Miyakogusa Predicted Gene
- Lj4g3v2668540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2668540.1 Non Chatacterized Hit- tr|I1N4S0|I1N4S0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42549
PE,23.47,3e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; no description,Tetratricopeptide-like,CUFF.51443.1
(505 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 353 2e-97
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 345 6e-95
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 332 4e-91
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 331 8e-91
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 330 1e-90
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 3e-90
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 328 4e-90
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 328 5e-90
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 9e-90
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 325 3e-89
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 325 4e-89
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 5e-89
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 322 3e-88
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 322 6e-88
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 6e-88
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 5e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 7e-87
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 3e-85
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 4e-85
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 7e-85
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 310 2e-84
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 309 2e-84
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 8e-84
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 8e-84
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 8e-83
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 302 3e-82
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 3e-82
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 4e-82
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 7e-82
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 300 2e-81
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 300 2e-81
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 9e-81
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 4e-80
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 8e-80
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 8e-80
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 9e-80
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 293 3e-79
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 292 3e-79
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 5e-79
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 6e-79
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 6e-79
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 1e-78
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 289 3e-78
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 7e-78
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 4e-77
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 283 3e-76
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 5e-76
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 6e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 8e-76
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 8e-76
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 281 1e-75
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 280 2e-75
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 3e-75
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 278 5e-75
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 9e-75
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 2e-74
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 9e-74
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 274 1e-73
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 1e-73
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 273 2e-73
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 3e-73
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 5e-73
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 270 2e-72
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 267 1e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 2e-71
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 4e-71
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 7e-71
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 264 1e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 5e-70
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 6e-70
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 261 8e-70
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 2e-69
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 256 3e-68
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 7e-68
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 5e-67
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 6e-67
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 245 6e-65
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 241 9e-64
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 9e-63
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 236 3e-62
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 5e-62
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 5e-61
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 1e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 227 2e-59
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 2e-59
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 224 8e-59
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 3e-57
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 4e-55
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 212 5e-55
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 210 2e-54
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 4e-54
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 207 9e-54
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 4e-53
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 203 3e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 198 6e-51
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 4e-49
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 5e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 96 4e-20
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 92 8e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 91 2e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 89 1e-17
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 88 1e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 8e-17
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 2e-16
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 5e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 82 6e-16
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 9e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 81 2e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 5e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 2e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 74 2e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 74 2e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 73 5e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 72 7e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 71 2e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 9e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 5e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 7e-11
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 9e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 59 9e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 56 7e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G28420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 280/487 (57%), Gaps = 7/487 (1%)
Query: 1 MRGVSRRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVD 57
+R S L+ + D +Y LL C + + HA ++ D + L++
Sbjct: 44 LRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLN 103
Query: 58 KYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNR 117
Y LE ARKVF+K+ RD W +I GY+ +AL +++M G +PN
Sbjct: 104 MYA--KCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE 177
+T V+KA AER GH +HG VKCG D ++ VG+AL+ Y + ++ ++ VF+
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 178 MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIH 237
+ R+ VSWN++I+G+ + A+ LF M R D P + + ++ A + +
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLR--DGFRPSHFSYASLFGACSSTGFLE 279
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
G W+H Y++K+G KL G+ L+ +YA G I AR IFDR++ R + WN+++ Y
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA 357
HG +EA+ F+++ G+RP+ + FL +L+ACSH+G+L +GW ++ M+ G+
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAW 399
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL 417
HY +VDLLGRAGDL +A+ FI+ MPI+P ++ ALL ACR+HKN EL + AE +F L
Sbjct: 400 HYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFEL 459
Query: 418 DPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDES 477
DP++ G +VIL +Y G+W DAARVRK ++E+ +KK S VE+E+ F ANDE
Sbjct: 460 DPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDER 519
Query: 478 HPYSAQI 484
HP +I
Sbjct: 520 HPQREEI 526
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 345 bits (884), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 278/481 (57%), Gaps = 10/481 (2%)
Query: 25 HLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVF 83
H +D+++ H ++ G +QDPF+ KL+ Y SD G ++YARKVFDK R ++
Sbjct: 89 HRSSLSDALR-VHRHILDNGSDQDPFLATKLIGMY---SDLGSVDYARKVFDKTRKRTIY 144
Query: 84 CWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERAS----QKGHAI 139
WN + + G E L +Y +M G +R+TY +VLKAC A + KG I
Sbjct: 145 VWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEI 204
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYV 199
H H + G +++ LV YA+ V+ + VF MP R++VSW++MI+ Y NG
Sbjct: 205 HAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKA 264
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
+A+ F +M R +P++ T+V+VL A A A + G IH YI++ G+ + S
Sbjct: 265 FEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS 324
Query: 260 GLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRP 319
L+++Y CG + + + +FDR+ DR + WN++I YG+HG+ ++A+ +F++++ G P
Sbjct: 325 ALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASP 384
Query: 320 DGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEF 378
V F+ +L ACSH G++ +G LF+TM +G+ HYAC+VDLLGRA L +A +
Sbjct: 385 TPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKM 444
Query: 379 IQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQW 438
+Q M +PG V+G+LLG+CRIH N+ELAE + +LF L+P NAG YV+LA +Y +A W
Sbjct: 445 VQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMW 504
Query: 439 QDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKE 498
+ RV+K + ++K G +E+ F + DE +P QI L L M ++
Sbjct: 505 DEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEK 564
Query: 499 A 499
Sbjct: 565 G 565
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 14/295 (4%)
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK 145
N +I+ G +A+ V + ++P++ TY ++ CG + +H H +
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQ----ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 146 CGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLL 205
G D D F+ L+ Y+ V+ +RKVF++ +R I WN++ T G+ ++ + L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 206 FYDMFRHDDIGA-PDNATLVTVLPA-FAQKADIH---AGYWIHCYIVKTGMKLDPNLGSG 260
++ M R IG D T VL A A + ++ G IH ++ + G + +
Sbjct: 166 YWKMNR---IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV--DAGLR 318
L+ +YA G + A +F + R + W+A+I CY +G A EAL F++++
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 319 PDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
P+ V + +L AC+ L QG + + G+ + +V + GR G L+
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 10/206 (4%)
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
+S N +I G + A+ + +P T ++ ++ + +H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVL------SQESSPSQQTYELLILCCGHRSSLSDALRVH 100
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+I+ G DP L + LI +Y++ G + AR +FD+ RTI+VWNA+ R + GH +
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHA----GMLAQGWDLFQTMETYGVAKSEAHY 359
E L ++ ++ G+ D + +L AC + L +G ++ + G +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 360 ACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+VD+ R G + A MP++
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVR 246
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 284/500 (56%), Gaps = 18/500 (3%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGH-EQDPFIVAKLVDKYTLHSDSGLEYAR 71
D F + +L C + + K+ HA + G +++ F+ + LVD Y + + R
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC--NCKQVLSGR 358
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR-CAGTTPNRYTYPFVLKACGAE 130
+VFD + R + WN +I GY+ EAL ++ M AG N T V+ AC
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMI 190
A + AIHG VK GLD D FV N L+ Y++ +++ + ++F +M RD+V+WN+MI
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 191 SGYTTNGYVDDAVLLFYDM---FRHDDIGA------PDNATLVTVLPAFAQKADIHAGYW 241
+GY + + +DA+LL + M R GA P++ TL+T+LP+ A + + G
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
IH Y +K + D +GS L+ +YA CG + M+R +FD+I + + WN II YGMHG+
Sbjct: 539 IHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGN 598
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYA 360
QEA+ + + ++ G++P+ V F+ + +ACSH+GM+ +G +F M+ YGV S HYA
Sbjct: 599 GQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYA 658
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGK-NVYGALLGACRIHKNIELAEFTAEKLFVLDP 419
C+VDLLGRAG +K+A + + MP K + +LLGA RIH N+E+ E A+ L L+P
Sbjct: 659 CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEP 718
Query: 420 NNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHP 479
N A YV+LA +Y AG W A VR+ ++E ++K G S +E KF A D SHP
Sbjct: 719 NVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHP 778
Query: 480 YSAQIFETLQSLDRIMGKEA 499
S ++ L++L M KE
Sbjct: 779 QSEKLSGYLETLWERMRKEG 798
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 183/382 (47%), Gaps = 17/382 (4%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ HA + G E + FI+ LV Y L ++ + RD+ WN V+
Sbjct: 222 KQVHAYGLRKG-ELNSFIINTLVAMYG--KLGKLASSKVLLGSFGGRDLVTWNTVLSSLC 278
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG-LDLDL 152
EAL EM G P+ +T VL AC + G +H +A+K G LD +
Sbjct: 279 QNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENS 338
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
FVG+ALV Y C++V + R+VF+ M R I WN+MI+GY+ N + +A+LLF M
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
+ A ++ T+ V+PA + IH ++VK G+ D + + L+ +Y+ G I
Sbjct: 399 AGLLA-NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD-----------AGLRPDG 321
+A IF ++ DR + WN +I Y H ++AL + ++ + L+P+
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
+ + +L +C+ LA+G ++ +A A + +VD+ + G L+ + +
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 382 MPIQPGKNVYGALLGACRIHKN 403
+P Q + ++ A +H N
Sbjct: 578 IP-QKNVITWNVIIMAYGMHGN 598
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 146/316 (46%), Gaps = 8/316 (2%)
Query: 32 SIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKG 91
SI +Q++ + P+++ T S + A +F S R W +++
Sbjct: 13 SIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQS-RSPEWWIDLLRS 71
Query: 92 YANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD 151
EA+ Y +M G P+ Y +P +LKA + + G IH H K G +D
Sbjct: 72 KVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVD 131
Query: 152 -LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
+ V N LV+ Y KC + A KVF+ + +R+ VSWNS+IS + + A+ F M
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 211 RHDDIGAPDNATLVTVLPA---FAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
D+ P + TLV+V+ A + G +H Y ++ G +L+ + + L+++Y
Sbjct: 192 --DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGK 248
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
G ++ ++ + R + WN ++ + EAL +++V G+ PD +
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 328 LSACSHAGMLAQGWDL 343
L ACSH ML G +L
Sbjct: 309 LPACSHLEMLRTGKEL 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 6/191 (3%)
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIHC 244
W ++ + + +AVL + DM +G PDN +L A A D+ G IH
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIV---LGIKPDNYAFPALLKAVADLQDMELGKQIHA 121
Query: 245 YIVKTGMKLDP-NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
++ K G +D + + L++LY CG +FDRIS+R WN++I +
Sbjct: 122 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWE 181
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
AL F+ ++D + P + +++ACS+ M +G + + + YG+ K E + I
Sbjct: 182 MALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKGELNSFIIN 240
Query: 364 DLLGRAGDLKK 374
L+ G L K
Sbjct: 241 TLVAMYGKLGK 251
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 331 bits (848), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 263/446 (58%), Gaps = 4/446 (0%)
Query: 55 LVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT 114
L+D Y+ D L+ A+ VF ++S R V + +I GYA G EA+ +++EM G +
Sbjct: 337 LLDMYSKCGD--LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
P+ YT VL C R +G +H + L D+FV NAL+ YAKC ++ + V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 175 FNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA 234
F+EM +DI+SWN++I GY+ N Y ++A+ LF ++ + +PD T+ VLPA A +
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLS 513
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
G IH YI++ G D ++ + L+ +YA CG + +A +FD I+ + + W +I
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVA 353
YGMHG +EA+++F Q+ AG+ D + F+ LL ACSH+G++ +GW F M +
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEK 413
+ HYACIVD+L R GDL KA FI++MPI P ++GALL CRIH +++LAE AEK
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 414 LFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGA 473
+F L+P N G YV++A +Y +A +W+ R+RK I + ++K G S +E++ F A
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVA 753
Query: 474 NDESHPYSAQIFETLQSLDRIMGKEA 499
D S+P + I L+ + M +E
Sbjct: 754 GDSSNPETENIEAFLRKVRARMIEEG 779
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 189/366 (51%), Gaps = 7/366 (1%)
Query: 23 LLHLCKTTDSIK--KAHAQVVVG-GHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSA 79
+L LC + S+K K + G G D + +KL YT D L+ A +VFD++
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGD--LKEASRVFDEVKI 157
Query: 80 RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAI 139
WN+++ A G F+ ++ ++ +M +G + YT+ V K+ + R+ G +
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 217
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYV 199
HG +K G VGN+LV+FY K Q V+++RKVF+EM +RD++SWNS+I+GY +NG
Sbjct: 218 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 277
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
+ + +F M D AT+V+V A I G +H VK + +
Sbjct: 278 EKGLSVFVQMLVSGI--EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 260 GLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRP 319
L+ +Y+ CG + A+A+F +SDR++ + ++I Y G A EA+ +F+++ + G+ P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 320 DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFI 379
D +L+ C+ +L +G + + ++ + ++D+ + G +++A
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 380 QSMPIQ 385
M ++
Sbjct: 456 SEMRVK 461
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
R + N+ + + +G +++AV L + D D TL +VL A + G
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWD----IDPRTLCSVLQLCADSKSLKDGK 114
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG 300
+ +I G +D NLGS L +Y NCG + A +FD + WN ++ G
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 301 HAQEALSMFQQLVDAGLRPDGVVFLCL 327
++ +F++++ +G+ D F C+
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTFSCV 201
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/490 (35%), Positives = 276/490 (56%), Gaps = 9/490 (1%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSD 64
+Q V DSF + LL C ++ HAQV G + D F+ L+ Y
Sbjct: 110 MQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRR 169
Query: 65 SGLEYARKVFD--KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
G AR VF+ L R + W ++ YA G EAL ++ +MR P+
Sbjct: 170 LG--SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVS 227
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
VL A + ++G +IH VK GL+++ + +L + YAKC +V ++ +F++M +
Sbjct: 228 VLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPN 287
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
++ WN+MISGY NGY +A+ +F++M D PD ++ + + A AQ + +
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKD--VRPDTISITSAISACAQVGSLEQARSM 345
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
+ Y+ ++ + D + S LI ++A CG + AR +FDR DR + VW+A+I YG+HG A
Sbjct: 346 YEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRA 405
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
+EA+S+++ + G+ P+ V FL LL AC+H+GM+ +GW F M + + + HYAC+
Sbjct: 406 REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV 465
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNA 422
+DLLGRAG L +A E I+ MP+QPG V+GALL AC+ H+++EL E+ A++LF +DP+N
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNT 525
Query: 423 GRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSA 482
G YV L+ +Y A W A VR ++E + K +G S VE+ F D+SHP
Sbjct: 526 GHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585
Query: 483 QIFETLQSLD 492
+I ++ ++
Sbjct: 586 EIERQVEWIE 595
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 204/362 (56%), Gaps = 7/362 (1%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
DSFY L+ +K+ HA+++V G + F++ KL+ + D + +AR+VFD
Sbjct: 21 DSFY-ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGD--ITFARQVFD 77
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK 135
L +F WN +I+GY+ F +AL +Y M+ A +P+ +T+P +LKAC Q
Sbjct: 78 DLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFN--EMPQRDIVSWNSMISGY 193
G +H + G D D+FV N L++ YAKC+ + ++R VF +P+R IVSW +++S Y
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAY 197
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
NG +A+ +F M + D PD LV+VL AF D+ G IH +VK G+++
Sbjct: 198 AQNGEPMEALEIFSQMRKMD--VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEI 255
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+P+L L ++YA CG ++ A+ +FD++ + +WNA+I Y +G+A+EA+ MF +++
Sbjct: 256 EPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI 315
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
+ +RPD + +SAC+ G L Q +++ + + ++D+ + G ++
Sbjct: 316 NKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVE 375
Query: 374 KA 375
A
Sbjct: 376 GA 377
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 276/520 (53%), Gaps = 38/520 (7%)
Query: 14 LRDSFYYT-DLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG--LEYA 70
L + Y T L C + +K+ HA+++ G QD + + K + + + S S L YA
Sbjct: 10 LEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLS-FCISSTSSDFLPYA 68
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
+ VFD D F WN++I+G++ +L +Y M C+ N YT+P +LKAC
Sbjct: 69 QIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNL 128
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMI 190
A ++ IH K G + D++ N+L++ YA + + +F+ +P+ D VSWNS+I
Sbjct: 129 SAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVI 188
Query: 191 SGYTTNGYVDDAVLLFYDMFRHDDIG-----------------------------APDNA 221
GY G +D A+ LF M + I PDN
Sbjct: 189 KGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV 248
Query: 222 TLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRI 281
+L L A AQ + G WIH Y+ KT +++D LG LI +YA CG + A +F I
Sbjct: 249 SLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 282 SDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGW 341
+++ W A+I Y HGH +EA+S F ++ G++P+ + F +L+ACS+ G++ +G
Sbjct: 309 KKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 342 DLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRI 400
+F +ME Y + + HY CIVDLLGRAG L +A FIQ MP++P ++GALL ACRI
Sbjct: 369 LIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRI 428
Query: 401 HKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYS 460
HKNIEL E E L +DP + GRYV A ++ +W AA R+ ++E + K G S
Sbjct: 429 HKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
Query: 461 SVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEAQ 500
++ LE +F A D SHP E +QS RIM ++ +
Sbjct: 489 TISLEGTTHEFLAGDRSHPE----IEKIQSKWRIMRRKLE 524
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 279/484 (57%), Gaps = 12/484 (2%)
Query: 16 DSFYYTDLLHLCKTTD---SIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY-AR 71
D+F + +L C + S ++ H V GG E +PF++ L+ Y GL AR
Sbjct: 52 DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYC---KCGLVADAR 108
Query: 72 KVFDK--LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
KVF++ S++ C+N +I GY +A ++ M+ G + + T ++ C
Sbjct: 109 KVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTV 168
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
G ++HG VK GLD ++ V N+ ++ Y KC VEA R++F+EMP + +++WN++
Sbjct: 169 PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAV 228
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
ISGY+ NG D VL Y+ + + PD TLV+VL + A G+ + +
Sbjct: 229 ISGYSQNGLAYD-VLELYEQMKSSGV-CPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN 286
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
G + + + IS+YA CG ++ ARA+FD + +++ W A+I CYGMHG + L +F
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGR 368
++ G+RPDG VF+ +LSACSH+G+ +G +LF+ M+ Y + HY+C+VDLLGR
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 406
Query: 369 AGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVIL 428
AG L +A+EFI+SMP++P V+GALLGAC+IHKN+++AE K+ +PNN G YV++
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLM 466
Query: 429 AQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETL 488
+ +Y D+ + R+R +RE +K GYS VE + F A D SH + ++ L
Sbjct: 467 SNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRML 526
Query: 489 QSLD 492
L+
Sbjct: 527 DELE 530
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 162/304 (53%), Gaps = 6/304 (1%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
WNV ++ A F+E++++Y M +G++P+ +++PF+LK+C + G +H H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS--WNSMISGYTTNGYVDDA 202
K G + + FV AL+S Y KC V +RKVF E PQ +S +N++ISGYT N V DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 203 VLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
+F R + G D+ T++ ++P + G +H VK G+ + + +
Sbjct: 141 AYMFR---RMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSF 197
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
I++Y CG + R +FD + + + WNA+I Y +G A + L +++Q+ +G+ PD
Sbjct: 198 ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
+ +LS+C+H G G ++ + +E+ G + + + R G+L KA
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 382 MPIQ 385
MP++
Sbjct: 318 MPVK 321
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 329 bits (843), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 277/459 (60%), Gaps = 9/459 (1%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGL-EYARKVFDKLSARDVFCWNVVIKGYANV 95
HA +V G + DPF+ L+ Y S SGL ++A ++FD +DV W +I G+
Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGY---SSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG-LDLDLFV 154
G +EA+ + EM+ G N T VLKA G + G ++HG ++ G + D+F+
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 155 GNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD 214
G++LV Y KC + ++KVF+EMP R++V+W ++I+GY + D +L+F +M + D
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD- 301
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
AP+ TL +VL A A +H G +HCY++K ++++ G+ LI LY CG + A
Sbjct: 302 -VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEA 360
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+F+R+ ++ ++ W A+I + HG+A++A +F ++ + + P+ V F+ +LSAC+H
Sbjct: 361 ILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHG 420
Query: 335 GMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGA 393
G++ +G LF +M+ + + HYAC+VDL GR G L++A I+ MP++P V+GA
Sbjct: 421 GLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGA 480
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
L G+C +HK+ EL ++ A ++ L P+++GRY +LA +Y ++ W + ARVRK +++ +
Sbjct: 481 LFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQV 540
Query: 454 KKPIGYSSVELESGHRKFGANDESHPY-SAQIFETLQSL 491
K G+S +E++ +F A D+ P S +++TL ++
Sbjct: 541 VKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 164/328 (50%), Gaps = 9/328 (2%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALN--VYDEMRCAGTTPNRYTYPFVL 124
YAR++ +L + W+ +I ++ L+ Y MR G P+R+T+P +L
Sbjct: 52 FRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLL 111
Query: 125 KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV 184
KA R S H H VK GLD D FV N+L+S Y+ + + ++F+ +D+V
Sbjct: 112 KAVFKLRDSNP-FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVV 170
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHC 244
+W +MI G+ NG +A++ F +M + A + T+V+VL A + D+ G +H
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTG--VAANEMTVVSVLKAAGKVEDVRFGRSVHG 228
Query: 245 YIVKTG-MKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
++TG +K D +GS L+ +Y C A+ +FD + R + W A+I Y
Sbjct: 229 LYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFD 288
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
+ + +F++++ + + P+ +LSAC+H G L +G + M + + ++
Sbjct: 289 KGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLI 348
Query: 364 DLLGRAGDLKKAVEFIQSMPIQPGKNVY 391
DL + G L++A+ + + KNVY
Sbjct: 349 DLYVKCGCLEEAILVFERL---HEKNVY 373
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 6/236 (2%)
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF--YD 208
DLF+ L + +R++ ++ I W+S+I G+ + G + L F Y
Sbjct: 35 DLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI-GHFSGGITLNRRLSFLAYR 93
Query: 209 MFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC 268
R + + P T +L A + D + + H +IVK G+ DP + + LIS Y++
Sbjct: 94 HMRRNGV-IPSRHTFPPLLKAVFKLRDSNP-FQFHAHIVKFGLDSDPFVRNSLISGYSSS 151
Query: 269 GYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLL 328
G A +FD D+ + W A+I + +G A EA+ F ++ G+ + + + +L
Sbjct: 152 GLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVL 211
Query: 329 SACSHAGMLAQGWDLFQTMETYGVAKSEAHY-ACIVDLLGRAGDLKKAVEFIQSMP 383
A + G + G K + + +VD+ G+ A + MP
Sbjct: 212 KAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 328 bits (842), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 287/485 (59%), Gaps = 11/485 (2%)
Query: 13 VLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLH-SDSGLEYAR 71
V +S Y ++ +++ HA ++V G+ + ++ KL+ TL S + Y
Sbjct: 5 VAANSAAYEAIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLI---TLACSARAIAYTH 61
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAER 131
+F + D F +N VIK + + + Y M + +P+ YT+ V+K+C
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 132 ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMIS 191
A + G +H HAV G LD +V ALV+FY+KC ++E +R+VF+ MP++ IV+WNS++S
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
G+ NG D+A+ +FY M + PD+AT V++L A AQ + G W+H YI+ G+
Sbjct: 182 GFEQNGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
L+ LG+ LI+LY+ CG + AR +FD++ + + W A+I YG HG+ Q+A+ +F +
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 312 LV-DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRA 369
+ D G P+ V F+ +LSAC+HAG++ +G +++ M ++Y + H+ C+VD+LGRA
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 370 GDLKKAVEFIQSMPIQ---PGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYV 426
G L +A +FI + ++ A+LGAC++H+N +L A++L L+P+N G +V
Sbjct: 360 GFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHV 419
Query: 427 ILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFE 486
+L+ +Y +G+ + + +R + N+++K +GYS +E+E+ F DESH + +I+
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYR 479
Query: 487 TLQSL 491
L++L
Sbjct: 480 YLETL 484
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 328 bits (841), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/487 (34%), Positives = 274/487 (56%), Gaps = 35/487 (7%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H V D F+ L+ Y D L+ A KVF + +DV WN +I G+ G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGD--LDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
+AL ++ +M + T VL AC R + G + + + ++++L + N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 157 ALVSFYAKC-------------------------------QEVEASRKVFNEMPQRDIVS 185
A++ Y KC ++ EA+R+V N MPQ+DIV+
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
WN++IS Y NG ++A+++F+++ ++ + TLV+ L A AQ + G WIH Y
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKL-NQITLVSTLSACAQVGALELGRWIHSY 390
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
I K G++++ ++ S LI +Y+ CG + +R +F+ + R +FVW+A+I MHG EA
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVD 364
+ MF ++ +A ++P+GV F + ACSH G++ + LF ME+ YG+ E HYACIVD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR 424
+LGR+G L+KAV+FI++MPI P +V+GALLGAC+IH N+ LAE +L L+P N G
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 425 YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQI 484
+V+L+ +Y G+W++ + +RK +R +KK G SS+E++ +F + D +HP S ++
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKV 630
Query: 485 FETLQSL 491
+ L +
Sbjct: 631 YGKLHEV 637
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/419 (28%), Positives = 212/419 (50%), Gaps = 44/419 (10%)
Query: 20 YTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSA 79
+ L+ C + +K+ H ++ G DP+ +KL L S + LEYARKVFD++
Sbjct: 33 HISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 80 RDVFCWNVVIKGYANVGP-----FAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
+ F WN +I+ YA+ GP L++ E +C PN+YT+PF++KA +
Sbjct: 93 PNSFAWNTLIRAYAS-GPDPVLSIWAFLDMVSESQC---YPNKYTFPFLIKAAAEVSSLS 148
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G ++HG AVK + D+FV N+L+ Y C +++++ KVF + ++D+VSWNSMI+G+
Sbjct: 149 LGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFV 208
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
G D A+ LF M +D+ A + T+V VL A A+ ++ G + YI + + ++
Sbjct: 209 QKGSPDKALELFKKM-ESEDVKA-SHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISD------------------------------- 283
L + ++ +Y CG I A+ +FD + +
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 284 RTIFVWNAIIRCYGMHGHAQEALSMFQQL-VDAGLRPDGVVFLCLLSACSHAGMLAQGWD 342
+ I WNA+I Y +G EAL +F +L + ++ + + + LSAC+ G L G
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 343 LFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIH 401
+ ++ +G+ + + ++ + + GDL+K+ E S+ + V+ A++G +H
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMH 444
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 327 bits (839), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 171/469 (36%), Positives = 275/469 (58%), Gaps = 12/469 (2%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ H Q V G++ D F+ + L+ Y+ + LE ARKVFD++ R++ W +I+GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYS--TCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTY------PFVLKACGAERASQKGHAIHGHAVKCG 147
G +A++++ ++ + + V+ AC A +IH +K G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 148 LDLDLFVGNALVSFYAKCQE--VEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLL 205
D + VGN L+ YAK E V +RK+F+++ +D VS+NS++S Y +G ++A +
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEV 273
Query: 206 FYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY 265
F + + + + + TL TVL A + + G IH +++ G++ D +G+ +I +Y
Sbjct: 274 FRRLVK-NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMY 332
Query: 266 ANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
CG + AR FDR+ ++ + W A+I YGMHGHA +AL +F ++D+G+RP+ + F+
Sbjct: 333 CKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 326 CLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPI 384
+L+ACSHAG+ +GW F M+ +GV HY C+VDLLGRAG L+KA + IQ M +
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKM 452
Query: 385 QPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARV 444
+P ++ +LL ACRIHKN+ELAE + +LF LD +N G Y++L+ +Y DAG+W+D RV
Sbjct: 453 KPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERV 512
Query: 445 RKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDR 493
R ++ + KP G+S +EL F DE HP +I+E L L+R
Sbjct: 513 RMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 160/317 (50%), Gaps = 10/317 (3%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
DVF WN VI A G AEAL + MR P R ++P +KAC + G H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVD 200
A G D+FV +AL+ Y+ C ++E +RKVF+E+P+R+IVSW SMI GY NG
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 201 DAVLLFYDMF----RHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
DAV LF D+ DD D+ LV+V+ A ++ IH +++K G +
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 257 LGSGLISLYANCGY--ISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
+G+ L+ YA G +++AR IFD+I D+ +N+I+ Y G + EA +F++LV
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 315 AGLRP-DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
+ + + +L A SH+G L G + + G+ I+D+ + G ++
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVE 339
Query: 374 KAVEFIQSMPIQPGKNV 390
A + M KNV
Sbjct: 340 TARKAFDRM---KNKNV 353
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/502 (32%), Positives = 278/502 (55%), Gaps = 33/502 (6%)
Query: 19 YYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLS 78
Y+ L K+ + KK +A +++ G Q F+V K+VD D ++YA ++F+++S
Sbjct: 12 YFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIED--MDYATRLFNQVS 69
Query: 79 ARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGH 137
+VF +N +I+ Y + + + + +Y ++ R + P+R+T+PF+ K+C + + G
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGK 129
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
+HGH K G + NAL+ Y K ++ + KVF+EM +RD++SWNS++SGY G
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG 189
Query: 198 YVDDAVLLFY---------------------------DMFRHDDIGA--PDNATLVTVLP 228
+ A LF+ D FR + PD +L++VLP
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 229 AFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV 288
+ AQ + G WIH Y + G + + LI +Y+ CG IS A +F ++ + +
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS 309
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM- 347
W+ +I Y HG+A A+ F ++ A ++P+G+ FL LLSACSH GM +G F M
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMR 369
Query: 348 ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELA 407
+ Y + HY C++D+L RAG L++AVE ++MP++P ++G+LL +CR N+++A
Sbjct: 370 QDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVA 429
Query: 408 EFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESG 467
+ L L+P + G YV+LA +Y D G+W+D +R+RK IR ++KK G S +E+ +
Sbjct: 430 LVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNI 489
Query: 468 HRKFGANDESHPYSAQIFETLQ 489
++F + D S P+ +I LQ
Sbjct: 490 VQEFVSGDNSKPFWTEISIVLQ 511
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 325 bits (833), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 263/459 (57%), Gaps = 5/459 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ H + G + I LVD Y LE AR++FD + R+V WN +I Y
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYA--KCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
EA+ ++ +M G P + L AC ++G IH +V+ GLD ++
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
V N+L+S Y KC+EV+ + +F ++ R +VSWN+MI G+ NG DA+ F M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM--RS 431
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
PD T V+V+ A A+ + H WIH ++++ + + + + L+ +YA CG I +
Sbjct: 432 RTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMI 491
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
AR IFD +S+R + WNA+I YG HG + AL +F+++ ++P+GV FL ++SACSH
Sbjct: 492 ARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
Query: 334 AGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYG 392
+G++ G F M E Y + S HY +VDLLGRAG L +A +FI MP++P NVYG
Sbjct: 552 SGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYG 611
Query: 393 ALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREND 452
A+LGAC+IHKN+ AE AE+LF L+P++ G +V+LA +Y A W+ +VR ++
Sbjct: 612 AMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQG 671
Query: 453 IKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
++K G S VE+++ F + +HP S +I+ L+ L
Sbjct: 672 LRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 175/318 (55%), Gaps = 4/318 (1%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
LL C + +++ V G Q+ F KLV + + ++ A +VF+ + ++
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYG--SVDEAARVFEPIDSKLN 100
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
++ ++KG+A V +AL + MR P Y + ++LK CG E + G IHG
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
VK G LDLF L + YAKC++V +RKVF+ MP+RD+VSWN++++GY+ NG A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
+ + M + P T+V+VLPA + I G IH Y +++G N+ + L+
Sbjct: 221 LEMVKSMCEEN--LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 263 SLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
+YA CG + AR +FD + +R + WN++I Y + + +EA+ +FQ+++D G++P V
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 338
Query: 323 VFLCLLSACSHAGMLAQG 340
+ L AC+ G L +G
Sbjct: 339 SVMGALHACADLGDLERG 356
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 7/269 (2%)
Query: 116 NRYTYP--FVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRK 173
N Y +P +L+ C + + ++ I K GL + F LVS + + V+ + +
Sbjct: 34 NVYEHPAALLLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAAR 90
Query: 174 VFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQK 233
VF + + V +++M+ G+ +D A+ F M R+DD+ P +L +
Sbjct: 91 VFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM-RYDDV-EPVVYNFTYLLKVCGDE 148
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
A++ G IH +VK+G LD +GL ++YA C ++ AR +FDR+ +R + WN I+
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA 353
Y +G A+ AL M + + + L+P + + +L A S +++ G ++ G
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
+VD+ + G L+ A + M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGM 297
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 325 bits (833), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 257/435 (59%), Gaps = 3/435 (0%)
Query: 66 GLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
G++ R+VF+ + +DV +N +I GYA G + +AL + EM P+ +T VL
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
KG IHG+ ++ G+D D+++G++LV YAK +E S +VF+ + RD +S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
WNS+++GY NG ++A+ LF M P +V+PA A A +H G +H Y
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKV--KPGAVAFSSVIPACAHLATLHLGKQLHGY 368
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
+++ G + + S L+ +Y+ CG I AR IFDR++ W AII + +HGH EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVD 364
+S+F+++ G++P+ V F+ +L+ACSH G++ + W F +M + YG+ + HYA + D
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVAD 488
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR 424
LLGRAG L++A FI M ++P +V+ LL +C +HKN+ELAE AEK+F +D N G
Sbjct: 489 LLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGA 548
Query: 425 YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQI 484
YV++ MY G+W++ A++R +R+ ++K S +E+++ F + D SHP +I
Sbjct: 549 YVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKI 608
Query: 485 FETLQSLDRIMGKEA 499
E L+++ M KE
Sbjct: 609 NEFLKAVMEQMEKEG 623
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 192/393 (48%), Gaps = 39/393 (9%)
Query: 74 FDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERAS 133
F L + V W VI+ + + F++AL + EMR +G P+ +P VLK+C
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKC-------------------------QEV 168
+ G ++HG V+ G+D DL+ GNAL++ YAK ++V
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 169 EAS-----------RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA 217
+A R+VF MP++D+VS+N++I+GY +G +DA+ + +M D
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL--K 239
Query: 218 PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAI 277
PD+ TL +VLP F++ D+ G IH Y+++ G+ D +GS L+ +YA I + +
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 278 FDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
F R+ R WN+++ Y +G EAL +F+Q+V A ++P V F ++ AC+H L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 338 AQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLG- 396
G L + G + + +VD+ + G++K A + M + + ++G
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 397 ACRIHKNIELAEFTAEKLFVLDPNNAGRYVILA 429
A H + ++ F K + PN +L
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ H V+ GG + FI + LVD Y+ + ++ ARK+FD+++ D W +I G+A
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGN--IKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC 127
G EA+++++EM+ G PN+ + VL AC
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 322 bits (825), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 277/514 (53%), Gaps = 55/514 (10%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD---SGLEYARKVFDKLSARDVF 83
C+T + + HA + G +D A+++ ++ SD L+YA K+F+++ R+ F
Sbjct: 33 CRTIRDLSQIHAVFIKSGQMRDTLAAAEIL-RFCATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 84 CWNVVIKGYANVGPFAEALNV---YDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
WN +I+G++ + + Y+ M PNR+T+P VLKAC Q+G IH
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKC----------------------------------- 165
G A+K G D FV + LV Y C
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 166 ----------QEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
+ +A+R +F++M QR +VSWN+MISGY+ NG+ DAV +F +M + D
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI- 270
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
P+ TLV+VLPA ++ + G W+H Y +G+++D LGS LI +Y+ CG I A
Sbjct: 271 -RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
+F+R+ + W+A+I + +HG A +A+ F ++ AG+RP V ++ LL+ACSH G
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGG 389
Query: 336 MLAQGWDLFQTMETY-GVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGAL 394
++ +G F M + G+ HY C+VDLLGR+G L +A EFI +MPI+P ++ AL
Sbjct: 390 LVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Query: 395 LGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIK 454
LGACR+ N+E+ + A L + P+++G YV L+ MY G W + + +R ++E DI+
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIR 509
Query: 455 KPIGYSSVELESGHRKFGANDESHPYSAQIFETL 488
K G S ++++ +F D+SHP + +I L
Sbjct: 510 KDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSML 543
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 286/486 (58%), Gaps = 18/486 (3%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYAR 71
DS LL C + H+ + G E + F+ KL+D L+++ G L +
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID---LYAEFGRLRDCQ 302
Query: 72 KVFDKLSARDVFCWNVVIKGYA-NVGPFAEALNVYDEMRCAGTTPNRYTY---PFVLKAC 127
KVFD++ RD+ WN +IK Y N P A++++ EMR + P+ T +L
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPL-RAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 128 GAERASQKGHAIHGHAVKCGLDL-DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
G RA + ++ G ++ G L D+ +GNA+V YAK V+++R VFN +P D++SW
Sbjct: 362 GDIRACR---SVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N++ISGY NG+ +A+ ++ M +I A + T V+VLPA +Q + G +H +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAA-NQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+K G+ LD + + L +Y CG + A ++F +I WN +I C+G HGH ++A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDL 365
+F++++D G++PD + F+ LLSACSH+G++ +G F+ M+T YG+ S HY C+VD+
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
GRAG L+ A++FI+SM +QP +++GALL ACR+H N++L + +E LF ++P + G +
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIF 485
V+L+ MY AG+W+ +R ++K G+SS+E+++ F +++HP +++
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMY 717
Query: 486 ETLQSL 491
L +L
Sbjct: 718 RELTAL 723
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 12/314 (3%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
L C S K HA++VV Q+ I AKLV+ Y + L AR FD + RDV
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVAL--ARHTFDHIQNRDV 117
Query: 83 FCWNVVIKGYANVGPFAEALNVYDE-MRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
+ WN++I GY G +E + + M +G TP+ T+P VLKAC R G+ IH
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHC 174
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
A+K G D++V +L+ Y++ + V +R +F+EMP RD+ SWN+MISGY +G +
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
A+ L + + A D+ T+V++L A + D + G IH Y +K G++ + + + L
Sbjct: 235 ALTL------SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
I LYA G + + +FDR+ R + WN+II+ Y ++ A+S+FQ++ + ++PD
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 322 VVFLCLLSACSHAG 335
+ + L S S G
Sbjct: 349 LTLISLASILSQLG 362
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 182/366 (49%), Gaps = 10/366 (2%)
Query: 20 YTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSA 79
+ +L C+T K H + G D ++ A L+ Y+ + G AR +FD++
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG--NARILFDEMPV 213
Query: 80 RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAI 139
RD+ WN +I GY G EAL + + +R + T +L AC +G I
Sbjct: 214 RDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSV----TVVSLLSACTEAGDFNRGVTI 269
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYV 199
H +++K GL+ +LFV N L+ YA+ + +KVF+ M RD++SWNS+I Y N
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL-DPNLG 258
A+ LF +M R I PD TL+++ +Q DI A + + ++ G L D +G
Sbjct: 330 LRAISLFQEM-RLSRI-QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387
Query: 259 SGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG-L 317
+ ++ +YA G + ARA+F+ + + + WN II Y +G A EA+ M+ + + G +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 318 RPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
+ ++ +L ACS AG L QG L + G+ + D+ G+ G L+ A+
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 378 FIQSMP 383
+P
Sbjct: 508 LFYQIP 513
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 321 bits (823), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 263/438 (60%), Gaps = 7/438 (1%)
Query: 60 TLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRY 118
+L+S G ++ +F + D+ +N +I GY + G +L+++ E+ +G
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323
Query: 119 TYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM 178
T ++ G +AIHG+ +K V AL + Y+K E+E++RK+F+E
Sbjct: 324 TLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
P++ + SWN+MISGYT NG +DA+ LF +M + + +P+ T+ +L A AQ +
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE--FSPNPVTITCILSACAQLGALSL 438
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGM 298
G W+H + T + + + LI +YA CG I+ AR +FD ++ + WN +I YG+
Sbjct: 439 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEA 357
HG QEAL++F +++++G+ P V FLC+L ACSHAG++ +G ++F +M YG S
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL 417
HYAC+VD+LGRAG L++A++FI++M I+PG +V+ LLGACRIHK+ LA +EKLF L
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 418 DPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDES 477
DP+N G +V+L+ ++ + AA VR+ ++ + K GY+ +E+ F + D+S
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS 678
Query: 478 HPYSAQIFETLQSLDRIM 495
HP +I+E L+ L+ M
Sbjct: 679 HPQVKEIYEKLEKLEGKM 696
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 169/321 (52%), Gaps = 8/321 (2%)
Query: 20 YTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLS 78
Y D + + + HAQ+++ G D ++ KL + SD G + YAR +F +
Sbjct: 23 YLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRL---SDLGAIYYARDIFLSVQ 79
Query: 79 ARDVFCWNVVIKGYA-NVGPFAEALNVYDEMR-CAGTTPNRYTYPFVLKACGAERASQKG 136
DVF +NV+++G++ N P + +L+V+ +R PN TY F + A R + G
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHS-SLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAG 138
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
IHG AV G D +L +G+ +V Y K VE +RKVF+ MP++D + WN+MISGY N
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
+++ +F D+ ++ D TL+ +LPA A+ ++ G IH KTG
Sbjct: 199 EMYVESIQVFRDLI-NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+ +G ISLY+ CG I M A+F I +NA+I Y +G + +LS+F++L+ +G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 317 LRPDGVVFLCLLSACSHAGML 337
R + L+ H ++
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLI 338
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 318 bits (815), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 158/436 (36%), Positives = 265/436 (60%), Gaps = 6/436 (1%)
