW PE  +RPTF+++I+RLDKIVANCSKQGWWK
Sbjct: 412 MCLEGKRPVFKTKSRSYPPDIKELIEKCWHPEAGIRPTFSEIIIRLDKIVANCSKQGWWK 471

Query: 61  DTFKLPWK 68
           DTFK PWK
Sbjct: 472 DTFKFPWK 479


>AT3G59830.1 | Symbols:  | Integrin-linked protein kinase family |
           chr3:22103006-22105323 REVERSE LENGTH=477
          Length = 477

 Score =  115 bits (288), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 58/68 (85%)

Query: 1   MCLERKRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFTQVIVRLDKIVANCSKQGWWK 60
           +C+E KRP  + K+KSYPP+LKELIEECW PE  VRP F+++I+RLDKIV NCSKQGWWK
Sbjct: 410 ICIEGKRPTIRTKSKSYPPELKELIEECWHPEISVRPIFSEIIIRLDKIVTNCSKQGWWK 469

Query: 61  DTFKLPWK 68
           DTFK PWK
Sbjct: 470 DTFKFPWK 477


>AT2G31800.1 | Symbols:  | Integrin-linked protein kinase family |
           chr2:13520605-13523646 REVERSE LENGTH=476
          Length = 476

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 57/68 (83%)

Query: 1   MCLERKRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFTQVIVRLDKIVANCSKQGWWK 60
           MCLE +RP FK K+KS P +++ELIEECWD E  VRPTF+++IVRLDKI  +CSKQGWWK
Sbjct: 409 MCLEGRRPSFKAKSKSCPQEMRELIEECWDTETFVRPTFSEIIVRLDKIFVHCSKQGWWK 468

Query: 61  DTFKLPWK 68
           DTFK PWK
Sbjct: 469 DTFKFPWK 476


>AT4G18950.1 | Symbols:  | Integrin-linked protein kinase family |
           chr4:10375685-10378129 FORWARD LENGTH=459
          Length = 459

 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 5   RKRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFTQVIVRLDKIVANCSKQGWWK 60
           + RP FK  +K+YP  LK LIEECW  +P  RPTF ++I RL+ I+ +   +  W+
Sbjct: 372 KHRPLFKAPSKNYPHGLKTLIEECWHEKPAKRPTFREIIKRLESILHHMGHKRQWR 427


>AT3G58760.1 | Symbols:  | Integrin-linked protein kinase family |
           chr3:21728756-21731740 FORWARD LENGTH=471
          Length = 471

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 36/58 (62%)

Query: 3   LERKRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFTQVIVRLDKIVANCSKQGWWK 60
           +E +RP F   TKSYP  L+ELI++CWD E   RPTF  +I  L+ I    +++  WK
Sbjct: 381 IEDERPPFNAPTKSYPFGLQELIQDCWDKEASKRPTFRVIISTLELISDRIARKRSWK 438