Query: 60 TLHSDSGLEYARKVFDKLSAR-DVFCWNVVIKGYANVGPFAEALNVYDEMRCAG-TTPNR 117
+L S + YA KVF K+ +VF WN +I+GYA +G A ++Y EMR +G P+
Sbjct: 62 SLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDT 121
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE 177
+TYPF++KA + G IH ++ G ++V N+L+ YA C +V ++ KVF++
Sbjct: 122 HTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181
Query: 178 MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIH 237
MP++D+V+WNS+I+G+ NG ++A+ L+ +M + PD T+V++L A A+ +
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
G +H Y++K G+ + + + L+ LYA CG + A+ +FD + D+ W ++I
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 298 MHGHAQEALSMFQQLVDA-GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKS 355
++G +EA+ +F+ + GL P + F+ +L ACSH GM+ +G++ F+ M E Y +
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 356 EAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLF 415
H+ C+VDLL RAG +KKA E+I+SMP+QP ++ LLGAC +H + +LAEF ++
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 419
Query: 416 VLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGAND 475
L+PN++G YV+L+ MY +W D ++RK + + +KK G+S VE+ + +F D
Sbjct: 420 QLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGD 479
Query: 476 ESHPYSAQIFETLQSL 491
+SHP S I+ L+ +
Sbjct: 480 KSHPQSDAIYAKLKEM 495
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 318 bits (814), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 165/467 (35%), Positives = 267/467 (57%), Gaps = 5/467 (1%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H V+ G D +V L++ Y + A +F ++ +DV W+ VI Y G
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYA--KSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
AEAL V+++M GT PN T VL+AC A ++G H A++ GL+ ++ V
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVST 303
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
ALV Y KC E + VF+ +P++D+VSW ++ISG+T NG ++ F M ++
Sbjct: 304 ALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT- 362
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARA 276
PD +V VL + ++ + H Y++K G +P +G+ L+ LY+ CG + A
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASK 422
Query: 277 IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG-LRPDGVVFLCLLSACSHAG 335
+F+ I+ + VW ++I YG+HG +AL F +V + ++P+ V FL +LSACSHAG
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAG 482
Query: 336 MLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGAL 394
++ +G +F+ M Y +A + HYA +VDLLGR GDL A+E + MP P + G L
Sbjct: 483 LIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 542
Query: 395 LGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIK 454
LGACRIH+N E+AE A+KLF L+ N+AG Y++++ +Y G+W++ ++R ++++ IK
Sbjct: 543 LGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIK 602
Query: 455 KPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEAQT 501
K + S +E+ +F A+DE HP ++ L+ LD M ++ +
Sbjct: 603 KGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMKEDLEN 649
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 161/315 (51%), Gaps = 2/315 (0%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
AR++F +++ R ++ WN ++K + + E L + M P+ +T P LKACG
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 130 ERASQKGHAIHGHAVK-CGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
R G IHG K L DL+VG++L+ Y KC + + ++F+E+ + DIV+W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
M+SG+ NG AV F M D+ PD TL+T++ A + ++ G +H ++++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDV-TPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
G D +L + L++ YA A +F I+++ + W+ +I CY +G A EAL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
F ++D G P+ LC+L AC+ A L QG + G+ +VD+ +
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 369 AGDLKKAVEFIQSMP 383
++A +P
Sbjct: 312 CFSPEEAYAVFSRIP 326
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 165 CQEVEAS---RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA 221
C++ +S R++F EM +R + WN+++ + ++ + F MFR ++ PDN
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE--KPDNF 61
Query: 222 TLVTVLPAFAQKADIHAGYWIHCYIVK-TGMKLDPNLGSGLISLYANCGYISMARAIFDR 280
TL L A + +++ G IH ++ K + D +GS LI +Y CG + A +FD
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 281 ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG-LRPDGVVFLCLLSACS 332
+ I W++++ + +G +A+ F+++V A + PD V + L+SAC+
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/518 (32%), Positives = 280/518 (54%), Gaps = 46/518 (8%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
+ + + +L C + + K H+ + D +I + LVD Y+ + A++
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS--KCGNVNDAQR 208
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
VFD++ R+V WN +I + GP EAL+V+ M + P+ T V+ AC + A
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 133 SQKGHAIHGHAVKCG-LDLDLFVGNALVSFYAKCQEVEASRKVFNEMP------------ 179
+ G +HG VK L D+ + NA V YAKC ++ +R +F+ MP
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 180 -------------------QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
+R++VSWN++I+GYT NG ++A+ LF + + + + P +
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC-LLKRESV-CPTH 386
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL------DPNLGSGLISLYANCGYISMA 274
+ +L A A A++H G H +++K G K D +G+ LI +Y CG +
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+F ++ +R WNA+I + +G+ EAL +F++++++G +PD + + +LSAC HA
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 335 GMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGA 393
G + +G F +M +GVA HY C+VDLLGRAG L++A I+ MP+QP ++G+
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
LL AC++H+NI L ++ AEKL ++P+N+G YV+L+ MY + G+W+D VRK++R+ +
Sbjct: 567 LLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGV 626
Query: 454 KKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
K G S ++++ F D+SHP QI L L
Sbjct: 627 TKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDIL 664
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 177/401 (44%), Gaps = 76/401 (18%)
Query: 11 ISVLRDSFYYTDLLHLCKTTD----SIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG 66
+S DS + LL C + ++ HA V+ G + FI +L+D Y+
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYS--KCGS 70
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM------------------ 108
LE R+VFDK+ R+++ WN V+ G +G EA +++ M
Sbjct: 71 LEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQH 130
Query: 109 -RCA------------GTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
RC G N Y++ VL AC KG +H K D+++G
Sbjct: 131 DRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIG 190
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
+ALV Y+KC V +++VF+EM R++VSWNS+I+ + NG +A+ +F M +
Sbjct: 191 SALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML--ESR 248
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTG-MKLDPNLGSGLISLYANCGYISMA 274
PD TL +V+ A A + I G +H +VK ++ D L + + +YA C I A
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEA 308
Query: 275 RAIFD-------------------------------RISDRTIFVWNAIIRCYGMHGHAQ 303
R IFD ++++R + WNA+I Y +G +
Sbjct: 309 RFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENE 368
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACS-----HAGMLAQ 339
EALS+F L + P F +L AC+ H GM A
Sbjct: 369 EALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAH 409
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 30/277 (10%)
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGY 198
+H +K G ++F+ N L+ Y+KC +E R+VF++MPQR+I +WNS+++G T G+
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 199 VDDAVLLFYDM-----------------------------FRHDDIGAPDNATLVTVLPA 229
+D+A LF M H + + + +VL A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 230 FAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVW 289
+ D++ G +H I K+ D +GS L+ +Y+ CG ++ A+ +FD + DR + W
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 290 NAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET 349
N++I C+ +G A EAL +FQ ++++ + PD V ++SAC+ + G ++ +
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 350 YGVAKSEAHYA-CIVDLLGRAGDLKKAVEFIQSMPIQ 385
+++ + VD+ + +K+A SMPI+
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 233 KADIHAGY--WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWN 290
K+ + A Y ++H ++K+G + + + LI Y+ CG + R +FD++ R I+ WN
Sbjct: 31 KSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWN 90
Query: 291 AIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETY 350
+++ G EA S+F+ + + D + ++S + + F M
Sbjct: 91 SVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKE 146
Query: 351 GVAKSEAHYACIVDLLGRAGDLKKAVE 377
G +E +A ++ D+ K V+
Sbjct: 147 GFVLNEYSFASVLSACSGLNDMNKGVQ 173
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 172/501 (34%), Positives = 278/501 (55%), Gaps = 36/501 (7%)
Query: 23 LLHLCKTTDSIKKAHAQVV-VGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARD 81
L H CK+ + K H ++ +G E++PF V++ + L S ++YA K KLS
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPF-VSQTLSFSALSSSGDVDYAYKFLSKLSDPP 72
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
+ WN VI+G++N ++++VY +M G P+ TYPF++K+ + G ++H
Sbjct: 73 NYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHC 132
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP---------------------- 179
VK GL+ DLF+ N L+ Y ++ ++RK+F+EMP
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 180 ---------QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAF 230
+RD+V+W+SMI GY G + A+ +F M R A + T+V+V+ A
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKA-NEVTMVSVICAC 251
Query: 231 AQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR--ISDRTIFV 288
A ++ G +H YI+ + L L + LI +YA CG I A ++F R + + +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
WNAII HG +E+L +F ++ ++ + PD + FLCLL+ACSH G++ + W F++++
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAE 408
G HYAC+VD+L RAG +K A +FI MPI+P ++ GALL C H N+ELAE
Sbjct: 372 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAE 431
Query: 409 FTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGH 468
+KL L P+N GRYV LA +Y Q++ A +R+A+ + +KK G+S ++L+
Sbjct: 432 TVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTR 491
Query: 469 RKFGANDESHPYSAQIFETLQ 489
+F A+D++H +S +I+ LQ
Sbjct: 492 HRFIAHDKTHFHSDKIYAVLQ 512
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 311 bits (797), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/473 (33%), Positives = 262/473 (55%), Gaps = 4/473 (0%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHS--DSGLEYARKVFDKLSAR 80
LL C D K+ HA+ + A V HS ++ + YA +F +
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
F +N +I+GY NV F EAL Y+EM G P+ +TYP +LKAC ++ ++G IH
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVD 200
G K GL+ D+FV N+L++ Y +C E+E S VF ++ + SW+SM+S G
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSG 260
+ +LLF M ++ A ++ +V+ L A A ++ G IH ++++ +L+ + +
Sbjct: 216 ECLLLFRGMCSETNLKAEESG-MVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS 274
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
L+ +Y CG + A IF ++ R ++A+I +HG + AL MF +++ GL PD
Sbjct: 275 LVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPD 334
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTMETYG-VAKSEAHYACIVDLLGRAGDLKKAVEFI 379
VV++ +L+ACSH+G++ +G +F M G V + HY C+VDLLGRAG L++A+E I
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETI 394
Query: 380 QSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQ 439
QS+PI+ ++ L CR+ +NIEL + A++L L +N G Y++++ +Y W
Sbjct: 395 QSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWD 454
Query: 440 DAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLD 492
D AR R I +K+ G+S VEL+ +F + D SHP +I++ L ++
Sbjct: 455 DVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQME 507
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 276/533 (51%), Gaps = 51/533 (9%)
Query: 5 SRRLQQISVLRDSFYYTDLLHLCKT--TDSI-KKAHAQVVVGGHEQDPFIVAKLVDKYTL 61
SR + D+ ++L C + T S+ K+ H V Q+ F+ LVD Y
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA- 275
Query: 62 HSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR------------ 109
++ A VF +S +DV WN ++ GY+ +G F +A+ ++++M+
Sbjct: 276 -KCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 110 -----------------------CAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKC 146
+G PN T VL C + A G IH +A+K
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 147 GLDL-------DLFVGNALVSFYAKCQEVEASRKVFNEMP--QRDIVSWNSMISGYTTNG 197
+DL + V N L+ YAKC++V+ +R +F+ + +RD+V+W MI GY+ +G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL 257
+ A+ L +MF D P+ T+ L A A A + G IH Y ++ P
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 258 GSG-LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
S LI +YA CG IS AR +FD + + W +++ YGMHG+ +EAL +F ++ G
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKA 375
+ DGV L +L ACSH+GM+ QG + F M+T +GV+ HYAC+VDLLGRAG L A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 376 VEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDA 435
+ I+ MP++P V+ A L CRIH +EL E+ AEK+ L N+ G Y +L+ +Y +A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 436 GQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETL 488
G+W+D R+R +R +KK G S VE G F D++HP++ +I++ L
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 188/376 (50%), Gaps = 11/376 (2%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARD- 81
+H CKT +K H +++ G + + L+ Y S L +A + + D
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFG-ILTLNLTSHLISTYI--SVGCLSHAVSLLRRFPPSDA 90
Query: 82 -VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
V+ WN +I+ Y + G + L ++ M TP+ YT+PFV KACG + + G + H
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVD 200
++ G ++FVGNALV+ Y++C+ + +RKVF+EM D+VSWNS+I Y G
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 201 DAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
A+ +F M ++ G PDN TLV VLP A G +HC+ V + M + +G+
Sbjct: 211 VALEMFSRM--TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 260 GLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRP 319
L+ +YA CG + A +F +S + + WNA++ Y G ++A+ +F+++ + ++
Sbjct: 269 CLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 320 DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE-- 377
D V + +S + G+ + + + M + G+ +E ++ G L E
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 378 -FIQSMPIQPGKNVYG 392
+ PI KN +G
Sbjct: 389 CYAIKYPIDLRKNGHG 404
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 167/485 (34%), Positives = 275/485 (56%), Gaps = 8/485 (1%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
D + +T L+ + ++ AH +V +D L+ Y S +E A+K+FD
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAH-KVFDKSPHRDVVSYTALIKGYA--SRGYIENAQKLFD 224
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK 135
++ +DV WN +I GYA G + EAL ++ +M P+ T V+ AC + +
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
G +H G +L + NAL+ Y+KC E+E + +F +P +D++SWN++I GYT
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK--TGMKL 253
+A+LLF +M R + P++ T++++LPA A I G WIH YI K G+
Sbjct: 345 MNLYKEALLLFQEMLRSGE--TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTN 402
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+L + LI +YA CG I A +F+ I +++ WNA+I + MHG A + +F ++
Sbjct: 403 ASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR 462
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDL 372
G++PD + F+ LLSACSH+GML G +F+TM + Y + HY C++DLLG +G
Sbjct: 463 KIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLF 522
Query: 373 KKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMY 432
K+A E I M ++P ++ +LL AC++H N+EL E AE L ++P N G YV+L+ +Y
Sbjct: 523 KEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIY 582
Query: 433 EDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLD 492
AG+W + A+ R + + +KK G SS+E++S +F D+ HP + +I+ L+ ++
Sbjct: 583 ASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 642
Query: 493 RIMGK 497
++ K
Sbjct: 643 VLLEK 647
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 204/394 (51%), Gaps = 36/394 (9%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD-SGLEYARKVFDKLSARD 81
LLH CKT S++ HAQ++ G + ++KL++ L GL YA VF + +
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
+ WN + +G+A AL +Y M G PN YT+PFVLK+C +A ++G IHG
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVE------------------------ASR----- 172
H +K G DLDL+V +L+S Y + +E ASR
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 173 --KVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAF 230
K+F+E+P +D+VSWN+MISGY G +A+ LF DM + + PD +T+VTV+ A
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN--VRPDESTMVTVVSAC 276
Query: 231 AQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWN 290
AQ I G +H +I G + + + LI LY+ CG + A +F+R+ + + WN
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 291 AIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG-W-DLFQTME 348
+I Y +EAL +FQ+++ +G P+ V L +L AC+H G + G W ++
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
GV + + ++D+ + GD++ A + S+
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/466 (35%), Positives = 253/466 (54%), Gaps = 30/466 (6%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
+E ARKVFD+ RD+ WN +I GY +G +A+ VY M G P+ T ++ +
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C +G + + + GL + + + NAL+ ++KC ++ +R++F+ + +R IVSW
Sbjct: 267 CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSW 326
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDI-----------------------------GA 217
+MISGY G +D + LF DM D +
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 218 PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAI 277
PD T++ L A +Q + G WIH YI K + L+ LG+ L+ +YA CG IS A ++
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 278 FDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
F I R + AII +HG A A+S F +++DAG+ PD + F+ LLSAC H GM+
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 338 AQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLG 396
G D F M++ + + HY+ +VDLLGRAG L++A ++SMP++ V+GALL
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLF 566
Query: 397 ACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKP 456
CR+H N+EL E A+KL LDP+++G YV+L MY +A W+DA R R+ + E ++K
Sbjct: 567 GCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKI 626
Query: 457 IGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEAQTL 502
G SS+E+ +F D+S P S +I++ L L R M L
Sbjct: 627 PGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSVL 672
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 208/419 (49%), Gaps = 37/419 (8%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
LL CK +K+ AQ+++ G DPF ++L+ L L+Y+ K+ + ++
Sbjct: 59 LLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNI 118
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMR---CAGTTPNRYTYPFVLKACGAERASQKGHAI 139
F WNV I+G++ E+ +Y +M C + P+ +TYP + K C R S GH I
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYV 199
GH +K L+L V NA + +A C ++E +RKVF+E P RD+VSWN +I+GY G
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
+ A+ + Y + + + PD+ T++ ++ + + D++ G + Y+ + G+++ L +
Sbjct: 239 EKAIYV-YKLMESEGV-KPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVN 296
Query: 260 GLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG------------------- 300
L+ +++ CG I AR IFD + RTI W +I Y G
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 301 ------------HAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
Q+AL++FQ++ + +PD + + LSACS G L G + + +E
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELA 407
Y ++ + A +VD+ + G++ +A+ + + Y A++G +H + A
Sbjct: 417 KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGDASTA 474
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 176/499 (35%), Positives = 270/499 (54%), Gaps = 34/499 (6%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWN 86
C + IK+ H V+ G +Q +I+ KL+ T YAR+V + + R+ F W
Sbjct: 59 CINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWT 118
Query: 87 VVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKC 146
VI+GYA G F EA+ +Y MR TP +T+ +LKACG + G H +
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRL 178
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF 206
++VGN ++ Y KC+ ++ +RKVF+EMP+RD++SW +I+ Y G ++ A LF
Sbjct: 179 RGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF 238
Query: 207 YDMFRHDDI-------GAPDNATLVTVLPAF--AQKADIHA------GYWIHCYIVKTGM 251
+ D + G NA L F +K+ I A GY C +
Sbjct: 239 ESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASK 298
Query: 252 KLD------------PN----LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
D P+ +GS LI +Y+ CG + A +F ++++ +F ++++I
Sbjct: 299 YADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILG 358
Query: 296 YGMHGHAQEALSMFQQLV-DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVA 353
HG AQEAL +F +V ++P+ V F+ L ACSH+G++ QG +F +M +T+GV
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEK 413
+ HY C+VDLLGR G L++A+E I++M ++P V+GALLGACRIH N E+AE AE
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEH 478
Query: 414 LFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGH-RKFG 472
LF L+P+ G Y++L+ +Y AG W RVRK I+E +KK S V ++G KF
Sbjct: 479 LFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFF 538
Query: 473 ANDESHPYSAQIFETLQSL 491
+ +HP S +I + L+ L
Sbjct: 539 PGNLNHPMSNKIQDKLEEL 557
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 260/467 (55%), Gaps = 6/467 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++ HA V G +D + +++D Y+ H D LE R +FD++ D +NVVI Y+
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKH-DRVLE-TRMLFDEMPELDFVSYNVVISSYS 327
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
+ +L+ + EM+C G + + +L + Q G +H A+ D L
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
VGN+LV YAKC+ E + +F +PQR VSW ++ISGY G + LF M R
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKM-RGS 446
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
++ A D +T TVL A A A + G +H +I+++G + GSGL+ +YA CG I
Sbjct: 447 NLRA-DQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKD 505
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
A +F+ + DR WNA+I + +G + A+ F +++++GL+PD V L +L+ACSH
Sbjct: 506 AVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 334 AGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYG 392
G + QG + FQ M YG+ + HYAC++DLLGR G +A + + MP +P + ++
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 393 ALLGACRIHKNIELAEFTAEKLFVLDP-NNAGRYVILAQMYEDAGQWQDAARVRKAIREN 451
++L ACRIHKN LAE AEKLF ++ +A YV ++ +Y AG+W+ V+KA+RE
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 452 DIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKE 498
IKK YS VE+ F +ND++HP +I + L + +E
Sbjct: 686 GIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIERE 732
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 173/376 (46%), Gaps = 9/376 (2%)
Query: 13 VLRDSFYYTDLLHLCKTT---DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY 69
L D +T LL C +++ + HA V G + +PF+ V + L+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A +F+++ +D +N +I GY G + E+++++ +MR +G P+ +T+ VLKA
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
G +H +V G D VGN ++ FY+K V +R +F+EMP+ D VS+N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 190 ISGYTTNGYVDDAVLLFYDM--FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIV 247
IS Y+ + ++ F +M D P T+L A + + G +HC +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFP----FATMLSIAANLSSLQMGRQLHCQAL 378
Query: 248 KTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALS 307
++G+ L+ +YA C A IF + RT W A+I Y G L
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 308 MFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLG 367
+F ++ + LR D F +L A + L G L + G ++ + +VD+
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 368 RAGDLKKAVEFIQSMP 383
+ G +K AV+ + MP
Sbjct: 499 KCGSIKDAVQVFEEMP 514
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 142/319 (44%), Gaps = 8/319 (2%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM--RCAGTTPNRYTYPFVLKAC 127
AR +FD + R V W +++ YA F EA ++ +M + T P+ T+ +L C
Sbjct: 98 ARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 128 GAERASQKGHAIHGHAVKCGLDLDLF--VGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
+H AVK G D + F V N L+ Y + + ++ + +F E+P++D V+
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVT 217
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
+N++I+GY +G +++ LF M + P + T VL A D G +H
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGH--QPSDFTFSGVLKAVVGLHDFALGQQLHAL 275
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
V TG D ++G+ ++ Y+ + R +FD + + +N +I Y + +
Sbjct: 276 SVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEAS 335
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYA-CIVD 364
L F+++ G F +LS ++ L G L A S H +VD
Sbjct: 336 LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL-HCQALLATADSILHVGNSLVD 394
Query: 365 LLGRAGDLKKAVEFIQSMP 383
+ + ++A +S+P
Sbjct: 395 MYAKCEMFEEAELIFKSLP 413
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 2/230 (0%)
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N ++S + K +V ++R +F+ MP R +V+W ++ Y N + D+A LF M R
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP--NLGSGLISLYANCGYISM 273
PD+ T T+LP +A +H + VK G +P + + L+ Y + +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
A +F+ I ++ +N +I Y G E++ +F ++ +G +P F +L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 334 AGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
A G L T G ++ + I+D + + + MP
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 272/476 (57%), Gaps = 12/476 (2%)
Query: 22 DLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKL 77
++L LC ++ K H +++ E D ++ L++ Y S G +E AR+VFD +
Sbjct: 66 EILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAY---SKCGFVELARQVFDGM 122
Query: 78 SARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGH 137
R + WN +I Y +EAL+++ EMR G + +T VL ACG + +
Sbjct: 123 LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK 182
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
+H +VK +DL+L+VG AL+ YAKC ++ + +VF M + V+W+SM++GY N
Sbjct: 183 KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNK 242
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNA-TLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
++A+LL+ R + N TL +V+ A + A + G +H I K+G +
Sbjct: 243 NYEEALLLYR---RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+ S + +YA CG + + IF + ++ + +WN II + H +E + +F+++ G
Sbjct: 300 VASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG 359
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKA 375
+ P+ V F LLS C H G++ +G F+ M T YG++ + HY+C+VD+LGRAG L +A
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 376 VEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDA 435
E I+S+P P +++G+LL +CR++KN+ELAE AEKLF L+P NAG +V+L+ +Y
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAAN 479
Query: 436 GQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
QW++ A+ RK +R+ D+KK G S ++++ F + HP +I TL +L
Sbjct: 480 KQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 535
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 10/296 (3%)
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF--------VLKACGAERASQKGHAI 139
V+ +N + ++V +P RY+ F +L+ C A + A
Sbjct: 24 VLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKAC 83
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYV 199
HG ++ L+ D+ + N L++ Y+KC VE +R+VF+ M +R +VSWN+MI YT N
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
+A+ +F +M R++ + T+ +VL A D +HC VKT + L+ +G+
Sbjct: 144 SEALDIFLEM-RNEGFKFSE-FTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGT 201
Query: 260 GLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRP 319
L+ LYA CG I A +F+ + D++ W++++ Y + + +EAL ++++ L
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 320 DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
+ ++ ACS+ L +G + + G + + VD+ + G L+++
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 304 bits (779), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 264/478 (55%), Gaps = 10/478 (2%)
Query: 20 YTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
Y LL+ C +++ + HA ++ + ++ +L+ Y LE ARKV D+
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYG--KCDCLEDARKVLDE 112
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
+ ++V W +I Y+ G +EAL V+ EM + PN +T+ VL +C G
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
IHG VK D +FVG++L+ YAK +++ +R++F +P+RD+VS ++I+GY
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G ++A+ +F+ + H + +P+ T ++L A + A + G HC++++ +
Sbjct: 233 GLDEEALEMFHRL--HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAV 290
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
L + LI +Y+ CG +S AR +FD + +RT WNA++ Y HG +E L +F+ + D
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 317 -LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET--YGVAKSEAHYACIVDLLGRAGDLK 373
++PD V L +LS CSH M G ++F M YG HY CIVD+LGRAG +
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 374 KAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYE 433
+A EFI+ MP +P V G+LLGACR+H ++++ E +L ++P NAG YVIL+ +Y
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 434 DAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
AG+W D VR + + + K G S ++ E F AND +HP ++ ++ +
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEI 528
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 152/306 (49%), Gaps = 15/306 (4%)
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
G EAL EM G + Y +L AC +RA + G +H H +K ++
Sbjct: 34 GRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLR 90
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
L+ FY KC +E +RKV +EMP++++VSW +MIS Y+ G+ +A+ +F +M R D
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSD-- 148
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
G P+ T TVL + + + + G IH IVK +GS L+ +YA G I AR
Sbjct: 149 GKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAR 208
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
IF+ + +R + AII Y G +EAL MF +L G+ P+ V + LL+A S
Sbjct: 209 EIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLA 268
Query: 336 MLAQGWD-----LFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNV 390
+L G L + + Y V ++ ++D+ + G+L A +MP + +
Sbjct: 269 LLDHGKQAHCHVLRRELPFYAVLQNS-----LIDMYSKCGNLSYARRLFDNMPERTAISW 323
Query: 391 YGALLG 396
L+G
Sbjct: 324 NAMLVG 329
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 292/530 (55%), Gaps = 51/530 (9%)
Query: 4 VSRRLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDK-YTLH 62
+SRR ISVLR CK + HA+++ H+QD F+V +L+ TL
Sbjct: 26 LSRRKTLISVLRS----------CKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLD 75
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
S ++YA VF +S +V+ + +I G+ + G A+ +++Y M P+ Y
Sbjct: 76 S---VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITS 132
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
VLKAC + + IH +K G VG ++ Y K E+ ++K+F+EMP RD
Sbjct: 133 VLKACDLKVCRE----IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRD 188
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYD---------------------------MFRH--- 212
V+ MI+ Y+ G++ +A+ LF D +FR
Sbjct: 189 HVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM 248
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
+++ A + T V VL A + + G W+H ++ M+L +G+ LI++Y+ CG I+
Sbjct: 249 ENVSA-NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDIN 307
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
AR +F + D+ + +N +I MHG + EA++ F+ +V+ G RP+ V + LL+ACS
Sbjct: 308 EARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS 367
Query: 333 HAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVY 391
H G+L G ++F +M+ + V HY CIVDLLGR G L++A FI+++PI+P +
Sbjct: 368 HGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIML 427
Query: 392 GALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREN 451
G LL AC+IH N+EL E A++LF + ++G YV+L+ +Y +G+W+++ +R+++R++
Sbjct: 428 GTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDS 487
Query: 452 DIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMG-KEAQ 500
I+K G S++E+++ +F D +HP+ I++ LQ L+RI+ KE Q
Sbjct: 488 GIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFKENQ 537
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/405 (37%), Positives = 231/405 (57%), Gaps = 7/405 (1%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
++ AR VFD++ RDV W +I GY G AL + M+ G PN T ++
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSV 328
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
CG G +HG AV+ + D+ + +L+S YAKC+ V+ +VF+ + W
Sbjct: 329 CGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPW 388
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
+++I+G N V DA+ LF M R D P+ ATL ++LPA+A AD+ IHCY+
Sbjct: 389 SAIIAGCVQNELVSDALGLFKRMRREDV--EPNIATLNSLLPAYAALADLRQAMNIHCYL 446
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHA 302
KTG + +GL+ +Y+ CG + A IF+ I ++ + +W A+I YGMHG
Sbjct: 447 TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDG 506
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYAC 361
AL +F ++V +G+ P+ + F L+ACSH+G++ +G LF+ M E Y HY C
Sbjct: 507 HNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTC 566
Query: 362 IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNN 421
IVDLLGRAG L +A I ++P +P V+GALL AC H+N++L E A KLF L+P N
Sbjct: 567 IVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPEN 626
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELES 466
G YV+LA +Y G+W+D +VR + ++K G+S++E+ S
Sbjct: 627 TGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 177/336 (52%), Gaps = 15/336 (4%)
Query: 20 YTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
Y LL+ T SI K H V+ GG I++ L Y L + YARK+F++
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGH--ITYARKLFEE 74
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGT--TPNRYTYPFVLKACGAERASQ 134
+ + +N+VI+ Y G + +A++V+ M G P+ YTYPFV KA G ++ +
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G +HG ++ D +V NAL++ Y +VE +R VF+ M RD++SWN+MISGY
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
NGY++DA+++F D ++ + D+AT+V++LP D+ G +H + + +
Sbjct: 195 RNGYMNDALMMF-DWMVNESVDL-DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
+ + L+++Y CG + AR +FDR+ R + W +I Y G + AL + + +
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 315 AGLRPDGVVFLCLLSACSHA-----GMLAQGWDLFQ 345
G+RP+ V L+S C A G GW + Q
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
Y +L A ++ K A+H H + G + + + L YA C + +RK+F EMP
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
Q ++S+N +I Y G DA+ +F M PD T V A + + G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
+H I+++ D + + L+++Y N G + MAR +FD + +R + WN +I Y +
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
G+ +AL MF +V+ + D + +L C H L G ++ + +E +
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 360 ACIVDLLGRAGDLKKA 375
+V++ + G + +A
Sbjct: 257 NALVNMYLKCGRMDEA 272
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 262/489 (53%), Gaps = 33/489 (6%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++ H V+ GG + D F+ ++ YT + +E ARKVFD++S RDV WN +I GY+
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITYYTKCDN--IESARKVFDEMSERDVVSWNSMISGYS 209
Query: 94 NVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
G F + +Y M C+ PN T V +ACG G +H ++ + +DL
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM--- 209
+ NA++ FYAKC ++ +R +F+EM ++D V++ ++ISGY +G V +A+ LF +M
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 210 ---------------FRHDDI-----------GAPDNATLVTVLPAFAQKADIHAGYWIH 243
H+++ P+ TL ++LP+ +++ G IH
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+ ++ G + + + +I YA G++ A+ +FD DR++ W AII Y +HG +
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACI 362
A S+F Q+ G +PD V +LSA +H+G +F +M T Y + HYAC+
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNA 422
V +L RAG L A+EFI MPI P V+GALL + ++E+A F ++LF ++P N
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENT 569
Query: 423 GRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSA 482
G Y I+A +Y AG+W++A VR ++ +KK G S +E E G R F A D S S
Sbjct: 570 GNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSK 629
Query: 483 QIFETLQSL 491
+++E ++ L
Sbjct: 630 EMYEIIEGL 638
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 203/396 (51%), Gaps = 35/396 (8%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
+ + HA++VV + D F+ +KL+ YT A VFD+++ R+ F +N ++ Y
Sbjct: 41 VLQLHARIVVFSIKPDNFLASKLISFYTRQDR--FRQALHVFDEITVRNAFSYNALLIAY 98
Query: 93 ANVGPFAEALNVYDEMRCAGTT--------PNRYTYPFVLKA---CGAERASQKGHAIHG 141
+ + +A +++ + G++ P+ + VLKA C +HG
Sbjct: 99 TSREMYFDAFSLF--LSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
++ G D D+FVGN ++++Y KC +E++RKVF+EM +RD+VSWNSMISGY+ +G +D
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
++ M D P+ T+++V A Q +D+ G +H +++ +++D +L + +
Sbjct: 217 CKKMYKAMLACSDF-KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
I YA CG + ARA+FD +S++ + AII Y HG +EA+++F ++ GL
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
+ L+ H ++ + F+ M G + + ++ L + +LK E I +
Sbjct: 336 AMISGLMQNNHHEEVI----NSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE-IHA 390
Query: 382 MPIQPG--KNVY------------GALLGACRIHKN 403
I+ G N+Y G LLGA R+ N
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN 426
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 301 bits (771), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 260/482 (53%), Gaps = 10/482 (2%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D + + +L C + ++ + HA + D ++ L+D Y L ARK
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA--KCDCLTDARK 406
Query: 73 VFDKLSARDVFCWNVVIKGYANVGP---FAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
VFD +A DV +N +I+GY+ +G EALN++ +MR P+ T+ +L+A +
Sbjct: 407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASAS 466
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+ IHG K GL+LD+F G+AL+ Y+ C ++ SR VF+EM +D+V WNSM
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSM 526
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
+GY ++A+ LF ++ + PD T ++ A A + G HC ++K
Sbjct: 527 FAGYVQQSENEEALNLFLELQLSRE--RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR 584
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
G++ +P + + L+ +YA CG A FD + R + WN++I Y HG ++AL M
Sbjct: 585 GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQML 644
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRA 369
++++ G+ P+ + F+ +LSACSHAG++ G F+ M +G+ HY C+V LLGRA
Sbjct: 645 EKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRA 704
Query: 370 GDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILA 429
G L KA E I+ MP +P V+ +LL C N+ELAE AE + DP ++G + +L+
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 430 QMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQ 489
+Y G W +A +VR+ ++ + K G S + + F + D+SH + QI+E L
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824
Query: 490 SL 491
L
Sbjct: 825 DL 826
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 168/337 (49%), Gaps = 19/337 (5%)
Query: 7 RLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG 66
RL Q+ D +Y +++H Q++V G E D ++ L++ Y+ G
Sbjct: 49 RLLQLRASDDLLHYQNVVH------------GQIIVWGLELDTYLSNILINLYS--RAGG 94
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLK 125
+ YARKVF+K+ R++ W+ ++ + G + E+L V+ E R +PN Y ++
Sbjct: 95 MVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQ 154
Query: 126 ACGA--ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
AC R + VK G D D++VG L+ FY K ++ +R VF+ +P++
Sbjct: 155 ACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKST 214
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
V+W +MISG G ++ LFY + +D PD L TVL A + + G IH
Sbjct: 215 VTWTTMISGCVKMGRSYVSLQLFYQLM--EDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+I++ G+++D +L + LI Y CG + A +F+ + ++ I W ++ Y + +
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHK 332
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
EA+ +F + GL+PD +L++C+ L G
Sbjct: 333 EAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 155/316 (49%), Gaps = 7/316 (2%)
Query: 40 VVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFA 99
+V G ++D ++ L+D Y D ++YAR VFD L + W +I G +G
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYL--KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSY 231
Query: 100 EALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALV 159
+L ++ ++ P+ Y VL AC + G IH H ++ GL++D + N L+
Sbjct: 232 VSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 160 SFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPD 219
Y KC V A+ K+FN MP ++I+SW +++SGY N +A+ LF M + PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG--LKPD 349
Query: 220 NATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFD 279
++L + A + G +H Y +K + D + + LI +YA C ++ AR +FD
Sbjct: 350 MYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD 409
Query: 280 RISDRTIFVWNAIIRCY---GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGM 336
+ + ++NA+I Y G EAL++F+ + +RP + F+ LL A +
Sbjct: 410 IFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTS 469
Query: 337 LAQGWDLFQTMETYGV 352
L + M YG+
Sbjct: 470 LGLSKQIHGLMFKYGL 485
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 149/294 (50%), Gaps = 18/294 (6%)
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
+ +HG + GL+LD ++ N L++ Y++ + +RKVF +MP+R++VSW++M+S +
Sbjct: 64 NVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYW----IHCYIVKTGMK 252
G ++++++F + +R +P+ L + + A + G W + ++VK+G
Sbjct: 124 GIYEESLVVFLEFWRTRK-DSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLVKSGFD 180
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
D +G+ LI Y G I AR +FD + +++ W +I G + +L +F QL
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
++ + PDG + +LSACS L G + + YG+ + ++D + G +
Sbjct: 241 MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRV 300
Query: 373 KKAVEFIQSMPIQPGKNV--YGALLGACR---IHKN-IELAEFTAEKLFVLDPN 420
A + M P KN+ + LL + +HK +EL FT+ F L P+
Sbjct: 301 IAAHKLFNGM---PNKNIISWTTLLSGYKQNALHKEAMEL--FTSMSKFGLKPD 349
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
IG +L A +H +H I+ G++LD L + LI+LY+ G + A
Sbjct: 39 IGIRGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYA 98
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL-RPDGVVFLCLLSACSH 333
R +F+++ +R + W+ ++ HG +E+L +F + P+ + + ACS
Sbjct: 99 RKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS- 157
Query: 334 AGMLAQG-WDLFQ 345
G+ +G W +FQ
Sbjct: 158 -GLDGRGRWMVFQ 169
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 273/492 (55%), Gaps = 35/492 (7%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
+K +A + G E + +V+ LVD Y + ++ A+++FD+ A ++ N + Y
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYM--KCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
G EAL V++ M +G P+R + + +C R G + HG+ ++ G +
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 154 VGNALVSFYAKCQ-------------------------------EVEASRKVFNEMPQRD 182
+ NAL+ Y KC EV+A+ + F MP+++
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
IVSWN++ISG ++A+ +F M + + A D T++++ A + WI
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA-DGVTMMSIASACGHLGALDLAKWI 492
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
+ YI K G++LD LG+ L+ +++ CG A +IF+ +++R + W A I M G+A
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYAC 361
+ A+ +F +++ GL+PDGV F+ L+ACSH G++ QG ++F +M + +GV+ + HY C
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 362 IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNN 421
+VDLLGRAG L++AV+ I+ MP++P ++ +LL ACR+ N+E+A + AEK+ VL P
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER 672
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYS 481
G YV+L+ +Y AG+W D A+VR +++E ++KP G SS+++ +F + DESHP
Sbjct: 673 TGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEM 732
Query: 482 AQIFETLQSLDR 493
I L + +
Sbjct: 733 PNIEAMLDEVSQ 744
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 184/312 (58%), Gaps = 3/312 (0%)
Query: 24 LHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYT-LHSDSGLEYARKVFDKL-SARD 81
L CKT D +K H + G + D + KLV + L + L +A++VF+ S
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
F +N +I+GYA+ G EA+ ++ M +G +P++YT+PF L AC RA G IHG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
VK G DLFV N+LV FYA+C E++++RKVF+EM +R++VSW SMI GY + D
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
AV LF+ M R +++ P++ T+V V+ A A+ D+ G ++ +I +G++++ + S L
Sbjct: 219 AVDLFFRMVRDEEV-TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
+ +Y C I +A+ +FD + + NA+ Y G +EAL +F ++D+G+RPD
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 322 VVFLCLLSACSH 333
+ L +S+CS
Sbjct: 338 ISMLSAISSCSQ 349
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 103 NVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFY 162
++ ++ +C TP+ LK C + + H K GLD D+ LV+
Sbjct: 24 SLLNQSKCTKATPSS------LKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARS 74
Query: 163 AKCQEVEA---SRKVF-NEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
+ E+ +++VF N +NS+I GY ++G ++A+LLF M +P
Sbjct: 75 CELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGI--SP 132
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
D T L A A+ G IH IVK G D + + L+ YA CG + AR +F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAGLRPDGVVFLCLLSACSHAGML 337
D +S+R + W ++I Y A++A+ +F ++V D + P+ V +C++SAC+ L
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 338 AQGWDLFQTMETYGVAKSEAHYACIVDL 365
G ++ + G+ ++ + +VD+
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGY---ISMARAIFDRI-SDRTIFVWNAIIRCYGM 298
H + K G+ D + + L++ G +S A+ +F+ S T F++N++IR Y
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
G EA+ +F +++++G+ PD F LSAC+ + G + + G AK
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 359 YACIVDLLGRAGDLKKAVEFIQSM 382
+V G+L A + M
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEM 195
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 273/492 (55%), Gaps = 35/492 (7%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
+K +A + G E + +V+ LVD Y + ++ A+++FD+ A ++ N + Y
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSALVDMYM--KCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
G EAL V++ M +G P+R + + +C R G + HG+ ++ G +
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 154 VGNALVSFYAKCQ-------------------------------EVEASRKVFNEMPQRD 182
+ NAL+ Y KC EV+A+ + F MP+++
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
IVSWN++ISG ++A+ +F M + + A D T++++ A + WI
Sbjct: 434 IVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNA-DGVTMMSIASACGHLGALDLAKWI 492
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
+ YI K G++LD LG+ L+ +++ CG A +IF+ +++R + W A I M G+A
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYAC 361
+ A+ +F +++ GL+PDGV F+ L+ACSH G++ QG ++F +M + +GV+ + HY C
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 362 IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNN 421
+VDLLGRAG L++AV+ I+ MP++P ++ +LL ACR+ N+E+A + AEK+ VL P
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPER 672
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYS 481
G YV+L+ +Y AG+W D A+VR +++E ++KP G SS+++ +F + DESHP
Sbjct: 673 TGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEM 732
Query: 482 AQIFETLQSLDR 493
I L + +
Sbjct: 733 PNIEAMLDEVSQ 744
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 184/312 (58%), Gaps = 3/312 (0%)
Query: 24 LHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYT-LHSDSGLEYARKVFDKL-SARD 81
L CKT D +K H + G + D + KLV + L + L +A++VF+ S
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
F +N +I+GYA+ G EA+ ++ M +G +P++YT+PF L AC RA G IHG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
VK G DLFV N+LV FYA+C E++++RKVF+EM +R++VSW SMI GY + D
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
AV LF+ M R +++ P++ T+V V+ A A+ D+ G ++ +I +G++++ + S L
Sbjct: 219 AVDLFFRMVRDEEV-TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
+ +Y C I +A+ +FD + + NA+ Y G +EAL +F ++D+G+RPD
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 322 VVFLCLLSACSH 333
+ L +S+CS
Sbjct: 338 ISMLSAISSCSQ 349
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 16/268 (5%)
Query: 103 NVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFY 162
++ ++ +C TP+ LK C + + H K GLD D+ LV+
Sbjct: 24 SLLNQSKCTKATPSS------LKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARS 74
Query: 163 AKCQEVEA---SRKVF-NEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
+ E+ +++VF N +NS+I GY ++G ++A+LLF M +P
Sbjct: 75 CELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGI--SP 132
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
D T L A A+ G IH IVK G D + + L+ YA CG + AR +F
Sbjct: 133 DKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVF 192
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAGLRPDGVVFLCLLSACSHAGML 337
D +S+R + W ++I Y A++A+ +F ++V D + P+ V +C++SAC+ L
Sbjct: 193 DEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDL 252
Query: 338 AQGWDLFQTMETYGVAKSEAHYACIVDL 365
G ++ + G+ ++ + +VD+
Sbjct: 253 ETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGY---ISMARAIFDRI-SDRTIFVWNAIIRCYGM 298
H + K G+ D + + L++ G +S A+ +F+ S T F++N++IR Y
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
G EA+ +F +++++G+ PD F LSAC+ + G + + G AK
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 359 YACIVDLLGRAGDLKKAVEFIQSM 382
+V G+L A + M
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEM 195
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 297 bits (761), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 183/559 (32%), Positives = 275/559 (49%), Gaps = 77/559 (13%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGL 67
L Q S F +L +++ H+++++ + + KL+ Y D +
Sbjct: 33 LDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKD--V 90
Query: 68 EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC 127
ARKVFD++ R+V NV+I+ Y N G + E + V+ M P+ YT+P VLKAC
Sbjct: 91 ASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKAC 150
Query: 128 GAERASQKGHAIHGHAVKCGLDLDLFVGN------------------------------- 156
G IHG A K GL LFVGN
Sbjct: 151 SCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWN 210
Query: 157 ALVSFYAK----------CQEVEASR---------------------------KVFNEMP 179
+LV YA+ C+E+E+ + +F +M
Sbjct: 211 SLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG 270
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
++ +VSWN MI Y N +AV L+ M D PD ++ +VLPA + + G
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRM--EADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 240 YWIHCYIVKTGMKLDPNL--GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
IH YI + KL PNL + LI +YA CG + AR +F+ + R + W A+I YG
Sbjct: 329 KKIHGYIERK--KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSE 356
G +A+++F +L D+GL PD + F+ L+ACSHAG+L +G F+ M + Y +
Sbjct: 387 FSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFV 416
H AC+VDLLGRAG +K+A FIQ M ++P + V+GALLGACR+H + ++ A+KLF
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ 506
Query: 417 LDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDE 476
L P +G YV+L+ +Y AG+W++ +R ++ +KK G S+VE+ F D
Sbjct: 507 LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDR 566
Query: 477 SHPYSAQIFETLQSLDRIM 495
SHP S +I+ L L + M
Sbjct: 567 SHPQSDEIYRELDVLVKKM 585
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/486 (33%), Positives = 268/486 (55%), Gaps = 13/486 (2%)
Query: 13 VLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY 69
VL D+ ++ LL +++ K+ H ++ D F+ + L+D Y G+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAY--FKCRGVSM 393
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A+ +F + ++ DV + +I GY + G + ++L ++ + +PN T +L G
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
A + G +HG +K G D +G A++ YAKC + + ++F + +RDIVSWNSM
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAP--DNATLVTVLPAFAQKADIHAGYWIHCYIV 247
I+ + A+ D+FR + D ++ L A A G IH +++
Sbjct: 514 ITRCAQSDNPSAAI----DIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI 569
Query: 248 KTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALS 307
K + D S LI +YA CG + A +F + ++ I WN+II G HG +++L
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 308 MFQQLVD-AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDL 365
+F ++V+ +G+RPD + FL ++S+C H G + +G F++M E YG+ + HYAC+VDL
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
GRAG L +A E ++SMP P V+G LLGACR+HKN+ELAE + KL LDP+N+G Y
Sbjct: 690 FGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYY 749
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIF 485
V+++ + +A +W+ +VR ++E +++K GYS +E+ F + D +HP S+ I+
Sbjct: 750 VLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIY 809
Query: 486 ETLQSL 491
L SL
Sbjct: 810 SLLNSL 815
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 170/344 (49%), Gaps = 14/344 (4%)
Query: 44 GHEQDPFIVAKLVDKYTLHSDSGLEYAR-----KVFDKLSARDVFCWNVVIKGYANVGPF 98
G + + F+ + L+ Y LEY + K+FD++ +D WNV++ GYA G
Sbjct: 168 GMDCNEFVASSLIKAY-------LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 99 AEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNAL 158
+ + MR +PN T+ VL C ++ G +HG V G+D + + N+L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 159 VSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
+S Y+KC + + K+F M + D V+WN MISGY +G +++++ FY+M + P
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL--P 338
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
D T ++LP+ ++ ++ IHCYI++ + LD L S LI Y C +SMA+ IF
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLA 338
+ + + V+ A+I Y +G ++L MF+ LV + P+ + + +L L
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 339 QGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G +L + G ++D+ + G + A E + +
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 167/338 (49%), Gaps = 15/338 (4%)
Query: 1 MRGVSRRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVD 57
+R SR L++ R S LL C + + K+ HA ++V D + +++
Sbjct: 23 LRNSSRFLEETIPRRLSL----LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILG 78
Query: 58 KYTL---HSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT 114
Y + SD G + R + S R WN +I + G +AL Y +M C G +
Sbjct: 79 MYAMCGSFSDCGKMFYRLDLRRSSIRP---WNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
P+ T+P ++KAC A + + + G+D + FV ++L+ Y + +++ K+
Sbjct: 136 PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKL 195
Query: 175 FNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA 234
F+ + Q+D V WN M++GY G + D+V+ + + R D I +P+ T VL A K
Sbjct: 196 FDRVLQKDCVIWNVMLNGYAKCGAL-DSVIKGFSVMRMDQI-SPNAVTFDCVLSVCASKL 253
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
I G +H +V +G+ + ++ + L+S+Y+ CG A +F +S WN +I
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
Y G +E+L+ F +++ +G+ PD + F LL + S
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 264/475 (55%), Gaps = 17/475 (3%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
L LC + + + H Q+ + + D FI+++LV +L L +AR + S
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
WN++ +GY++ E++ VY EM+ G PN+ T+PF+LKAC + G I
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
+K G D D++VGN L+ Y C++ +RKVF+EM +R++VSWNS+++ NG ++
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 203 VLLFYDMFRHDDIG---APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
F +M IG PD T+V +L A ++ G +H ++ ++L+ LG+
Sbjct: 199 FECFCEM-----IGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGT 251
Query: 260 GLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAGLR 318
L+ +YA G + AR +F+R+ D+ ++ W+A+I +G A+EAL +F +++ ++ +R
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 319 PDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
P+ V FL +L ACSH G++ G+ F ME + + HY +VD+LGRAG L +A +
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 378 FIQSMPIQPGKNVYGALLGACRIHKNIE---LAEFTAEKLFVLDPNNAGRYVILAQMYED 434
FI+ MP +P V+ LL AC IH + + + E ++L L+P +G VI+A + +
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 435 AGQWQDAARVRKAIRENDIKKPIGYSSVEL-ESGHRKFGANDESHPYSAQIFETL 488
A W +AA VR+ ++E +KK G S +EL S HR F D Y I+E L
Sbjct: 432 ARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEY-VSIYELL 485
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 155/462 (33%), Positives = 269/462 (58%), Gaps = 12/462 (2%)
Query: 20 YTDLLHLCKTTDS----IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
YTDLLH C + S IK + +P +++KL+ +++ L+ ARK+FD
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRR--LDLARKIFD 191
Query: 76 KLSARDVFC---WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
++ + W + GY+ G +AL VY +M C+ P ++ LKAC +
Sbjct: 192 DVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKD 251
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
+ G IH VK +D V N L+ Y + + +RKVF+ M +R++V+WNS+IS
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISV 311
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
+ V + LF M +++ ATL T+LPA ++ A + G IH I+K+ K
Sbjct: 312 LSKKVRVHEMFNLFRKM--QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEK 369
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
D L + L+ +Y CG + +R +FD + + + WN ++ CY ++G+ +E +++F+ +
Sbjct: 370 PDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM 429
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGD 371
+++G+ PDG+ F+ LLS CS G+ G LF+ M+T + V+ + HYAC+VD+LGRAG
Sbjct: 430 IESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGK 489
Query: 372 LKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQM 431
+K+AV+ I++MP +P +++G+LL +CR+H N+ + E A++LFVL+P+N G YV+++ +
Sbjct: 490 IKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNI 549
Query: 432 YEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGA 473
Y DA W + ++R+ +++ +KK G S V+++ + F A
Sbjct: 550 YADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVA 591
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 294 bits (753), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 167/491 (34%), Positives = 260/491 (52%), Gaps = 54/491 (10%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPF----IVAKLVDKYTLHSDSG------LEYARK 72
LL LC+T + + HAQ + G + F + A ++ T S S + YA
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFA-EALNVYDEMRCAGTTPNRYTYPFVLKACGAER 131
VF ++ FC+N +I+ P + + + EMR P+ +T+PFV KAC A++
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 132 ASQKG--HAIHGHAVKCGLDLDLFVGNALVSFYA-------------------------- 163
+H A++ GL DLF N L+ Y+
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 164 -----KCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-A 217
K +E+ +R++F+ MP RD+VSWNS+ISGY + +A+ LF +M +G
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA---LGLK 246
Query: 218 PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAI 277
PDN +V+ L A AQ D G IH Y + + +D L +GL+ YA CG+I A I
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 278 FDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
F+ SD+T+F WNA+I MHG+ + + F+++V +G++PDGV F+ +L CSH+G++
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLV 366
Query: 338 AQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKN----VYG 392
+ +LF M + Y V + HY C+ DLLGRAG +++A E I+ MP G +
Sbjct: 367 DEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWS 426
Query: 393 ALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAI-REN 451
LLG CRIH NIE+AE A ++ L P + G Y ++ +MY +A +W++ +VR+ I R+
Sbjct: 427 GLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDK 486
Query: 452 DIKKPIGYSSV 462
+KK +G+S V
Sbjct: 487 KVKKNVGFSKV 497
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 294 bits (753), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/471 (34%), Positives = 260/471 (55%), Gaps = 45/471 (9%)
Query: 61 LHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRY 118
LH G ++ A F++++ RD+ WN +I G+ G AL+++ +M R + +P+R+
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 119 TYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRK----- 173
T VL AC G IH H V G D+ V NAL+S Y++C VE +R+
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 174 ----------------------------VFNEMPQRDIVSWNSMISGYTTNGYVDDAVLL 205
+F + RD+V+W +MI GY +G +A+ L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 206 FYDMFRHDDIGA---PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
F M +G P++ TL +L + A + G IH VK+G ++ + LI
Sbjct: 401 FRSM-----VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 263 SLYANCGYISMARAIFDRIS-DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
++YA G I+ A FD I +R W ++I HGHA+EAL +F+ ++ GLRPD
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETY-GVAKSEAHYACIVDLLGRAGDLKKAVEFIQ 380
+ ++ + SAC+HAG++ QG F M+ + + +HYAC+VDL GRAG L++A EFI+
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Query: 381 SMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQD 440
MPI+P +G+LL ACR+HKNI+L + AE+L +L+P N+G Y LA +Y G+W++
Sbjct: 576 KMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 635
Query: 441 AARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
AA++RK++++ +KK G+S +E++ FG D +HP +I+ T++ +
Sbjct: 636 AAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKI 686
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 168/380 (44%), Gaps = 77/380 (20%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
DS E+ FD+L RD W +I GY N+G + +A+ V +M G P ++T V
Sbjct: 97 DSTCEF----FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
L + A R + G +H VK GL ++ V N+L++ YAKC + ++ VF+ M RDI
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 184 VSW-------------------------------NSMISGYTTNGYVDDAVLLFYDMFRH 212
SW NSMISG+ GY A+ +F M R
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR- 271
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
D + +PD TL +VL A A + G IH +IV TG + + + LIS+Y+ CG +
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 273 MARA---------------------------------IFDRISDRTIFVWNAIIRCYGMH 299
AR IF + DR + W A+I Y H
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL----FQTMETYGVAKS 355
G EA+++F+ +V G RP+ +LS S L+ G + ++ E Y V+ S
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 356 EAHYACIVDLLGRAGDLKKA 375
A ++ + +AG++ A
Sbjct: 452 NA----LITMYAKAGNITSA 467
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 61/303 (20%)
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGY 198
+H +K GL +++ N L++ Y+K +RK+F+EMP R SWN+++S Y+ G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 199 VDDAVLLFYDMFRHDDIG-----------------------------APDNATLVTVLPA 229
+D F + + D + P TL VL +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 230 FAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR--------- 280
A + G +H +IVK G++ + ++ + L+++YA CG MA+ +FDR
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 281 ----------------------ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAGL 317
+++R I WN++I + G+ AL +F +++ D+ L
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 318 RPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
PD +LSAC++ L G + + T G S ++ + R G ++ A
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 378 FIQ 380
I+
Sbjct: 336 LIE 338
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 122/283 (43%), Gaps = 48/283 (16%)
Query: 55 LVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT 114
L+D Y D + A+ +F L RDV W +I GY G + EA+N++ M G
Sbjct: 353 LLDGYIKLGD--MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
PN YT +L + + G IHG AVK G + V NAL++ YAK + ++ +
Sbjct: 411 PNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRA 470
Query: 175 FNEMP-QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQK 233
F+ + +RD VSW SMI +G+ ++A+ LF M PD+ T V
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG--LRPDHITYV--------- 519
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD-----RTIFV 288
G+ S + G ++ R FD + D T+
Sbjct: 520 --------------------------GVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
+ ++ +G G QEA +++ + PD V + LLSAC
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKM---PIEPDVVTWGSLLSAC 593
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
+HC ++K+G+ L + L+++Y+ GY AR +FD + RT F WN ++ Y G
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYAC 361
F QL + D V + ++ + G + + M G+ ++
Sbjct: 96 MDSTCEFFDQLP----QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTN 151
Query: 362 IVDLLGRAGDL---KKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD 418
++ + + KK FI + ++ +V +LL + +A+F +++ V D
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 419 PNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
++ + L + GQ A + + E DI
Sbjct: 212 ISSWNAMIAL---HMQVGQMDLAMAQFEQMAERDI 243
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 294 bits (753), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 170/498 (34%), Positives = 269/498 (54%), Gaps = 12/498 (2%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTT---DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD 64
++Q SVL DSF ++++ C + K HA++ + I + L+ TL+S
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALL---TLYSK 420
Query: 65 SGLEY-ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT--PNRYTYP 121
G + A VF + +D+ W +I G G F EAL V+ +M+ + P+
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 122 FVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
V AC A + G +HG +K GL L++FVG++L+ Y+KC E + KVF M
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYW 241
++V+WNSMIS Y+ N + ++ LF M PD+ ++ +VL A + A + G
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF--PDSVSITSVLVAISSTASLLKGKS 598
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
+H Y ++ G+ D +L + LI +Y CG+ A IF ++ +++ WN +I YG HG
Sbjct: 599 LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGD 658
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYA 360
ALS+F ++ AG PD V FL L+SAC+H+G + +G ++F+ M + YG+ + HYA
Sbjct: 659 CITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYA 718
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
+VDLLGRAG L++A FI++MPI+ +++ LL A R H N+EL +AEKL ++P
Sbjct: 719 NMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPE 778
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPY 480
YV L +Y +AG +AA++ ++E + K G S +E+ F + S P
Sbjct: 779 RGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPM 838
Query: 481 SAQIFETLQSLDRIMGKE 498
A+IF L L M E
Sbjct: 839 KAEIFNVLNRLKSNMVDE 856
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 5/366 (1%)
Query: 20 YTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
+T L C +++ ++ H VV G DP++ L+ Y+ G A VF
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVG--EAETVFSC 332
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
+ + + WN ++ YA AL+++ MR P+ +T V+ C G
Sbjct: 333 VVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
++H K + + +AL++ Y+KC + VF M ++D+V+W S+ISG N
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G +A+ +F DM DD PD+ + +V A A + G +H ++KTG+ L+
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+GS LI LY+ CG MA +F +S + WN++I CY + + ++ +F ++ G
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAV 376
+ PD V +L A S L +G L G+ ++D+ + G K A
Sbjct: 573 IFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAE 632
Query: 377 EFIQSM 382
+ M
Sbjct: 633 NIFKKM 638
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 182/396 (45%), Gaps = 19/396 (4%)
Query: 18 FYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVF 74
F + LL C ++ K H VVV G DPFI LV+ Y L+YA +VF
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYV--KCGFLDYAVQVF 118
Query: 75 DK-------LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC 127
D +SARDV WN +I GY F E + + M G P+ ++ V+
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 128 GAERA--SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-DIV 184
E ++G IHG ++ LD D F+ AL+ Y K + +VF E+ + ++V
Sbjct: 179 CKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV 238
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHC 244
WN MI G+ +G + ++ L+ M ++ + + L A +Q + G IHC
Sbjct: 239 LWNVMIVGFGGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHC 296
Query: 245 YIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQE 304
+VK G+ DP + + L+S+Y+ CG + A +F + D+ + +WNA++ Y + +
Sbjct: 297 DVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYS 356
Query: 305 ALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVD 364
AL +F + + PD ++S CS G+ G + + + + + ++
Sbjct: 357 ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLT 416
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALL-GACR 399
L + G A +SM + +G+L+ G C+
Sbjct: 417 LYSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCK 451
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 172/426 (40%), Gaps = 72/426 (16%)
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCAGTTP---NRYTYPFVLKACGAERASQKGHAIHGH 142
N I+ G + +AL++Y + G++P + +T+P +LKAC A G IHG
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ-------RDIVSWNSMISGYTT 195
V G D F+ +LV+ Y KC ++ + +VF+ Q RD+ WNSMI GY
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI--HAGYWIHCYIVKTGMKL 253
+ V F M PD +L V+ ++ + G IH ++++ +
Sbjct: 146 FRRFKEGVGCFRRMLVFGV--RPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDT 203
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRT-IFVWNAIIRCYGMHGHAQEALSMFQQL 312
D L + LI +Y G A +F I D++ + +WN +I +G G + +L ++
Sbjct: 204 DSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263
Query: 313 VDAGLRPDGVVFLCLLSACS-----------HAGMLAQGW--------DLFQTMETYG-V 352
+ ++ F L ACS H ++ G L G V
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYG----ALLGACRIHKNIELAE 408
++E ++C+VD K +E +M +N YG L G R K++
Sbjct: 324 GEAETVFSCVVD---------KRLEIWNAMVAAYAENDYGYSALDLFGFMR-QKSVLPDS 373
Query: 409 FTAEKLF----VLDPNNAGRYV-----------------ILAQMYEDAGQWQDAARVRKA 447
FT + VL N G+ V L +Y G DA V K+
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS 433
Query: 448 IRENDI 453
+ E D+
Sbjct: 434 MEEKDM 439
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/496 (31%), Positives = 266/496 (53%), Gaps = 12/496 (2%)
Query: 4 VSRRLQQISVLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYT 60
+ R++Q ++ + + Y +L C ++ + H+Q++ + + ++ + L+D Y
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 61 LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
L+ A + + + +DV W +I GY +AL + +M G +
Sbjct: 537 --KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
+ AC +A ++G IH A G DL NALV+ Y++C ++E S F +
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH--DDIGAPDNATLVTVLPAFAQKADIHA 238
D ++WN+++SG+ +G ++A+ +F M R D+ +N T + + A ++ A++
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDN----NNFTFGSAVKAASETANMKQ 710
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGM 298
G +H I KTG + + + LIS+YA CG IS A F +S + WNAII Y
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEA 357
HG EAL F Q++ + +RP+ V + +LSACSH G++ +G F++M + YG++
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL 417
HY C+VD+L RAG L +A EFIQ MPI+P V+ LL AC +HKN+E+ EF A L L
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 890
Query: 418 DPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDES 477
+P ++ YV+L+ +Y + +W R+ ++E +KK G S +E+++ F D++
Sbjct: 891 EPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQN 950
Query: 478 HPYSAQIFETLQSLDR 493
HP + +I E Q L +
Sbjct: 951 HPLADEIHEYFQDLTK 966
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 8/381 (2%)
Query: 3 GVSRRLQQISVLRDSFYYTDLLHLCK----TTDSIKKAHAQVVVGGHEQDPFIVAKLVDK 58
G+ R+ +V + ++ +L C+ D +++ HA+++ G + L+D
Sbjct: 172 GLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL 231
Query: 59 YTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRY 118
Y+ + ++ AR+VFD L +D W +I G + AEA+ ++ +M G P Y
Sbjct: 232 YS--RNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPY 289
Query: 119 TYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM 178
+ VL AC + + G +HG +K G D +V NALVS Y + ++ +F+ M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
QRD V++N++I+G + GY + A+ LF M H D PD+ TL +++ A + +
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRM--HLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGM 298
G +H Y K G + + L++LYA C I A F + +WN ++ YG+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
+ + +F+Q+ + P+ + +L C G L G + + +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 359 YACIVDLLGRAGDLKKAVEFI 379
+ ++D+ + G L A + +
Sbjct: 528 CSVLIDMYAKLGKLDTAWDIL 548
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 170/358 (47%), Gaps = 5/358 (1%)
Query: 29 TTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVV 88
+ D +K H+Q++ G + + + KL D Y D L A KVFD++ R +F WN +
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGD--LYGAFKVFDEMPERTIFTWNKM 157
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC-GAERASQKGHAIHGHAVKCG 147
IK A+ E ++ M TPN T+ VL+AC G A IH + G
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
L V N L+ Y++ V+ +R+VF+ + +D SW +MISG + N +A+ LF
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
DM+ + P +VL A + + G +H ++K G D + + L+SLY +
Sbjct: 278 DMYVLGIMPTP--YAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
G + A IF +S R +N +I G+ ++A+ +F+++ GL PD L
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+ ACS G L +G L G A + +++L + D++ A+++ ++
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVE 453
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 12/346 (3%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++ HA G + I L++ Y +D +E A F + +V WNV++ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCAD--IETALDYFLETEVENVVLWNVMLVAYG 466
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
+ + ++ +M+ PN+YTYP +LK C + G IH +K L+ +
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF--- 210
V + L+ YAK +++ + + +D+VSW +MI+GYT + D A+ F M
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 211 -RHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
R D++G + + L A + IHA + +G D + L++LY+ CG
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACV------SGFSSDLPFQNALVTLYSRCG 640
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
I + F++ WNA++ + G+ +EAL +F ++ G+ + F +
Sbjct: 641 KIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 330 ACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
A S + QG + + G ++ + + G + A
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDA 746
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/464 (33%), Positives = 261/464 (56%), Gaps = 8/464 (1%)
Query: 1 MRGVSRRLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYT 60
+R +R LQ+ + D F LL + + K+ H + G D + + L +T
Sbjct: 438 IRLFTRMLQE-GLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSL---FT 493
Query: 61 LHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYT 119
L+S G LE + K+F + +D CW +I G+ G EA+ ++ EM GT+P+ T
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDEST 553
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
VL C + + +G IHG+ ++ G+D + +G+ALV+ Y+KC ++ +R+V++ +P
Sbjct: 554 LAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
+ D VS +S+ISGY+ +G + D LLF DM D+ + ++L A A + G
Sbjct: 614 ELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG--FTMDSFAISSILKAAALSDESSLG 671
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
+H YI K G+ +P++GS L+++Y+ G I F +I+ + W A+I Y H
Sbjct: 672 AQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQH 731
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAH 358
G A EAL ++ + + G +PD V F+ +LSACSH G++ + + +M + YG+ H
Sbjct: 732 GKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRH 791
Query: 359 YACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD 418
Y C+VD LGR+G L++A FI +M I+P V+G LL AC+IH +EL + A+K L+
Sbjct: 792 YVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELE 851
Query: 419 PNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
P++AG Y+ L+ + + G+W + RK ++ ++K G+SSV
Sbjct: 852 PSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 167/341 (48%), Gaps = 22/341 (6%)
Query: 67 LEYARKVF-DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
E A KVF D LSA +V+CWN +I G + +++ EM P+ YTY VL
Sbjct: 201 FEDAYKVFRDSLSA-NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
AC + + G + +KCG + D+FV A+V YAKC + + +VF+ +P +VS
Sbjct: 260 ACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
W M+SGYT + A+ +F +M RH + +N T+ +V+ A + + + +H +
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEM-RHSGVEI-NNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD-RTIFVWNAIIRCYGMHGHAQE 304
+ K+G LD ++ + LIS+Y+ G I ++ +F+ + D + + N +I + +
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGK 436
Query: 305 ALSMFQQLVDAGLRPDGVVFLCLLSA--CSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
A+ +F +++ GLR D LLS C + G G+ L G+ + +
Sbjct: 437 AIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL-----KSGLVLDLTVGSSL 491
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQ---------PGKNVYGAL 394
L + G L+++ + Q +P + G N YG L
Sbjct: 492 FTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 161/349 (46%), Gaps = 7/349 (2%)
Query: 48 DPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYD 106
D F+ L+ Y S+SG + A K+FD + DV N++I GY F E+L +
Sbjct: 83 DVFLTKSLLSWY---SNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 107 EMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQ 166
+M G N +Y V+ AC A +A + H +K G V +AL+ ++K
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 167 EVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTV 226
E + KVF + ++ WN++I+G N LF++M PD+ T +V
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV--GFQKPDSYTYSSV 257
Query: 227 LPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTI 286
L A A + G + ++K G + D + + ++ LYA CG+++ A +F RI + ++
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 287 FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQT 346
W ++ Y A AL +F+++ +G+ + ++SAC M+ + +
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAW 376
Query: 347 METYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALL 395
+ G + A ++ + ++GD+ + + + + +N+ ++
Sbjct: 377 VFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMI 425
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 19/244 (7%)
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
L D+F+ +L+S+Y+ + + K+F+ +PQ D+VS N MISGY + ++++ F
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 208 DM----FRHDDI--GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
M F ++I G+ +A P F++ + C+ +K G + S L
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSE--------LVCCHTIKMGYFFYEVVESAL 191
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
I +++ A +F ++ WN II + + +F ++ +PD
Sbjct: 192 IDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDS 251
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYAC--IVDLLGRAGDLKKAVEFI 379
+ +L+AC+ L G + + G +E + C IVDL + G + +A+E
Sbjct: 252 YTYSSVLAACASLEKLRFGKVVQARVIKCG---AEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 380 QSMP 383
+P
Sbjct: 309 SRIP 312
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 269/489 (55%), Gaps = 24/489 (4%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDP---FIVAKLVDKYTLHSDSGLEYARKVFDKLSA 79
L C +K+ HA + + ++P F+ K++ + SD + YA +VFD +
Sbjct: 54 LAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSD--VNYAFRVFDSIEN 111
Query: 80 RDVFCWNVVIKGYA-NVGPFAEALNVYDEMRCAG-TTPNRYTYPFVLKACGAERASQKGH 137
F WN +I+ A +V EA +Y +M G ++P+++T+PFVLKAC +G
Sbjct: 112 HSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGK 171
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
+H VK G D++V N L+ Y C ++ +RKVF+EMP+R +VSWNSMI G
Sbjct: 172 QVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK---TGMKLD 254
D A+ LF +M R + PD T+ +VL A A + G W H ++++ + +D
Sbjct: 232 EYDSALQLFREMQRSFE---PDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
+ + LI +Y CG + MA +F + R + WNA+I + HG A+EA++ F ++VD
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 315 A--GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGD 371
+RP+ V F+ LL AC+H G + +G F M Y + + HY CIVDL+ RAG
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 372 LKKAVEFIQSMPIQPGKNVYGALLGA-CRIHKNIELAEFTAEKLFVLDPNN-------AG 423
+ +A++ + SMP++P ++ +LL A C+ ++EL+E A + +N +G
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSG 468
Query: 424 RYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQ 483
YV+L+++Y A +W D VRK + E+ I+K G SS+E+ +F A D SHP + Q
Sbjct: 469 AYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQ 528
Query: 484 IFETLQSLD 492
I++ L+ +D
Sbjct: 529 IYQQLKVID 537
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/468 (31%), Positives = 267/468 (57%), Gaps = 11/468 (2%)
Query: 34 KKAHAQVVVGGHEQ-DPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
K+ H V E D ++ ++D Y+ + + + YA ++F+ + R++ WNV+I Y
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGE--VSYAERIFNGMIQRNIVAWNVMIGCY 308
Query: 93 ANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD 151
A G +A + +M G P+ T +L A A +G IHG+A++ G
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPH 364
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFR 211
+ + AL+ Y +C +++++ +F+ M +++++SWNS+I+ Y NG A+ LF +++
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW- 423
Query: 212 HDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
D PD+ T+ ++LPA+A+ + G IH YIVK+ + + + L+ +YA CG +
Sbjct: 424 -DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 272 SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
AR F+ I + + WN+II Y +HG + ++ +F +++ + + P+ F LL+AC
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 332 SHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNV 390
S +GM+ +GW+ F++M+ YG+ HY C++DL+GR G+ A F++ MP P +
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 391 YGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRE 450
+G+LL A R HK+I +AEF AE++F ++ +N G YV+L MY +AG+W+D R++ +
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMES 662
Query: 451 NDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKE 498
I + S+VE + F D SH + +I+E L + R++G+E
Sbjct: 663 KGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEE 710
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 178/351 (50%), Gaps = 37/351 (10%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
+E A ++FD+++ D F WNV+IKG+ + G + EA+ Y M AG + +TYPFV+K+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
+ ++G IH +K G D++V N+L+S Y K + KVF EMP+RDIVSW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
NSMISGY G +++LF +M + PD + ++ L A + G IHC+
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCG--FKPDRFSTMSALGACSHVYSPKMGKEIHCHA 257
Query: 247 VKTGMKL-DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
V++ ++ D + + ++ +Y+ G +S A IF+ + R I WN +I CY +G +A
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDA 317
Query: 306 LSMFQQLVDA-GLRPDGVVFLCLLSACS-------HAGMLAQGWDLFQTMETYGVAKSEA 357
FQ++ + GL+PD + + LL A + H + +G+ +ET
Sbjct: 318 FLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLET-------- 369
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMP--------------IQPGKNVYGAL 394
++D+ G G LK A M +Q GKN Y AL
Sbjct: 370 ---ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKN-YSAL 416
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 2/172 (1%)
Query: 162 YAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA 221
+A + +E + ++F+EM + D WN MI G+T+ G +AV FY + A D
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAV-QFYSRMVFAGVKA-DTF 131
Query: 222 TLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRI 281
T V+ + A + + G IH ++K G D + + LISLY G A +F+ +
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 282 SDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
+R I WN++I Y G +L +F++++ G +PD + L ACSH
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/481 (32%), Positives = 266/481 (55%), Gaps = 11/481 (2%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHA---QVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
DS +T + C + ++K A + V G++ D F+ + +++ Y ++ A
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYM--KCGKMDEAEV 172
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
+F K++ RDV CW ++ G+A G +A+ Y EM+ G +R +L+A G
Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGD 232
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
++ G ++HG+ + GL +++ V +LV YAK +E + +VF+ M + VSW S+ISG
Sbjct: 233 TKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISG 292
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
+ NG + A F + +G PD TLV VL A +Q + G +HCYI+K +
Sbjct: 293 FAQNGLANKA---FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV 349
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
LD + L+ +Y+ CG +S +R IF+ + + + WN +I CYG+HG+ QE +S+F +
Sbjct: 350 -LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAG 370
+ ++ + PD F LLSA SH+G++ QG F M Y + SE HY C++DLL RAG
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAG 468
Query: 371 DLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQ 430
+++A++ I S + ++ ALL C H+N+ + + A K+ L+P++ G +++
Sbjct: 469 RVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSN 528
Query: 431 MYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQS 490
+ A +W++ A+VRK +R ++K GYS++E+ R F D SH + + L++
Sbjct: 529 FFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRN 588
Query: 491 L 491
L
Sbjct: 589 L 589
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 145/274 (52%), Gaps = 2/274 (0%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
+ YARKVFD+L R V +N +I Y+ E L +YD+M P+ T+ +KA
Sbjct: 66 ISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKA 125
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C + +KG A+ AV G D+FV +++++ Y KC +++ + +F +M +RD++ W
Sbjct: 126 CLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICW 185
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
+M++G+ G AV FY +++ G D ++ +L A D G +H Y+
Sbjct: 186 TTMVTGFAQAGKSLKAV-EFYREMQNEGFG-RDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+TG+ ++ + + L+ +YA G+I +A +F R+ +T W ++I + +G A +A
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
++ G +PD V + +L ACS G L G
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 10/261 (3%)
Query: 139 IHGHAVKCGLDLDLFVGNA----LVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
IH + G +L G++ L++ + E+ +RKVF+E+PQR + +NSMI Y+
Sbjct: 36 IHAFVISTG---NLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
G D VL YD + I PD++T + A + G + C V G K D
Sbjct: 93 -RGKNPDEVLRLYDQMIAEKI-QPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
+ S +++LY CG + A +F +++ R + W ++ + G + +A+ ++++ +
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 315 AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKK 374
G D VV L LL A G G + + G+ + +VD+ + G ++
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 375 AVEFIQSMPIQPGKNVYGALL 395
A M + + +G+L+
Sbjct: 271 ASRVFSRMMFKTAVS-WGSLI 290
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 267/540 (49%), Gaps = 63/540 (11%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
LL+ CK ++ + H + G + D + KL+ + L YAR++ D
Sbjct: 11 LLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDA 70
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTT-PNRYTYPFVLKACGAERASQKGHAIHG 141
F +N +++GY+ ++ V+ EM G P+ +++ FV+KA R+ + G +H
Sbjct: 71 FMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHC 130
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV----------------- 184
A+K GL+ LFVG L+ Y C VE +RKVF+EM Q ++V
Sbjct: 131 QALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAG 190
Query: 185 --------------SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-------------- 216
SWN M++GY G ++ A +F +M DD+
Sbjct: 191 AREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSF 250
Query: 217 ---------------APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
+P+ +L VL A +Q G +H ++ K G ++ + L
Sbjct: 251 NESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 262 ISLYANCGYISMARAIFDRISD-RTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
I +Y+ CG + MAR +F+ + + R I W ++I MHG +EA+ +F ++ G+ PD
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPD 370
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFI 379
G+ F+ LL ACSHAG++ +G D F M+ Y + HY C+VDL GR+G L+KA +FI
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
Query: 380 QSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQ 439
MPI P V+ LLGAC H NIELAE ++L LDPNN+G V+L+ Y AG+W+
Sbjct: 431 CQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWK 490
Query: 440 DAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEA 499
D A +RK++ IKK +S VE+ KF A ++ + E L+ + + EA
Sbjct: 491 DVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEA 550
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/430 (33%), Positives = 246/430 (57%), Gaps = 6/430 (1%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H + G ++D ++ LV+ Y +E A+KVFD++ R+ W V++KGY
Sbjct: 132 HGLAMKNGLDKDDYVAPSLVEMYA--QLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG-LDLDLFVG 155
E ++ MR G + T ++KACG A + G +HG +++ +D ++
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
+++ Y KC+ ++ +RK+F R++V W ++ISG+ +A LF M R +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
P+ TL +L + + + G +H Y+++ G+++D + I +YA CG I MAR
Sbjct: 310 --PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMAR 367
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
+FD + +R + W+++I +G++G +EAL F ++ + P+ V F+ LLSACSH+G
Sbjct: 368 TVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG 427
Query: 336 MLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGAL 394
+ +GW F++M YGV E HYAC+VDLLGRAG++ +A FI +MP++P + +GAL
Sbjct: 428 NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 395 LGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIK 454
L ACRIHK ++LA AEKL ++P + YV+L+ +Y DAG W+ VR+ + +
Sbjct: 488 LSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYR 547
Query: 455 KPIGYSSVEL 464
K +G S+ E+
Sbjct: 548 KHVGQSATEV 557
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 9/366 (2%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSA--R 80
+L KT + ++ HA+V++ G E + + + L + Y + L++A F+++ R
Sbjct: 13 ILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYI--QSNRLDFATSSFNRIPCWKR 70
Query: 81 DVFCWNVVIKGYANVGP--FAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
+ WN ++ GY+ +++ L +Y+ MR + + F +KAC + G
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGY 198
IHG A+K GLD D +V +LV YA+ +E+++KVF+E+P R+ V W ++ GY
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 199 VDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH-CYIVKTGMKLDPNL 257
D V + + R + A D TL+ ++ A G +H I ++ + L
Sbjct: 191 -DPEVFRLFCLMRDTGL-ALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 258 GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL 317
+ +I +Y C + AR +F+ DR + +W +I + A EA +F+Q++ +
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI 308
Query: 318 RPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
P+ +L +CS G L G + M G+ ++ +D+ R G+++ A
Sbjct: 309 LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMART 368
Query: 378 FIQSMP 383
MP
Sbjct: 369 VFDMMP 374
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 275/504 (54%), Gaps = 20/504 (3%)
Query: 6 RRLQQISVLRDSFYYTDLLH-LCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD 64
+R++++ D F + L+ C D IK+ H V GG + + V T +S
Sbjct: 129 KRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFV---TYYSK 185
Query: 65 SGL-EYARKVF---DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
GL A VF D+L RD WN +I Y A+AL +Y EM G + +T
Sbjct: 186 GGLLREAVSVFYGMDEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTL 243
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEA---SRKVFNE 177
VL A + G HG +K G + VG+ L+ FY+KC + S KVF E
Sbjct: 244 ASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 178 MPQRDIVSWNSMISGYTTNGYV-DDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKAD 235
+ D+V WN+MISGY+ N + ++AV F M R IG PD+ + V V A + +
Sbjct: 304 ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQR---IGHRPDDCSFVCVTSACSNLSS 360
Query: 236 IHAGYWIHCYIVKTGMKLDP-NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
IH +K+ + + ++ + LISLY G + AR +FDR+ + +N +I+
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIK 420
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVA 353
Y HGH EAL ++Q+++D+G+ P+ + F+ +LSAC+H G + +G + F TM ET+ +
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEK 413
HY+C++DLLGRAG L++A FI +MP +PG + ALLGACR HKN+ LAE A +
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANE 540
Query: 414 LFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGA 473
L V+ P A YV+LA MY DA +W++ A VRK++R I+K G S +E++ F A
Sbjct: 541 LMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVA 600
Query: 474 NDESHPYSAQIFETLQSLDRIMGK 497
D SHP ++ E L+ + + M K
Sbjct: 601 EDWSHPMIREVNEYLEEMMKKMKK 624
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 193/433 (44%), Gaps = 58/433 (13%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
DS + AR++FD++ D +N +I GYA+ A+ ++ MR G + +T +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ-RD 182
+ AC K +H +V G D V NA V++Y+K + + VF M + RD
Sbjct: 147 IAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDM-FRHDDIGAPDNATLVTVLPAFAQKADIHAGYW 241
VSWNSMI Y + A+ L+ +M F+ I D TL +VL A + G
Sbjct: 205 EVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI---DMFTLASVLNALTSLDHLIGGRQ 261
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCG---YISMARAIFDRISDRTIFVWNAIIRCYGM 298
H ++K G + ++GSGLI Y+ CG + + +F I + VWN +I Y M
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 299 HGH-AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQ-----GWDLFQTMETYGV 352
+ ++EA+ F+Q+ G RPD F+C+ SACS+ +Q G + + + +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMP----------------------------- 383
+ + A ++ L ++G+L+ A MP
Sbjct: 382 SVNNA----LISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQR 437
Query: 384 -----IQPGKNVYGALLGAC-RIHKNIELAEF--TAEKLFVLDPNNAGRYVILAQMYEDA 435
I P K + A+L AC K E E+ T ++ F ++P A Y + + A
Sbjct: 438 MLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP-EAEHYSCMIDLLGRA 496
Query: 436 GQWQDAARVRKAI 448
G+ ++A R A+
Sbjct: 497 GKLEEAERFIDAM 509
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 110/224 (49%), Gaps = 11/224 (4%)
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
++F N +V YAK ++ +R++F+E+PQ D VS+N++ISGY A++LF M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 211 RHDDIG-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
+ +G D TL ++ A + D+ +HC+ V G ++ + ++ Y+ G
Sbjct: 133 K---LGFEVDGFTLSGLIAACCDRVDLIKQ--LHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 270 YISMARAIF---DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
+ A ++F D + D WN++I YG H +AL+++++++ G + D
Sbjct: 188 LLREAVSVFYGMDELRDEV--SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 327 LLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAG 370
+L+A + L G + G ++ + ++D + G
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 226 VLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRT 285
+L + A++ D+ G +H VK+ + L + ++LY+ CG +S ARA F +
Sbjct: 15 LLKSVAER-DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 286 IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
+F +N I++ Y + + +QL D +PD V + L+S + A LF+
Sbjct: 74 VFSYNVIVKAYA----KDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 346 TMETYG 351
M G
Sbjct: 130 RMRKLG 135
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/489 (33%), Positives = 251/489 (51%), Gaps = 34/489 (6%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGL-EYARKVFDKLSARDVFCWNVVIKGY 92
KK H VV G + ++ LV Y+L GL + AR VFD+ DVF WN++I GY
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSL---CGLMDMARGVFDRRCKEDVFSWNLMISGY 211
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
+ + E++ + EM +P T VL AC + +H + +C + L
Sbjct: 212 NRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
+ NALV+ YA C E++ + ++F M RD++SW S++ GY G + A F M
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR 331
Query: 213 DDIG-----------------------------APDNATLVTVLPAFAQKADIHAGYWIH 243
D I PD T+V+VL A A + G WI
Sbjct: 332 DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIK 391
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
YI K +K D +G+ LI +Y CG A+ +F + R F W A++ +G Q
Sbjct: 392 TYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQ 451
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACI 362
EA+ +F Q+ D ++PD + +L +LSAC+H+GM+ Q F M + + + S HY C+
Sbjct: 452 EAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNA 422
VD+LGRAG +K+A E ++ MP+ P V+GALLGA R+H + +AE A+K+ L+P+N
Sbjct: 512 VDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNG 571
Query: 423 GRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSA 482
Y +L +Y +W+D VR+ I + IKK G+S +E+ +F A D+SH S
Sbjct: 572 AVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Query: 483 QIFETLQSL 491
+I+ L+ L
Sbjct: 632 EIYMKLEEL 640
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 209/459 (45%), Gaps = 80/459 (17%)
Query: 12 SVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYAR 71
S+ D + +L +CKTTD K+ H+Q + G +P KL + + YA
Sbjct: 29 SISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAY 88
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAER 131
K+F K+ DV WN +IKG++ V E + +Y M G TP+ +T+PF+L G +R
Sbjct: 89 KLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN--GLKR 146
Query: 132 ---ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
A G +H H VK GL +L+V NALV Y+ C ++ +R VF+ + D+ SWN
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
MISGY ++++ L +M R ++ +P + TL+ VL A ++ D +H Y+ +
Sbjct: 207 MISGYNRMKEYEESIELLVEMER--NLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSE 264
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ----- 303
+ L + L++ YA CG + +A IF + R + W +I++ Y G+ +
Sbjct: 265 CKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTY 324
Query: 304 --------------------------EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
E+L +F+++ AG+ PD + +L+AC+H G L
Sbjct: 325 FDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSL 384
Query: 338 AQGWDLFQTMETY------------GVAKSEAHYAC-----------------------I 362
G + ++TY G A + ++ C +
Sbjct: 385 EIG----EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 363 VDLLGRAGDLKKAVEF---IQSMPIQPGKNVYGALLGAC 398
V L G ++A++ +Q M IQP Y +L AC
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC 479
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 257/483 (53%), Gaps = 11/483 (2%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYT-LHSDSGLEYAR 71
D F + + C +++ K+ H+ + G D + LVD Y +D ++ R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCR 325
Query: 72 KVFDKLSARDVFCWNVVIKGY-ANVGPFAEALNVYDEMRCAG-TTPNRYTYPFVLKACGA 129
KVFD++ V W +I GY N EA+N++ EM G PN +T+ KACG
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+ G + G A K GL + V N+++S + K +E +++ F + ++++VS+N+
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
+ G N + A L ++ + +G T ++L A I G IH +VK
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERE-LGVS-AFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
G+ + + + LIS+Y+ CG I A +F+ + +R + W ++I + HG A L F
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETF 563
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGR 368
Q+++ G++P+ V ++ +LSACSH G++++GW F +M E + + HYAC+VDLL R
Sbjct: 564 NQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 369 AGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVIL 428
AG L A EFI +MP Q V+ LGACR+H N EL + A K+ LDPN Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 429 AQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETL 488
+ +Y AG+W+++ +R+ ++E ++ K G S +E+ KF D +HP + QI++ L
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDEL 743
Query: 489 QSL 491
L
Sbjct: 744 DRL 746
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 191/419 (45%), Gaps = 25/419 (5%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
DS ++ LL C K HA+++ E D + L+ Y+ DS A
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSA--KAED 118
Query: 73 VFD---KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
VF+ + RDV W+ ++ Y N G +A+ V+ E G PN Y Y V++AC
Sbjct: 119 VFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN 178
Query: 130 ERASQKGHAIHGHAVKCG-LDLDLFVGNALVSFYAKCQ-EVEASRKVFNEMPQRDIVSWN 187
G G +K G + D+ VG +L+ + K + E + KVF++M + ++V+W
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 188 SMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIV 247
MI+ G+ +A+ F DM D TL +V A A+ ++ G +H + +
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSG--FESDKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 248 KTGMKLDPNLGSGLISLYANC---GYISMARAIFDRISDRTIFVWNAIIRCYGMHGH-AQ 303
++G+ D + L+ +YA C G + R +FDR+ D ++ W A+I Y + + A
Sbjct: 297 RSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 304 EALSMFQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
EA+++F +++ G + P+ F AC + G + G+A + + +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIE-----LAEFTAEKLFV 416
+ + ++ ++ A +S+ + + L G CR + N E L+E T +L V
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR-NLNFEQAFKLLSEITERELGV 472
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 176/383 (45%), Gaps = 16/383 (4%)
Query: 10 QISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVG-----GH-EQDPFIVAKLVDKYTLHS 63
++ ++ + + YT ++ C +D + +V +G GH E D + L+D + +
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFV--GVGRVTLGFLMKTGHFESDVCVGCSLIDMF-VKG 215
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
++ E A KVFDK+S +V W ++I +G EA+ + +M +G +++T V
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSV 275
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQ---EVEASRKVFNEMPQ 180
AC G +H A++ GL D V +LV YAKC V+ RKVF+ M
Sbjct: 276 FSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 181 RDIVSWNSMISGYTTN-GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
++SW ++I+GY N +A+ LF +M + P++ T + A +D G
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV-EPNHFTFSSAFKACGNLSDPRVG 392
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
+ K G+ + ++ + +IS++ + A+ F+ +S++ + +N + +
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
+ ++A + ++ + L F LLS ++ G + +G + + G++ ++
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 360 ACIVDLLGRAGDLKKAVEFIQSM 382
++ + + G + A M
Sbjct: 513 NALISMYSKCGSIDTASRVFNFM 535
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
D+ D I D+ T ++L + + D G +H +++ ++ D L + LISLY+
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 268 CGYISMARAIFD---RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVF 324
G + A +F+ R R + W+A++ CYG +G +A+ +F + ++ GL P+ +
Sbjct: 110 SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 325 LCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYAC-IVDLL 366
++ ACS++ + G + G +S+ C ++D+
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMF 212
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 289 bits (739), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 278/565 (49%), Gaps = 106/565 (18%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWN 86
C + +K+ HAQ++ +D I KL+ +L + L A +VF+++ +V N
Sbjct: 29 CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQVQEPNVHLCN 86
Query: 87 VVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKC 146
+I+ +A +A V+ EM+ G + +TYPF+LKAC + +H H K
Sbjct: 87 SLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 147 GLDLDLFVGNALVSFYAKCQ---------------------------------EVEASRK 173
GL D++V NAL+ Y++C E+ +R+
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 174 VFNEMPQRDIVSWNS-------------------------------MISGYTTNGYVDDA 202
+F+EMPQRD++SWN+ M+ GY+ G ++ A
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD-------- 254
++F M + A + T ++ +A+K + + +V +G+K D
Sbjct: 267 RVMFDKM----PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISIL 322
Query: 255 ---------------------PNLGS------GLISLYANCGYISMARAIFDRISDRTIF 287
NLGS L+ +YA CG + A +F+ I + +
Sbjct: 323 AACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLV 382
Query: 288 VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM 347
WN ++ G+HGH +EA+ +F ++ G+RPD V F+ +L +C+HAG++ +G D F +M
Sbjct: 383 SWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM 442
Query: 348 E-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIEL 406
E Y + HY C+VDLLGR G LK+A++ +Q+MP++P ++GALLGACR+H +++
Sbjct: 443 EKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDI 502
Query: 407 AEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELES 466
A+ + L LDP + G Y +L+ +Y A W+ A +R ++ ++KP G SSVELE
Sbjct: 503 AKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELED 562
Query: 467 GHRKFGANDESHPYSAQIFETLQSL 491
G +F D+SHP S QI++ L SL
Sbjct: 563 GIHEFTVFDKSHPKSDQIYQMLGSL 587
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 153/463 (33%), Positives = 253/463 (54%), Gaps = 11/463 (2%)
Query: 7 RLQQISVLRDSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHS 63
R+++ +VL + + Y L+ C ++ + H +V G E +V L+D Y
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
D + AR+VF++ S D+ W +I GY + G EAL+++ +M+ PN T V
Sbjct: 292 D--ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
L CG + G ++HG ++K G+ D V NALV YAKC + ++ VF ++DI
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 408
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
V+WNS+ISG++ NG + +A+ LF+ M + + P+ T+ ++ A A + G +H
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRM--NSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 244 CYIVKTGMKLDPNL--GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
Y VK G ++ G+ L+ YA CG AR IFD I ++ W+A+I YG G
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYA 360
+L +F++++ +P+ F +LSAC H GM+ +G F +M + Y S HY
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
C+VD+L RAG+L++A++ I+ MPIQP +GA L C +H +L E +K+ L P+
Sbjct: 587 CMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPD 646
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVE 463
+A YV+++ +Y G+W A VR +++ + K G+S++E
Sbjct: 647 DASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 183/365 (50%), Gaps = 11/365 (3%)
Query: 16 DSFYYTDLLHLC---KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D ++ L C + D+ KK H Q+V D ++ L+D Y + ++ A K
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLV-KVPSFDNVVLTGLLDMYAKCGE--IKSAHK 197
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
VF+ ++ R+V CW +I GY E L +++ MR N YTY ++ AC A
Sbjct: 198 VFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSA 257
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
+G HG VK G++L + +L+ Y KC ++ +R+VFNE D+V W +MI G
Sbjct: 258 LHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVG 317
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
YT NG V++A+ LF M + +I P+ T+ +VL ++ G +H +K G+
Sbjct: 318 YTHNGSVNEALSLFQKM-KGVEI-KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI- 374
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
D N+ + L+ +YA C A+ +F+ S++ I WN+II + +G EAL +F ++
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG-VAKSEAHY-ACIVDLLGRAG 370
+ P+GV L SAC+ G LA G L G +A S H ++D + G
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 371 DLKKA 375
D + A
Sbjct: 495 DPQSA 499
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 5/309 (1%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
LL C DS++++H + G D I KLV Y + + AR VFD++ D
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYT--KDARLVFDQIPEPDF 107
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
+ W V+++ Y E + +YD + G + + LKAC + G IH
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
VK D V L+ YAKC E++++ KVFN++ R++V W SMI+GY N ++
Sbjct: 168 LVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
++LF M ++ +G + T T++ A + + +H G W H +VK+G++L L + L+
Sbjct: 227 LVLFNRMRENNVLG--NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 263 SLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
+Y CG IS AR +F+ S + +W A+I Y +G EALS+FQ++ ++P+ V
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 323 VFLCLLSAC 331
+LS C
Sbjct: 345 TIASVLSGC 353
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%)
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
H + G+ D ++ + L+SLY GY AR +FD+I + ++W ++RCY ++ +
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKES 123
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
E + ++ L+ G R D +VF L AC+ L G
Sbjct: 124 VEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/446 (32%), Positives = 245/446 (54%), Gaps = 5/446 (1%)
Query: 55 LVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT 114
L+D Y D + AR VF+ + +D WN +I GY G EA+ ++ M
Sbjct: 348 LIDVYAKCGD--MITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
+ TY ++ + G +H + +K G+ +DL V NAL+ YAKC EV S K+
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 175 FNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA 234
F+ M D V+WN++IS G + + M + + + PD AT + LP A A
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVV--PDMATFLVTLPMCASLA 523
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
G IHC +++ G + + +G+ LI +Y+ CG + + +F+R+S R + W +I
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVA 353
YGM+G ++AL F + +G+ PD VVF+ ++ ACSH+G++ +G F+ M+T Y +
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKID 643
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEK 413
HYAC+VDLL R+ + KA EFIQ+MPI+P +++ ++L ACR ++E AE + +
Sbjct: 644 PMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRR 703
Query: 414 LFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGA 473
+ L+P++ G ++ + Y +W + +RK++++ I K GYS +E+ F +
Sbjct: 704 IIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSS 763
Query: 474 NDESHPYSAQIFETLQSLDRIMGKEA 499
D+S P S I+++L+ L +M KE
Sbjct: 764 GDDSAPQSEAIYKSLEILYSLMAKEG 789
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 212/397 (53%), Gaps = 15/397 (3%)
Query: 31 DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLS-ARDVFCWNVVI 89
+ +++ HA V+ G + F KL+DKY+ + + VF ++S A++V+ WN +I
Sbjct: 21 NELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLS--VFRRVSPAKNVYLWNSII 78
Query: 90 KGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLD 149
+ ++ G F EAL Y ++R + +P++YT+P V+KAC ++ G ++ + G +
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 150 LDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
DLFVGNALV Y++ + +R+VF+EMP RD+VSWNS+ISGY+++GY ++A+ +++++
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
+ PD+ T+ +VLPAF + G +H + +K+G+ + +GL+++Y
Sbjct: 199 --KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFR 256
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
+ AR +FD + R +N +I Y +E++ MF + +D +PD + +L
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLR 315
Query: 330 ACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM------- 382
AC H L+ ++ M G ++D+ + GD+ A + SM
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 383 --PIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL 417
I G G L+ A ++ K + + E A+ + L
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 201/396 (50%), Gaps = 11/396 (2%)
Query: 7 RLQQISVLRDSFYYTDLLHLCK---TTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHS 63
+L++ V D + + ++ C + + Q++ G E D F+ LVD Y+
Sbjct: 96 KLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMG 155
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
L AR+VFD++ RD+ WN +I GY++ G + EAL +Y E++ + P+ +T V
Sbjct: 156 --LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
L A G ++G +HG A+K G++ + V N LV+ Y K + +R+VF+EM RD
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
VS+N+MI GY V+++V +F + D PD T+ +VL A D+ +I+
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENL---DQFKPDLLTVSSVLRACGHLRDLSLAKYIY 330
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
Y++K G L+ + + LI +YA CG + AR +F+ + + WN+II Y G
Sbjct: 331 NYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLM 390
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
EA+ +F+ ++ + D + +L L+S + L G L G+ + ++
Sbjct: 391 EAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALI 450
Query: 364 DLLGRAGDLKKAVEFIQSMPIQPGKNV-YGALLGAC 398
D+ + G++ +++ SM G V + ++ AC
Sbjct: 451 DMYAKCGEVGDSLKIFSSM--GTGDTVTWNTVISAC 484
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 3/229 (1%)
Query: 116 NRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVF 175
R + PF+ +A + + IH + GLD F L+ Y+ +E +S VF
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 176 NEM-PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA 234
+ P +++ WNS+I ++ NG +A L FY R + +PD T +V+ A A
Sbjct: 63 RRVSPAKNVYLWNSIIRAFSKNGLFPEA-LEFYGKLRESKV-SPDKYTFPSVIKACAGLF 120
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
D G ++ I+ G + D +G+ L+ +Y+ G ++ AR +FD + R + WN++I
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
Y HG+ +EAL ++ +L ++ + PD +L A + ++ QG L
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/458 (33%), Positives = 247/458 (53%), Gaps = 38/458 (8%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG- 128
AR+ FD ++ RDV WN +I GYA G EA ++DE +P + + + G
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------SPVQDVFTWTAMVSGY 291
Query: 129 ----------------AERASQKGHA-----IHGHAVKCGLDL-------DLFVGNALVS 160
ER +A + G ++ +L ++ N +++
Sbjct: 292 IQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
Query: 161 FYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
YA+C ++ ++ +F++MP+RD VSW +MI+GY+ +G+ +A+ LF M R G +
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG--GRLNR 409
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR 280
++ + L A + G +H +VK G + +G+ L+ +Y CG I A +F
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 281 ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
++ + I WN +I Y HG + AL F+ + GL+PD + +LSACSH G++ +G
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKG 529
Query: 341 WDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACR 399
F TM + YGV + HYAC+VDLLGRAG L+ A +++MP +P ++G LLGA R
Sbjct: 530 RQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASR 589
Query: 400 IHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGY 459
+H N ELAE A+K+F ++P N+G YV+L+ +Y +G+W D ++R +R+ +KK GY
Sbjct: 590 VHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGY 649
Query: 460 SSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGK 497
S +E+++ F DE HP +IF L+ LD M K
Sbjct: 650 SWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKK 687
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 168/393 (42%), Gaps = 40/393 (10%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM--------------- 108
+ L AR++F+ + RDV WN ++ GYA G +A +V+D M
Sbjct: 139 NRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAY 198
Query: 109 -------RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL-DLFVGNALVS 160
+R + V C +K + +++ D+ N +++
Sbjct: 199 VQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258
Query: 161 FYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
YA+ +++ +R++F+E P +D+ +W +M+SGY N V++A LF M +++ N
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSW--N 316
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR 280
A L + + + C V T + +I+ YA CG IS A+ +FD+
Sbjct: 317 AMLAGYVQGERMEMAKELFDVMPCRNVST--------WNTMITGYAQCGKISEAKNLFDK 368
Query: 281 ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
+ R W A+I Y GH+ EAL +F Q+ G R + F LS C+ L G
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELG 428
Query: 341 WDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNV--YGALLGAC 398
L + G ++ + + G +++A + + M GK++ + ++
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM---AGKDIVSWNTMIAGY 485
Query: 399 RIH--KNIELAEFTAEKLFVLDPNNAGRYVILA 429
H + L F + K L P++A +L+
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 157/400 (39%), Gaps = 81/400 (20%)
Query: 2 RGVSRRLQQISVLRDSFYYTDLLHLCKTTD---------SIKKAHAQVVVGGHEQDPFIV 52
R +SRR QQ+ +YT L L + + S+K+A Q + + P +
Sbjct: 7 RALSRRAQQL-------HYTSLNGLKRRCNNAHGAANFHSLKRA-TQTQIQKSQTKPLLK 58
Query: 53 AKLVD--KYTLHSDSGLEYAR-----KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVY 105
D ++ + S + R +VF ++ +N +I GY G F A ++
Sbjct: 59 CGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 106 DEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKC 165
DEM P R DL N ++ Y +
Sbjct: 119 DEM------PER---------------------------------DLVSWNVMIKGYVRN 139
Query: 166 QEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVT 225
+ + +R++F MP+RD+ SWN+M+SGY NG VDDA +F M +D+ +
Sbjct: 140 RNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV------SWNA 193
Query: 226 VLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRT 285
+L A+ Q + + C + K+ + L+ + I AR FD ++ R
Sbjct: 194 LLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD 249
Query: 286 IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
+ WN II Y G EA +QL D D + ++S M+ + +LF
Sbjct: 250 VVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 346 TMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
M ++E + ++ + ++ A E MP +
Sbjct: 306 KMPE----RNEVSWNAMLAGYVQGERMEMAKELFDVMPCR 341
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 262/509 (51%), Gaps = 71/509 (13%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
L CK ++K+ HA +VV G + +V +L+ +L L+YA K+FD++ DV
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
N V++G A + +++Y EM G +P+RYT+ FVLKAC G A HG
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQE-------------------------------VEAS 171
V+ G L+ +V NAL+ F+A C + ++ +
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 172 RKVFNEMP-------------------------------QRDIVSWNSMISGYTTNGYVD 200
++F+EMP ++D+V+WN+MISGY GY
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTG-----MKLDP 255
+A+ +F +M D PD T++++L A A D+ G +H YI++T + +
Sbjct: 258 EALGIFKEM--RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+ + LI +YA CG I A +F + DR + WN +I +H HA+ ++ MF+++
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRL 374
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKK 374
+ P+ V F+ ++ ACSH+G + +G F M + Y + + HY C+VD+LGRAG L++
Sbjct: 375 KVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEE 434
Query: 375 AVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYED 434
A F++SM I+P V+ LLGAC+I+ N+EL ++ EKL + + +G YV+L+ +Y
Sbjct: 435 AFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYAS 494
Query: 435 AGQWQDAARVRKAIRENDIKKPIGYSSVE 463
GQW +VRK + +KKP G S +E
Sbjct: 495 TGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 254/505 (50%), Gaps = 67/505 (13%)
Query: 63 SDSGLEYARKVFDKLSARDVFCW--------------------------------NVVIK 90
S S L ARKVFD++ +D W N +I
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMIS 259
Query: 91 GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL 150
GY N G + EAL + M +G + +TYP V++AC Q G +H + ++ D
Sbjct: 260 GYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-REDF 318
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
N+LVS Y KC + + +R +F +MP +D+VSWN+++SGY ++G++ +A L+F +M
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 211 RHDDIG-----------------------------APDNATLVTVLPAFAQKADIHAGYW 241
+ + P + + + A G
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
H ++K G + G+ LI++YA CG + AR +F + WNA+I G HGH
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYA 360
EA+ ++++++ G+RPD + L +L+ACSHAG++ QG F +MET Y + HYA
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
++DLL R+G A I+S+P +P ++ ALL CR+H N+EL A+KLF L P
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPY 480
+ G Y++L+ M+ GQW++ ARVRK +R+ +KK + S +E+E+ F +D SHP
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 481 SAQIFETLQSLDRIMGKEAQTLNFL 505
+ ++ LQ L GKE + L ++
Sbjct: 679 AEAVYIYLQDL----GKEMRRLGYV 699
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 174/405 (42%), Gaps = 80/405 (19%)
Query: 20 YTDLLHLC----KTTDSIKKA-HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVF 74
Y L LC +T+ + +A H ++ G + I+ +L+D Y S+ L YAR++F
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSE--LNYARQLF 72
Query: 75 DKLSA---------------------------------RDVFCWNVVIKGYANVGPFAEA 101
D++S RD +N +I G+++ A
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 102 LNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA-IHGHAVKCGLDLDLFVGNALVS 160
+N++ +M+ G P+ +T+ VL +K H A+K G V NALVS
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVS 192
Query: 161 FYAKCQE----VEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
Y+KC + ++RKVF+E+ ++D SW +M++GY NGY D L M + +
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 217 A------------------------------PDNATLVTVLPAFAQKADIHAGYWIHCYI 246
A D T +V+ A A + G +H Y+
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
++ + + L+SLY CG ARAIF+++ + + WNA++ Y GH EA
Sbjct: 313 LRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAK 371
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG 351
+F+++ + + + ++ ++S + G +G LF M+ G
Sbjct: 372 LIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCMKREG 412
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 161/366 (43%), Gaps = 61/366 (16%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDS 65
RR+ + D F Y ++ C T A ++ G + +++ + + ++ H D+
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACAT--------AGLLQLGKQVHAYVLRR--EDFSFHFDN 324
Query: 66 GL----------EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR------ 109
L + AR +F+K+ A+D+ WN ++ GY + G EA ++ EM+
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 110 ----------------------C---AGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
C G P Y + +K+C A G H +
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVL 204
K G D L GNAL++ YAKC VE +R+VF MP D VSWN++I+ +G+ +AV
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 205 LFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLG--SGLI 262
++ +M + PD TL+TVL A + + G + ++T ++ P + LI
Sbjct: 505 VYEEMLKKGI--RPDRITLLTVLTACSHAGLVDQGR-KYFDSMETVYRIPPGADHYARLI 561
Query: 263 SLYANCGYISMARAIFDRISDR-TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRP-- 319
L G S A ++ + + + T +W A++ +HG+ + + +L GL P
Sbjct: 562 DLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEH 619
Query: 320 DGVVFL 325
DG L
Sbjct: 620 DGTYML 625
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 133/341 (39%), Gaps = 75/341 (21%)
Query: 116 NRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVF 175
NRY L + Q A+HG+ + G + N L+ Y K E+ +R++F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 176 NEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM----------------FRHDDIG--- 216
+E+ + D ++ +M+SGY +G + A +F F H++ G
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 217 ------------APDNATLVTVLPAFAQKADIHAG-YWIHCYIVKTGMKLDPNLGSGLIS 263
PDN T +VL A AD H +K+G ++ + L+S
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVS 192
Query: 264 LYANCG----YISMARAIFDRISDRTIFVW------------------------------ 289
+Y+ C + AR +FD I ++ W
Sbjct: 193 VYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLV 252
Query: 290 --NAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM 347
NA+I Y G QEAL M +++V +G+ D + ++ AC+ AG+L G + +
Sbjct: 253 AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG----KQV 308
Query: 348 ETYGVAKSEAHY---ACIVDLLGRAGDLKKAVEFIQSMPIQ 385
Y + + + + +V L + G +A + MP +
Sbjct: 309 HAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK 349
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 272/527 (51%), Gaps = 47/527 (8%)
Query: 8 LQQISVLRDS----FYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHS 63
+Q+I+ L S ++ T L ++K++H +++ G +D VAK ++ S
Sbjct: 2 IQRINALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEAC---S 58
Query: 64 DSG-LEYARKVFDKLSARDVFCWNVVIKGYANVG-PFAE--ALNVYDEMRCAGTTPNRYT 119
++G L YA VF + + N +I+ + + P A A+ VY ++ P+ +T
Sbjct: 59 NAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFT 118
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
+PFVLK G IHG V G D + V L+ Y C + +RK+F+EM
Sbjct: 119 FPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEML 178
Query: 180 QRDI---------------------------------VSWNSMISGYTTNGYVDDAVLLF 206
+D+ VSW +ISGY +G +A+ +F
Sbjct: 179 VKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVF 238
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA 266
M + PD TL+ VL A A + G I Y+ GM +L + +I +YA
Sbjct: 239 QRMLMENV--EPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYA 296
Query: 267 NCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
G I+ A +F+ +++R + W II HGH EAL+MF ++V AG+RP+ V F+
Sbjct: 297 KSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIA 356
Query: 327 LLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+LSACSH G + G LF +M + YG+ + HY C++DLLGRAG L++A E I+SMP +
Sbjct: 357 ILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFK 416
Query: 386 PGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVR 445
++G+LL A +H ++EL E +L L+PNN+G Y++LA +Y + G+W ++ +R
Sbjct: 417 ANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMR 476
Query: 446 KAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLD 492
++ +KK G SS+E+E+ KF + D +HP +I E LQ +D
Sbjct: 477 NMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMD 523
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 257/493 (52%), Gaps = 14/493 (2%)
Query: 18 FYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKV 73
F + +L C S K H+ VV G D VA + +++S SG L A K+
Sbjct: 112 FTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHD---VAAMTSLLSIYSGSGRLNDAHKL 168
Query: 74 FDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERAS 133
FD++ R V W + GY G EA++++ +M G P+ Y VL AC
Sbjct: 169 FDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDL 228
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
G I + + + + FV LV+ YAKC ++E +R VF+ M ++DIV+W++MI GY
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
+N + + + LF M + + PD ++V L + A + G W I +
Sbjct: 289 ASNSFPKEGIELFLQMLQEN--LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT 346
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+ + + LI +YA CG ++ +F + ++ I + NA I +GH + + ++F Q
Sbjct: 347 NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTE 406
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDL 372
G+ PDG FL LL C HAG++ G F + Y + ++ HY C+VDL GRAG L
Sbjct: 407 KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGML 466
Query: 373 KKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMY 432
A I MP++P V+GALL CR+ K+ +LAE ++L L+P NAG YV L+ +Y
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIY 526
Query: 433 EDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLD 492
G+W +AA VR + + +KK GYS +ELE +F A+D+SHP S +I+ L+ L
Sbjct: 527 SVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDL- 585
Query: 493 RIMGKEAQTLNFL 505
G E + + F+
Sbjct: 586 ---GNEMRLMGFV 595
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 211/428 (49%), Gaps = 8/428 (1%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
L+ + T + +K+ H ++ D F+V L+ + + +Y+ +F ++
Sbjct: 19 LISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQT--KYSYLLFSHTQFPNI 76
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
F +N +I G+ N F E L+++ +R G + +T+P VLKAC + + G +H
Sbjct: 77 FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
VKCG + D+ +L+S Y+ + + K+F+E+P R +V+W ++ SGYTT+G +A
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 203 VLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
+ LF M ++G PD+ +V VL A D+ +G WI Y+ + M+ + + + L
Sbjct: 197 IDLFKKMV---EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
++LYA CG + AR++FD + ++ I W+ +I+ Y + +E + +F Q++ L+PD
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 313
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
+ LS+C+ G L G ++ + + ++D+ + G + + E +
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 382 MPIQPGKNVYGALLGACRI-HKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQD 440
M + + A+ G + H + A F + + P+ + +L AG QD
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH-AGLIQD 432
Query: 441 AARVRKAI 448
R AI
Sbjct: 433 GLRFFNAI 440
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 264/494 (53%), Gaps = 16/494 (3%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSIKKAHA---QVVVGGHEQDPFIVAKLVDKYTLHSD 64
LQ + DS Y++L+ C + ++ + + + GH F+V L++ Y
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYV--KF 109
Query: 65 SGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVL 124
+ L A ++FD++ R+V W +I Y+ +AL + M PN YTY VL
Sbjct: 110 NLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVL 169
Query: 125 KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV 184
++C +H +K GL+ D+FV +AL+ +AK E E + VF+EM D +
Sbjct: 170 RSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHC 244
WNS+I G+ N D A+ LF M R I + ATL +VL A A + G H
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIA--EQATLTSVLRACTGLALLELGMQAHV 284
Query: 245 YIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQE 304
+IVK D L + L+ +Y CG + A +F+++ +R + W+ +I +G++QE
Sbjct: 285 HIVKYDQ--DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 305 ALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIV 363
AL +F+++ +G +P+ + + +L ACSHAG+L GW F++M+ YG+ HY C++
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 364 DLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAG 423
DLLG+AG L AV+ + M +P + LLGACR+ +N+ LAE+ A+K+ LDP +AG
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAG 462
Query: 424 RYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQ 483
Y +L+ +Y ++ +W +R +R+ IKK G S +E+ F D SHP Q
Sbjct: 463 TYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP---Q 519
Query: 484 IFETLQSLDRIMGK 497
I E + L++++ +
Sbjct: 520 IVEVSKKLNQLIHR 533
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 7/285 (2%)
Query: 98 FAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNA 157
A+ D ++ G + TY ++K C + RA +G+ I H G +F+ N
Sbjct: 42 LPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNV 101
Query: 158 LVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA 217
L++ Y K + + ++F++MPQR+++SW +MIS Y+ A+ L M R D
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR--DNVR 159
Query: 218 PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAI 277
P+ T +VL + +D+ +HC I+K G++ D + S LI ++A G A ++
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 278 FDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
FD + VWN+II + + + AL +F+++ AG + +L AC+ +L
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 276
Query: 338 AQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G + Y + +VD+ + G L+ A+ M
Sbjct: 277 ELGMQAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQM 319
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 255/443 (57%), Gaps = 9/443 (2%)
Query: 60 TLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYA-NVGPFAEALNVYDEMRCAGTTPNR 117
TL++++G L RK+F + D WN +I A + EA+ + + AG NR
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNR 517
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE 177
T+ VL A + + G IHG A+K + + NAL++ Y KC E++ K+F+
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSR 577
Query: 178 MPQR-DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI 236
M +R D V+WNSMISGY N + A+ L + M + D+ TVL AFA A +
Sbjct: 578 MAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ--RLDSFMYATVLSAFASVATL 635
Query: 237 HAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCY 296
G +H V+ ++ D +GS L+ +Y+ CG + A F+ + R + WN++I Y
Sbjct: 636 ERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGY 695
Query: 297 GMHGHAQEALSMFQQL-VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAK 354
HG +EAL +F+ + +D PD V F+ +LSACSHAG+L +G+ F++M ++YG+A
Sbjct: 696 ARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAP 755
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGAC-RIH-KNIELAEFTAE 412
H++C+ D+LGRAG+L K +FI+ MP++P ++ +LGAC R + + EL + AE
Sbjct: 756 RIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAE 815
Query: 413 KLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFG 472
LF L+P NA YV+L MY G+W+D + RK +++ D+KK GYS V ++ G F
Sbjct: 816 MLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFV 875
Query: 473 ANDESHPYSAQIFETLQSLDRIM 495
A D+SHP + I++ L+ L+R M
Sbjct: 876 AGDKSHPDADVIYKKLKELNRKM 898
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 173/388 (44%), Gaps = 11/388 (2%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSI-----KKAHAQVVVGGHEQDPFIVAKLVDKYT 60
R + + + + + + +L C+ S+ ++ H + + D + L+ Y
Sbjct: 91 RDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMY- 149
Query: 61 LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
+ YA F + ++ WN +I Y+ G A ++ M+ G+ P YT+
Sbjct: 150 WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTF 209
Query: 121 -PFVLKACG-AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM 178
V AC E + I K GL DLFVG+ LVS +AK + +RKVFN+M
Sbjct: 210 GSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAF--AQKADI 236
R+ V+ N ++ G + ++A LF DM D+ L++ P + A++ +
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL 329
Query: 237 HAGYWIHCYIVKTGM-KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
G +H +++ TG+ +G+GL+++YA CG I+ AR +F ++D+ WN++I
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITG 389
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKS 355
+G EA+ ++ + + P + LS+C+ G + G+ +
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 449
Query: 356 EAHYACIVDLLGRAGDLKKAVEFIQSMP 383
+ ++ L G L + + SMP
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 4/318 (1%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
AR+VF ++ +D WN +I G G F EA+ Y MR P +T L +C +
Sbjct: 368 ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCAS 427
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+ ++ G IHG ++K G+DL++ V NAL++ YA+ + RK+F+ MP+ D VSWNS+
Sbjct: 428 LKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSI 487
Query: 190 ISGYT-TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
I + + +AV+ F + R + T +VL A + + G IH +K
Sbjct: 488 IGALARSERSLPEAVVCFLNAQRAGQ--KLNRITFSSVLSAVSSLSFGELGKQIHGLALK 545
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV-WNAIIRCYGMHGHAQEALS 307
+ + + LI+ Y CG + IF R+++R V WN++I Y + +AL
Sbjct: 546 NNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALD 605
Query: 308 MFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLG 367
+ ++ G R D ++ +LSA + L +G ++ + + +VD+
Sbjct: 606 LVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYS 665
Query: 368 RAGDLKKAVEFIQSMPIQ 385
+ G L A+ F +MP++
Sbjct: 666 KCGRLDYALRFFNTMPVR 683
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 138/283 (48%), Gaps = 10/283 (3%)
Query: 48 DPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDE 107
D F+ + LV + L YARKVF+++ R+ N ++ G EA ++ +
Sbjct: 242 DLFVGSGLVSAFA--KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMD 299
Query: 108 MRCA-GTTPNRYTY---PFVLKACGAERASQKGHAIHGHAVKCGL-DLDLFVGNALVSFY 162
M +P Y F + E +KG +HGH + GL D + +GN LV+ Y
Sbjct: 300 MNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359
Query: 163 AKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNAT 222
AKC + +R+VF M +D VSWNSMI+G NG +AV + M RHD + P + T
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL--PGSFT 417
Query: 223 LVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRIS 282
L++ L + A G IH +K G+ L+ ++ + L++LYA GY++ R IF +
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 283 DRTIFVWNAIIRCYGMHGHA-QEALSMFQQLVDAGLRPDGVVF 324
+ WN+II + EA+ F AG + + + F
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 140/299 (46%), Gaps = 18/299 (6%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H+++ ++D ++ L++ Y DS ARKVFD++ R+ W ++ GY+ G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDS--VSARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK---GHAIHGHAVKCGLDLDLF 153
EAL +M G N+Y + VL+AC E S G IHG K +D
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRAC-QEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 154 VGNALVSFYAKC-QEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
V N L+S Y KC V + F ++ ++ VSWNS+IS Y+ G A +F M
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM--Q 198
Query: 213 DDIGAPDNAT---LVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
D P T LVT + + D+ I C I K+G+ D +GSGL+S +A G
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTE-PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF---QQLVDAGLRPDGVVFL 325
+S AR +F+++ R N ++ +EA +F ++D + P+ V L
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID--VSPESYVIL 314
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 15/284 (5%)
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
+++C R + + H K LD D+++ N L++ Y + + ++RKVF+EMP R+
Sbjct: 10 VQSCVGHRGAAR--FFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC 67
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQ--KADIHAGYW 241
VSW ++SGY+ NG +A++ DM + + V+VL A + I G
Sbjct: 68 VSWACIVSGYSRNGEHKEALVFLRDMVKEGIF--SNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANC-GYISMARAIFDRISDRTIFVWNAIIRCYGMHG 300
IH + K +D + + LIS+Y C G + A F I + WN+II Y G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 301 HAQEALSMFQQLVDAGLRPDGVVFLCLL-SACS----HAGMLAQGWDLFQTMETYGVAKS 355
+ A +F + G RP F L+ +ACS +L Q + T++ G+
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQ---IMCTIQKSGLLTD 242
Query: 356 EAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACR 399
+ +V ++G L A + M + + G ++G R
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 158/509 (31%), Positives = 272/509 (53%), Gaps = 44/509 (8%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGG---HEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSA 79
L+ ++ D + + HA ++ H + P + KL Y H + ++ +F +
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGK--IRHSLALFHQTID 92
Query: 80 RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAI 139
D+F + I + G +A +Y ++ + PN +T+ +LK+C +++ G I
Sbjct: 93 PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLI 148
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP-------------------- 179
H H +K GL +D +V LV YAK +V +++KVF+ MP
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 180 -----------QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLP 228
+RDIVSWN MI GY +G+ +DA++LF + PD T+V L
Sbjct: 209 EAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK-PKPDEITVVAALS 267
Query: 229 AFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV 288
A +Q + G WIH ++ + ++L+ + +GLI +Y+ CG + A +F+ + I
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVD-AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM 347
WNA+I Y MHG++Q+AL +F ++ GL+P + F+ L AC+HAG++ +G +F++M
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 348 -ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIEL 406
+ YG+ HY C+V LLGRAG LK+A E I++M + ++ ++LG+C++H + L
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVL 447
Query: 407 AEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELES 466
+ AE L L+ N+G YV+L+ +Y G ++ A+VR ++E I K G S++E+E+
Sbjct: 448 GKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIEN 507
Query: 467 GHRKFGANDESHPYSAQIFETLQSL-DRI 494
+F A D H S +I+ L+ + +RI
Sbjct: 508 KVHEFRAGDREHSKSKEIYTMLRKISERI 536
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 154/342 (45%), Gaps = 34/342 (9%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKY---------------- 59
+ F ++ LL C +T S K H V+ G DP++ LVD Y
Sbjct: 129 NEFTFSSLLKSC-STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 60 ------------TLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYD 106
T ++ G +E AR +FD + RD+ WNV+I GYA G +AL ++
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 107 EMRCAGT-TPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKC 165
++ G P+ T L AC A + G IH + L++ V L+ Y+KC
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 166 QEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVT 225
+E + VFN+ P++DIV+WN+MI+GY +GY DA+ LF +M + P + T +
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGL-QPTDITFIG 366
Query: 226 VLPAFAQKADIHAGYWIHCYIVKT-GMKLDPNLGSGLISLYANCGYISMARAIFDRIS-D 283
L A A ++ G I + + G+K L+SL G + A ++ D
Sbjct: 367 TLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMD 426
Query: 284 RTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
+W++++ +HG + + L+ ++ G+ L
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVL 468
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 281 bits (719), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 257/493 (52%), Gaps = 11/493 (2%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVG---GHEQDPFIVAKLVDKYTLH 62
R ++ + DS L+ S+K A VG G + + + Y
Sbjct: 142 REMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC 201
Query: 63 SDSGLEYARKVFDKLSA--RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
D L+ A+ VF+ + R V WN + K Y+ G +A +Y M P+ T+
Sbjct: 202 GD--LDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
+ +C +G IH HA+ G D D+ N +S Y+K ++ ++R +F+ M
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
R VSW MISGY G +D+A+ LF+ M + + PD TL++++ + + G
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE--KPDLVTLLSLISGCGKFGSLETGK 377
Query: 241 WIHCYIVKTGMKLDP-NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
WI G K D + + LI +Y+ CG I AR IFD ++T+ W +I Y ++
Sbjct: 378 WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAH 358
G EAL +F +++D +P+ + FL +L AC+H+G L +GW+ F M + Y ++ H
Sbjct: 438 GIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH 497
Query: 359 YACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD 418
Y+C+VDLLGR G L++A+E I++M +P ++GALL AC+IH+N+++AE AE LF L+
Sbjct: 498 YSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLE 557
Query: 419 PNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESH 478
P A YV +A +Y AG W AR+R +++ +IKK G S +++ + F + H
Sbjct: 558 PQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Query: 479 PYSAQIFETLQSL 491
+ I+ TL L
Sbjct: 618 VENEVIYFTLNGL 630
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 169/350 (48%), Gaps = 7/350 (2%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
HA ++ D F+ VD + + ++YA KVF+++ RD WN ++ G+ G
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFV--KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
+A +++ EMR TP+ T ++++ E++ + A+H ++ G+D+ + V N
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQ--RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD 214
+S Y KC ++++++ VF + + R +VSWNSM Y+ G DA L+ M R +
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE- 251
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
PD +T + + + + G IH + + G D + IS+Y+ A
Sbjct: 252 -FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
R +FD ++ RT W +I Y G EAL++F ++ +G +PD V L L+S C
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 335 GMLAQGWDLFQTMETYGVAKSEAHYA-CIVDLLGRAGDLKKAVEFIQSMP 383
G L G + + YG + ++D+ + G + +A + + P
Sbjct: 371 GSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 148/274 (54%), Gaps = 8/274 (2%)
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
R+++ V WN+ I+ N E+L ++ EM+ G PN +T+PFV KAC
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA-- 63
Query: 131 RASQKG--HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
R + G +H H +K D+FVG A V + KC V+ + KVF MP+RD +WN+
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
M+SG+ +G+ D A LF +M R ++I PD+ T++T++ + + + + +H ++
Sbjct: 124 MLSGFCQSGHTDKAFSLFREM-RLNEI-TPDSVTVMTLIQSASFEKSLKLLEAMHAVGIR 181
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRIS--DRTIFVWNAIIRCYGMHGHAQEAL 306
G+ + + + IS Y CG + A+ +F+ I DRT+ WN++ + Y + G A +A
Sbjct: 182 LGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAF 241
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
++ ++ +PD F+ L ++C + L QG
Sbjct: 242 GLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 151/499 (30%), Positives = 268/499 (53%), Gaps = 39/499 (7%)
Query: 31 DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIK 90
+ +K+ + ++V G F+ KL+ TL L YAR +FD+ S + + V+
Sbjct: 38 NHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRL-CNLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 91 GYANVGPF--AEALNVYDEMRCAGTT-PNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
Y++ P + A + + M PN + YP VLK+ ++ +H H K G
Sbjct: 97 AYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSG 156
Query: 148 LDLDLFVGNALVSFYAK-CQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF 206
L + V AL+ YA + +R++F+EM +R++VSW +M+SGY +G + +AV LF
Sbjct: 157 FHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALF 216
Query: 207 YDM---------------------------FR---HDDIGAPDNATLVTVLPAFAQKADI 236
DM FR ++ P+ T+V VL A AQ +
Sbjct: 217 EDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 237 HAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCY 296
IH + + + D + + L+ LY CG + A ++F S +++ WN++I C+
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCF 336
Query: 297 GMHGHAQEALSMFQQLVDAGL---RPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGV 352
+HG ++EA+++F++++ + +PD + F+ LL+AC+H G++++G F M +G+
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAE 412
HY C++DLLGRAG +A+E + +M ++ + ++G+LL AC+IH +++LAE +
Sbjct: 397 EPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVK 456
Query: 413 KLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFG 472
L L+PNN G ++A +Y + G W++A R RK I+ + KP G+S +E+++ +F
Sbjct: 457 NLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFY 516
Query: 473 ANDESHPYSAQIFETLQSL 491
+ D+SHP + +I+ L SL
Sbjct: 517 SLDKSHPETEEIYMILDSL 535
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 237/427 (55%), Gaps = 4/427 (0%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
+E A ++F + +D W +IKG A G EA+ + EM+ G ++Y + VL A
Sbjct: 221 IEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPA 279
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
CG A +G IH ++ ++VG+AL+ Y KC+ + ++ VF+ M Q+++VSW
Sbjct: 280 CGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSW 339
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
+M+ GY G ++AV +F DM R PD+ TL + A A + + G H
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGI--DPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+ +G+ + + L++LY CG I + +F+ ++ R W A++ Y G A E +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDL 365
+F ++V GL+PDGV ++SACS AG++ +G F+ M + YG+ S HY+C++DL
Sbjct: 458 QLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDL 517
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
R+G L++A+ FI MP P + LL ACR N+E+ ++ AE L LDP++ Y
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIF 485
+L+ +Y G+W A++R+ +RE ++KK G S ++ + F A+DES PY QI+
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIY 637
Query: 486 ETLQSLD 492
L+ L+
Sbjct: 638 AKLEELN 644
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 168/413 (40%), Gaps = 62/413 (15%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD----------------- 75
+K H ++ + F+ +V Y L S YAR+VFD
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSS--TYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 76 --------------KLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTY 120
KL RD WNV+I+GY+ G A+ Y+ M R R T
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
+LK + G IHG +K G + L VG+ L+ YA + ++KVF +
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDM--------------------------FRHDD 214
R+ V +NS++ G G ++DA+ LF M FR
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 215 IGA--PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
+ D +VLPA I+ G IH I++T + +GS LI +Y C +
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
A+ +FDR+ + + W A++ YG G A+EA+ +F + +G+ PD +SAC+
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 333 HAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+ L +G T G+ +V L G+ GD+ + M ++
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 153/338 (45%), Gaps = 40/338 (11%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
R ++ + D + + +L C +I K+ HA ++ + ++ + L+D Y
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC-- 316
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
L YA+ VFD++ ++V W ++ GY G EA+ ++ +M+ +G P+ YT
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+ AC + ++G HG A+ GL + V N+LV+ Y KC +++ S ++FNEM RD
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
VSW +M+S Y G + + LF M +H PD TL V+ A ++ + G
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL--KPDGVTLTGVISACSRAGLVEKGQR- 493
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
+ ++ + + P++G ++ +I + G
Sbjct: 494 YFKLMTSEYGIVPSIGH-----------------------------YSCMIDLFSRSGRL 524
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
+EA+ + PD + + LLSAC + G L G
Sbjct: 525 EEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIG 559
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 127/290 (43%), Gaps = 40/290 (13%)
Query: 120 YPFVLKAC---GAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFN 176
Y +K C GA S+ IHG+ ++ + F+ N +V YA + +R+VF+
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 177 EMPQRDIVSWNS-------------------------------MISGYTTNGYVDDAVLL 205
+PQ ++ SWN+ +I GY+ +G V AV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 206 FYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY 265
+ M R D TL+T+L + + G IH ++K G + +GS L+ +Y
Sbjct: 126 YNTMMR-DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMY 184
Query: 266 ANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
AN G IS A+ +F + DR ++N+++ G ++AL +F+ G+ D V +
Sbjct: 185 ANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWA 239
Query: 326 CLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
++ + G+ + + F+ M+ G+ + + ++ G G + +
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/446 (33%), Positives = 250/446 (56%), Gaps = 9/446 (2%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
L AR+VFD++ D WNV+I G AN G EA++V+ +MR +G P+ + +L A
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-DIVS 185
A +G IH + +K G DL V N+L++ Y C ++ +F + D VS
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
WN++++ + + + LF M + PD+ T+ +L + + + G +HCY
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSE--CEPDHITMGNLLRGCVEISSLKLGSQVHCY 498
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
+KTG+ + + +GLI +YA CG + AR IFD + +R + W+ +I Y G +EA
Sbjct: 499 SLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEA 558
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVD 364
L +F+++ AG+ P+ V F+ +L+ACSH G++ +G L+ TM+T +G++ ++ H +C+VD
Sbjct: 559 LILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVD 618
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR 424
LL RAG L +A FI M ++P V+ LL AC+ N+ LA+ AE + +DP N+
Sbjct: 619 LLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA 678
Query: 425 YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQI 484
+V+L M+ +G W++AA +R +++++D+KK G S +E+E F A D HP I
Sbjct: 679 HVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDI 738
Query: 485 FETL-----QSLDRIMGKEAQTLNFL 505
+ L Q LD + + L F+
Sbjct: 739 YTVLHNIWSQMLDECNPQHKKRLQFI 764
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 176/386 (45%), Gaps = 6/386 (1%)
Query: 20 YTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
Y L+ C ++ S+ +K H ++ + D + ++ Y L AR+VFD
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYG--KCGSLRDAREVFDF 127
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
+ R++ + VI GY+ G AEA+ +Y +M P+++ + ++KAC + G
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
+H +K L NAL++ Y + ++ + +VF +P +D++SW+S+I+G++
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G+ +A+ +M + P+ + L A + G IH +K+ + +
Sbjct: 248 GFEFEALSHLKEMLSF-GVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
G L +YA CG+++ AR +FD+I WN II +G+A EA+S+F Q+ +G
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAV 376
PD + LL A + L+QG + + +G ++ + DL
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 377 EFIQSMPIQPGKNVYGALLGACRIHK 402
+ + +L AC H+
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHE 452
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 122/237 (51%), Gaps = 4/237 (1%)
Query: 98 FAEALNVYDEMRCAGTTPNRY-TYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
+ EAL +D + + R TY ++ AC + R+ +G IH H + D + N
Sbjct: 47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
++S Y KC + +R+VF+ MP+R++VS+ S+I+GY+ NG +A+ L+ M + D +
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV- 165
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARA 276
PD +++ A A +D+ G +H ++K + LI++Y +S A
Sbjct: 166 -PDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 277 IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL-RPDGVVFLCLLSACS 332
+F I + + W++II + G EALS ++++ G+ P+ +F L ACS
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%)
Query: 222 TLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRI 281
T ++++ A + + G IH +I+ + K D L + ++S+Y CG + AR +FD +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 282 SDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGW 341
+R + + ++I Y +G EA+ ++ +++ L PD F ++ AC+ + + G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 342 DL 343
L
Sbjct: 189 QL 190
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/469 (34%), Positives = 257/469 (54%), Gaps = 12/469 (2%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
+KK HA V+ G + ++ +L++ + D + YAR+VFD++ +F WN + KGY
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGD--MCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 93 A-NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD 151
N PF E+L +Y +MR G P+ +TYPFV+KA G A+H H VK G
Sbjct: 85 VRNQLPF-ESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFR 211
V LV Y K E+ ++ +F M +D+V+WN+ ++ G + A+ L Y
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTG--NSAIALEYFNKM 201
Query: 212 HDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
D D+ T+V++L A Q + G I+ K + + + + + ++ CG
Sbjct: 202 CADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 272 SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
AR +F+ + R + W+ +I Y M+G ++EAL++F + + GLRP+ V FL +LSAC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 332 SHAGMLAQGWDLFQTM---ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGK 388
SHAG++ +G F M + + HYAC+VDLLGR+G L++A EFI+ MP++P
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 389 NVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAI 448
++GALLGAC +H+++ L + A+ L P+ +V+L+ +Y AG+W +VR +
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 449 RENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGK 497
R+ KK YSSVE E F D+SHP S I+E LD I+ K
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYE---KLDEILKK 487
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/468 (34%), Positives = 247/468 (52%), Gaps = 13/468 (2%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYT---LHSDSGLEYARKVFDKLSARDVFCWNVVIK 90
K+ HA V G D F+ D Y L D ARK+FD++ R++ WN I
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD-----ARKLFDEIPERNLETWNAFIS 182
Query: 91 GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL 150
G EA+ + E R PN T+ L AC G +HG ++ G D
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
D+ V N L+ FY KC+++ +S +F EM ++ VSW S+++ Y N + A +L+ +
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY--LR 300
Query: 211 RHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGY 270
DI + + +VL A A A + G IH + VK ++ +GS L+ +Y CG
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 271 ISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL--RPDGVVFLCLL 328
I + FD + ++ + N++I Y G AL++F+++ G P+ + F+ LL
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 329 SACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPG 387
SACS AG + G +F +M TYG+ HY+CIVD+LGRAG +++A EFI+ MPIQP
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 388 KNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKA 447
+V+GAL ACR+H +L AE LF LDP ++G +V+L+ + AG+W +A VR+
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 448 IRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIM 495
++ IKK GYS + +++ F A D SH + +I TL L M
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 4/335 (1%)
Query: 49 PFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM 108
PF+ L++ Y+ E AR V AR+V W +I G A G F+ AL + EM
Sbjct: 42 PFLANYLINMYSKLDHP--ESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 109 RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEV 168
R G PN +T+P KA + R G IH AVKCG LD+FVG + Y K +
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 169 EASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLP 228
+ +RK+F+E+P+R++ +WN+ IS T+G +A+ F + R D G P++ T L
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID--GHPNSITFCAFLN 217
Query: 229 AFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV 288
A + ++ G +H ++++G D ++ +GLI Y C I + IF + +
Sbjct: 218 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS 277
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
W +++ Y + ++A ++ + + + +LSAC+ L G +
Sbjct: 278 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 337
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
V ++ + +VD+ G+ G ++ + + MP
Sbjct: 338 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/479 (33%), Positives = 271/479 (56%), Gaps = 10/479 (2%)
Query: 23 LLHLCKTTDSIK--KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY-ARKVFDKLSA 79
LL +T +IK + H VV G P + L++ Y S S L + +R+ F+
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFY---SKSQLPFDSRRAFEDSPQ 78
Query: 80 RDVFCWNVVIKGYA-NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
+ W+ +I +A N P+ +L +M P+ + P K+C G +
Sbjct: 79 KSSTTWSSIISCFAQNELPWM-SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRS 137
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGY 198
+H ++K G D D+FVG++LV YAKC E+ +RK+F+EMPQR++V+W+ M+ GY G
Sbjct: 138 VHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGE 197
Query: 199 VDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLG 258
++A+ LF + + A ++ + +V+ A + G IH +K+ +G
Sbjct: 198 NEEALWLFKEALFEN--LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 259 SGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLR 318
S L+SLY+ CG A +F+ + + + +WNA+++ Y H H Q+ + +F+++ +G++
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 319 PDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEF 378
P+ + FL +L+ACSHAG++ +G F M+ + ++ HYA +VD+LGRAG L++A+E
Sbjct: 316 PNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEV 375
Query: 379 IQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQW 438
I +MPI P ++V+GALL +C +HKN ELA F A+K+F L P ++G ++ L+ Y G++
Sbjct: 376 ITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 439 QDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGK 497
+DAA+ RK +R+ KK G S VE + F A + H S +I+E L L M K
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 494
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 9/302 (2%)
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+L + R++ KG +HG+ VK GL L V N L++FY+K Q SR+ F + PQ+
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
+W+S+IS + N ++ M + PD+ L + + A + G +
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGN--LRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
HC +KTG D +GS L+ +YA CG I AR +FD + R + W+ ++ Y G
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
+EAL +F++ + L + F ++S C+++ +L G + S + +
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIH----KNIELAEFTAEKLFVLD 418
V L + G + A + +P++ ++ A+L A H K IEL F KL +
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIEL--FKRMKLSGMK 315
Query: 419 PN 420
PN
Sbjct: 316 PN 317
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 273/510 (53%), Gaps = 19/510 (3%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDS-----IKKAHAQVVVGGHEQDPFIVAKLVDKYT 60
R ++ +L D + + LL K +D+ +KK H G + D ++ + LV Y+
Sbjct: 150 REMRANGILPDKYTFPSLL---KGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYS 206
Query: 61 LHSDSGLEYARKVFDKLSARD-VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYT 119
+E A+KVFD+L RD WN ++ GY+ + F +AL V+ +MR G +R+T
Sbjct: 207 KFM--SVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHT 264
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
VL A G +IHG AVK G D+ V NAL+ Y K + +E + +F M
Sbjct: 265 ITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMD 324
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
+RD+ +WNS++ + G D + LF M PD TL TVLP + A + G
Sbjct: 325 ERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI--RPDIVTLTTVLPTCGRLASLRQG 382
Query: 240 YWIHCYIVKTGM----KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
IH Y++ +G+ + + + L+ +Y CG + AR +FD + + WN +I
Sbjct: 383 REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMING 442
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAK 354
YG+ + AL MF + AG++PD + F+ LL ACSH+G L +G + MET Y +
Sbjct: 443 YGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILP 502
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKL 414
+ HYAC++D+LGRA L++A E S PI V+ ++L +CR+H N +LA ++L
Sbjct: 503 TSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRL 562
Query: 415 FVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGAN 474
L+P + G YV+++ +Y +AG++++ VR A+R+ ++KK G S + L++G F
Sbjct: 563 HELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTG 622
Query: 475 DESHPYSAQIFETLQ-SLDRIMGKEAQTLN 503
+++HP I + L + + G E T++
Sbjct: 623 NQTHPEFKSIHDWLSLVISHMHGHEYMTVD 652
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 172/313 (54%), Gaps = 8/313 (2%)
Query: 78 SARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGH 137
S RDVF +N +I G+ G +A+ Y EMR G P++YT+P +LK A S
Sbjct: 122 SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-K 180
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-DIVSWNSMISGYTTN 196
+HG A K G D D +VG+ LV+ Y+K VE ++KVF+E+P R D V WN++++GY+
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
+DA+L+F M R + +G + T+ +VL AF DI G IH VKTG D
Sbjct: 241 FRFEDALLVFSKM-REEGVGVSRH-TITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+ + LI +Y ++ A +IF+ + +R +F WN+++ + G L++F++++ +G
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV----AKSEAHYACIVDLLGRAGDL 372
+RPD V +L C L QG ++ M G+ + +E + ++D+ + GDL
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418
Query: 373 KKAVEFIQSMPIQ 385
+ A SM ++
Sbjct: 419 RDARMVFDSMRVK 431
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 12/277 (4%)
Query: 114 TPNRYTYPFV------LKACGAERASQKGHAIHGHAVKCG-LDLDLFVGNALVSFYAKCQ 166
P RY + V L+ C + G IHG V+ G LD G +LV+ YAKC
Sbjct: 51 NPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCG 110
Query: 167 EVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTV 226
+ + VF +RD+ +N++ISG+ NG DA+ + +M R + I PD T ++
Sbjct: 111 LMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREM-RANGI-LPDKYTFPSL 167
Query: 227 LPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTI 286
L + ++ +H K G D +GSGL++ Y+ + A+ +FD + DR
Sbjct: 168 LKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDD 226
Query: 287 FV-WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
V WNA++ Y ++AL +F ++ + G+ +LSA + +G + G +
Sbjct: 227 SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHG 286
Query: 346 TMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G ++D+ G++ L++A ++M
Sbjct: 287 LAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 278/535 (51%), Gaps = 43/535 (8%)
Query: 9 QQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGG-HEQDPFIVAKLVDKYTLHSDSGL 67
++S R +F Y L+ +K+ H ++V G ++ LV Y + G+
Sbjct: 127 HRVSPDRQTFLY--LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGV 184
Query: 68 EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC 127
A KVF ++ DV +NV+I GYA G EAL +Y +M G P+ YT +L C
Sbjct: 185 --AEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCC 242
Query: 128 GAERASQKGHAIHGHAVKCG--LDLDLFVGNALVSFYAKCQE------------------ 167
G + G +HG + G +L + NAL+ Y KC+E
Sbjct: 243 GHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRS 302
Query: 168 -------------VEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVL-LFYDMFRHD 213
+EA++ VF++MP+RD+VSWNS++ GY+ G V LFY+M +
Sbjct: 303 WNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVE 362
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
+ PD T+V+++ A ++ G W+H +++ +K D L S LI +Y CG I
Sbjct: 363 KV-KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIER 421
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
A +F +++ + +W ++I HG+ Q+AL +F ++ + G+ P+ V L +L+ACSH
Sbjct: 422 AFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSH 481
Query: 334 AGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQ-SMPIQPGKNVY 391
+G++ +G +F M + +G HY +VDLL RAG +++A + +Q MP++P ++++
Sbjct: 482 SGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMW 541
Query: 392 GALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREN 451
G++L ACR ++IE AE +L L+P G YV+L+ +Y G+W + + R+A+
Sbjct: 542 GSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENR 601
Query: 452 DIKKPIGYSS-VELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEAQTLNFL 505
+KK GYSS V +E HR A ++HP +I LQ L M + L+ L
Sbjct: 602 GVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMKPKLDCLDLL 656
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 160/355 (45%), Gaps = 44/355 (12%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSAR-D 81
LL C + + K+ AQ++ D F +++L+ + L+ A+ +F + +
Sbjct: 40 LLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPN 99
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
VF +N +I ++ E +Y M +P+R T+ +++KA ++ IH
Sbjct: 100 VFVYNTMISAVSSSK--NECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---IHC 154
Query: 142 HAVKCG-LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVD 200
H + G L L ++ N+LV FY + + KVF MP D+ S+N MI GY G+
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN--LG 258
+A+ L++ M D PD T++++L +DI G +H +I + G N L
Sbjct: 215 EALKLYFKMV--SDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILS 272
Query: 259 SGLISLYANC--------------------------GYISM-----ARAIFDRISDRTIF 287
+ L+ +Y C G++ + A+A+FD++ R +
Sbjct: 273 NALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLV 332
Query: 288 VWNAIIRCYGMHGHAQEALS--MFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
WN+++ Y G Q + ++ + ++PD V + L+S ++ G L+ G
Sbjct: 333 SWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 274/509 (53%), Gaps = 23/509 (4%)
Query: 4 VSRRLQQISVLRDSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYT 60
+ R + + V D +T ++ C +K A H + G+E + L+ +Y
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY- 321
Query: 61 LHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYT 119
S G LE + VF ++S R+V W +I + +A++++ MR G PN T
Sbjct: 322 --SKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVT 374
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
+ ++ A ++G IHG +K G + VGN+ ++ YAK + +E ++K F ++
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPA--FAQKADIH 237
R+I+SWN+MISG+ NG+ +A+ +F P+ T +VL A FA+ +
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSAAAET---MPNEYTFGSVLNAIAFAEDISVK 491
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
G H +++K G+ P + S L+ +YA G I + +F+ +S + FVW +II Y
Sbjct: 492 QGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYS 551
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSE 356
HG + +++F +++ + PD V FL +L+AC+ GM+ +G+++F M E Y + S
Sbjct: 552 SHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSH 611
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFV 416
HY+C+VD+LGRAG LK+A E + +P PG+++ ++LG+CR+H N+++ AE
Sbjct: 612 EHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAME 671
Query: 417 LDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGH-----RKF 471
+ P +G YV + +Y + +W AA +RKA+R+ ++ K G+S +++ + F
Sbjct: 672 MKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGF 731
Query: 472 GANDESHPYSAQIFETLQSLDRIMGKEAQ 500
+ D+SHP S +I+ ++ + M E +
Sbjct: 732 SSGDKSHPKSDEIYRMVEIIGLEMNLEGK 760
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 137/272 (50%), Gaps = 11/272 (4%)
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
+F+ L DV WN ++ G+ + ALN M+ AG + +TY L C
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
G + VK GL+ DL VGN+ ++ Y++ +R+VF+EM +D++SWNS++SG
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 193 YTTNGYVD-DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
+ G +AV++F DM R D+ + +V+ + D+ IH +K G
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGV--ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
+ +G+ L+S Y+ CG + +++F ++S+R + W +I + +A+S+F
Sbjct: 308 ESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLN 362
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
+ G+ P+ V F+ L++A + +G +
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQIKEGLKI 394
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 121/270 (44%), Gaps = 14/270 (5%)
Query: 70 ARKVFDKLSARD-VFCWNVVIKGYANVGPFAEALNVYDE---MRCAGTTPNRYTYPFVLK 125
A K+FD S R+ N I A AL+++ E + G + T LK
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
AC + ++G IHG + G + V NA++ Y K + + +F + D+VS
Sbjct: 87 ACRGDL--KRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHC 244
WN+++SG+ DD + + R G D T T L G +
Sbjct: 145 WNTILSGF------DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 245 YIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG-HAQ 303
+VKTG++ D +G+ I++Y+ G AR +FD +S + + WN+++ G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
EA+ +F+ ++ G+ D V F +++ C H
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCH 288
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 258/452 (57%), Gaps = 4/452 (0%)
Query: 42 VGGHEQDPFIVAKLVDKYTLH-SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAE 100
+ H +D VAKL++ T ++S + YAR +F+ +S D+ +N + +GY+ E
Sbjct: 53 IKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLE 112
Query: 101 ALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVS 160
+++ E+ G P+ YT+P +LKAC +A ++G +H ++K GLD +++V L++
Sbjct: 113 VFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLIN 172
Query: 161 FYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
Y +C++V+++R VF+ + + +V +N+MI+GY ++A+ LF +M P+
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREM--QGKYLKPNE 230
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR 280
TL++VL + A + G WIH Y K + + LI ++A CG + A +IF++
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 281 ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
+ + W+A+I Y HG A++++ MF+++ ++PD + FL LL+ACSH G + +G
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 341 WDLF-QTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACR 399
F Q + +G+ S HY +VDLL RAG+L+ A EFI +PI P ++ LL AC
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACS 410
Query: 400 IHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGY 459
H N++LAE +E++F LD ++ G YVIL+ +Y +W+ +RK +++ K G
Sbjct: 411 SHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGC 470
Query: 460 SSVELESGHRKFGANDESHPYSAQIFETLQSL 491
SS+E+ + +F + D + ++ L +
Sbjct: 471 SSIEVNNVVHEFFSGDGVKSATTKLHRALDEM 502
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 256/469 (54%), Gaps = 5/469 (1%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKL-SARD 81
+L C + ++K H+ V++ G + P I L+ + L +A+ +FD S
Sbjct: 11 MLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPS 70
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT-PNRYTYPFVLKACGAERASQKGHAIH 140
WN +I+G++N ++ Y+ M + + P+ +T+ F LK+C ++ K IH
Sbjct: 71 TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVD 200
G ++ G D V +LV Y+ VE + KVF+EMP RD+VSWN MI ++ G +
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSG 260
A+ ++ M G D+ TLV +L + A + ++ G +H + + +
Sbjct: 191 QALSMYKRMGNEGVCG--DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
LI +YA CG + A +F+ + R + WN++I YG+HGH EA+S F+++V +G+RP+
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFI 379
+ FL LL CSH G++ +G + F+ M + + + + HY C+VDL GRAG L+ ++E I
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMI 368
Query: 380 QSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQ 439
+ ++ LLG+C+IH+N+EL E +KL L+ NAG YV++ +Y A Q
Sbjct: 369 YASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQ 428
Query: 440 DAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETL 488
A +RK IR +D++ G+S +E+ KF +D+ HP SA I+ L
Sbjct: 429 AFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 274/532 (51%), Gaps = 43/532 (8%)
Query: 11 ISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKL----VDKYTLHSDSG 66
++ LR LL C + +K H ++ D F+ ++L VD T + +
Sbjct: 6 LNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTN 65
Query: 67 L-EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
L YA +F ++ ++F +N++I+ ++ ++A Y +M + P+ T+PF++K
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYA---------------------- 163
A G H V+ G D++V N+LV YA
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 164 ---------KCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD 214
KC VE +R++F+EMP R++ +W+ MI+GY N + A+ LF M R
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
+ + +V+V+ + A + G + Y+VK+ M ++ LG+ L+ ++ CG I A
Sbjct: 246 VA--NETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+F+ + + W++II+ +HGHA +A+ F Q++ G P V F +LSACSH
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 335 GMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGA 393
G++ +G ++++ M+ +G+ HY CIVD+LGRAG L +A FI M ++P + GA
Sbjct: 364 GLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGA 423
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
LLGAC+I+KN E+AE L + P ++G YV+L+ +Y AGQW +R ++E +
Sbjct: 424 LLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLV 483
Query: 454 KKPIGYSSVELESGHRKFG-ANDESHPYSAQI---FETLQSLDRIMGKEAQT 501
KKP G+S +E++ KF +D+ HP +I +E + R++G + T
Sbjct: 484 KKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNT 535
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 160/516 (31%), Positives = 259/516 (50%), Gaps = 40/516 (7%)
Query: 20 YTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
Y +L+ +C T ++ KK H + G I +L+ Y L ARKVFD+
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYA--KCGSLVDARKVFDE 145
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEM---------------------------- 108
+ RD+ WNV++ GYA VG EA ++DEM
Sbjct: 146 MPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLY 205
Query: 109 ----RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAK 164
R + PN +T + A A + ++G IHGH V+ GLD D + ++L+ Y K
Sbjct: 206 SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGK 265
Query: 165 CQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLV 224
C ++ +R +F+++ ++D+VSW SMI Y + + LF ++ P+ T
Sbjct: 266 CGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELV--GSCERPNEYTFA 323
Query: 225 TVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR 284
VL A A G +H Y+ + G S L+ +Y CG I A+ + D
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP 383
Query: 285 TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
+ W ++I +G EAL F L+ +G +PD V F+ +LSAC+HAG++ +G + F
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Query: 345 QTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKN 403
++ E + ++ + HY C+VDLL R+G ++ I MP++P K ++ ++LG C + N
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Query: 404 IELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVE 463
I+LAE A++LF ++P N YV +A +Y AG+W++ ++RK ++E + K G S E
Sbjct: 504 IDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTE 563
Query: 464 LESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEA 499
++ F A D SHP QI E L+ L + M +E
Sbjct: 564 IKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 153/351 (43%), Gaps = 40/351 (11%)
Query: 87 VVIKGYANVGPFAEALNVY---------DEMRCAGTTPNRYTYPFVLKACGAERASQKGH 137
VV++ F EA++V ++ P TY +++ C RA ++G
Sbjct: 46 VVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGK 105
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
+H H G + + N L+ YAKC + +RKVF+EMP RD+ SWN M++GY G
Sbjct: 106 KVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165
Query: 198 YVDDAVLLFYDMFRHDDIG---------APDNATLVTVLPAFAQKAD------------- 235
+++A LF +M D D VL + Q+
Sbjct: 166 LLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 236 --------IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF 287
I G IH +IV+ G+ D L S L+ +Y CG I AR IFD+I ++ +
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 288 VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM 347
W ++I Y +E S+F +LV + RP+ F +L+AC+ G + M
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 348 ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGAC 398
G + +VD+ + G+++ A + P +P + +L+G C
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/454 (31%), Positives = 253/454 (55%), Gaps = 21/454 (4%)
Query: 22 DLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARD 81
+L+ CK+ ++K+ HAQ++ G + ++KL+ L S L YA + ++
Sbjct: 14 NLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLH---LSSTVCLSYALSILRQIPNPS 70
Query: 82 VFCWNVVIKGYA---NVGPFAEALNVYDEM---RCAGTTPNRYTYPFVLKACGAE-RASQ 134
VF +N +I N A ++YD++ R PN +TYP + KA G + + +
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 135 KGHAIHGHAVKC--GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
G A+H H +K ++ D FV ALV FYA C ++ +R +F + + D+ +WN++++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 193 YTTNGYVD---DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
Y + +D + +LLF M P+ +LV ++ + A + G W H Y++K
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVR-----PNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
+ L+ +G+ LI LY+ CG +S AR +FD +S R + +NA+IR +HG QE + ++
Sbjct: 246 NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGR 368
+ L+ GL PD F+ +SACSH+G++ +G +F +M+ YG+ HY C+VDLLGR
Sbjct: 306 KSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 369 AGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVIL 428
+G L++A E I+ MP++P ++ + LG+ + H + E E + L L+ N+G YV+L
Sbjct: 366 SGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLL 425
Query: 429 AQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
+ +Y +W D + R+ ++++ + K G S++
Sbjct: 426 SNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 267/500 (53%), Gaps = 37/500 (7%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWN 86
C T +K+ HA ++ G D + A V + S S + YA VF +++ ++ F WN
Sbjct: 35 CSTMRELKQIHASLIKTGLISDT-VTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 87 VVIKGYANVGPFAEALNVYDEMRCAGTT--PNRYTYPFVLKACGAERASQKGHAIHGHAV 144
+I+G++ A++++ +M C+ + P R TYP V KA G ++ G +HG +
Sbjct: 94 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 145 KCGLDLDLFVGNALVSFY-------------------------------AKCQEVEASRK 173
K GL+ D F+ N ++ Y AKC ++ ++
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 213
Query: 174 VFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQK 233
+F+EMPQR+ VSWNSMISG+ NG DA+ +F +M D PD T+V++L A A
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV--KPDGFTMVSLLNACAYL 271
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
G WIH YIV+ +L+ + + LI +Y CG I +F+ + + WN++I
Sbjct: 272 GASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMI 331
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGV 352
+G + A+ +F +L +GL PD V F+ +L+AC+H+G + + + F+ M E Y +
Sbjct: 332 LGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMI 391
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAE 412
S HY +V++LG AG L++A I++MP++ ++ +LL ACR N+E+A+ A+
Sbjct: 392 EPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAK 451
Query: 413 KLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFG 472
L LDP+ YV+L+ Y G +++A R ++E ++K +G SS+E++ +F
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFI 511
Query: 473 ANDESHPYSAQIFETLQSLD 492
+ +HP SA+I+ L L+
Sbjct: 512 SCGGTHPKSAEIYSLLDILN 531
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 167/574 (29%), Positives = 274/574 (47%), Gaps = 74/574 (12%)
Query: 3 GVSRRLQQISVLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKY 59
GV R+ ++ DS +L +C + K + H V G + D F+ + Y
Sbjct: 102 GVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMY 161
Query: 60 TLHSDSGLEYARKVFDKLSARDV------FC----------------------------- 84
G ARKVFD++S +DV C
Sbjct: 162 MRCGRMG--DARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
WN ++ G+ G EA+ ++ ++ G P++ T VL + G G IHG+ +
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVL 204
K GL D V +A++ Y K V +FN+ + N+ I+G + NG VD A+
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 205 LF-------------------------------YDMFRHDDIGA--PDNATLVTVLPAFA 231
+F ++FR + P++ T+ ++LPA
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACG 399
Query: 232 QKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNA 291
A + G H + V+ + + ++GS LI +YA CG I++++ +F+ + + + WN+
Sbjct: 400 NIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS 459
Query: 292 IIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETY 350
++ + MHG A+E +S+F+ L+ L+PD + F LLSAC G+ +GW F+ M E Y
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEY 519
Query: 351 GVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFT 410
G+ HY+C+V+LLGRAG L++A + I+ MP +P V+GALL +CR+ N++LAE
Sbjct: 520 GIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIA 579
Query: 411 AEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRK 470
AEKLF L+P N G YV+L+ +Y G W + +R + +KK G S +++++
Sbjct: 580 AEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYT 639
Query: 471 FGANDESHPYSAQIFETLQSLDRIMGKEAQTLNF 504
A D+SHP QI E + + + M K N
Sbjct: 640 LLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNL 673
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 172/380 (45%), Gaps = 46/380 (12%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNV 87
KTT +AHA+++ G + D +I AKL+ Y+ ++ A V + ++ ++
Sbjct: 33 KTT----QAHARILKSGAQNDGYISAKLIASYSNYN--CFNDADLVLQSIPDPTIYSFSS 86
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+I F +++ V+ M G P+ + P + K C A + G IH + G
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD------------------------- 182
LD+D FV ++ Y +C + +RKVF+ M +D
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 183 ----------IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQ 232
IVSWN ++SG+ +GY +AV++F + H PD T+ +VLP+
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI--HHLGFCPDQVTVSSVLPSVGD 264
Query: 233 KADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAI 292
++ G IH Y++K G+ D + S +I +Y G++ ++F++ V NA
Sbjct: 265 SEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAY 324
Query: 293 IRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
I +G +AL MF+ + + + V + +++ C+ G + +LF+ M+ GV
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 353 AKSEAHYACIVDLLGRAGDL 372
+ ++ I +L G++
Sbjct: 385 ---KPNHVTIPSMLPACGNI 401
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/402 (38%), Positives = 237/402 (58%), Gaps = 14/402 (3%)
Query: 51 IVAKLVDKYTLHSDSGLEYARKVFDKLSARDV--FCWNVVIKGYANVGPFAEALNVYDEM 108
I +KLV Y S E A +VFD++S RD F WN +I GYA +G + +A+ +Y +M
Sbjct: 129 ISSKLVRLYA--SCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQM 186
Query: 109 RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEV 168
G P+R+T+P VLKACG + Q G AIH VK G D++V NALV YAKC ++
Sbjct: 187 AEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDI 246
Query: 169 EASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLP 228
+R VF+ +P +D VSWNSM++GY +G + +A+ +F M ++ PD + +VL
Sbjct: 247 VKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGI--EPDKVAISSVL- 303
Query: 229 AFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV 288
A+ G +H ++++ GM+ + ++ + LI LY+ G + A IFD++ +R
Sbjct: 304 --ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVS 361
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM- 347
WNAII H L F+Q+ A +PDG+ F+ +LS C++ GM+ G LF M
Sbjct: 362 WNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMS 418
Query: 348 ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFI-QSMPIQPGKNVYGALLGACRIHKNIEL 406
+ YG+ HYAC+V+L GRAG +++A I Q M ++ G V+GALL AC +H N ++
Sbjct: 419 KEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDI 478
Query: 407 AEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAI 448
E A++LF L+P+N + +L ++Y A + +D RVR+ +
Sbjct: 479 GEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMM 520
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 115/231 (49%), Gaps = 8/231 (3%)
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+L+ C + RA G +H L +L + + LV YA C E + +VF+ M +RD
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 183 --IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
+WNS+ISGY G +DA+ L++ M +D PD T VL A + G
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMA--EDGVKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG 300
IH +VK G D + + L+ +YA CG I AR +FD I + WN+++ Y HG
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 301 HAQEALSMFQQLVDAGLRPDGVVFLCLLS---ACSHAGMLAQGWDLFQTME 348
EAL +F+ +V G+ PD V +L+ + H L GW + + ME
Sbjct: 276 LLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQL-HGWVIRRGME 325
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 236 IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR--TIFVWNAII 293
I G +H I ++ + + S L+ LYA+CGY +A +FDR+S R + F WN++I
Sbjct: 108 IDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLI 167
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA 353
Y G ++A++++ Q+ + G++PD F +L AC G + G + + + G
Sbjct: 168 SGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFG 227
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
+V + + GD+ KA +P
Sbjct: 228 YDVYVLNALVVMYAKCGDIVKARNVFDMIP 257
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 267/534 (50%), Gaps = 44/534 (8%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
+R+ + D+F Y +L C T + + H + V ++ ++ L+ Y
Sbjct: 133 KRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRF 192
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
+ G+ AR++FD++ RD WN VI YA+ G ++EA ++D+M +G + T+
Sbjct: 193 RNMGI--ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNI 250
Query: 123 V-----------------------------------LKACGAERASQKGHAIHGHAVKCG 147
+ LKAC A + G IHG A+
Sbjct: 251 ISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSS 310
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
D V N L++ Y+KC+++ + VF + + + +WNS+ISGY ++A L
Sbjct: 311 YDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLR 370
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD-PNLGSGLISLYA 266
+M P++ TL ++LP A+ A++ G HCYI++ D L + L+ +YA
Sbjct: 371 EMLVAG--FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYA 428
Query: 267 NCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
G I A+ + D +S R + ++I YG G AL++F+++ +G++PD V +
Sbjct: 429 KSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVA 488
Query: 327 LLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+LSACSH+ ++ +G LF M+ YG+ H++C+VDL GRAG L KA + I +MP +
Sbjct: 489 VLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK 548
Query: 386 PGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVR 445
P + LL AC IH N ++ ++ AEKL + P N G YV++A MY AG W A VR
Sbjct: 549 PSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVR 608
Query: 446 KAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEA 499
+R+ +KK G + ++ +SG F D S P + + L L+++M A
Sbjct: 609 TIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNA 662
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 160/376 (42%), Gaps = 47/376 (12%)
Query: 7 RLQQISVLRDSFYY---TDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYT 60
RLQ S + D LL C + + HA + G E +V KLV Y+
Sbjct: 30 RLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYS 89
Query: 61 ---LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNR 117
LH++ A+ + + WNV+I YA F E + Y M G P+
Sbjct: 90 AFNLHNE-----AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDA 144
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE 177
+TYP VLKACG G +HG L+V NAL+S Y + + + +R++F+
Sbjct: 145 FTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDR 204
Query: 178 MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF--------------------RHDDIGA 217
M +RD VSWN++I+ Y + G +A LF M+ + +GA
Sbjct: 205 MFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGA 264
Query: 218 -------------PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISL 264
D ++ L A + I G IH + + N+ + LI++
Sbjct: 265 LGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITM 324
Query: 265 YANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVF 324
Y+ C + A +F + + ++ WN+II Y ++EA + ++++ AG +P+ +
Sbjct: 325 YSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITL 384
Query: 325 LCLLSACSHAGMLAQG 340
+L C+ L G
Sbjct: 385 ASILPLCARIANLQHG 400
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 100/234 (42%), Gaps = 14/234 (5%)
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYA------KCQEVEASRKVFN 176
+L AC RA G +H H + G++ + LV+FY+ + Q + + + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 177 EMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI 236
+P WN +I+ Y N ++ + + M PD T +VL A + D+
Sbjct: 109 PLP------WNVLIASYAKNELFEEVIAAYKRMVSKGI--RPDAFTYPSVLKACGETLDV 160
Query: 237 HAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCY 296
G +H I + K + + LIS+Y + +AR +FDR+ +R WNA+I CY
Sbjct: 161 AFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCY 220
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETY 350
G EA +F ++ +G+ + + + C G L M +
Sbjct: 221 ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNF 274
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 266/508 (52%), Gaps = 39/508 (7%)
Query: 31 DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIK 90
+ IK+ HA + G ++ ++ +L+ L YARK+FD F +N +I+
Sbjct: 2 NGIKQLHAHCLRTGVDETKDLLQRLL------LIPNLVYARKLFDHHQNSCTFLYNKLIQ 55
Query: 91 GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL 150
Y E++ +Y+ + G P+ +T+ F+ A + +++ +H + G +
Sbjct: 56 AYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFES 115
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
D F L++ YAK + +R+VF+EM +RD+ WN+MI+GY G + A+ LF M
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMP 175
Query: 211 RH------------------------------DDIGAPDNATLVTVLPAFAQKADIHAGY 240
R D P++ T+V+VLPA A ++ G
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD-RTIFVWNAIIRCYGMH 299
+ Y + G + + + I +Y+ CG I +A+ +F+ + + R + WN++I H
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAH 358
G EAL++F Q++ G +PD V F+ LL AC H GM+ +G +LF++ME + ++ H
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 359 YACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD 418
Y C++DLLGR G L++A + I++MP++P V+G LLGAC H N+E+AE +E LF L+
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
Query: 419 PNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSS-VELESGHRKFGANDES 477
P N G VI++ +Y +W R+RK +++ + K GYS VE+ KF D+S
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKS 475
Query: 478 HPYSAQIFETLQSLDRIMGKEAQTLNFL 505
HP S +I++ L+ + R M E + L
Sbjct: 476 HPRSYEIYQVLEEIFRRMKLEKSRFDSL 503
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 241/454 (53%), Gaps = 12/454 (2%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D F + + C I K+ H V G D ++ LV Y + +S A K
Sbjct: 105 DMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGES--RNACK 162
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
VF ++ RDV W +I G+ G + EAL+ + +M PN TY VL + G
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGC 219
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
G IHG +K + L GNAL+ Y KC+++ + +VF E+ ++D VSWNSMISG
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
+A+ LF M I PD L +VL A A + G W+H YI+ G+K
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGI-KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIK 338
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
D ++G+ ++ +YA CGYI A IF+ I + +F WNA++ +HGH E+L F+++
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET--YGVAKSEAHYACIVDLLGRAG 370
V G +P+ V FL L+AC H G++ +G F M++ Y + HY C++DLL RAG
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 371 DLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNI-ELAEFTAEKLFVLDPNNAGRYVILA 429
L +A+E +++MP++P + GA+L AC+ + EL + + ++ ++G YV+L+
Sbjct: 459 LLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLS 518
Query: 430 QMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVE 463
++ +W D AR+R+ ++ I K G S +E
Sbjct: 519 NIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 182/384 (47%), Gaps = 13/384 (3%)
Query: 22 DLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKL-SAR 80
+L+ C + K+ Q++ +D I+ K+V +D Y+ + + S
Sbjct: 11 ELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFA-SYSSVILHSIRSVL 69
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
F +N ++ YA + Y G +P+ +T+P V KACG ++G IH
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVD 200
G K G D++V N+LV FY C E + KVF EMP RD+VSW +I+G+T G
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSG 260
+A+ D F D+ P+ AT V VL + + + G IH I+K + G+
Sbjct: 190 EAL----DTFSKMDV-EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA 244
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL-VDAGLRP 319
LI +Y C +S A +F + + WN++I ++EA+ +F + +G++P
Sbjct: 245 LIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 320 DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFI 379
DG + +LSAC+ G + G + + + T G+ IVD+ + G ++ A+E
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 380 QSMPIQPGKNVY--GALLGACRIH 401
+ KNV+ ALLG IH
Sbjct: 365 NGI---RSKNVFTWNALLGGLAIH 385
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/465 (33%), Positives = 254/465 (54%), Gaps = 10/465 (2%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLE-YARKVFDKLSARDVFCWNVVIKGYANV 95
HA V+ G + + + L+D Y S L Y + F ++ +D+ W VI GYA
Sbjct: 409 HAYVIKHGWDSNLQVGNTLIDMY---SKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQN 465
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
EAL ++ ++ + +L+A ++ IH H ++ GL LD +
Sbjct: 466 DCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQ 524
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N LV Y KC+ + + +VF + +D+VSW SMIS NG +AV LF M +
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV---ET 581
Query: 216 G-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
G + D+ L+ +L A A + ++ G IHCY+++ G L+ ++ ++ +YA CG + A
Sbjct: 582 GLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+A+FDRI + + + ++I YGMHG + A+ +F ++ + PD + FL LL ACSHA
Sbjct: 642 KAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHA 701
Query: 335 GMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGA 393
G+L +G + ME Y + HY C+VD+LGRA + +A EF++ M +P V+ A
Sbjct: 702 GLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCA 761
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
LL ACR H E+ E A++L L+P N G V+++ ++ + G+W D +VR ++ + +
Sbjct: 762 LLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGM 821
Query: 454 KKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKE 498
+K G S +E++ KF A D+SHP S +I+E L + R + +E
Sbjct: 822 EKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLERE 866
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 156/306 (50%), Gaps = 17/306 (5%)
Query: 50 FIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR 109
F+ KLV Y L+ A KVFD++ R F WN +I Y + G A AL +Y MR
Sbjct: 117 FLAGKLVFMYG--KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR 174
Query: 110 CAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVE 169
G ++P +LKAC R + G +H VK G F+ NALVS YAK ++
Sbjct: 175 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS 234
Query: 170 ASRKVFNEMPQR-DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLP 228
A+R++F+ ++ D V WNS++S Y+T+G + + LF +M H AP++ T+V+ L
Sbjct: 235 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREM--HMTGPAPNSYTIVSALT 292
Query: 229 AFAQKADIHAGYWIHCYIVKTGM-KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF 287
A + G IH ++K+ + + + LI++Y CG + A I ++++ +
Sbjct: 293 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 352
Query: 288 VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS-----------HAGM 336
WN++I+ Y + +EAL F ++ AG + D V +++A HA +
Sbjct: 353 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 412
Query: 337 LAQGWD 342
+ GWD
Sbjct: 413 IKHGWD 418
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 168/343 (48%), Gaps = 6/343 (1%)
Query: 34 KKAHAQVVVGG-HEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
K+ HA V+ H + ++ L+ YT + A ++ +++ DV WN +IKGY
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYT--RCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
+ EAL + +M AG + + ++ A G G +H + +K G D +L
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
VGN L+ Y+KC + F M +D++SW ++I+GY N +A+ LF D+ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
D L ++L A + + IHC+I++ G+ LD + + L+ +Y C +
Sbjct: 482 R--MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMG 538
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
A +F+ I + + W ++I ++G+ EA+ +F+++V+ GL D V LC+LSA +
Sbjct: 539 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 333 HAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
L +G ++ + G + +VD+ GDL+ A
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSA 641
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 9/268 (3%)
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDL-FVGNALVSFYAKCQEVEASRKVFNEM 178
+ +VL+ CG RA +G +H K +L F+ LV Y KC ++ + KVF+EM
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN-ATLVTVLPAFAQKADIH 237
P R +WN+MI Y +NG A+ L+++M G P ++ +L A A+ DI
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE---GVPLGLSSFPALLKACAKLRDIR 199
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR-TIFVWNAIIRCY 296
+G +H +VK G + + L+S+YA +S AR +FD ++ +WN+I+ Y
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSE 356
G + E L +F+++ G P+ + L+AC G ++ ++ SE
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 357 AHYAC--IVDLLGRAGDLKKAVEFIQSM 382
Y C ++ + R G + +A ++ M
Sbjct: 320 L-YVCNALIAMYTRCGKMPQAERILRQM 346
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 256/463 (55%), Gaps = 23/463 (4%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
L+ + K + +AH Q+ E D F ++ Y + E A+ FD++ +D
Sbjct: 99 LIGISKDPSRMMEAH-QLFDEIPEPDTFSYNIMLSCYV--RNVNFEKAQSFFDRMPFKDA 155
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA---CG-AERASQKGHA 138
WN +I GYA G +A ++ M N ++ ++ CG E+AS
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKAS----- 206
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP-QRDIVSWNSMISGYTTNG 197
H K + A+++ Y K ++VE + +F +M +++V+WN+MISGY N
Sbjct: 207 ---HFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENS 263
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL 257
+D + LF M ++ P+++ L + L ++ + + G IH + K+ + D
Sbjct: 264 RPEDGLKLFRAML--EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA 321
Query: 258 GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL 317
+ LIS+Y CG + A +F+ + + + WNA+I Y HG+A +AL +F++++D +
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKI 381
Query: 318 RPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAV 376
RPD + F+ +L AC+HAG++ G F++M Y V HY C+VDLLGRAG L++A+
Sbjct: 382 RPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEAL 441
Query: 377 EFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAG 436
+ I+SMP +P V+G LLGACR+HKN+ELAEF AEKL L+ NA YV LA +Y
Sbjct: 442 KLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKN 501
Query: 437 QWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHP 479
+W+D ARVRK ++E+++ K GYS +E+ + F ++D HP
Sbjct: 502 RWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHP 544
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/482 (29%), Positives = 255/482 (52%), Gaps = 39/482 (8%)
Query: 48 DPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDE 107
DPF+ +D Y S + YAR VFD++S RDV WN +I+ Y G EA +++E
Sbjct: 145 DPFVETGFMDMYA--SCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 108 MRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD---------------- 151
M+ + P+ ++ ACG + AI+ ++ + +D
Sbjct: 203 MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGC 262
Query: 152 ---------------LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
LFV A+VS Y+KC ++ ++ +F++ ++D+V W +MIS Y +
Sbjct: 263 MDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES 322
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
Y +A+ +F +M PD ++ +V+ A A + W+H I G++ + +
Sbjct: 323 DYPQEALRVFEEMCCSGI--KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+ + LI++YA CG + R +F+++ R + W+++I MHG A +ALS+F ++
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKA 375
+ P+ V F+ +L CSH+G++ +G +F +M + Y + HY C+VDL GRA L++A
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500
Query: 376 VEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDA 435
+E I+SMP+ ++G+L+ ACRIH +EL +F A+++ L+P++ G V+++ +Y
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYARE 560
Query: 436 GQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIM 495
+W+D +R+ + E ++ K G S ++ +F D+ H S +I+ LD ++
Sbjct: 561 QRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIY---AKLDEVV 617
Query: 496 GK 497
K
Sbjct: 618 SK 619
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 198/435 (45%), Gaps = 47/435 (10%)
Query: 24 LHLCKTTDSIKKAHAQVV--VGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKL-SAR 80
L CK+ + IK+ HA ++ V H+ + F L + S L YA VF + S
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSF----LFNLSVSSSSINLSYALNVFSSIPSPP 74
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
+ +N ++ + + Y +R G +++++ +LKA A +G +H
Sbjct: 75 ESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVD 200
G A K D FV + YA C + +R VF+EM RD+V+WN+MI Y G VD
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD 194
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSG 260
+A LF +M D PD L ++ A + ++ I+ ++++ +++D +L +
Sbjct: 195 EAFKLFEEM--KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 261 LISLYANCGYISMARAIFDRISDRTIFV-------------------------------W 289
L+++YA G + MAR F ++S R +FV W
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 290 NAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET 349
+I Y + QEAL +F+++ +G++PD V ++SAC++ G+L + + +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 350 YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNV--YGALLGACRIHKNIE-- 405
G+ + ++++ + G L + + M P +NV + +++ A +H
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKM---PRRNVVSWSSMINALSMHGEASDA 429
Query: 406 LAEFTAEKLFVLDPN 420
L+ F K ++PN
Sbjct: 430 LSLFARMKQENVEPN 444
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/463 (32%), Positives = 247/463 (53%), Gaps = 5/463 (1%)
Query: 31 DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIK 90
D K H Q++ + DP + L+ YT D + A KVF+++ DV W+ +I
Sbjct: 264 DFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD--MSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 91 GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL 150
+ G EA++++ MR A PN +T +L C + S G +HG VK G DL
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
D++V NAL+ YAKC++++ + K+F E+ ++ VSWN++I GY G A +F +
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 211 RHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGY 270
R+ + T + L A A A + G +H +KT + + LI +YA CG
Sbjct: 442 RNQ--VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 271 ISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSA 330
I A+++F+ + + WNA+I Y HG ++AL + + D +P+G+ FL +LS
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 331 CSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKN 389
CS+AG++ QG + F++M +G+ HY C+V LLGR+G L KA++ I+ +P +P
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 390 VYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIR 449
++ A+L A N E A +AE++ ++P + YV+++ MY A QW + A +RK+++
Sbjct: 620 IWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMK 679
Query: 450 ENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLD 492
E +KK G S +E + F HP I L+ L+
Sbjct: 680 EMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLN 722
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 178/383 (46%), Gaps = 7/383 (1%)
Query: 3 GVSRRLQQISVLRDSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKY 59
G+ RL + + +T L L + D + H+ +V G++ + F+ A L++ Y
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 60 TLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYT 119
++ ++ AR VF+ + +D+ W ++ Y G F ++L + MR AG PN YT
Sbjct: 192 SVCG--SVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
+ LKA A +HG +K LD VG L+ Y + ++ + KVFNEMP
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
+ D+V W+ MI+ + NG+ ++AV LF M + P+ TL ++L A G
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRM--REAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
+H +VK G LD + + LI +YA C + A +F +S + WN +I Y
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
G +A SMF++ + + V F L AC+ + G + AK A
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 360 ACIVDLLGRAGDLKKAVEFIQSM 382
++D+ + GD+K A M
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEM 510
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 41/293 (13%)
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG---- 128
+ K S D+F N+++ Y G +ALN++DEM P R FV A G
Sbjct: 75 ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM------PERNNVSFVTLAQGYACQ 128
Query: 129 -----AERASQKGHAIHGHA------------------------VKCGLDLDLFVGNALV 159
R ++GH ++ H VK G D + FVG AL+
Sbjct: 129 DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALI 188
Query: 160 SFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPD 219
+ Y+ C V+++R VF + +DIV W ++S Y NGY +D++ L M + P+
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFM--PN 246
Query: 220 NATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFD 279
N T T L A +H I+KT LDP +G GL+ LY G +S A +F+
Sbjct: 247 NYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFN 306
Query: 280 RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
+ + W+ +I + +G EA+ +F ++ +A + P+ +L+ C+
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 116 NRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVF 175
+ + Y +L+ C + AIH +K G LDLF N L++ Y K + + +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 176 NEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKAD 235
+EMP+R+ VS+ ++ GY D + L+ + R P T L KA+
Sbjct: 108 DEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 236 IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
I W+H IVK G + +G+ LI+ Y+ CG + AR +F+ I + I VW I+ C
Sbjct: 164 ICP--WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSC 221
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGM--LAQGWDLFQTMETYGVA 353
Y +G+ +++L + + AG P+ F L A G A+G Q ++T V
Sbjct: 222 YVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH-GQILKTCYVL 280
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
++ L + GD+ A + MP
Sbjct: 281 DPRVGVG-LLQLYTQLGDMSDAFKVFNEMP 309
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/478 (31%), Positives = 245/478 (51%), Gaps = 48/478 (10%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
+ + +L L S K ++V E++ + +++ Y L+ D L AR+ FD
Sbjct: 30 NQMFLFGMLCLMGVIASANKVFCEMV----EKNVVLWTSMINGYLLNKD--LVSARRYFD 83
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK 135
RD+ WN +I GY +G EA +++D+M C
Sbjct: 84 LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR------------------------ 119
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
D+ N ++ YA ++EA +VF++MP+R++ SWN +I GY
Sbjct: 120 ---------------DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQ 164
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM-KLD 254
NG V + + F M + P++AT+ VL A A+ G W+H Y G K+D
Sbjct: 165 NGRVSEVLGSFKRMVDEGSV-VPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
N+ + LI +Y CG I +A +F I R + WN +I HGH EAL++F ++ +
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN 283
Query: 315 AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLK 373
+G+ PD V F+ +L AC H G++ G F +M T + + H C+VDLL RAG L
Sbjct: 284 SGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLT 343
Query: 374 KAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYE 433
+AVEFI MP++ ++ LLGA +++K +++ E E+L L+P N +V+L+ +Y
Sbjct: 344 QAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYG 403
Query: 434 DAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
DAG++ DAAR++ A+R+ KK G S +E + G KF ++ E HP + ++ L+ L
Sbjct: 404 DAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 235/439 (53%), Gaps = 6/439 (1%)
Query: 55 LVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT 114
L++ Y D L ARKVFD++ R + WN +I G E L+++ EM G +
Sbjct: 31 LINGYVRAGD--LVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
P+ YT V R+ G IHG+ +K GL+LDL V ++L Y + +++ V
Sbjct: 89 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148
Query: 175 FNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA 234
MP R++V+WN++I G NG + VL Y M + P+ T VTVL + + A
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLA 206
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
G IH +K G + S LIS+Y+ CG + A F D +W+++I
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 295 CYGMHGHAQEALSMFQQLVD-AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGV 352
YG HG EA+ +F + + + + V FL LL ACSH+G+ +G +LF M E YG
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAE 412
HY C+VDLLGRAG L +A I+SMPI+ ++ LL AC IHKN E+A+ +
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 413 KLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFG 472
++ +DPN++ YV+LA ++ A +W+D + VRK++R+ ++KK G S E + +F
Sbjct: 387 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 446
Query: 473 ANDESHPYSAQIFETLQSL 491
D S S +I+ L+ L
Sbjct: 447 MGDRSQSKSKEIYSYLKEL 465
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 2/222 (0%)
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N L++ Y + ++ +RKVF+EMP R + +WN+MI+G + ++ + LF +M H
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREM--HGLG 86
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
+PD TL +V A + G IH Y +K G++LD + S L +Y G +
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
+ + R + WN +I +G + L +++ + +G RP+ + F+ +LS+CS
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 336 MLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
+ QG + G + A + ++ + + G L A +
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 248
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 254/469 (54%), Gaps = 8/469 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
+ HA V+ G D + L Y L++ S E A K+F ++ +D+ W +I GY
Sbjct: 317 RDIHAYVITTGFAVDISVCNSLTQMY-LNAGSWRE-AEKLFSRMERKDIVSWTTMISGYE 374
Query: 94 -NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
N P +A++ Y M P+ T VL AC G +H A+K L +
Sbjct: 375 YNFLP-DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
V N L++ Y+KC+ ++ + +F+ +P+++++SW S+I+G N +A++ M
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM--- 490
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
P+ TL L A A+ + G IH ++++TG+ LD L + L+ +Y CG ++
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
A + F+ + + WN ++ Y G + +F ++V + +RPD + F+ LL CS
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 333 HAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYG 392
+ M+ QG F ME YGV + HYAC+VDLLGRAG+L++A +FIQ MP+ P V+G
Sbjct: 610 KSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 393 ALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREND 452
ALL ACRIH I+L E +A+ +F LD + G Y++L +Y D G+W++ A+VR+ ++EN
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 453 IKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEAQT 501
+ G S VE++ F ++D+ HP + +I L+ M + T
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLT 778
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 186/352 (52%), Gaps = 9/352 (2%)
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR-CAGTTPNRYTYPFVLKACGAER 131
VF K+S R++F WNV++ GYA G F EA+ +Y M G P+ YT+P VL+ CG
Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 132 ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMIS 191
+G +H H V+ G +LD+ V NAL++ Y KC +V+++R +F+ MP+RDI+SWN+MIS
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
GY NG + + LF+ M R + PD TL +V+ A D G IH Y++ TG
Sbjct: 271 GYFENGMCHEGLELFFAM-RGLSVD-PDLMTLTSVISACELLGDRRLGRDIHAYVITTGF 328
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
+D ++ + L +Y N G A +F R+ + I W +I Y + +A+ ++
Sbjct: 329 AVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRM 388
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGD 371
+ ++PD + +LSAC+ G L G +L + + ++++ +
Sbjct: 389 MDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKC 448
Query: 372 LKKAVEFIQSMPIQPGKNV--YGALLGACRI-HKNIELAEFTAEKLFVLDPN 420
+ KA++ ++ P KNV + +++ R+ ++ E F + L PN
Sbjct: 449 IDKALDIFHNI---PRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPN 497
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 161/342 (47%), Gaps = 5/342 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ H VV G+E D +V L+ Y D ++ AR +FD++ RD+ WN +I GY
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGD--VKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
G E L ++ MR P+ T V+ AC + G IH + + G +D+
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
V N+L Y + K+F+ M ++DIVSW +MISGY N ++ D + Y M D
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYN-FLPDKAIDTYRMMDQD 392
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
+ PD T+ VL A A D+ G +H +K + + + LI++Y+ C I
Sbjct: 393 SV-KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
A IF I + + W +II ++ EAL +Q+ L+P+ + L+AC+
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACAR 510
Query: 334 AGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
G L G ++ + GV + ++D+ R G + A
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 142/294 (48%), Gaps = 1/294 (0%)
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGL 148
+ G G EA+ + + M+ + + +++ C +RA ++G ++ A+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 149 DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYD 208
L + +GNA ++ + + + + VF +M +R++ SWN ++ GY GY D+A+ L++
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 209 MFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC 268
M + PD T VL D+ G +H ++V+ G +LD ++ + LI++Y C
Sbjct: 186 MLWVGGV-KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 269 GYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLL 328
G + AR +FDR+ R I WNA+I Y +G E L +F + + PD + ++
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 329 SACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
SAC G G D+ + T G A + + + AG ++A + M
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 261/454 (57%), Gaps = 5/454 (1%)
Query: 46 EQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNV 104
E DP + + L+++ G L V +S R++ WN +I YA+ G +AL +
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGL 392
Query: 105 YDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAK 164
+ +M P+ +T + AC G IHGH ++ + D FV N+L+ Y+K
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSK 451
Query: 165 CQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLV 224
V+++ VFN++ R +V+WNSM+ G++ NG +A+ LF D H + + T +
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLF-DYMYHSYL-EMNEVTFL 509
Query: 225 TVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR 284
V+ A + + G W+H ++ +G+K D + LI +YA CG ++ A +F +S R
Sbjct: 510 AVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 285 TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
+I W+++I YGMHG A+S F Q+V++G +P+ VVF+ +LSAC H+G + +G F
Sbjct: 569 SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628
Query: 345 QTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNI 404
M+++GV+ + H+AC +DLL R+GDLK+A I+ MP +V+G+L+ CRIH+ +
Sbjct: 629 NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKM 688
Query: 405 ELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVEL 464
++ + L + ++ G Y +L+ +Y + G+W++ R+R A++ +++KK GYS++E+
Sbjct: 689 DIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEI 748
Query: 465 ESGHRKFGANDESHPYSAQIFETLQSLDRIMGKE 498
+ +FGA +E+ + +I+ L +L + +E
Sbjct: 749 DQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 155/309 (50%), Gaps = 9/309 (2%)
Query: 35 KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYAN 94
K H +++ GG + D I L+ Y L A KVFD + RD+ W+ ++
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYG--QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 95 VGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFV 154
G +AL ++ M G P+ T V++ C + ++HG + DLD +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 155 GNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD 214
N+L++ Y+KC ++ +S ++F ++ +++ VSW +MIS Y + + A+ F +M +
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN---LGSGLISLYANCGYI 271
P+ TL +VL + I G +H + V+ +LDPN L L+ LYA CG +
Sbjct: 300 --EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR--ELDPNYESLSLALVELYAECGKL 355
Query: 272 SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
S + +SDR I WN++I Y G +AL +F+Q+V ++PD +SAC
Sbjct: 356 SDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISAC 415
Query: 332 SHAGMLAQG 340
+AG++ G
Sbjct: 416 ENAGLVPLG 424
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 163/323 (50%), Gaps = 6/323 (1%)
Query: 20 YTDLLHLCKTTDSIKKAHAQVVVGGH-EQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLS 78
Y L C + + + HA ++V G +DP V KL++ Y + +R VF+
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSP--DSSRLVFEAFP 61
Query: 79 ARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK-GH 137
D F + V+IK A+++Y + T +++ +P VL+AC R G
Sbjct: 62 YPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGG 121
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
+HG +K G+D D + +L+ Y + + + KVF+ MP RD+V+W++++S NG
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL 257
V A+ +F M DD PD T+++V+ A+ + +H I + LD L
Sbjct: 182 EVVKALRMFKCMV--DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 258 GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL 317
+ L+++Y+ CG + + IF++I+ + W A+I Y +++AL F +++ +G+
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 318 RPDGVVFLCLLSACSHAGMLAQG 340
P+ V +LS+C G++ +G
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREG 322
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 244/460 (53%), Gaps = 7/460 (1%)
Query: 34 KKAHAQVVVGGHE-QDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
+++H V+ G E + F+ + LVD Y + A+ V D++ +DV +I GY
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKT--REAKLVLDRVEEKDVVLITALIVGY 242
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
+ G EA+ + M PN YTY VL +CG + G IHG VK G + L
Sbjct: 243 SQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
+L++ Y +C V+ S +VF + + VSW S+ISG NG + A++ F M R
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR- 361
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
D P++ TL + L + A G IH + K G D GSGLI LY CG
Sbjct: 362 -DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
MAR +FD +S+ + N +I Y +G +EAL +F+++++ GL+P+ V L +L AC+
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 333 HAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYG 392
++ ++ +G +LF + + + HYAC+VDLLGRAG L++A E + + I P ++
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWR 539
Query: 393 ALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREND 452
LL AC++H+ +E+AE K+ ++P + G ++++ +Y G+W ++ +++
Sbjct: 540 TLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMK 599
Query: 453 IKKPIGYSSVELESGHRKFGANDE-SHPYSAQIFETLQSL 491
+KK S VE+ F A D SHP S QI E L+ L
Sbjct: 600 LKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 165/362 (45%), Gaps = 9/362 (2%)
Query: 13 VLRDSFYYTDLLHLC---KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY 69
L + ++ LL C ++ IK A ++ G + +KLVD D ++Y
Sbjct: 61 TLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGD--IDY 117
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
AR+VFD +S R + WN +I EA+ +Y M P+ YT V KA
Sbjct: 118 ARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSD 177
Query: 130 ERASQKGHAIHGHAVKCGLDL-DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
++ HG AV GL++ ++FVG+ALV Y K + ++ V + + ++D+V +
Sbjct: 178 LSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITA 237
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
+I GY+ G +AV F M P+ T +VL + DI G IH +VK
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEK--VQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
+G + + L+++Y C + + +F I W ++I +G + AL
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIE 355
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
F++++ ++P+ L CS+ M +G + + YG + + + ++DL G+
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGK 415
Query: 369 AG 370
G
Sbjct: 416 CG 417
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 155/465 (33%), Positives = 250/465 (53%), Gaps = 41/465 (8%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGY 92
KK HA ++ G + D I KL+ LH G L YAR+VFD+L + +N +I GY
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLL---ILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERAS-----QKGHAIHGHAVKCG 147
G E L + M +G + YT VLKA + ++ +H +KC
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF- 206
++LD + ALV Y K ++E++R VF M ++V SMISGY G+V+DA +F
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 207 ---------------------------YDMFRHDDIGA--PDNATLVTVLPAFAQKADIH 237
DM+ P+ +T +V+ A +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
G +H I+K+G+ +GS L+ +YA CG I+ AR +FD++ ++ +F W ++I YG
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSE 356
+G+ +EAL +F ++ + + P+ V FL LSACSH+G++ +G+++F++M+ Y +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFV 416
HYACIVDL+GRAGDL KA EF ++MP +P +++ ALL +C +H N+ELA A +LF
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Query: 417 LDPNN-AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYS 460
L+ + G Y+ L+ +Y +W + +++R+ ++ I K IG S
Sbjct: 471 LNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 150/358 (41%), Gaps = 60/358 (16%)
Query: 132 ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMIS 191
A + G IH +K G DL + L+ + KC + +R+VF+E+P+ + ++N MIS
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI-----HAGYWIHCYI 246
GY +G V + +LL M + D TL VL A + +H I
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGE--KADGYTLSMVLKASNSRGSTMILPRSLCRLVHARI 166
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+K ++LD L + L+ Y G + AR +F+ + D + ++I Y G ++A
Sbjct: 167 IKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA- 225
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQ-GWDLFQTMETYGVAKSEAHYACIVDL 365
+++ + D VV+ ++ S +G A+ D++ +M+
Sbjct: 226 ---EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQ----------------- 265
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
RAG P + + +++GAC + + E+ + ++ +G Y
Sbjct: 266 --RAG-------------FHPNISTFASVIGACSVLTSHEVGQQVHAQIM-----KSGVY 305
Query: 426 V------ILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDES 477
L MY G DA RV ++E ++ +S + G+ K G +E+
Sbjct: 306 THIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV-----FSWTSMIDGYGKNGNPEEA 358
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 261/477 (54%), Gaps = 11/477 (2%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKY-TLHSDSGLEYARKVFDKLSARDVFCW 85
C + + + H +VV + FI +LV Y L D A K+FD++ RD+ W
Sbjct: 44 CVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDV---CAEKLFDEMPERDLVSW 100
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCA--GTTPNRYTYPFVLKACGAERASQKGHAIHGHA 143
N +I GY+ G + V M + G PN T+ ++ AC + ++G IHG
Sbjct: 101 NSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLV 160
Query: 144 VKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAV 203
+K G+ ++ V NA +++Y K ++ +S K+F ++ +++VSWN+MI + NG +
Sbjct: 161 MKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKG- 219
Query: 204 LLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
L +++M R +G PD AT + VL + + IH I+ G + + + L+
Sbjct: 220 LAYFNMSRR--VGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALL 277
Query: 263 SLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
LY+ G + + +F I+ W A++ Y HG ++A+ F+ +V G+ PD V
Sbjct: 278 DLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHV 337
Query: 323 VFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
F LL+ACSH+G++ +G F+TM + Y + HY+C+VDLLGR+G L+ A I+
Sbjct: 338 TFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKE 397
Query: 382 MPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDA 441
MP++P V+GALLGACR++K+ +L AE+LF L+P + YV+L+ +Y +G W+DA
Sbjct: 398 MPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDA 457
Query: 442 ARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKE 498
+R+R +++ + + G S +E + KF D SHP S +I + L+ + + M E
Sbjct: 458 SRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSE 514
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 220 NATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFD 279
+A + +++ A I +HC +VK+ +G L+ Y G+ A +FD
Sbjct: 31 DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90
Query: 280 RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV--DAGLRPDGVVFLCLLSACSHAGML 337
+ +R + WN++I Y G+ + + +++ + G RP+ V FL ++SAC + G
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 338 AQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+G + + +GV + ++ G+ GDL + + + + I+
Sbjct: 151 EEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 263/493 (53%), Gaps = 16/493 (3%)
Query: 5 SRRLQQISVLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTL 61
S RL + + SF ++ LC ++ + H VV G D I L+ Y+
Sbjct: 285 SMRLNYVRLSESSF--ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS- 341
Query: 62 HSDSGLEYARKVFDKLS-ARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
+ + A ++F ++ +V W +I G+ EA++++ EM+ G PN +TY
Sbjct: 342 -KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
+L A S+ +H VK + VG AL+ Y K +VE + KVF+ +
Sbjct: 401 SVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPA-FAQKADIHAG 239
+DIV+W++M++GY G + A+ +F ++ + P+ T ++L A A + G
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI--KPNEFTFSSILNVCAATNASMGQG 514
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
H + +K+ + + S L+++YA G I A +F R ++ + WN++I Y H
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQH 574
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAH 358
G A +AL +F+++ ++ DGV F+ + +AC+HAG++ +G F M +A ++ H
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634
Query: 359 YACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD 418
+C+VDL RAG L+KA++ I++MP G ++ +L ACR+HK EL AEK+ +
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK 694
Query: 419 PNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESH 478
P ++ YV+L+ MY ++G WQ+ A+VRK + E ++KK GYS +E+++ F A D SH
Sbjct: 695 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754
Query: 479 PYSAQIFETLQSL 491
P QI+ L+ L
Sbjct: 755 PLKDQIYMKLEDL 767
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 5/298 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++ H Q + G D + LVD Y S + RKVFD++ R+V W +I GYA
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYM--KGSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
E L ++ M+ GT PN +T+ L E +G +H VK GLD +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
V N+L++ Y KC V +R +F++ + +V+WNSMISGY NG +A+ +FY M R +
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM-RLN 289
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
+ + ++ +V+ A ++ +HC +VK G D N+ + L+ Y+ C +
Sbjct: 290 YVRLSE-SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 274 ARAIFDRIS-DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSA 330
A +F I + W A+I + + +EA+ +F ++ G+RP+ + +L+A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 2/289 (0%)
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
S S L A +FDK RD + ++ G++ G EA ++ + G + +
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
VLK G +H +K G D+ VG +LV Y K + RKVF+EM +R+
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
+V+W ++ISGY N D+ + LF M ++ P++ T L A++ G +
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRM--QNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
H +VK G+ + + LI+LY CG + AR +FD+ +++ WN++I Y +G
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG 351
EAL MF + +R F ++ C++ L L ++ YG
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 271 bits (692), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 266/502 (52%), Gaps = 14/502 (2%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
+R+ ++ D L C + K+ H V G ++D + L+D Y
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMY--- 574
Query: 63 SDSGL-EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYP 121
S G+ + ARKVF L V N +I GY+ EA+ ++ EM G P+ T+
Sbjct: 575 SKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFA 633
Query: 122 FVLKACGAERASQKGHAIHGHAVKCGLDLD-LFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
+++AC + G HG K G + ++G +L+ Y + + + +F+E+
Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693
Query: 181 -RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
+ IV W M+SG++ NG+ ++A L FY RHD + PD AT VTVL + + + G
Sbjct: 694 PKSIVLWTGMMSGHSQNGFYEEA-LKFYKEMRHDGV-LPDQATFVTVLRVCSVLSSLREG 751
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRT-IFVWNAIIRCYGM 298
IH I LD + LI +YA CG + + +FD + R+ + WN++I Y
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEA 357
+G+A++AL +F + + + PD + FL +L+ACSHAG ++ G +F+ M YG+
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL 417
H AC+VDLLGR G L++A +FI++ ++P ++ +LLGACRIH + E +AEKL L
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIEL 931
Query: 418 DPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDES 477
+P N+ YV+L+ +Y G W+ A +RK +R+ +KK GYS +++E F A D+S
Sbjct: 932 EPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKS 991
Query: 478 HPYSAQIFETLQSLDRIMGKEA 499
H +I L+ L +M +A
Sbjct: 992 HSEIGKIEMFLEDLYDLMKDDA 1013
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 168/340 (49%), Gaps = 4/340 (1%)
Query: 44 GHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALN 103
GH D +++ Y L+ AR +F ++S+ DV WNV+I G+ G A+
Sbjct: 256 GHRPDHLAFVTVINTYIRLGK--LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 104 VYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYA 163
+ MR + R T VL A G G +H A+K GL +++VG++LVS Y+
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373
Query: 164 KCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATL 223
KC+++EA+ KVF + +++ V WN+MI GY NG + LF DM D+ T
Sbjct: 374 KCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM--KSSGYNIDDFTF 431
Query: 224 VTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD 283
++L A D+ G H I+K + + +G+ L+ +YA CG + AR IF+R+ D
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCD 491
Query: 284 RTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
R WN II Y + EA +F+++ G+ DG L AC+H L QG +
Sbjct: 492 RDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Query: 344 FQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
G+ + + ++D+ + G +K A + S+P
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 183/372 (49%), Gaps = 10/372 (2%)
Query: 16 DSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D F +T LL C + ++ + H+ ++ ++ F+ LVD Y LE AR+
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYA--KCGALEDARQ 484
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
+F+++ RD WN +I Y +EA +++ M G + LKAC
Sbjct: 485 IFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHG 544
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
+G +H +VKCGLD DL G++L+ Y+KC ++ +RKVF+ +P+ +VS N++I+G
Sbjct: 545 LYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
Y+ N +++AV+LF +M P T T++ A + + G H I K G
Sbjct: 605 YSQNN-LEEAVVLFQEMLTRG--VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFS 661
Query: 253 LDPN-LGSGLISLYANCGYISMARAIFDRISD-RTIFVWNAIIRCYGMHGHAQEALSMFQ 310
+ LG L+ +Y N ++ A A+F +S ++I +W ++ + +G +EAL ++
Sbjct: 662 SEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYK 721
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAG 370
++ G+ PD F+ +L CS L +G + + E ++D+ + G
Sbjct: 722 EMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCG 781
Query: 371 DLKKAVEFIQSM 382
D+K + + M
Sbjct: 782 DMKGSSQVFDEM 793
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 163/323 (50%), Gaps = 12/323 (3%)
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
G A+H ++ G+D + +GNA+V YAKC +V + K F+ + ++D+ +WNSM+S Y++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
G + F +F + P+ T VL A++ ++ G IHC ++K G++ +
Sbjct: 138 IGKPGKVLRSFVSLFENQIF--PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
G L+ +YA C IS AR +F+ I D W + Y G +EA+ +F+++ D
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
G RPD + F+ +++ G L LF M + V + ++ G+ G A
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVA----WNVMISGHGKRGCETVA 311
Query: 376 VEFIQSM---PIQPGKNVYGALLGACRIHKNIELAEFT-AEKLFVLDPNNAGRYVILAQM 431
+E+ +M ++ ++ G++L A I N++L AE + + +N L M
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 432 YEDAGQWQDAARVRKAIRE-NDI 453
Y + + AA+V +A+ E ND+
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDV 394
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 128/297 (43%), Gaps = 40/297 (13%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K H++ ++ G + + + +VD Y + + YA K FD L +DV WN ++ Y+
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYA--KCAQVSYAEKQFDFLE-KDVTAWNSMLSMYS 136
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
++G + L + + PN++T+ VL C E + G IH +K GL+ + +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
G ALV YAKC + +R+VF + + V W + SGY G ++AVL+F M D
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM--RD 254
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
+ PD+ VTV I+ Y G +
Sbjct: 255 EGHRPDHLAFVTV-----------------------------------INTYIRLGKLKD 279
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSA 330
AR +F +S + WN +I +G G A+ F + + ++ +LSA
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 236 IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
+ G +H + G+ + LG+ ++ LYA C +S A FD + ++ + WN+++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKS 355
Y G + L F L + + P+ F +LS C+ + G + +M G+ ++
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 356 EAHYACIVDLLG---RAGDLKKAVEFI 379
+VD+ R D ++ E+I
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWI 221
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 233/434 (53%), Gaps = 3/434 (0%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
L A K+FD R+ W+ ++ GY+ G EA+ ++ M AG P+ YT VL A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C ++G +H +K G + LF ALV YAK + +RK F+ + +RD+ W
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
S+ISGY N ++A++L+ M I P++ T+ +VL A + A + G +H +
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTAGII--PNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+K G L+ +GS L ++Y+ CG + +F R ++ + WNA+I +G EAL
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDL 365
+F++++ G+ PD V F+ ++SACSH G + +GW F M + G+ HYAC+VDL
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL 569
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
L RAG LK+A EFI+S I G ++ LL AC+ H EL + EKL L + Y
Sbjct: 570 LSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTY 629
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIF 485
V L+ +Y G+ +D RV K +R N + K +G S +EL++ + F D HP +
Sbjct: 630 VQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETK 689
Query: 486 ETLQSLDRIMGKEA 499
+ + + R M +E
Sbjct: 690 DLVCLVSRQMIEEG 703
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEA---LNVYDEMRCAGTTPNRYTYPFV 123
L A +F+ + +DV WN +I GY+ G + + + ++ EMR PN YT +
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
KA + ++S G H VK D++V +LV Y K VE KVF MP+R+
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
+W++M+SGY T G V++A+ +F R + G+ + VL + A + G IH
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
C +K G+ L + L+++Y+ C ++ A +FD DR W+A++ Y +G +
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
EA+ +F ++ AG++P + +L+ACS L +G L + G + +V
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 364 DLLGRAG---DLKKAVEFIQ 380
D+ +AG D +K + +Q
Sbjct: 365 DMYAKAGCLADARKGFDCLQ 384
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 145/288 (50%), Gaps = 8/288 (2%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ H+ ++ G E+ F LVD Y L ARK FD L RDV W +I GY
Sbjct: 342 KQLHSFLLKLGFERHLFATTALVDMYA--KAGCLADARKGFDCLQERDVALWTSLISGYV 399
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
EAL +Y M+ AG PN T VLKAC + + G +HGH +K G L++
Sbjct: 400 QNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVP 459
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
+G+AL + Y+KC +E VF P +D+VSWN+MISG + NG D+A+ LF +M
Sbjct: 460 IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG 519
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLG--SGLISLYANCGYI 271
PD+ T V ++ A + K + G W + ++ + LDP + + ++ L + G +
Sbjct: 520 --MEPDDVTFVNIISACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQL 576
Query: 272 SMARAIFDRIS-DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLR 318
A+ + + D + +W ++ HG + + ++L+ G R
Sbjct: 577 KEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+R G A+HG ++ G + N LV+FYAKC ++ + +FN + +D+VSWNS+
Sbjct: 27 QRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 190 ISGYTTNGYVDDA--VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIV 247
I+GY+ NG + + V+ + R DI P+ TL + A + G H +V
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDI-LPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 248 KTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALS 307
K D + + L+ +Y G + +F + +R + W+ ++ Y G +EA+
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 308 MFQ 310
+F
Sbjct: 206 VFN 208
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 218 PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAI 277
P +TL+ L +Q+ ++ AG +H I++TG + L++ YA CG ++ A +I
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 278 FDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQ 310
F+ I + + WN++I Y +G + ++ Q
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQ 104
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 238/462 (51%), Gaps = 10/462 (2%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ H + V G E D ++ + LVD Y LE AR+VF K+ + + WN +IKGY
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYG--KCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
G + + + M GT P++ T +L AC R G IHG+ ++ ++ D++
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIV-SWNSMISGYTTNGYVDDAVLLFYDMFRH 212
V +L+ Y KC E + VF++ Q+D+ SWN MIS Y + G AV ++ M
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQMV-- 402
Query: 213 DDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
+G PD T +VLPA +Q A + G IH I ++ ++ D L S L+ +Y+ CG
Sbjct: 403 -SVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNE 461
Query: 272 SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
A IF+ I + + W +I YG HG +EAL F ++ GL+PDGV L +LSAC
Sbjct: 462 KEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
Query: 332 SHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP-IQPGKN 389
HAG++ +G F M + YG+ HY+C++D+LGRAG L +A E IQ P
Sbjct: 522 GHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAE 581
Query: 390 VYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIR 449
+ L AC +H L + A L P++A Y++L +Y W A RVR ++
Sbjct: 582 LLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMK 641
Query: 450 ENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
E ++K G S +E+ F A D SH + ++E L L
Sbjct: 642 EMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 173/347 (49%), Gaps = 4/347 (1%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H VV G+ D + + LV Y + E + +VFD++ RDV WN VI + G
Sbjct: 130 HTLVVKSGYVCDVVVASSLVGMYAKFN--LFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
+AL ++ M +G PN + + AC ++G IH VK G +LD +V +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
ALV Y KC +E +R+VF +MP++ +V+WNSMI GY G V + M
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT-- 305
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARA 276
P TL ++L A ++ ++ G +IH Y++++ + D + LI LY CG ++A
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 277 IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGM 336
+F + WN +I Y G+ +A+ ++ Q+V G++PD V F +L ACS
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 337 LAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
L +G + ++ + E + ++D+ + G+ K+A S+P
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 213/473 (45%), Gaps = 61/473 (12%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSAR-DVFCWN 86
K+ IK H +++ G +D + L++ Y D AR VF+ R DV+ WN
Sbjct: 18 KSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHC--SARHVFENFDIRSDVYIWN 75
Query: 87 VVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK 145
++ GY+ F + L V+ + C+ P+ +T+P V+KA GA G IH VK
Sbjct: 76 SLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVK 135
Query: 146 CGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLL 205
G D+ V ++LV YAK E S +VF+EMP+RD+ SWN++IS + +G + A+ L
Sbjct: 136 SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALEL 195
Query: 206 FYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY 265
F M P++ +L + A ++ + G IH VK G +LD + S L+ +Y
Sbjct: 196 FGRM--ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMY 253
Query: 266 ANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
C + +AR +F ++ +++ WN++I+ Y G ++ + + +++ G RP
Sbjct: 254 GKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLT 313
Query: 326 CLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYAC-IVDLLGRAGDLK----------- 373
+L ACS + L G V ++ + C ++DL + G+
Sbjct: 314 SILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQK 372
Query: 374 --------------------KAVEF---IQSMPIQPGKNVYGALLGAC----------RI 400
KAVE + S+ ++P + ++L AC +I
Sbjct: 373 DVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI 432
Query: 401 HKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
H +I + ++L + L MY G ++A R+ +I + D+
Sbjct: 433 HLSISESRLETDELLL---------SALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 130/263 (49%), Gaps = 3/263 (1%)
Query: 123 VLKAC-GAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
+L+ C + ++ ++ +H + GL D+ + +L++ Y C++ ++R VF R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 182 -DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
D+ WNS++SGY+ N D + +F + + I PD+ T V+ A+ G
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLL-NCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG 300
IH +VK+G D + S L+ +YA + +FD + +R + WN +I C+ G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 301 HAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYA 360
A++AL +F ++ +G P+ V +SACS L +G ++ + G E +
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 361 CIVDLLGRAGDLKKAVEFIQSMP 383
+VD+ G+ L+ A E Q MP
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMP 270
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 246/462 (53%), Gaps = 19/462 (4%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D F + +L C I+ H VV G E + ++ L+ Y + + Y +
Sbjct: 106 DYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGE--VNYGLR 163
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
VF+ + +V W +I G+ N F++A+ + EM+ G N +L ACG +
Sbjct: 164 VFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKD 223
Query: 133 SQKGHAIHGHAVKCGLD--------LDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV 184
G HG G D ++ + +L+ YAKC ++ +R +F+ MP+R +V
Sbjct: 224 IVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLV 283
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIH 243
SWNS+I+GY+ NG ++A+ +F DM D+G APD T ++V+ A + G IH
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDML---DLGIAPDKVTFLSVIRASMIQGCSQLGQSIH 340
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
Y+ KTG D + L+++YA G A+ F+ + + W +I HGH
Sbjct: 341 AYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGN 400
Query: 304 EALSMFQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYAC 361
EALS+FQ++ + G PDG+ +L +L ACSH G++ +G F M + +G+ + HY C
Sbjct: 401 EALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 362 IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNN 421
+VD+L RAG ++A +++MP++P N++GALL C IH+N+EL + + +
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELG 520
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVE 463
+G YV+L+ +Y AG+W D +R++++ + K +G+SSVE
Sbjct: 521 SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 190/364 (52%), Gaps = 17/364 (4%)
Query: 24 LHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDS-GLEYARKVFDKLSARDV 82
L C++ + + H ++ ++ +++L+D T ++ L YAR VF+ + V
Sbjct: 13 LENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSV 72
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
+ WN +I+GY+N +AL Y EM G +P+ +T+P+VLKAC R Q G +HG
Sbjct: 73 YIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGF 132
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
VK G +++++V L+ Y C EV +VF ++PQ ++V+W S+ISG+ N DA
Sbjct: 133 VVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDA 192
Query: 203 VLLFYDMFRHDDIGAPDNAT-LVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN----- 256
+ F +M + G N T +V +L A + DI G W H ++ G+ DP
Sbjct: 193 IEAFREMQSN---GVKANETIMVDLLVACGRCKDIVTGKWFHGFL--QGLGFDPYFQSKV 247
Query: 257 -----LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
L + LI +YA CG + AR +FD + +RT+ WN+II Y +G A+EAL MF
Sbjct: 248 GFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLD 307
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGD 371
++D G+ PD V FL ++ A G G + + G K A +V++ + GD
Sbjct: 308 MLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGD 367
Query: 372 LKKA 375
+ A
Sbjct: 368 AESA 371
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 249/469 (53%), Gaps = 11/469 (2%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLS-ARDVFCWNVVIK 90
+K+ HA+V+ G + + I ++ Y +D G + A++VFD L ++D+ WN +I
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSY---ADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 91 GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL 150
G++ A ++ +M+ + YTY +L AC E G ++HG +K GL+
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 151 DLFVGNALVSFYAK--CQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYD 208
NAL+S Y + +E + +F + +D++SWNS+I+G+ G +DAV F+
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVK-FFS 397
Query: 209 MFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC 268
R +I D A +L + + A + G IH K+G + + S LI +Y+ C
Sbjct: 398 YLRSSEIKVDDYA-FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKC 456
Query: 269 GYISMARAIFDRISDR-TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
G I AR F +IS + + WNA+I Y HG Q +L +F Q+ + ++ D V F +
Sbjct: 457 GIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAI 516
Query: 328 LSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQP 386
L+ACSH G++ +G +L ME Y + HYA VDLLGRAG + KA E I+SMP+ P
Sbjct: 517 LTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNP 576
Query: 387 GKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRK 446
V LG CR IE+A A L ++P + YV L+ MY D +W++ A V+K
Sbjct: 577 DPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKK 636
Query: 447 AIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIM 495
++E +KK G+S +E+ + + F A D S+P I+ ++ L + M
Sbjct: 637 MMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 154/302 (50%), Gaps = 12/302 (3%)
Query: 36 AHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANV 95
H + G D ++ +++D Y G YA +FD++ RD WN +I GY +
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLG--YANMLFDEMPKRDSVSWNTMISGYTSC 79
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
G +A ++ M+ +G+ + Y++ +LK + + G +HG +K G + +++VG
Sbjct: 80 GKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG 139
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLL--FYDMFRHD 213
++LV YAKC+ VE + + F E+ + + VSWN++I+G+ + A L +M
Sbjct: 140 SSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 214 DIGAPDNATLVTVL--PAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
+ A A L+T+L P F +H ++K G++ + + + +IS YA+CG +
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLK-----QVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 272 SMARAIFDRI-SDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSA 330
S A+ +FD + + + WN++I + H + A +F Q+ + D + LLSA
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 331 CS 332
CS
Sbjct: 315 CS 316
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 172/372 (46%), Gaps = 8/372 (2%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNV 87
K D ++ H V+ GG+E + ++ + LVD Y +E A + F ++S + WN
Sbjct: 115 KRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYA--KCERVEDAFEAFKEISEPNSVSWNA 172
Query: 88 VIKGYANVGPFAEALNVYDEMRC-AGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKC 146
+I G+ V A + M A T + T+ +L +H +K
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEM-PQRDIVSWNSMISGYTTNGYVDDAVLL 205
GL ++ + NA++S YA C V +++VF+ + +D++SWNSMI+G++ + + A L
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 206 FYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY 265
F M RH D T +L A + + G +H ++K G++ + + LIS+Y
Sbjct: 293 FIQMQRH--WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY 350
Query: 266 AN--CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVV 323
G + A ++F+ + + + WN+II + G +++A+ F L + ++ D
Sbjct: 351 IQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYA 410
Query: 324 FLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
F LL +CS L G + G +E + ++ + + G ++ A + Q +
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 384 IQPGKNVYGALL 395
+ + A++
Sbjct: 471 SKHSTVAWNAMI 482
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 4/161 (2%)
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
QK H +A+KCG D++V N ++ Y K + + +F+EMP+RD VSWN+MISGY
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGY 76
Query: 194 TTNGYVDDAVLLFYDMFRH-DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
T+ G ++DA LF M R D+ D + +L A G +H ++K G +
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDV---DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE 133
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
+ +GS L+ +YA C + A F IS+ WNA+I
Sbjct: 134 CNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALI 174
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 240/493 (48%), Gaps = 63/493 (12%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVD-KYTLHSDSGLEYARKVFDKLSARDVFCWN 86
K+ I++AHA ++ G D F +KLV T + YA + +++ + + F N
Sbjct: 50 KSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHN 109
Query: 87 VVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKC 146
VI+ YAN AL V+ EM P++Y++ FVLKAC A ++G IHG +K
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS------------------ 188
GL D+FV N LV+ Y + E +RKV + MP RD VSWNS
Sbjct: 170 GLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALF 229
Query: 189 -------------MISGYTTNGYVDDA------------------------------VLL 205
MISGY G V +A VL
Sbjct: 230 DEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 206 FYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY 265
++ D PD TLV+VL A A + G W+H YI K G++++ L + L+ +Y
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 266 ANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
+ CG I A +F S R + WN+II +HG ++AL +F ++V G +P+G+ F+
Sbjct: 350 SKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFI 409
Query: 326 CLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPI 384
+LSAC+H GML Q LF+ M + Y V + HY C+VDLLGR G +++A E + +P
Sbjct: 410 GVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Query: 385 QPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARV 444
+ +LLGAC+ +E AE A +L L+ ++ Y ++ +Y G+W+
Sbjct: 470 DEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDG 529
Query: 445 RKAIRENDIKKPI 457
R+ +R + + +
Sbjct: 530 RRNMRAERVNRSL 542
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D F +L C + S+ + H + G E + F+ LVD Y+ ++ A +
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYS--KCGKIDKALE 360
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC---GA 129
VF S RDV WN +I + G +AL ++ EM G PN T+ VL AC G
Sbjct: 361 VFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGM 420
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
++K + + ++ + +V + ++E + ++ NE+P
Sbjct: 421 LDQARKLFEMMSSVYRVEPTIEHY--GCMVDLLGRMGKIEEAEELVNEIP 468
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/490 (30%), Positives = 254/490 (51%), Gaps = 12/490 (2%)
Query: 16 DSFYYTDLLHLCKTTD---SIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYA-R 71
D T +L +C T + K HA ++ G++++ + KL+ Y G + R
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYF---KCGCSVSGR 210
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAER 131
VFD +S R+V VI G + L ++ MR PN TY L AC +
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 132 ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMIS 191
+G IH K G++ +L + +AL+ Y+KC +E + +F + D VS ++
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVT-VLPAFAQKADIHAGYWIHCYIVKTG 250
G NG ++A+ F M + G +A +V+ VL + G +H ++K
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQ---AGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK 387
Query: 251 MKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQ 310
+ + +GLI++Y+ CG ++ ++ +F R+ R WN++I + HGH AL +++
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE 447
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRA 369
++ ++P V FL LL ACSH G++ +G +L M E +G+ HY CI+D+LGRA
Sbjct: 448 EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRA 507
Query: 370 GDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILA 429
G LK+A FI S+P++P ++ ALLGAC H + E+ E+ AE+LF P+++ ++++A
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA 567
Query: 430 QMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQ 489
+Y G+W++ A+ K ++ + K G SS+E+E F D+ HP + I++ L
Sbjct: 568 NIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLS 627
Query: 490 SLDRIMGKEA 499
L +M E
Sbjct: 628 GLFPVMVDEG 637
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 3/314 (0%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A K+FD++ RDV N+V G+ + M +G + T VL C
Sbjct: 109 AIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHATLTIVLSVCDT 167
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
IH A+ G D ++ VGN L++ Y KC + R VF+ M R++++ ++
Sbjct: 168 PEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAV 227
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
ISG N +D + LF M R + P++ T ++ L A + I G IH + K
Sbjct: 228 ISGLIENELHEDGLRLFSLMRR--GLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKY 285
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
G++ + + S L+ +Y+ CG I A IF+ ++ I+ +G +EA+ F
Sbjct: 286 GIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRA 369
+++ AG+ D V +L L G L + + + ++++ +
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 370 GDLKKAVEFIQSMP 383
GDL + + MP
Sbjct: 406 GDLTDSQTVFRRMP 419
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 3/230 (1%)
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFR 211
L V N+L+S YAKC ++ + K+F+EMP RD++S N + G+ N + +L M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 212 HDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
G D+ATL VL IH + +G + ++G+ LI+ Y CG
Sbjct: 150 S---GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 272 SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
R +FD +S R + A+I + ++ L +F + + P+ V +L L+AC
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 332 SHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
S + + +G + + YG+ + ++D+ + G ++ A +S
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 281/572 (49%), Gaps = 78/572 (13%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
R ++Q + D + +L C+ + H QV+ G +++ +V +L+ Y
Sbjct: 147 RGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKA 206
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYAN---------------------------- 94
G Y +F ++ R+ WNV+IKG++
Sbjct: 207 GRMGDAY--NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTS 264
Query: 95 -------VGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
G F + L + MR +G + C A +HG+ +K G
Sbjct: 265 VLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGG 324
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
+ L NAL+ Y K +V+ + +F ++ + I SWNS+I+ + G +D+A+ LF
Sbjct: 325 FEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFS 384
Query: 208 DM-----------------------------------FRHDDIGA--PDNATLVTVLPAF 230
++ FR ++ T+ +L
Sbjct: 385 ELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSIC 444
Query: 231 AQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWN 290
A+ ++ G IH ++++T M + + + L+++YA CG +S +F+ I D+ + WN
Sbjct: 445 AELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWN 504
Query: 291 AIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ET 349
+II+ YGMHG A++ALSMF +++ +G PDG+ + +LSACSHAG++ +G ++F +M +
Sbjct: 505 SIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKR 564
Query: 350 YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEF 409
+G+ + HYACIVDLLGR G LK+A E +++MP++P V GALL +CR+HKN+++AE
Sbjct: 565 FGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEG 624
Query: 410 TAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHR 469
A +L VL+P G Y++L+ +Y G+W+++A VR ++ D+KK G S +E++
Sbjct: 625 IASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKY 684
Query: 470 KFGANDESHPYSAQIFETLQSLDRIMGKEAQT 501
KF + I+ L+ L M K+ T
Sbjct: 685 KFSSGSIVQSEFETIYPVLEDLVSHMLKKGPT 716
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 205/489 (41%), Gaps = 85/489 (17%)
Query: 19 YYTDLLHLCKTTDSIKKAHAQVVVGGHE-QDPFIVAKLVDKYTLHSDSGLEY-ARKVFDK 76
Y+ LL LC T ++ HAQV++ + + A L+ Y + GL AR VF+
Sbjct: 58 YFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVY---ARLGLLLDARNVFET 114
Query: 77 LSA---RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERAS 133
+S D+ WN ++K + G + AL +Y MR G T + Y P +L+AC
Sbjct: 115 VSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRF 174
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
A H ++ GL +L V N L++ Y K + + +F EMP R+ +SWN MI G+
Sbjct: 175 GLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGF 234
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPA------------------------ 229
+ + AV +F M R + PD T +VL
Sbjct: 235 SQEYDCESAVKIFEWMQREE--FKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAV 292
Query: 230 --------FAQKADIHA---GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
F+ A++ A +H Y++K G + + LI +Y G + A +F
Sbjct: 293 SGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLF 352
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD----AGLRPDGVVFLCLLSACSHA 334
+I ++ I WN++I + G EALS+F +L + ++ + V + ++ C+
Sbjct: 353 RQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQ 412
Query: 335 GMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP-IQPGKNVYGA 393
G + F+ M+ V + CI+ + +P + G+ ++G
Sbjct: 413 GRGDDSLEYFRQMQFSKVLANSVTICCILSICAE-------------LPALNLGREIHGH 459
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
++ +E + V NA L MY G + + V +AIR+ D+
Sbjct: 460 VIRTS-----------MSENILV---QNA-----LVNMYAKCGLLSEGSLVFEAIRDKDL 500
Query: 454 KKPIGYSSV 462
I ++S+
Sbjct: 501 ---ISWNSI 506
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 249/466 (53%), Gaps = 6/466 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K+ H + + D F+ L+D Y+ + ++ A +F++ + D+ WN ++ GY
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYS--RNRCMKEAEILFERHNF-DLVAWNAMMAGYT 493
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
+ L ++ M G + +T V K CG A +G +H +A+K G DLDL+
Sbjct: 494 QSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLW 553
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
V + ++ Y KC ++ A++ F+ +P D V+W +MISG NG + A +F M
Sbjct: 554 VSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG 613
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
+ PD T+ T+ A + + G IH +K DP +G+ L+ +YA CG I
Sbjct: 614 VL--PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
A +F RI I WNA++ HG +E L +F+Q+ G++PD V F+ +LSACSH
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Query: 334 AGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYG 392
+G++++ + ++M YG+ HY+C+ D LGRAG +K+A I+SM ++ ++Y
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 393 ALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREND 452
LL ACR+ + E + A KL L+P ++ YV+L+ MY A +W + R ++ +
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 453 IKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKE 498
+KK G+S +E+++ F +D S+ + I+ ++ + R + +E
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE 897
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 142/308 (46%), Gaps = 4/308 (1%)
Query: 69 YARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG 128
+AR VFD +S RD+ WN VI G A G EA+ ++ ++ G P++YT VLKA
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 129 A-ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWN 187
+ +H HA+K D FV AL+ Y++ + ++ + +F E D+V+WN
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWN 486
Query: 188 SMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIV 247
+M++GYT + + LF M + + D+ TL TV I+ G +H Y +
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGE--RSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 248 KTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALS 307
K+G LD + SG++ +Y CG +S A+ FD I W +I +G + A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 308 MFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLG 367
+F Q+ G+ PD L A S L QG + +VD+
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYA 664
Query: 368 RAGDLKKA 375
+ G + A
Sbjct: 665 KCGSIDDA 672
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 5/325 (1%)
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
D S ++ N + Y + G ++ L + +M + ++ T+ +L +
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G +H A+K GLDL L V N+L++ Y K ++ +R VF+ M +RD++SWNS+I+G
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKAD-IHAGYWIHCYIVKTGMKL 253
NG +AV LF + R PD T+ +VL A + + + +H + +K
Sbjct: 393 QNGLEVEAVCLFMQLLRCG--LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVS 450
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
D + + LI Y+ + A +F+R + + WNA++ Y + L +F +
Sbjct: 451 DSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
G R D + C + QG + G + I+D+ + GD+
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 374 KAVEFIQSMPIQPGKNVYGALLGAC 398
A S+P+ P + ++ C
Sbjct: 570 AAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 9 QQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLE 68
Q LR++ +DL+ L K T HA+++ + F++ L+ Y+ L
Sbjct: 41 QWFGFLRNAITSSDLM-LGKCT------HARILTFEENPERFLINNLISMYS--KCGSLT 91
Query: 69 YARKVFDKLSARDVFCWNVVIKGYAN-----VGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
YAR+VFDK+ RD+ WN ++ YA V +A ++ +R +R T +
Sbjct: 92 YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
LK C + HG+A K GLD D FV ALV+ Y K +V+ + +F EMP RD+
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 184 VSWNSMISGYTTNGYVDDAV 203
V WN M+ Y G+ ++A+
Sbjct: 212 VLWNLMLKAYLEMGFKEEAI 231
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
G H + + + F+ N L+S Y+KC + +R+VF++MP RD+VSWNS+++ Y
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 196 NGY-----VDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY-W----IHCY 245
+ + A LLF + R D + + +T+ P K +H+GY W H Y
Sbjct: 118 SSECVVENIQQAFLLF-RILRQDVV----YTSRMTLSPML--KLCLHSGYVWASESFHGY 170
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
K G+ D + L+++Y G + + +F+ + R + +WN +++ Y G +EA
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 306 LSMFQQLVDAGLRPDGVVFLCL 327
+ + +GL P+ + L
Sbjct: 231 IDLSSAFHSSGLNPNEITLRLL 252
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
+D+ G H I+ + L + LIS+Y+ CG ++ AR +FD++ DR + WN+I+
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 294 RCYGMHGHA-----QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
Y Q+A +F+ L + + +L C H+G +
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
G+ E +V++ + G +K+ + MP
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/464 (31%), Positives = 247/464 (53%), Gaps = 8/464 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYAR-KVFDKLSARDVFCWNVVIKGY 92
+ H Q+V G + D + L+ T++ G E A +V + + +DV CW V+I G
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALI---TMYLKCGKEEASYRVLETIPNKDVVCWTVMISGL 321
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
+G +AL V+ EM +G+ + V+ +C + G ++HG+ ++ G LD
Sbjct: 322 MRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDT 381
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
N+L++ YAKC ++ S +F M +RD+VSWN++ISGY N + A+LLF +M +
Sbjct: 382 PALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM-KF 440
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
+ D+ T+V++L A + + G IHC ++++ ++ + + L+ +Y+ CGY+
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
A+ FD IS + + W +I YG HG AL ++ + + +G+ P+ V+FL +LS+CS
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCS 560
Query: 333 HAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVY 391
H GM+ QG +F +M +GV + H AC+VDLL RA ++ A +F + +P +V
Sbjct: 561 HNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVL 620
Query: 392 GALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREN 451
G +L ACR + E+ + E + L P +AG YV L + +W D + +R
Sbjct: 621 GIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSL 680
Query: 452 DIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIM 495
+KK G+S +E+ F N SH S L+ L R M
Sbjct: 681 GLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREM 722
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 183/373 (49%), Gaps = 10/373 (2%)
Query: 13 VLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY 69
+L D+F + LL C + + H QV+V G D +I + LV+ Y L +
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYA--KFGLLAH 99
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
ARKVF+++ RDV W +I Y+ G EA ++ +EMR G P T +L G
Sbjct: 100 ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS--GV 157
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+Q +H AV G D D+ V N++++ Y KC V ++ +F++M QRD+VSWN+M
Sbjct: 158 LEITQL-QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTM 216
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
ISGY + G + + + L Y M R D + PD T L D+ G +HC IVKT
Sbjct: 217 ISGYASVGNMSEILKLLYRM-RGDGL-RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKT 274
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
G +D +L + LI++Y CG + + + I ++ + W +I G A++AL +F
Sbjct: 275 GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVF 334
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRA 369
+++ +G ++++C+ G G + + +G ++ + +
Sbjct: 335 SEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKC 394
Query: 370 GDLKKAVEFIQSM 382
G L K++ + M
Sbjct: 395 GHLDKSLVIFERM 407
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 162/306 (52%), Gaps = 7/306 (2%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H V+ G + D ++ +++ Y G A+ +FD++ RD+ WN +I GYA+VG
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVG--DAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
+E L + MR G P++ T+ L G + G +H VK G D+D+ +
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH-DDI 215
AL++ Y KC + EAS +V +P +D+V W MISG G + A+++F +M + D+
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
+ + +V+ + AQ G +H Y+++ G LD + LI++YA CG++ +
Sbjct: 345 SSE---AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSL 401
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRP-DGVVFLCLLSACSHA 334
IF+R+++R + WNAII Y + +AL +F+++ ++ D + LL ACS A
Sbjct: 402 VIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSA 461
Query: 335 GMLAQG 340
G L G
Sbjct: 462 GALPVG 467
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 5/240 (2%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
+N I ++ G + L+ + M P+ +T+P +LKAC + + G +IH +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVL 204
G D ++ ++LV+ YAK + +RKVF EM +RD+V W +MI Y+ G V +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 205 LFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISL 264
L +M R I P TL+ +L + + +H + V G D + + +++L
Sbjct: 134 LVNEM-RFQGI-KPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNL 188
Query: 265 YANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVF 324
Y C ++ A+ +FD++ R + WN +I Y G+ E L + ++ GLRPD F
Sbjct: 189 YCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 244/441 (55%), Gaps = 19/441 (4%)
Query: 61 LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
L + ++ AR++FD++S R V W ++ GY +A ++D M P +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEV 235
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG-NALVSFYAKCQEVEASRKVFNEMP 179
+ G Q G + + + + NA++S + E+ +R+VF+ M
Sbjct: 236 SWTSMLMGY---VQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMK 292
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
+R+ SW ++I + NG+ +A+ LF M + P TL+++L A A +H G
Sbjct: 293 ERNDASWQTVIKIHERNGFELEALDLFILMQKQG--VRPTFPTLISILSVCASLASLHHG 350
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
+H +V+ +D + S L+++Y CG + ++ IFDR + I +WN+II Y H
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 300 GHAQEALSMFQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEA 357
G +EAL +F ++ +G +P+ V F+ LSACS+AGM+ +G ++++ME+ +GV A
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL 417
HYAC+VD+LGRAG +A+E I SM ++P V+G+LLGACR H +++AEF A+KL +
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 418 DPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKF---GAN 474
+P N+G Y++L+ MY G+W D A +RK ++ ++K G S E+E+ F G N
Sbjct: 531 EPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGIN 590
Query: 475 DESHPYSAQIFETLQSLDRIM 495
SHP I + L LD ++
Sbjct: 591 --SHPEQESILKILDELDGLL 609
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 133/314 (42%), Gaps = 59/314 (18%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGY-ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG 128
ARK+FD ++ + WN ++ GY AN+ P +A ++DEM P+R
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMP-RDARKLFDEM------PDR----------- 77
Query: 129 AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
++ N LVS Y K E++ +RKVF+ MP+R++VSW +
Sbjct: 78 ----------------------NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTA 115
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
++ GY NG VD A LF+ M + + + +L F Q I C + +
Sbjct: 116 LVKGYVHNGKVDVAESLFWKMPEKNKV------SWTVMLIGFLQDGRIDDA----CKLYE 165
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
D + +I G + AR IFD +S+R++ W ++ YG + +A +
Sbjct: 166 MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKI 225
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
F D V + +L G + +LF+ M V A ++ LG+
Sbjct: 226 F----DVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNA----MISGLGQ 277
Query: 369 AGDLKKAVEFIQSM 382
G++ KA SM
Sbjct: 278 KGEIAKARRVFDSM 291
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
++ ARKVFD + R+V W ++KGY + G A +++ +M P + + +
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM------PEKNKVSWTVML 148
Query: 127 CGAERASQKGHAIHGHAVKCGL-----DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
G + + A C L D D +++ K V+ +R++F+EM +R
Sbjct: 149 IGFLQDGRIDDA-------CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSER 201
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYW 241
+++W +M++GY N VDDA +F D + + ++L + Q I
Sbjct: 202 SVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTSMLMGYVQNGRIEDAEE 255
Query: 242 IHCYIVKTGMKLDPNLG-SGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG 300
+ M + P + + +IS G I+ AR +FD + +R W +I+ + +G
Sbjct: 256 LF-----EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNG 310
Query: 301 HAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
EAL +F + G+RP + +LS C+ L G
Sbjct: 311 FELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/482 (30%), Positives = 254/482 (52%), Gaps = 6/482 (1%)
Query: 17 SFYYTDLLHLC--KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVF 74
S Y T L L + D ++ HA V+ G + I +V+ Y L A++VF
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV--KCGWLVGAKRVF 242
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
D+++ + ++ GY G +AL ++ ++ G + + + VLKAC +
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELN 302
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G IH K GL+ ++ VG LV FY KC E++ + F E+ + + VSW+++ISGY
Sbjct: 303 LGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYC 362
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
++AV F + R + ++ T ++ A + AD + G +H +K +
Sbjct: 363 QMSQFEEAVKTFKSL-RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGS 421
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
S LI++Y+ CG + A +F+ + + I W A I + +G+A EAL +F+++V
Sbjct: 422 QYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Query: 315 AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLK 373
G++P+ V F+ +L+ACSHAG++ QG TM Y VA + HY C++D+ R+G L
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 374 KAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYE 433
+A++F+++MP +P + L C HKN+EL E E+L LDP + YV+ +Y
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYT 601
Query: 434 DAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDR 493
AG+W++AA + K + E +KK + S ++ + +F D+ HP + +I+E L+ D
Sbjct: 602 WAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDG 661
Query: 494 IM 495
M
Sbjct: 662 FM 663
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 146/304 (48%), Gaps = 4/304 (1%)
Query: 100 EALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALV 159
EA EM AG + + Y+Y + +AC R+ G +H + + + N ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 160 SFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPD 219
Y +C+ +E + K+F+EM + + VS +MIS Y G +D AV LF M D P
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD--KPP 183
Query: 220 NATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFD 279
++ T+L + + G IH ++++ G+ + ++ +G++++Y CG++ A+ +FD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 280 RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQ 339
+++ + ++ Y G A++AL +F LV G+ D VF +L AC+ L
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 340 GWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALL-GAC 398
G + + G+ + +VD + + A Q + +P + A++ G C
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYC 362
Query: 399 RIHK 402
++ +
Sbjct: 363 QMSQ 366
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 5/319 (1%)
Query: 66 GLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
LE A K+FD++S + +I YA G +A+ ++ M +G P Y +LK
Sbjct: 133 SLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLK 192
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
+ RA G IH H ++ GL + + +V+ Y KC + +++VF++M + V+
Sbjct: 193 SLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVA 252
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHC 244
++ GYT G DA+ LF D+ G D+ VL A A +++ G IH
Sbjct: 253 CTGLMVGYTQAGRARDALKLFVDLVTE---GVEWDSFVFSVVLKACASLEELNLGKQIHA 309
Query: 245 YIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQE 304
+ K G++ + ++G+ L+ Y C A F I + W+AII Y +E
Sbjct: 310 CVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEE 369
Query: 305 ALSMFQQLVDAGLRP-DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
A+ F+ L + + + ACS G + + S+ + ++
Sbjct: 370 AVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALI 429
Query: 364 DLLGRAGDLKKAVEFIQSM 382
+ + G L A E +SM
Sbjct: 430 TMYSKCGCLDDANEVFESM 448
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 220/358 (61%), Gaps = 4/358 (1%)
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
G IH ++ G ++V N+L+ YA C +V ++ KVF++MP++D+V+WNS+I+G+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
NG ++A+ L+ +M + PD T+V++L A A+ + G +H Y++K G+ +
Sbjct: 67 NGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+ + L+ LYA CG + A+ +FD + D+ W ++I ++G +EA+ +F+ +
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 316 -GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLK 373
GL P + F+ +L ACSH GM+ +G++ F+ M E Y + H+ C+VDLL RAG +K
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 374 KAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYE 433
KA E+I+SMP+QP ++ LLGAC +H + +LAEF ++ L+PN++G YV+L+ MY
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 434 DAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
+W D ++RK + + +KK G+S VE+ + +F D+SHP S I+ L+ +
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 136/297 (45%), Gaps = 29/297 (9%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H+ V+ G ++ L+ Y D Y KVFDK+ +D+ WN VI G+A G
Sbjct: 11 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAY--KVFDKMPEKDLVAWNSVINGFAENG 68
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
EAL +Y EM G P+ +T +L AC A G +H + +K GL +L N
Sbjct: 69 KPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 128
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
L+ YA+C VE ++ +F+EM ++ VSW S+I G NG+ +A+ LF M + +
Sbjct: 129 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL- 187
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM----------KLDPNLG--SGLISL 264
P T V +L A + HC +VK G K++P + ++ L
Sbjct: 188 LPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 236
Query: 265 YANCGYISMARAIFDRISDR-TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
A G + A + + + +W ++ +HG + L+ F ++ L P+
Sbjct: 237 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 82/149 (55%)
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
AD+ G IH ++++G + + L+ LYANCG ++ A +FD++ ++ + WN++I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA 353
+ +G +EAL+++ ++ G++PDG + LLSAC+ G L G + M G+
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
++ ++DL R G +++A M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 262/482 (54%), Gaps = 11/482 (2%)
Query: 20 YTDLLHLC---KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY-ARKVFD 75
Y L+ C K+ +K+ + ++ G E + +++ +++ +H G+ AR++FD
Sbjct: 126 YDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRIL---LMHVKCGMIIDARRLFD 182
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK 135
++ R+++ + +I G+ N G + EA ++ M + +T+ +L+A +
Sbjct: 183 EIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV 242
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
G +H A+K G+ + FV L+ Y+KC ++E +R F MP++ V+WN++I+GY
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
+GY ++A+ L YDM D + D TL ++ + A + H +++ G + +
Sbjct: 303 HGYSEEALCLLYDM--RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEI 360
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+ L+ Y+ G + AR +FD++ + I WNA++ Y HG +A+ +F++++ A
Sbjct: 361 VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKK 374
+ P+ V FL +LSAC+++G+ QGW++F +M E +G+ HYAC+++LLGR G L +
Sbjct: 421 NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 375 AVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYED 434
A+ FI+ P++ N++ ALL ACR+ +N+EL AEKL+ + P G YV++ MY
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNS 540
Query: 435 AGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETL-QSLDR 493
G+ +AA V + + + + VE+ F + D Y+ + + Q +D
Sbjct: 541 MGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDE 600
Query: 494 IM 495
+M
Sbjct: 601 LM 602
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 147/304 (48%), Gaps = 10/304 (3%)
Query: 98 FAEALNVYD--EMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
F EA +++ E+RC+ TY +++AC ++ + ++G + G + + ++
Sbjct: 103 FREAFELFEILEIRCSFKV-GVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N ++ + KC + +R++F+E+P+R++ S+ S+ISG+ G +A LF M+ +++
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMW--EEL 219
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
+ T +L A A I+ G +H +K G+ + + GLI +Y+ CG I AR
Sbjct: 220 SDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDAR 279
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
F+ + ++T WN +I Y +HG+++EAL + + D+G+ D ++ +
Sbjct: 280 CAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLA 339
Query: 336 MLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNV--YGA 393
L ++ G +VD + G + A + P KN+ + A
Sbjct: 340 KLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKL---PRKNIISWNA 396
Query: 394 LLGA 397
L+G
Sbjct: 397 LMGG 400
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 217/405 (53%), Gaps = 6/405 (1%)
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+KG G EA+ + + +G TY +L+ C + KG IH G
Sbjct: 82 TLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVG 138
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
L+ ++ L+ YA +++ + +F + RD++ WN+MISGY G + + ++Y
Sbjct: 139 FALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
DM R + I PD T +V A + + G H ++K +K + + S L+ +Y
Sbjct: 199 DM-RQNRI-VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFK 256
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
C S +FD++S R + W ++I YG HG E L F+++ + G RP+ V FL +
Sbjct: 257 CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVV 316
Query: 328 LSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQP 386
L+AC+H G++ +GW+ F +M+ YG+ HYA +VD LGRAG L++A EF+ P +
Sbjct: 317 LTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE 376
Query: 387 GKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRK 446
V+G+LLGACRIH N++L E A K LDP N G YV+ A Y G + A++VR+
Sbjct: 377 HPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRR 436
Query: 447 AIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
+ +KK GYS +EL+ +F +D SH S +I++ + +
Sbjct: 437 KMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEM 481
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 116/240 (48%), Gaps = 8/240 (3%)
Query: 20 YTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
Y LL CK K+ HAQ+ V G + ++ KL+ Y L D L+ A +F
Sbjct: 111 YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGD--LQTAGILFRS 168
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
L RD+ WN +I GY G E L +Y +MR P++YT+ V +AC A + G
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
H +K + ++ V +ALV Y KC +VF+++ R++++W S+ISGY +
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G V + + F M ++ P+ T + VL A + G W H Y +K ++P
Sbjct: 289 GKVSEVLKCFEKM--KEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPE 345
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 261/493 (52%), Gaps = 16/493 (3%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYAR 71
+ F ++ L C ++++K H + G E + LVD Y S G + A
Sbjct: 106 NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMY---SKCGRINEAE 162
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT--PNRYTYPFVLKACGA 129
KVF ++ R + WN +I G+ + G ++AL+ + M+ A P+ +T +LKAC +
Sbjct: 163 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 222
Query: 130 ERASQKGHAIHGHAVKCGLDL--DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWN 187
G IHG V+ G + +LV Y KC + ++RK F+++ ++ ++SW+
Sbjct: 223 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 282
Query: 188 SMISGYTTNGYVDDAVLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHCYI 246
S+I GY G +A+ LF R ++ + D+ L +++ FA A + G +
Sbjct: 283 SLILGYAQEGEFVEAMGLFK---RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
VK L+ ++ + ++ +Y CG + A F + + + W +I YG HG ++++
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF-QTMETYGVAKSEAHYACIVDL 365
+F +++ + PD V +L +LSACSH+GM+ +G +LF + +ET+G+ HYAC+VDL
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 459
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
LGRAG LK+A I +MPI+P ++ LL CR+H +IEL + + L +D N Y
Sbjct: 460 LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANY 519
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIF 485
V+++ +Y AG W + R+ +KK G S VE+E F + ++SHP + I
Sbjct: 520 VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQ 579
Query: 486 ETLQSLDRIMGKE 498
ETL+ +R + +E
Sbjct: 580 ETLKEAERRLREE 592
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 161/313 (51%), Gaps = 4/313 (1%)
Query: 30 TDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVI 89
+D + H ++ G + L+D Y + + Y KVFD + R+V W+ ++
Sbjct: 22 SDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY--KVFDSMPERNVVSWSALM 79
Query: 90 KGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLD 149
G+ G +L+++ EM G PN +T+ LKACG A +KG IHG +K G +
Sbjct: 80 SGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFE 139
Query: 150 LDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
+ + VGN+LV Y+KC + + KVF + R ++SWN+MI+G+ GY A+ F M
Sbjct: 140 MMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMM 199
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL--DPNLGSGLISLYAN 267
+ PD TL ++L A + I+AG IH ++V++G + L+ LY
Sbjct: 200 QEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVK 259
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
CGY+ AR FD+I ++T+ W+++I Y G EA+ +F++L + + D +
Sbjct: 260 CGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSI 319
Query: 328 LSACSHAGMLAQG 340
+ + +L QG
Sbjct: 320 IGVFADFALLRQG 332
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 136/266 (51%), Gaps = 7/266 (2%)
Query: 115 PN-RYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRK 173
PN R +L+ C + S +G +H + +K G L+L N L+ Y KC+E + K
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 174 VFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQK 233
VF+ MP+R++VSW++++SG+ NG + ++ LF +M R P+ T T L A
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY--PNEFTFSTNLKACGLL 120
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
+ G IH + +K G ++ +G+ L+ +Y+ CG I+ A +F RI DR++ WNA+I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 294 RCYGMHGHAQEALSMFQQLVDAGL--RPDGVVFLCLLSACSHAGMLAQGWDL--FQTMET 349
+ G+ +AL F + +A + RPD LL ACS GM+ G + F
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 350 YGVAKSEAHYACIVDLLGRAGDLKKA 375
+ S +VDL + G L A
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSA 266
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 224/397 (56%), Gaps = 4/397 (1%)
Query: 67 LEYARKVFDKLSAR-DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
L A K+F ++S + WN ++KGY + + + ++ +++ G + + V+
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
+C A G ++H + VK LDL + V N+L+ Y K ++ + ++F E ++++
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVIT 500
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
WN+MI+ Y + A+ LF M + P + TLVT+L A + G IH Y
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSEN--FKPSSITLVTLLMACVNTGSLERGQMIHRY 558
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
I +T +++ +L + LI +YA CG++ +R +FD + + WN +I YGMHG + A
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESA 618
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDL 365
+++F Q+ ++ ++P G FL LLSAC+HAG++ QG LF M Y V + HY+C+VDL
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDL 678
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
L R+G+L++A + SMP P ++G LL +C H E+ AE+ DP N G Y
Sbjct: 679 LSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYY 738
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
++LA MY AG+W++A R R+ +RE+ + K G+S V
Sbjct: 739 IMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 162/314 (51%), Gaps = 4/314 (1%)
Query: 29 TTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVV 88
+ +S++K +A ++ GG ++ F+ +KL+ Y + L + +VF ++ RD+F WN +
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNL--SSRVFHLVTRRDIFLWNSI 96
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK-CG 147
IK + + G +A +L + M +G +P+ +T P V+ AC G +HG +K G
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
D + VG + V FY+KC ++ + VF+EMP RD+V+W ++ISG+ NG + +
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLC 216
Query: 208 DMFRH-DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA 266
M D+ P+ TL A + + G +H + VK G+ + S + S Y+
Sbjct: 217 KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYS 276
Query: 267 NCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
G S A F + D +F W +II G +E+ MF ++ + G+ PDGVV C
Sbjct: 277 KSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISC 336
Query: 327 LLSACSHAGMLAQG 340
L++ ++ QG
Sbjct: 337 LINELGKMMLVPQG 350
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 199/441 (45%), Gaps = 13/441 (2%)
Query: 27 CKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVF 83
C ++K+ H V G F+ + + Y+ + Y F +L D+F
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS--FRELGDEDMF 297
Query: 84 CWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHA 143
W +I A G E+ +++ EM+ G P+ ++ G +G A HG
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 144 VKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-DIVSWNSMISGYTTNGYVDDA 202
++ LD V N+L+S Y K + + + K+F + + + +WN+M+ GY
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 203 VLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
+ LF + ++G D+A+ +V+ + + + G +HCY+VKT + L ++ + L
Sbjct: 418 IELFRKI---QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL 474
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
I LY G +++A +F +D + WNA+I Y +++A+++F ++V +P
Sbjct: 475 IDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
+ + LL AC + G L +G + + + + + A ++D+ + G L+K+ E +
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA 593
Query: 382 MPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAG-RYVILAQMYEDAGQWQD 440
Q + ++ +H ++E A +++ D G ++ L AG +
Sbjct: 594 GN-QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ 652
Query: 441 AARVRKAIRENDIKKPIGYSS 461
++ + + D+K + + S
Sbjct: 653 GKKLFLKMHQYDVKPNLKHYS 673
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF 206
GL ++FV + L+S YA + S +VF+ + +RDI WNS+I + +NG ++ F
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN--LGSGLISL 264
+ M +PD+ T V+ A A+ H G ++H ++K G D N +G+ +
Sbjct: 114 FSMLLSGQ--SPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG-GFDRNTAVGASFVYF 170
Query: 265 YANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL---RPDG 321
Y+ CG++ A +FD + DR + W AII + +G ++ L ++ AG +P+
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
C ACS+ G L +G L G+A S+ + + ++G+ +A
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEA 284
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 246/492 (50%), Gaps = 26/492 (5%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D+F +T L C + + + H+Q+ G D ++ +VD Y G AR
Sbjct: 77 DNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGC--ARN 134
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
FD++ R W +I GY G A ++D+M P V K A
Sbjct: 135 AFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM------------PHV-KDVVIYNA 181
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSF------YAKCQEVEASRKVFNEMPQRDIVSW 186
G G D ++++ Y ++++A+RK+F+ MP+R++VSW
Sbjct: 182 MMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N+MI GY N + + LF +M + PD+ T+++VLPA + + G W HC++
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLD-PDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+ + + + ++ +Y+ CG I A+ IFD + ++ + WNA+I Y ++G+A+ AL
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAAL 360
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
+F ++ +PD + L +++AC+H G++ +G F M G+ HY C+VDLL
Sbjct: 361 DLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLL 419
Query: 367 GRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYV 426
GRAG LK+A + I +MP +P + + L AC +K+IE AE +K L+P N G YV
Sbjct: 420 GRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYV 479
Query: 427 ILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFE 486
+L +Y +W D V+ +R+N KK +G S +E+ +F + D +HP+ I
Sbjct: 480 LLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHL 539
Query: 487 TLQSLDRIMGKE 498
L L M +E
Sbjct: 540 VLGDLLMHMNEE 551
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 150/325 (46%), Gaps = 14/325 (4%)
Query: 63 SDSGLEYARKVFDKLSARD-VFCWNVVIKGYANVGPFAEALNVYDEMRCAGT-TPNRYTY 120
S G+ YARK+FD+ RD F N +IK Y + ++ +Y ++R P+ +T+
Sbjct: 22 SAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTF 81
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
+ K+C +G +H + G D++V +V YAK ++ +R F+EMP
Sbjct: 82 TTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPH 141
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
R VSW ++ISGY G +D A LF M D+ ++ F + D+ +
Sbjct: 142 RSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV-----VIYNAMMDGFVKSGDMTSAR 196
Query: 241 WIHCYIV-KTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
+ + KT + + +I Y N I AR +FD + +R + WN +I Y +
Sbjct: 197 RLFDEMTHKTVITW-----TTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQN 251
Query: 300 GHAQEALSMFQQL-VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
QE + +FQ++ L PD V L +L A S G L+ G ++ + K
Sbjct: 252 KQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKV 311
Query: 359 YACIVDLLGRAGDLKKAVEFIQSMP 383
I+D+ + G+++KA MP
Sbjct: 312 CTAILDMYSKCGEIEKAKRIFDEMP 336
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/469 (31%), Positives = 246/469 (52%), Gaps = 39/469 (8%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
L AR VFD + RDV WN ++ GYA G EAL Y E R +G N +++ +L A
Sbjct: 129 LVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 127 CGAERASQKGHAIHGHAV-------------------KCG------------LDLDLFVG 155
C R Q HG + KCG D+ +
Sbjct: 189 CVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIW 248
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
L+S YAK ++EA+ K+F EMP+++ VSW ++I+GY G + A+ LF M +
Sbjct: 249 TTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMI---AL 305
Query: 216 GA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
G P+ T + L A A A + G IH Y+++T ++ + + S LI +Y+ G + +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 275 RAIFDRISDRTIFV-WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
+F D+ V WN +I HG +AL M ++ ++P+ + +L+ACSH
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
Query: 334 AGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYG 392
+G++ +G F++M +G+ + HYAC++DLLGRAG K+ + I+ MP +P K+++
Sbjct: 426 SGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWN 485
Query: 393 ALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREND 452
A+LG CRIH N EL + A++L LDP ++ Y++L+ +Y D G+W+ ++R +++
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRR 545
Query: 453 IKKPIGYSSVELESGHRKFGANDESHPYS--AQIFETLQSLDRIMGKEA 499
+ K S +E+E F +D SH ++ +I+ L +L ++ +EA
Sbjct: 546 VNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEEA 594
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 43/352 (12%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
+ F + LL C + + ++AH QV+V G + + ++D Y +E A++
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA--KCGQMESAKR 235
Query: 73 VFDKLSARDV----------------------FC---------WNVVIKGYANVGPFAEA 101
FD+++ +D+ FC W +I GY G A
Sbjct: 236 CFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRA 295
Query: 102 LNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSF 161
L+++ +M G P ++T+ L A + + + G IHG+ ++ + + V ++L+
Sbjct: 296 LDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDM 355
Query: 162 YAKCQEVEASRKVFNEMPQR-DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
Y+K +EAS +VF + D V WN+MIS +G A+ + DM + P+
Sbjct: 356 YSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR--VQPNR 413
Query: 221 ATLVTVLPAFAQKADIHAGY-WIHCYIVKTGMKLDPNLGSGLISLYANCG-YISMARAIF 278
TLV +L A + + G W V+ G+ D + LI L G + + R I
Sbjct: 414 TTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIE 473
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSA 330
+ + +WNAI+ +HG+ + +L+ L P+ LLS+
Sbjct: 474 EMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIK--LDPESSAPYILLSS 523
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 131/333 (39%), Gaps = 70/333 (21%)
Query: 109 RCAGTTPNRYTYPF-----VLKACGAERASQKGHAIHGHA-------------------- 143
R T PF +L+ CG ++ ++G IH H
Sbjct: 33 RLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMY 92
Query: 144 VKCGLDLD------------LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMIS 191
+KCG +D L+ N +VS Y K + +R VF+ MP+RD+VSWN+M+
Sbjct: 93 MKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVI 152
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
GY +G + +A L FY FR I + + +L A + + H ++ G
Sbjct: 153 GYAQDGNLHEA-LWFYKEFRRSGIKF-NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGF 210
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG-------------- 297
+ L +I YA CG + A+ FD ++ + I +W +I Y
Sbjct: 211 LSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCE 270
Query: 298 -----------------MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
G AL +F++++ G++P+ F L A + L G
Sbjct: 271 MPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHG 330
Query: 341 WDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
++ M V + + ++D+ ++G L+
Sbjct: 331 KEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLE 363
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 242/467 (51%), Gaps = 41/467 (8%)
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG--AERA 132
++ ++ W I G AEA + +M AG PN T+ +L CG +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 133 SQKGHAIHGHAVKCGLDLD-LFVGNALVSFYAK--------------------------- 164
G +HG+A K GLD + + VG A++ Y+K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 165 ----CQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
+V+ + K+F++MP+RD++SW +MI+G+ GY ++A+L F +M PD
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM--QISGVKPDY 206
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR 280
++ L A + G W+H Y++ K + + + LI LY CG + AR +F
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 281 ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
+ RT+ WN++I + +G+A E+L F+++ + G +PD V F L+ACSH G++ +G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 341 WDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACR 399
FQ M+ Y ++ HY C+VDL RAG L+ A++ +QSMP++P + V G+LL AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 400 IH-KNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIG 458
H NI LAE + L L+ + YVIL+ MY G+W+ A+++R+ ++ +KK G
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 459 YSSVELESGHRKFGANDESH---PYSAQIFETLQSLDRIMGKEAQTL 502
+SS+E++ F A D +H Y ++ E + S R+ G +TL
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVETL 493
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
++ A K+FDK+ RD+ W +I G+ G EAL + EM+ +G P+ L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C A G +H + + ++ V N+L+ Y +C VE +R+VF M +R +VSW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
NS+I G+ NG ++++ F M + PD T L A + H +
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKM--QEKGFKPDAVTFTGALTACS-----------HVGL 322
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
V+ G++ Y + + + RIS R I + ++ Y G ++AL
Sbjct: 323 VEEGLR-----------------YFQIMKCDY-RISPR-IEHYGCLVDLYSRAGRLEDAL 363
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACS-HAGMLAQGWDLFQTMETYGVAKSEAHYACIVDL 365
+ Q + ++P+ VV LL+ACS H + L + + V KS ++Y + ++
Sbjct: 364 KLVQSM---PMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNV-KSHSNYVILSNM 419
Query: 366 LGRAGDLKKAVEFIQSM-----PIQPG 387
G + A + + M QPG
Sbjct: 420 YAADGKWEGASKMRRKMKGLGLKKQPG 446
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/477 (31%), Positives = 253/477 (53%), Gaps = 14/477 (2%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
RR++ + D F Y + C + I + H+ + G E+D I L+ Y
Sbjct: 121 RRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKC 180
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
G YARK+FD+++ RD WN +I GY+ G +A++++ +M G P+ T
Sbjct: 181 GQVG--YARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVS 238
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+L AC + G + A+ + L F+G+ L+S Y KC +++++R+VFN+M ++D
Sbjct: 239 MLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKD 298
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYW 241
V+W +MI+ Y+ NG +A LF++M + G +PD TL TVL A + G
Sbjct: 299 RVAWTAMITVYSQNGKSSEAFKLFFEM---EKTGVSPDAGTLSTVLSACGSVGALELGKQ 355
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
I + + ++ + + +GL+ +Y CG + A +F+ + + WNA+I Y GH
Sbjct: 356 IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGH 415
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYA 360
A+EAL +F ++ + P + F+ +LSAC HAG++ QG F M + +G+ HY
Sbjct: 416 AKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYT 472
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL-DP 419
I+DLL RAG L +A EF++ P +P + + A+LGAC K++ + E L + +
Sbjct: 473 NIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEA 532
Query: 420 NNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDE 476
NAG YVI + + D W ++A++R +R+ + K G S +E+E +F A +
Sbjct: 533 KNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 194/368 (52%), Gaps = 17/368 (4%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
LL C + + +++ AQ+++ E+ F++ K V+ Y+ +F +
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL------GDFNYSSFLFSVTEEPNH 96
Query: 83 FCWNVVIKGYANVGPFAEA-LNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
+ +N +I+G N EA L++Y M+ +G P+++TY FV AC G ++H
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
K GL+ D+ + ++L+ YAKC +V +RK+F+E+ +RD VSWNSMISGY+ GY D
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
A+ LF M ++ PD TLV++L A + D+ G + + + L LGS L
Sbjct: 217 AMDLFRKM--EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL 274
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
IS+Y CG + AR +F+++ + W A+I Y +G + EA +F ++ G+ PD
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDA 334
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH----YACIVDLLGRAGDLKKAVE 377
+LSAC G L G + +ET+ S H +VD+ G+ G +++A+
Sbjct: 335 GTLSTVLSACGSVGALELG----KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
Query: 378 FIQSMPIQ 385
++MP++
Sbjct: 391 VFEAMPVK 398
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 249/500 (49%), Gaps = 38/500 (7%)
Query: 29 TTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVV 88
T +++ HA++ V G +D +V V L L+YA ++ D+ +F N +
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 89 IKGYANVGPFAEALNVYDEMRCAGT--TPNRYTYPFVLKACGAERASQKGHAIHGHAVKC 146
I+ + ++ + Y + +G P+ YT F+++AC R + G +HG ++
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRR 137
Query: 147 GLDLDLFVGNALVSFYA-------------------------------KCQEVEASRKVF 175
G D D V L+S YA +C +V +RK+F
Sbjct: 138 GFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLF 197
Query: 176 NEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNAT-LVTVLPAFAQKA 234
MP+RD ++WN+MISGY G +A+ +F+ M G N +++VL A Q
Sbjct: 198 EGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE---GVKVNGVAMISVLSACTQLG 254
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
+ G W H YI + +K+ L + L+ LYA CG + A +F + ++ ++ W++ +
Sbjct: 255 ALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVA 353
M+G ++ L +F + G+ P+ V F+ +L CS G + +G F +M +G+
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIE 374
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEK 413
HY C+VDL RAG L+ AV IQ MP++P V+ +LL A R++KN+EL ++K
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKK 434
Query: 414 LFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGA 473
+ L+ N G YV+L+ +Y D+ W + + VR++++ ++K G S +E+ +F
Sbjct: 435 MLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFV 494
Query: 474 NDESHPYSAQIFETLQSLDR 493
D+SHP QI + + R
Sbjct: 495 GDKSHPKYTQIDAVWKDISR 514
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 235/446 (52%), Gaps = 27/446 (6%)
Query: 66 GLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
L A +VFD++ RD WN +I + G E L ++ M + P+ +T+ +LK
Sbjct: 432 ALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK 491
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD--- 182
AC G IH VK G+ + VG +L+ Y+KC +E + K+ + QR
Sbjct: 492 ACTGGSLGY-GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS 550
Query: 183 -----------------IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLV 224
VSWNS+ISGY +DA +LF M ++G PD T
Sbjct: 551 GTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM---EMGITPDKFTYA 607
Query: 225 TVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR 284
TVL A A G IH ++K ++ D + S L+ +Y+ CG + +R +F++ R
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRR 667
Query: 285 TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
WNA+I Y HG +EA+ +F++++ ++P+ V F+ +L AC+H G++ +G + F
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 727
Query: 345 QTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHK- 402
M+ YG+ HY+ +VD+LG++G +K+A+E I+ MP + ++ LLG C IH+
Sbjct: 728 YMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRN 787
Query: 403 NIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
N+E+AE L LDP ++ Y +L+ +Y DAG W+ + +R+ +R +KK G S V
Sbjct: 788 NVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Query: 463 ELESGHRKFGANDESHPYSAQIFETL 488
EL+ F D++HP +I+E L
Sbjct: 848 ELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 175/395 (44%), Gaps = 38/395 (9%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
+ +Q+++ Y +L C ++ + HA + D + +D Y
Sbjct: 270 KEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC 329
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
+ ++ A+ +FD + +N +I GY+ +AL ++ + +G + +
Sbjct: 330 DN--MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSG 387
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
V +AC + +G I+G A+K L LD+ V NA + Y KCQ + + +VF+EM +RD
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
VSWN++I+ + NG + + LF M R PD T ++L A + G I
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI--EPDEFTFGSILKA-CTGGSLGYGMEI 504
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRT----------------- 285
H IVK+GM + ++G LI +Y+ CG I A I R R
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 286 ---IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWD 342
WN+II Y M +++A +F ++++ G+ PD + +L C++ G
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 343 LFQTMETYGVAKSEAH---YAC--IVDLLGRAGDL 372
+ V K E Y C +VD+ + GDL
Sbjct: 625 IHAQ-----VIKKELQSDVYICSTLVDMYSKCGDL 654
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 182/426 (42%), Gaps = 57/426 (13%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD----------------------------- 64
K+AHA +++ G F++ L+ YT D
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKS 127
Query: 65 SGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVL 124
+ + A F+ + RDV WN ++ GY G +++ V+ +M G + T+ +L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 125 KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV 184
K C + G IHG V+ G D D+ +AL+ YAK + S +VF +P+++ V
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHC 244
SW+++I+G N + A+ F +M + + + +VL + A +++ G +H
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVN--AGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 245 YIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQE 304
+ +K+ D + + + +YA C + A+ +FD + +NA+I Y H +
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365
Query: 305 ALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA--KSEAHYACI 362
AL +F +L+ +GL D + + AC+ L++G ++ YG+A S + C+
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG------LQIYGLAIKSSLSLDVCV 419
Query: 363 ----VDLLGRAGDLKKAVEFIQSMPI--------------QPGKNVYGALLGACRIHKNI 404
+D+ G+ L +A M Q GK L + I
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 405 ELAEFT 410
E EFT
Sbjct: 480 EPDEFT 485
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 43/286 (15%)
Query: 92 YANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD 151
Y V F+ + +++ TT + FV K C + A + G H H + G
Sbjct: 27 YRRVPSFSYFTDFLNQVNSVSTT----NFSFVFKECAKQGALELGKQAHAHMIISGFRPT 82
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMI--------------------- 190
FV N L+ Y ++ ++ VF++MP RD+VSWN MI
Sbjct: 83 TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 191 ----------SGYTTNGYVDDAVLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAG 239
SGY NG ++ +F DM R G D T +L + D G
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE---GIEFDGRTFAIILKVCSFLEDTSLG 199
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
IH +V+ G D S L+ +YA + +F I ++ W+AII +
Sbjct: 200 MQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQN 259
Query: 300 GHAQEALSMFQQL--VDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
AL F+++ V+AG+ ++ +L +C+ L G L
Sbjct: 260 NLLSLALKFFKEMQKVNAGVSQS--IYASVLRSCAALSELRLGGQL 303
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 253/480 (52%), Gaps = 12/480 (2%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
+ F + +L C+ + H VV G E ++ +++ Y S + +E A
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT-MEAACL 168
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
+F + ++ W +I G+ ++G L +Y +M Y ++A + +
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
G IH +K G +L V N+++ Y +C + ++ F+EM +D+++WN++IS
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
+ +A+L+F R + G P+ T +++ A A A ++ G +H I + G
Sbjct: 289 LERSDS-SEALLMFQ---RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF 344
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV-WNAIIRCYGMHGHAQEALSMFQ 310
+ L + LI +YA CG I ++ +F I DR V W +++ YG HG+ EA+ +F
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRA 369
++V +G+RPD +VF+ +LSAC HAG++ +G F ME+ YG+ Y C+VDLLGRA
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 370 GDLKKAVEFIQSMPIQPGKNVYGALLGACRIHK-NIELAEFTAEKLFVLDPNNAGRYVIL 428
G + +A E ++ MP +P ++ +GA+LGAC+ HK N ++ A K+ L P G YV+L
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 429 AQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETL 488
+ +Y G+W D ARVRK +R KK G S + +E+ F +D+ P ++ ++ L
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 172/369 (46%), Gaps = 39/369 (10%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
+E AR +FD++ RDV W +I GYA+ A A + EM GT+PN +T VLK+
Sbjct: 61 VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKS 120
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQ-EVEASRKVFNEMPQRDIVS 185
C + G +HG VK G++ L+V NA+++ YA C +EA+ +F ++ ++ V+
Sbjct: 121 CRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVT 180
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
W ++I+G+T G + ++ M + P T+ + A A + G IH
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AVRASASIDSVTTGKQIHAS 238
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
++K G + + + + ++ LY CGY+S A+ F + D+ + WN +I + EA
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEA 297
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDL 365
L MFQ+ G P+ F L++AC++ L G L + G K+ ++D+
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 366 LGRAGDLK--------------------------------KAVEFIQSM---PIQPGKNV 390
+ G++ +AVE M I+P + V
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 391 YGALLGACR 399
+ A+L ACR
Sbjct: 418 FMAVLSACR 426
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFR 211
+ N +VS++ K VE +R +F+EMP RD+V+W +MI+GY ++ Y A F++M +
Sbjct: 46 ILATNLIVSYFEKGL-VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK 104
Query: 212 HDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
+P+ TL +VL + + G +H +VK GM+ + + ++++YA C +
Sbjct: 105 QGT--SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS-V 161
Query: 272 SMARA--IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV--DAGLRPDGVVFLCL 327
+M A IF I + W +I + G L M++Q++ +A + P +
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
SA + + G + ++ G + I+DL R G L +A + M
Sbjct: 222 ASASIDS--VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 234/403 (58%), Gaps = 10/403 (2%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
L YA++VF + ++ V WN +I G+A +L+ + +M+ +G P+ +T +L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C ++ + G +HG ++ L+ DLFV +++S Y C E+ + +F+ M + +VSW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA---DIHAGYWIH 243
N++I+GY NG+ D A+ +F M + ++++P F + + G H
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYG-----IQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
Y +K ++ D + LI +YA G I+ + +F+ + +++ WNA+I YG+HG A+
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACI 362
EA+ +F+++ G PD + FL +L+AC+H+G++ +G M+ ++G+ + HYAC+
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740
Query: 363 VDLLGRAGDLKKAVEFI-QSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNN 421
+D+LGRAG L KA+ + + M + ++ +LL +CRIH+N+E+ E A KLF L+P
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVEL 464
YV+L+ +Y G+W+D +VR+ + E ++K G S +EL
Sbjct: 801 PENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 167/311 (53%), Gaps = 10/311 (3%)
Query: 34 KKAHAQVVVGGHE--QDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKG 91
+K H Q+V G D + +++ Y + + +R VFD L ++++F WN VI
Sbjct: 104 RKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSP--DDSRFVFDALRSKNLFQWNAVISS 160
Query: 92 YANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL 150
Y+ + E L + EM P+ +TYP V+KAC G A+HG VK GL
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVE 220
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
D+FVGNALVSFY V + ++F+ MP+R++VSWNSMI ++ NG+ +++ LL +M
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 211 RHDDIGA--PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC 268
+ GA PD ATLVTVLP A++ +I G +H + VK + + L + L+ +Y+ C
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 269 GYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG--LRPDGVVFLC 326
G I+ A+ IF +++ + WN ++ + G + +Q++ G ++ D V L
Sbjct: 341 GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Query: 327 LLSACSHAGML 337
+ C H L
Sbjct: 401 AVPVCFHESFL 411
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 154/335 (45%), Gaps = 9/335 (2%)
Query: 13 VLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY 69
+L D F Y ++ C + H VV G +D F+ LV Y H +
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHG--FVTD 240
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRC----AGTTPNRYTYPFVLK 125
A ++FD + R++ WN +I+ +++ G E+ + EM P+ T VL
Sbjct: 241 ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP 300
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
C ER G +HG AVK LD +L + NAL+ Y+KC + ++ +F +++VS
Sbjct: 301 VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
WN+M+ G++ G + M + D T++ +P ++ + + +HCY
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
+K + + + ++ YA CG +S A+ +F I +T+ WNA+I + + +
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
L Q+ +GL PD LLSACS L G
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++AHA + E D FI L+D Y + + + KVF+ L + WN +I GY
Sbjct: 617 REAHAYALKHLLEDDAFIACSLIDMYA--KNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG-HAIHGHAVKCGLDLDL 152
G EA+ +++EM+ G P+ T+ VL AC +G + GL +L
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 153 FVGNALVSFYAKCQEVE-ASRKVFNEMPQR-DIVSWNSMIS 191
++ + +++ A R V EM + D+ W S++S
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 228/410 (55%), Gaps = 7/410 (1%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
+E R++F + V WN ++ GY+N + EA++ + +M+ P++ T +L +
Sbjct: 366 VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE-MPQRDIVS 185
C R + G IHG ++ + + + + L++ Y++C+++E S +F++ + + DI
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIAC 485
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
WNSMISG+ N A++LF M + P+ + TVL + ++ + G H
Sbjct: 486 WNSMISGFRHNMLDTKALILFRRM-HQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGL 544
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
+VK+G D + + L +Y CG I AR FD + + +WN +I YG +G EA
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVD 364
+ ++++++ +G +PDG+ F+ +L+ACSH+G++ G ++ +M+ +G+ HY CIVD
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR 424
LGRAG L+ A + ++ P + ++ LL +CR+H ++ LA AEKL LDP ++
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA 724
Query: 425 YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV----ELESGHRK 470
YV+L+ Y QW D+A ++ + +N + K G S +L+SG RK
Sbjct: 725 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGNDLDSGFRK 774
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 182/409 (44%), Gaps = 52/409 (12%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K H +V G + D ++ +L+D Y D +YARKVFD++S RDV+ WN +
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDG--DYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 94 NVGPFAEALNVYD-------------------------------EMRCAGTTPNRYTYPF 122
VG EA V+D M C G P+R+T
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQ-EVEASRKVFNEMPQR 181
VL AC G HG AVK GLD ++FVGNAL+S YAKC V+ +VF + Q
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQK------AD 235
+ VS+ ++I G V +AV +F M D+ L +L A + ++
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGV--QVDSVCLSNILSISAPREGCDSLSE 261
Query: 236 IHA---GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAI 292
I+ G IHC ++ G D +L + L+ +YA ++ A IF + + + WN +
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 293 IRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
I +G + +++ ++ D+G +P+ V + +L AC +G + G +F ++ V
Sbjct: 322 IVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSV 381
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ---PGKNVYGALLGAC 398
+ A ++ ++A+ + M Q P K +L +C
Sbjct: 382 SAWNA----MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 140/349 (40%), Gaps = 50/349 (14%)
Query: 4 VSRRLQQISVLRDSFYYTDLLHLC-KTTDSI--KKAHAQVVVGGHEQDPFIVAKLVDKYT 60
V +R+ L F +L C K D + + H V G +++ F+ L+ Y
Sbjct: 125 VYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYA 184
Query: 61 LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
++Y +VF+ LS + + VI G A EA+ ++ M G +
Sbjct: 185 -KCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCL 243
Query: 121 PFVLKACGAERA---------SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEAS 171
+L ++ G IH A++ G DL + N+L+ YAK +++ +
Sbjct: 244 SNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGA 303
Query: 172 RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA 231
+F EMP+ ++VSWN MI G+ D +V M D P+ T ++VL A
Sbjct: 304 ELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRM--RDSGFQPNEVTCISVLGACF 361
Query: 232 QKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNA 291
+ D+ G R IF I ++ WNA
Sbjct: 362 RSGDVETG-----------------------------------RRIFSSIPQPSVSAWNA 386
Query: 292 IIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
++ Y + H +EA+S F+Q+ L+PD +LS+C+ L G
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 108 MRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQE 167
MR G N+Y +L+ ER G IHG V+ G+ D ++ N L+ Y +C +
Sbjct: 1 MRSGG---NKYLAS-LLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGD 56
Query: 168 VEASRKVFNEMPQRD-------------------------------IVSWNSMISGYTTN 196
+ +RKVF+EM RD +VSWN+MIS
Sbjct: 57 GDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRK 116
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G+ + A++++ M D P TL +VL A ++ D G H VKTG+ +
Sbjct: 117 GFEEKALVVYKRMV--CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIF 174
Query: 257 LGSGLISLYANCGYI-SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+G+ L+S+YA CG+I +F+ +S + A+I EA+ MF+ + +
Sbjct: 175 VGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEK 234
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
G++ D V +LS + +G D E YG + + C+ LG GDL
Sbjct: 235 GVQVDSVCLSNILSISAP----REGCDSLS--EIYGNELGKQIH-CLALRLGFGGDL 284
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 8/214 (3%)
Query: 6 RRLQQISVL-RDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTL 61
RR+ Q +VL + + +L C S+ ++ H VV G+ D F+ L D Y
Sbjct: 507 RRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCK 566
Query: 62 HSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYP 121
+ ++ AR+ FD + ++ WN +I GY + G EA+ +Y +M +G P+ T+
Sbjct: 567 CGE--IDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 122 FVLKACGAERASQKGHAIHGHAVKC-GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP- 179
VL AC + G I + G++ +L +V + +E + K+ P
Sbjct: 625 SVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPY 684
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
+ V W ++S +G V A + + R D
Sbjct: 685 KSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLD 718
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/536 (28%), Positives = 258/536 (48%), Gaps = 66/536 (12%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
++ C T ++ A A ++ QD ++ + + T S L+ A ++ +V
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACT--SFKRLDLAVSTMTQMQEPNV 836
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
F +N + KG+ +L +Y M +P+ YTY ++KA + AS+ G ++ H
Sbjct: 837 FVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA--SSFASRFGESLQAH 894
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT-------- 194
K G + + L+ FY+ + +RKVF+EMP+RD ++W +M+S Y
Sbjct: 895 IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA 954
Query: 195 ------------------TNGY-----VDDAVLLFYDMFRHDDIG--------------- 216
NGY ++ A LF M D I
Sbjct: 955 NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYR 1014
Query: 217 --------------APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
PD T+ TV+ A A + G +H Y ++ G LD +GS L+
Sbjct: 1015 EAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALV 1074
Query: 263 SLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
+Y+ CG + A +F + + +F WN+II HG AQEAL MF ++ ++P+ V
Sbjct: 1075 DMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAV 1134
Query: 323 VFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
F+ + +AC+HAG++ +G ++++M + Y + + HY +V L +AG + +A+E I +
Sbjct: 1135 TFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGN 1194
Query: 382 MPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDA 441
M +P ++GALL CRIHKN+ +AE KL VL+P N+G Y +L MY + +W+D
Sbjct: 1195 MEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDV 1254
Query: 442 ARVRKAIRENDIKKPI-GYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMG 496
A +R +RE I+K G SS+ ++ F A D+SH S ++ L + MG
Sbjct: 1255 AEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMG 1310
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 252/481 (52%), Gaps = 9/481 (1%)
Query: 20 YTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
+T L C T D +K H VVV G + I LV Y + + +R+V +
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE--MSESRRVLLQ 405
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE-RASQK 135
+ RDV WN +I GYA +AL + MR G + N T VL AC ++
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 465
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
G +H + V G + D V N+L++ YAKC ++ +S+ +FN + R+I++WN+M++
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
+G+ ++ + L M R + + D + L A A+ A + G +H VK G + D
Sbjct: 526 HGHGEEVLKLVSKM-RSFGV-SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 583
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+ + +Y+ CG I + +R++ WN +I G HG+ +E + F ++++
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 643
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKK 374
G++P V F+ LL+ACSH G++ +G + + +G+ + H C++DLLGR+G L +
Sbjct: 644 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 703
Query: 375 AVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYED 434
A FI MP++P V+ +LL +C+IH N++ AE L L+P + YV+ + M+
Sbjct: 704 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 763
Query: 435 AGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRI 494
G+W+D VRK + +IKK S V+L+ FG D +HP + +I+ L+ + ++
Sbjct: 764 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 823
Query: 495 M 495
+
Sbjct: 824 I 824
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 3/311 (0%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A VF ++ +D+ WN ++ + N G +AL + M +G + N T+ L AC
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+KG +HG V GL + +GNALVS Y K E+ SR+V +MP+RD+V+WN++
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 417
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKAD-IHAGYWIHCYIVK 248
I GY + D A+ F M R + + + + T+V+VL A D + G +H YIV
Sbjct: 418 IGGYAEDEDPDKALAAFQTM-RVEGV-SSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
G + D ++ + LI++YA CG +S ++ +F+ + +R I WNA++ HGH +E L +
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
++ G+ D F LSA + +L +G L G + D+ +
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 595
Query: 369 AGDLKKAVEFI 379
G++ + V+ +
Sbjct: 596 CGEIGEVVKML 606
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 186/384 (48%), Gaps = 12/384 (3%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIKK----AHAQVVVGGHEQDPFIVAKLVDKYTL 61
R++ + + SF L+ C + S+ + H V G D ++ ++ Y +
Sbjct: 30 RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV 89
Query: 62 HSDSGL-EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
+ GL +RKVF+++ R+V W ++ GY++ G E +++Y MR G N +
Sbjct: 90 Y---GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSM 146
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
V+ +CG + G I G VK GL+ L V N+L+S V+ + +F++M +
Sbjct: 147 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 206
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFR-HDDIGAPDNATLVTVLPAFAQKADIHAG 239
RD +SWNS+ + Y NG+++++ +F M R HD++ + +TL++VL + G
Sbjct: 207 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ---KWG 263
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
IH +VK G + + L+ +YA G A +F ++ + + WN+++ +
Sbjct: 264 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 323
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
G + +AL + ++ +G + V F L+AC +G L + G+ ++
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 383
Query: 360 ACIVDLLGRAGDLKKAVEFIQSMP 383
+V + G+ G++ ++ + MP
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMP 407
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 178 MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADI 236
MP R+ VSWN+M+SG G + + F M D+G P + + +++ A + +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC---DLGIKPSSFVIASLVTACGRSGSM 57
Query: 237 -HAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
G +H ++ K+G+ D + + ++ LY G +S +R +F+ + DR + W +++
Sbjct: 58 FREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKS 355
Y G +E + +++ + G+ + ++S+C + G + + G+
Sbjct: 118 YSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESK 177
Query: 356 EAHYACIVDLLGRAGDLKKA 375
A ++ +LG G++ A
Sbjct: 178 LAVENSLISMLGSMGNVDYA 197
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 252/481 (52%), Gaps = 9/481 (1%)
Query: 20 YTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
+T L C T D +K H VVV G + I LV Y + + +R+V +
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE--MSESRRVLLQ 422
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE-RASQK 135
+ RDV WN +I GYA +AL + MR G + N T VL AC ++
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER 482
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
G +H + V G + D V N+L++ YAKC ++ +S+ +FN + R+I++WN+M++
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
+G+ ++ + L M R + + D + L A A+ A + G +H VK G + D
Sbjct: 543 HGHGEEVLKLVSKM-RSFGV-SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+ + +Y+ CG I + +R++ WN +I G HG+ +E + F ++++
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 660
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKK 374
G++P V F+ LL+ACSH G++ +G + + +G+ + H C++DLLGR+G L +
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 720
Query: 375 AVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYED 434
A FI MP++P V+ +LL +C+IH N++ AE L L+P + YV+ + M+
Sbjct: 721 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 780
Query: 435 AGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRI 494
G+W+D VRK + +IKK S V+L+ FG D +HP + +I+ L+ + ++
Sbjct: 781 TGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKL 840
Query: 495 M 495
+
Sbjct: 841 I 841
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 3/311 (0%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A VF ++ +D+ WN ++ + N G +AL + M +G + N T+ L AC
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+KG +HG V GL + +GNALVS Y K E+ SR+V +MP+RD+V+WN++
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKAD-IHAGYWIHCYIVK 248
I GY + D A+ F M R + + + + T+V+VL A D + G +H YIV
Sbjct: 435 IGGYAEDEDPDKALAAFQTM-RVEGV-SSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
G + D ++ + LI++YA CG +S ++ +F+ + +R I WNA++ HGH +E L +
Sbjct: 493 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 552
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
++ G+ D F LSA + +L +G L G + D+ +
Sbjct: 553 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 369 AGDLKKAVEFI 379
G++ + V+ +
Sbjct: 613 CGEIGEVVKML 623
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 186/384 (48%), Gaps = 12/384 (3%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIKK----AHAQVVVGGHEQDPFIVAKLVDKYTL 61
R++ + + SF L+ C + S+ + H V G D ++ ++ Y +
Sbjct: 47 RKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGV 106
Query: 62 HSDSGL-EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
+ GL +RKVF+++ R+V W ++ GY++ G E +++Y MR G N +
Sbjct: 107 Y---GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSM 163
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
V+ +CG + G I G VK GL+ L V N+L+S V+ + +F++M +
Sbjct: 164 SLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE 223
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFR-HDDIGAPDNATLVTVLPAFAQKADIHAG 239
RD +SWNS+ + Y NG+++++ +F M R HD++ + +TL++VL + G
Sbjct: 224 RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQ---KWG 280
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
IH +VK G + + L+ +YA G A +F ++ + + WN+++ +
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVND 340
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
G + +AL + ++ +G + V F L+AC +G L + G+ ++
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 400
Query: 360 ACIVDLLGRAGDLKKAVEFIQSMP 383
+V + G+ G++ ++ + MP
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMP 424
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 134/265 (50%), Gaps = 3/265 (1%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
AR +FD + R+ WN ++ G VG + E + + +M G P+ + ++ ACG
Sbjct: 11 ARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR 70
Query: 130 ERAS-QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
+ ++G +HG K GL D++V A++ Y V SRKVF EMP R++VSW S
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
++ GY+ G ++ + ++ M R + +G +N ++ V+ + D G I +VK
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGM-RGEGVGCNEN-SMSLVISSCGLLKDESLGRQIIGQVVK 188
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
+G++ + + LIS+ + G + A IFD++S+R WN+I Y +GH +E+ +
Sbjct: 189 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 248
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSH 333
F + + LLS H
Sbjct: 249 FSLMRRFHDEVNSTTVSTLLSVLGH 273
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 161 FYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APD 219
Y K V+ +R +F+ MP R+ VSWN+M+SG G + + F M D+G P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC---DLGIKPS 57
Query: 220 NATLVTVLPAFAQKADI-HAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
+ + +++ A + + G +H ++ K+G+ D + + ++ LY G +S +R +F
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLA 338
+ + DR + W +++ Y G +E + +++ + G+ + ++S+C +
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDES 177
Query: 339 QGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
G + + G+ A ++ +LG G++ A
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 214
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 222/405 (54%), Gaps = 33/405 (8%)
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTP-NRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+ YAN G +ALN++ +M + P + + + LK+C A G ++H H+VK
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF- 206
+ FVG AL+ Y KC V +RK+F+E+PQR+ V WN+MIS YT G V +AV L+
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 207 -YDMFRHDD---------IGAPDNA-----------------TLVTVLPAFAQKADIHAG 239
D+ ++ +G D + L+T+L + + I A
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 240 YWI---HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCY 296
I H Y + ++ P L SGL+ Y CG I + +FD + DR + W+++I Y
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKS 355
+HG A+ AL FQ++ A + PD + FL +L ACSHAG+ + F+ M+ YG+ S
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRAS 318
Query: 356 EAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLF 415
+ HY+C+VD+L R G ++A + IQ+MP +P +GALLGACR + IELAE A +L
Sbjct: 319 KDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELL 378
Query: 416 VLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYS 460
+++P N YV+L ++Y G+ ++A R+R ++E+ +K G S
Sbjct: 379 MVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 124/304 (40%), Gaps = 52/304 (17%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
HA V +PF+ L+D Y + +ARK+FD++ R+ WN +I Y + G
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYG--KCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 97 PFAEALNVYDEMRC--------------AGT-------------------TPNRYTYPFV 123
EA+ +Y+ M GT PN T +
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
+ AC A A + IH +A + ++ + + LV Y +C + + VF+ M RD+
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
V+W+S+IS Y +G + A+ F +M PD+ + VL KA HAG
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKV--TPDDIAFLNVL-----KACSHAGLADE 301
Query: 244 CYIVKTGMKLDPNLG------SGLISLYANCGYISMARAIFDRISDR-TIFVWNAII--- 293
+ M+ D L S L+ + + G A + + ++ T W A++
Sbjct: 302 ALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGAC 361
Query: 294 RCYG 297
R YG
Sbjct: 362 RNYG 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 10/175 (5%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
IK+ H+ E P + + LV+ Y + Y + VFD + RDV W+ +I Y
Sbjct: 201 IKEIHSYAFRNLIEPHPQLKSGLVEAYG--RCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG----AERASQKGHAIHGHAVKCGL 148
A G AL + EM A TP+ + VLKAC A+ A + G GL
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGL 315
Query: 149 DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV-SWNSMISGYTTNGYVDDA 202
+ LV ++ E + KV MP++ +W +++ G ++ A
Sbjct: 316 RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 236/429 (55%), Gaps = 9/429 (2%)
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
VF + RDV WN +I + G E L + EM+ G + T +L A R
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVF--NEMPQRDIVSWNSMI 190
+ G H ++ G+ + + + L+ Y+K + S+K+F + +RD +WNSMI
Sbjct: 435 KEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Query: 191 SGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTG 250
SGYT NG+ + L+F M + P+ T+ ++LPA +Q + G +H + ++
Sbjct: 494 SGYTQNGHTEKTFLVFRKMLEQNI--RPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 251 MKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQ 310
+ + + S L+ +Y+ G I A +F + +R + +I YG HG + A+S+F
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRA 369
+ ++G++PD + F+ +LSACS++G++ +G +F+ M E Y + S HY CI D+LGR
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 370 GDLKKAVEFIQSMPIQPG-KNVYGALLGACRIHKNIELAEFTAEKLFVLD--PNNAGRYV 426
G + +A EF++ + + ++G+LLG+C++H +ELAE +E+L D N +G V
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 427 ILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFE 486
+L+ MY + +W+ +VR+ +RE +KK +G S +E+ F + D+ HP+S++I++
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYD 791
Query: 487 TLQSLDRIM 495
+ L + M
Sbjct: 792 VIDGLAKDM 800
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 180/364 (49%), Gaps = 13/364 (3%)
Query: 20 YTDLLHLCKTTDSIKKA---HAQVVVGGHE--QDPFIVAKLVDKYTLHSDSGLEYARKVF 74
+ ++ + SIKKA + ++ G E +D F+V+ + Y D +E +R+VF
Sbjct: 217 FVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGD--IESSRRVF 274
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDE-MRCAGTTPNRYTYPFVLKACGAERAS 133
D R++ WN +I Y E++ ++ E + + TY A A +
Sbjct: 275 DSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQV 334
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
+ G HG K +L + + N+L+ Y++C V S VF M +RD+VSWN+MIS +
Sbjct: 335 ELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAF 394
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
NG D+ ++L Y+M + D T+ +L A + + G H ++++ G++
Sbjct: 395 VQNGLDDEGLMLVYEMQKQG--FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQF 452
Query: 254 DPNLGSGLISLYANCGYISMARAIFD--RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
+ + S LI +Y+ G I +++ +F+ ++R WN++I Y +GH ++ +F++
Sbjct: 453 E-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRK 511
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGD 371
+++ +RP+ V +L ACS G + G L + ++ + +VD+ +AG
Sbjct: 512 MLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGA 571
Query: 372 LKKA 375
+K A
Sbjct: 572 IKYA 575
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 164/355 (46%), Gaps = 22/355 (6%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYT--LHSDSGLEY- 69
D++ Y+ L C T ++K H ++ + L++ Y L++ EY
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 70 -ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG 128
RKVFD + ++V WN +I Y G AEA + M P+ ++ V A
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 129 AERASQKGHAIHGHAVKCGLDL--DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
R+ +K + +G +K G + DLFV ++ +S YA+ ++E+SR+VF+ +R+I W
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N+MI Y N + +++ LF + +I D T + A + + G H ++
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEI-VSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
K +L + + L+ +Y+ CG + + +F + +R + WN +I + +G E L
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACS-----------HAGMLAQGWDLFQTMETY 350
+ ++ G + D + LLSA S HA ++ QG F+ M +Y
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSY 458
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 139/297 (46%), Gaps = 16/297 (5%)
Query: 47 QDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYD 106
Q P I ++L + D + AR++FD + WN +I G+ EAL Y
Sbjct: 38 QTPSIRSRLSK---ICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYS 94
Query: 107 EMRCAG--TTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAK 164
M+ T + YTY LKAC + + G A+H H ++C + V N+L++ Y
Sbjct: 95 RMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVS 154
Query: 165 CQ------EVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
C E + RKVF+ M ++++V+WN++IS Y G +A F M R + P
Sbjct: 155 CLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV--KP 212
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL--GSGLISLYANCGYISMARA 276
+ V V PA + I + ++K G + +L S IS+YA G I +R
Sbjct: 213 SPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRR 272
Query: 277 IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG-LRPDGVVFLCLLSACS 332
+FD +R I VWN +I Y + E++ +F + + + + D V +L SA S
Sbjct: 273 VFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 238/427 (55%), Gaps = 12/427 (2%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPF--VLKA 126
A K+F ++ ++V W +I G EAL+++ M RC + +R PF V+ A
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSR---PFTCVITA 234
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C A G +HG +K G + +V +L++FYA C+ + SRKVF+E + W
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
+++SGY+ N +DA+ +F M R+ + P+ +T + L + + + G +H
Sbjct: 295 TALLSGYSLNKKHEDALSIFSGMLRNSIL--PNQSTFASGLNSCSALGTLDWGKEMHGVA 352
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
VK G++ D +G+ L+ +Y++ G ++ A ++F +I ++I WN+II HG + A
Sbjct: 353 VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAF 412
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET--YGVAKSEAHYACIVD 364
+F Q++ PD + F LLSACSH G L +G LF M + + + HY C+VD
Sbjct: 413 VIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVD 472
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR 424
+LGR G LK+A E I+ M ++P + V+ ALL ACR+H +++ E A +F LD ++
Sbjct: 473 ILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAA 532
Query: 425 YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQI 484
YV+L+ +Y AG+W + +++R +++N I K G S V + +F + D+ P+ ++I
Sbjct: 533 YVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRI 590
Query: 485 FETLQSL 491
+E L+ L
Sbjct: 591 YEKLEFL 597
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 152/334 (45%), Gaps = 19/334 (5%)
Query: 51 IVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRC 110
+ K++ YT + L A +FD++ RDV WN +I G G A+ ++DEM
Sbjct: 68 LYTKMITGYT--RSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-- 123
Query: 111 AGTTPNRYTYPFVLKACGAERASQKGHA---IHGHAVKCGLDLDLFVGNALVSFYAKCQE 167
P R + G R+ + A + VK D N++V Y + +
Sbjct: 124 ----PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGK 174
Query: 168 VEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVL 227
V+ + K+F +MP ++++SW +MI G N +A+ LF +M R + V+
Sbjct: 175 VDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC--CIKSTSRPFTCVI 232
Query: 228 PAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF 287
A A H G +H I+K G + + + LI+ YANC I +R +FD +
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA 292
Query: 288 VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM 347
VW A++ Y ++ ++ALS+F ++ + P+ F L++CS G L G ++
Sbjct: 293 VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVA 352
Query: 348 ETYGVAKSEAHYACIVDLLGRAGDLKKAVE-FIQ 380
G+ +V + +G++ AV FI+
Sbjct: 353 VKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 127/332 (38%), Gaps = 57/332 (17%)
Query: 131 RASQKGHAIHGHAVKC-GLDLDLFVGNALVSFYAKCQEVEASRKVFN------------- 176
RA H IHG + + ++ L+ + + ++ +R+VFN
Sbjct: 13 RAFSISHVIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKM 72
Query: 177 ------------------EMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
EMP RD+VSWNSMISG G ++ AV LF +M P
Sbjct: 73 ITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM--------P 124
Query: 219 DNATL---VTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
+ + + V F A + VK D + ++ Y G + A
Sbjct: 125 ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDAL 179
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
+F ++ + + W +I + + EAL +F+ ++ ++ F C+++AC++A
Sbjct: 180 KLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAP 239
Query: 336 MLAQGWDLFQTMETYGVAKSEAHYACIVDLLG---RAGDLKKAVEFIQSMPIQPGKNVYG 392
G + + G E A ++ R GD +K + + V+
Sbjct: 240 AFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFD----EKVHEQVAVWT 295
Query: 393 ALLGACRIHKNIE--LAEFTAEKLFVLDPNNA 422
ALL ++K E L+ F+ + PN +
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQS 327
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 257/534 (48%), Gaps = 68/534 (12%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
D ++ L+H CK T S++ HAQ++ G + A+LV +L +Y+ +F
Sbjct: 28 DESHFISLIHACKDTASLRHVHAQILRRG-VLSSRVAAQLVSCSSLLKSP--DYSLSIFR 84
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK 135
R+ F N +I+G F ++ + M G P+R T+PFVLK+
Sbjct: 85 NSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWL 144
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE------------------ 177
G A+H +K +D D FV +LV YAK +++ + +VF E
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 178 -----------------MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG---- 216
MP+R+ SW+++I GY +G ++ A LF M + +
Sbjct: 205 GYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTL 264
Query: 217 -------------------------APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
P+ T+ VL A ++ + +G IH YI+ G+
Sbjct: 265 INGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGI 324
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
KLD +G+ L+ +YA CG + A +F ++ + I W A+I+ + +HG +A+ F+Q
Sbjct: 325 KLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQ 384
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAG 370
++ +G +PD VVFL +L+AC ++ + G + F +M Y + + HY +VDLLGRAG
Sbjct: 385 MMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAG 444
Query: 371 DLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQ 430
L +A E +++MPI P + AL AC+ HK AE ++ L LDP G Y+ L +
Sbjct: 445 KLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDK 504
Query: 431 MYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQI 484
+ G QD + R ++++ ++ +G+S +EL+ KF A D SH + +I
Sbjct: 505 THASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEI 558
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 115/250 (46%), Gaps = 16/250 (6%)
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
F D +PD + ++++ A A + +H I++ G+ L + + L+S +
Sbjct: 19 FPADRQASPDESHFISLIHACKDTASLRH---VHAQILRRGV-LSSRVAAQLVSCSSLLK 74
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
+ +IF +R FV NA+IR + + ++ F ++ G++PD + F +L
Sbjct: 75 SPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLK 134
Query: 330 ACSHAGMLAQGWDLF-QTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGK 388
+ S G G L T++ + S + +VD+ + G LK A + + P + K
Sbjct: 135 SNSKLGFRWLGRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFEESPDRIKK 193
Query: 389 N---VYGALL-GACRIHKNIELAEFTAEKLFVLDPN-NAGRYVILAQMYEDAGQWQDAAR 443
++ L+ G CR K++ + A LF P N+G + L + Y D+G+ A +
Sbjct: 194 ESILIWNVLINGYCRA-KDMHM----ATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQ 248
Query: 444 VRKAIRENDI 453
+ + + E ++
Sbjct: 249 LFELMPEKNV 258
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 235/432 (54%), Gaps = 14/432 (3%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
++ AR +FD++ R+V W +I GY A +++ M P + +
Sbjct: 188 VDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM------PEKTEVSWTSML 241
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVG-NALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
G + + A V + + + NA++ + + E+ +R+VF+ M RD +
Sbjct: 242 LGYTLSGRIEDAEEFFEV---MPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT 298
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
W MI Y G+ +A+ LF M + P +L+++L A A + G +H +
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQG--VRPSFPSLISILSVCATLASLQYGRQVHAH 356
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
+V+ D + S L+++Y CG + A+ +FDR S + I +WN+II Y HG +EA
Sbjct: 357 LVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEA 416
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVD 364
L +F ++ +G P+ V + +L+ACS+AG L +G ++F++ME+ + V + HY+C VD
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR 424
+LGRAG + KA+E I+SM I+P V+GALLGAC+ H ++LAE A+KLF +P+NAG
Sbjct: 477 MLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGT 536
Query: 425 YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVEL-ESGHRKFGANDESHPYSAQ 483
YV+L+ + +W D A VRK +R N++ K G S +E+ + H ++HP A
Sbjct: 537 YVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596
Query: 484 IFETLQSLDRIM 495
I L+ D ++
Sbjct: 597 ILMMLEKTDGLL 608
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 121/306 (39%), Gaps = 57/306 (18%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
ARK FD L + + WN ++ GY + G EA ++DEM +
Sbjct: 36 ARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM--------------------S 75
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
ER ++ N LVS Y K + + +R VF MP+R++VSW +M
Sbjct: 76 ER-------------------NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAM 116
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
+ GY G V +A LF+ M +++ + + I ++ +
Sbjct: 117 VKGYMQEGMVGEAESLFWRMPERNEV------SWTVMFGGLIDDGRIDKARKLYDMMPVK 170
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
+ N+ GL G + AR IFD + +R + W +I Y + A +F
Sbjct: 171 DVVASTNMIGGL----CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRA 369
+ + + V + +L + +G + + F+ M V A A IV G
Sbjct: 227 EVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVI---ACNAMIVG-FGEV 278
Query: 370 GDLKKA 375
G++ KA
Sbjct: 279 GEISKA 284
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 255/487 (52%), Gaps = 15/487 (3%)
Query: 18 FYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVF 74
F Y+ +L+ C S K HA+++V D + L+D Y D + A VF
Sbjct: 301 FTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD--MREAFYVF 358
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERAS 133
++ ++ WN +I G + G +A+ +Y + R + P+ YT+ + A
Sbjct: 359 GRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERF 418
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
G +HG K G + +FVG L+S Y K +E E+++KVF+ M +RD+V W MI G+
Sbjct: 419 VHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGH 478
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
+ G + AV F +M+R + D +L +V+ A + A + G HC ++TG
Sbjct: 479 SRLGNSELAVQFFIEMYREKN--RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC 536
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
++ L+ +Y G A IF S+ + WN+++ Y HG ++ALS F+Q++
Sbjct: 537 VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
+ G PD V +L LL+ACSH G QG L+ M+ G+ HY+C+V+L+ +AG +
Sbjct: 597 ENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVD 656
Query: 374 KAVEFIQSMPIQPGKN---VYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQ 430
+A+E I+ P PG N ++ LL AC +N+++ + AE++ LDP + +++L+
Sbjct: 657 EALELIEQSP--PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSN 714
Query: 431 MYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRK-FGANDESHP-YSAQIFETL 488
+Y G+W+D A +R+ IR K G S +E+ + + + F + D+S+P +Q + L
Sbjct: 715 LYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQDEL 774
Query: 489 QSLDRIM 495
L R M
Sbjct: 775 NRLKRNM 781
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 9/396 (2%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
+S +T L+ +C + + ++Q++ G+ + + ++ Y+ D LE AR+
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD--LESARR 255
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
+FD ++ RD WN +I G + L + M +G P ++TY VL C +
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
G IH + DL + NAL+ Y C ++ + VF + ++VSWNS+ISG
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
+ NG+ + A+L++ + R PD T + A A+ G +H + K G +
Sbjct: 376 CSENGFGEQAMLMYRRLLRM-STPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYE 434
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
+G+ L+S+Y A+ +FD + +R + +W +I + G+++ A+ F ++
Sbjct: 435 RSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEM 494
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGD 371
R DG ++ ACS ML QG ++F + G + +VD+ G+ G
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 372 LKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELA 407
+ A E I S+ P + ++LGA H +E A
Sbjct: 554 YETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKA 588
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 157/342 (45%), Gaps = 12/342 (3%)
Query: 22 DLLHLCKTTDSIKKA---HAQVVVGGH---EQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
+L C + +K+A HA V+ G + P+ L+ Y LE ARKVFD
Sbjct: 99 ELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV--RCGSLEQARKVFD 156
Query: 76 KLSARDVFCWNVVIKGYANVGPFAE-ALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
K+ R+V +N + Y+ FA A + M PN T+ +++ C
Sbjct: 157 KMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVL 216
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G +++ +K G ++ V +++ Y+ C ++E++R++F+ + RD V+WN+MI G
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
N ++D ++ F +M P T VL ++ G IH I+ + D
Sbjct: 277 KNDKIEDGLMFFRNMLMSG--VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD 334
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
L + L+ +Y +CG + A +F RI + + WN+II +G ++A+ M+++L+
Sbjct: 335 LPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLR 394
Query: 315 AGL-RPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKS 355
RPD F +SA + G L + G +S
Sbjct: 395 MSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERS 436
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 153/327 (46%), Gaps = 24/327 (7%)
Query: 29 TTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVV 88
T S+K++ V + P+ L+ Y S LE ARKVFDK+ R++ V
Sbjct: 2 TRGSMKRSVLFVETDAAAEYPYANNNLISMYV--RCSSLEQARKVFDKMPQRNI----VT 55
Query: 89 IKGYANVGPFAE-ALNVYDEMRCAGTTPNRYTYPF---------VLKACGAERASQKGHA 138
+ G + V + +++ ++ G+ + P + + C + ++
Sbjct: 56 LFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQ 115
Query: 139 IHGHAVKCGLDL---DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
IH + G + N L+S Y +C +E +RKVF++MP R++VS+N++ S Y+
Sbjct: 116 IHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSR 175
Query: 196 NGYVDDAVLLFYDMFRHD--DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
N D + + H + P+++T +++ A D+ G ++ I+K G
Sbjct: 176 N---PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSD 232
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+ + + ++ +Y++CG + AR IFD +++R WN +I + ++ L F+ ++
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQG 340
+G+ P + +L+ CS G + G
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLG 319
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 246/481 (51%), Gaps = 44/481 (9%)
Query: 47 QDPFIVAKLVDKYTLHSDSGL-EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVY 105
+ P + +LV H DS L A KVFD++ DV VI + EA +
Sbjct: 26 KSPNSIPELVK----HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAF 81
Query: 106 DEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNA-------- 157
+ C G PN +T+ V+ + R + G +H +A+K GL ++FVG+A
Sbjct: 82 KRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKL 141
Query: 158 -----------------------LVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
L+S Y K E E + +F MP+R +V+WN++I G++
Sbjct: 142 STLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFS 201
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH-CYIVKTGMKL 253
G ++AV F DM R + + P+ +T + A + A AG IH C I G +
Sbjct: 202 QTGRNEEAVNTFVDMLR-EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRF 260
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISD--RTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
+ + + LIS Y+ CG + + F+++ + R I WN++I Y +G +EA++MF++
Sbjct: 261 NVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEK 320
Query: 312 LV-DAGLRPDGVVFLCLLSACSHAGMLAQGWDLF-QTMETYGVAK--SEAHYACIVDLLG 367
+V D LRP+ V L +L AC+HAG++ +G+ F + + Y HYAC+VD+L
Sbjct: 321 MVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLS 380
Query: 368 RAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVI 427
R+G K+A E I+SMP+ PG + ALLG C+IH N LA+ A K+ LDP + YV+
Sbjct: 381 RSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVM 440
Query: 428 LAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFET 487
L+ Y WQ+ + +R+ ++E +K+ G S +E+ R F D+++ +++
Sbjct: 441 LSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRM 500
Query: 488 L 488
L
Sbjct: 501 L 501
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 152/498 (30%), Positives = 251/498 (50%), Gaps = 39/498 (7%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
+K H V G E D ++ L+ Y S +E KVFD++ RDV WN +I Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYA--SLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 94 NVGPFAEALNVYDEMRCAGTTP-NRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
G F +A+ V+ M + T L AC A + + G I+ V ++ +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSV 182
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF------ 206
+GNALV + KC ++ +R VF+ M +++ W SM+ GY + G +D+A +LF
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 207 ---------------------YDMFRHDDIGA--PDNATLVTVLPAFAQKADIHAGYWIH 243
++FR PDN LV++L AQ + G WIH
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIH 302
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
YI + + +D +G+ L+ +YA CG I A +F I +R W ++I M+G +
Sbjct: 303 GYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSG 362
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACI 362
AL ++ ++ + G+R D + F+ +L+AC+H G +A+G +F +M E + V H +C+
Sbjct: 363 RALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQPGKN---VYGALLGACRIHKNIELAEFTAEKLFVLDP 419
+DLL RAG L +A E I M + + VY +LL A R + N+++AE AEKL ++
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
Query: 420 NNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDE--S 477
+++ + +LA +Y A +W+D VR+ +++ I+K G SS+E++ +F D+ S
Sbjct: 483 SDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLS 542
Query: 478 HPYSAQIFETLQSLDRIM 495
HP +I L +M
Sbjct: 543 HPKMDEINSMLHQTTNLM 560
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 173/332 (52%), Gaps = 33/332 (9%)
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
L + +N ++K A+ F + L ++ E+R G P+ +T P VLK+ G R +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
+HG+AVK GL+ D +V N+L+ YA ++E + KVF+EMPQRD+VSWN +IS Y N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G +DA+ +F M + ++ D T+V+ L A + ++ G I+ ++V T ++
Sbjct: 126 GRFEDAIGVFKRMSQESNL-KFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVR 183
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCY-------------------- 296
+G+ L+ ++ CG + ARA+FD + D+ + W +++ Y
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 297 ------GMHGHAQ-----EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
M+G+ Q EAL +F+ + AG+RPD V + LL+ C+ G L QG +
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 346 TMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
+ V + +VD+ + G ++ A+E
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALE 335
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 217/381 (56%), Gaps = 3/381 (0%)
Query: 112 GTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEAS 171
G + + Y +++CG R + G H A+K G D+++G++LV Y EVE +
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 172 RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA 231
KVF EMP+R++VSW +MISG+ VD + L+ M P++ T +L A
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM--RKSTSDPNDYTFTALLSACT 232
Query: 232 QKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNA 291
+ G +HC + G+K ++ + LIS+Y CG + A IFD+ S++ + WN+
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 292 IIRCYGMHGHAQEALSMFQQLV-DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETY 350
+I Y HG A +A+ +F+ ++ +G +PD + +L +LS+C HAG++ +G F M +
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 351 GVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFT 410
G+ HY+C+VDLLGR G L++A+E I++MP++P ++G+LL +CR+H ++
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRA 412
Query: 411 AEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRK 470
AE+ +L+P+ A +V LA +Y G W++AA VRK +++ +K G S +E+ +
Sbjct: 413 AEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFM 472
Query: 471 FGANDESHPYSAQIFETLQSL 491
F A D S+ +I L L
Sbjct: 473 FKAEDGSNCRMLEIVHVLHCL 493
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 6/266 (2%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANV 95
H + GG D ++ + LV L+ DSG +E A KVF+++ R+V W +I G+A
Sbjct: 143 HCLALKGGFISDVYLGSSLV---VLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQE 199
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
L +Y +MR + + PN YT+ +L AC A +G ++H + GL L +
Sbjct: 200 WRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHIS 259
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N+L+S Y KC +++ + ++F++ +D+VSWNSMI+GY +G A+ LF M
Sbjct: 260 NSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGT 319
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
PD T + VL + + G + + G+K + N S L+ L G + A
Sbjct: 320 -KPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 276 AIFDRISDR-TIFVWNAIIRCYGMHG 300
+ + + + +W +++ +HG
Sbjct: 379 ELIENMPMKPNSVIWGSLLFSCRVHG 404
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 255/482 (52%), Gaps = 21/482 (4%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHS---DSGLEYARKVFDKLSARDVF 83
C T IK H+ ++ G ++ + ++KL+ + LH + YA +FD + + F
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAF-LHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 84 CWNVVIK-----GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
++ +I+ ++G L V +E P+ T+ F++ AC G
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEE--DIAPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 139 IHGHAVKCGLDL-DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
IH VK G+ L D V ++ Y + + + +RKVF+E+PQ D+V W+ +++GY G
Sbjct: 138 IHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK-TGMKLDPN 256
+ + +F +M PD ++ T L A AQ + G WIH ++ K + ++ D
Sbjct: 198 LGSEGLEVFREMLVKGL--EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 255
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DA 315
+G+ L+ +YA CG I A +F +++ R +F W A+I Y +G+A++A++ ++L +
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 315
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKK 374
G++PD VV L +L+AC+H G L +G + + ME Y + HY+CIVDL+ RAG L
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDD 375
Query: 375 AVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNA----GRYVILAQ 430
A+ I+ MP++P +V+GALL CR HKN+EL E + L L+ N V L+
Sbjct: 376 ALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSN 435
Query: 431 MYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQS 490
+Y + +A++VR I + ++K G+S +E++ KF + D SHP QI +
Sbjct: 436 IYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHL 495
Query: 491 LD 492
L
Sbjct: 496 LS 497
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 235/488 (48%), Gaps = 62/488 (12%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP-NRYTYPFVLKACG 128
AR +FD+++ R+V W +I GY G F + ++ MR G N T + KAC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 129 AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
++G IHG + L+ DLF+GN+L+S Y+K + ++ VF M +D VSWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIG-------------------------APDNATL 223
+I+G + +A LF M D + DN T
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 224 VTVLPAF-----------------------------------AQKADIHAGYWIHCYIVK 248
++ AF A AD+ G IH +VK
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
+ D ++ + L+S+Y CG + A IF IS+ I +N +I Y +G ++AL +
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLG 367
F L +G P+GV FL LLSAC H G + GW F++M+ +Y + HYAC+VDLLG
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLG 586
Query: 368 RAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVI 427
R+G L A I +MP +P V+G+LL A + H ++LAE A+KL L+P++A YV+
Sbjct: 587 RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVV 646
Query: 428 LAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFET 487
L+Q+Y G+ +D R+ + IKK G S + L+ F A DES +I T
Sbjct: 647 LSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFT 706
Query: 488 LQSLDRIM 495
L+ + + M
Sbjct: 707 LKMIRKEM 714
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 190/445 (42%), Gaps = 42/445 (9%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRY--TYPFVLKAC 127
A ++F + ++ + +I G+ G F EA +Y E TP ++ + +
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE------TPVKFRDSVASNVLLS 185
Query: 128 GAERASQKGHAI---HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV 184
G RA + A+ G AVK ++ +++V Y K + +R +F+ M +R+++
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVK-----EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHC 244
+W +MI GY G+ +D LF M + D+ N TL + A G IH
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSN-TLAVMFKACRDFVRYREGSQIHG 299
Query: 245 YIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQE 304
+ + ++ D LG+ L+S+Y+ GY+ A+A+F + ++ WN++I E
Sbjct: 300 LVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISE 359
Query: 305 ALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVD 364
A +F+++ D V + ++ S G +++ +LF M K + ++
Sbjct: 360 AYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELFGMMP----EKDNITWTAMIS 411
Query: 365 LLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGA-CRIHKNIELAEFTAEKLFVLDPN 420
G ++A+ + M + P + ++L A + IE + + + N
Sbjct: 412 AFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVN 471
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPY 480
+ L MY G DA ++ I E +I + Y+++ + FG
Sbjct: 472 DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI---VSYNTMISGYSYNGFGKK------ 522
Query: 481 SAQIFETLQSLDRIMGKEAQTLNFL 505
+ ++F L+S GKE + FL
Sbjct: 523 ALKLFSMLES----SGKEPNGVTFL 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 60/238 (25%)
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF----- 206
+F N+ +S +A+ ++ + +F +M R IVSW +MIS Y NG + A +F
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 207 -----------------------YDMFRHDDIGAPDNATLVTVLPAFAQKAD-------- 235
Y++F DI + + T++ F +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELF--CDIPEKNAVSYATMITGFVRAGRFDEAEFLY 167
Query: 236 --------------------IHAGYWIHCYIVKTGMKLDPNLG-SGLISLYANCGYISMA 274
+ AG W V GM + + S ++ Y G I A
Sbjct: 168 AETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG-LRPDGVVFLCLLSAC 331
R++FDR+++R + W A+I Y G ++ +F ++ G ++ + + AC
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/481 (31%), Positives = 255/481 (53%), Gaps = 21/481 (4%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHS---DSGLEYARKVFDKLSARDVF 83
C T IK H+ ++ G ++ + ++KL+ + LH + YA +FD + + F
Sbjct: 21 CNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAF-LHLPNLNKHFHYASSIFDSIEIPNSF 79
Query: 84 CWNVVIK-----GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
++ +I+ ++G L V +E TP+ T+ F++ AC G
Sbjct: 80 VYDTMIRICSRSSQPHLGLRYFLLMVKEEEE--DITPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 139 IHGHAVKCGLDL-DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
IH VK G+ L D V ++ Y + + + +RKVF+E+PQ D+V W+ +++GY G
Sbjct: 138 IHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT-GMKLDPN 256
+ + +F +M PD ++ T L A AQ + G WIH ++ K ++ D
Sbjct: 198 LGSEGLEVFKEMLVRGI--EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DA 315
+G+ L+ +YA CG I A +F++++ R +F W A+I Y +G+A++A + ++ +
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKK 374
G++PD VV L +L+AC+H G L +G + + ME YG+ HY+CIVDL+ RAG L
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDD 375
Query: 375 AVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNA----GRYVILAQ 430
A++ I+ MP++P +V+GALL CR HKN+EL E + L L+ N V L+
Sbjct: 376 ALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSN 435
Query: 431 MYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQS 490
+Y + +A +VR I + I+K G+S +E++ KF + D SHP QI +
Sbjct: 436 IYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHL 495
Query: 491 L 491
L
Sbjct: 496 L 496
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 251/504 (49%), Gaps = 47/504 (9%)
Query: 34 KKAHAQVVVGGHEQDP--FIVAKLVDKYTLHSDSGLEYARKVFDK--LSARDVFCWNVVI 89
K+ HA + G ++ P ++ L Y S + A+K+FD+ LS +D W ++
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYA--SSGEMVTAQKLFDEIPLSEKDNVDWTTLL 83
Query: 90 KGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLD 149
++ G ++ ++ EMR + + + C HG AVK G+
Sbjct: 84 SSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 150 LDLFVGNALVSFYAKC-------------------------------QEVEASRKVFNEM 178
+ V NAL+ Y KC + +E R+VF+EM
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
P+R+ V+W M++GY G+ + + L +M G + TL ++L A AQ ++
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL-NFVTLCSMLSACAQSGNLVV 262
Query: 239 GYWIHCYIVKTGMKL-------DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNA 291
G W+H Y +K M + D +G+ L+ +YA CG I + +F + R + WNA
Sbjct: 263 GRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNA 322
Query: 292 IIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG 351
+ MHG + + MF Q++ ++PD + F +LSACSH+G++ +GW F ++ YG
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 352 VAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTA 411
+ HYAC+VDLLGRAG +++A ++ MP+ P + V G+LLG+C +H +E+AE
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 412 EKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKF 471
+L + P N ++++ MY G+ A +R ++R+ I+K G SS+ + +F
Sbjct: 442 RELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 472 GANDESHPYSAQIFETL-QSLDRI 494
+ D SHP + +I+ L + ++RI
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERI 525
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 219/393 (55%), Gaps = 7/393 (1%)
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAER 131
VF + R++F WN++I ++ G +++++++ M R + P+ +T P +L+AC A R
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 132 ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMIS 191
++ G IH +K G LFV +ALV Y ++ +RK+F++MP RD V + +M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIG--APDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
GY G +L MFR A D+ +V++L A Q + G +H + ++
Sbjct: 209 GYVQQG----EAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
L NLG+ + +Y C + A +F +S R + W+++I YG+ G + +F
Sbjct: 265 CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 310 QQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRA 369
+++ G+ P+ V FL +LSAC+H G++ + W F+ M+ Y + HYA + D + RA
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRA 384
Query: 370 GDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILA 429
G L++A +F++ MP++P + V GA+L C+++ N+E+ E A +L L P A YV LA
Sbjct: 385 GLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLA 444
Query: 430 QMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
+Y AG++ +A +R+ ++E I K G SS+
Sbjct: 445 GLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 212/381 (55%), Gaps = 5/381 (1%)
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
F WN +++ Y +A+ VY M + P+RY+ P V+KA G +H
Sbjct: 83 FLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSV 142
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
AV+ G D F + ++ Y K E E +RKVF+E P+R + SWN++I G G ++A
Sbjct: 143 AVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEA 202
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH-CYI-VKTGMKLDPNLGSG 260
V +F DM R PD+ T+V+V + D+ + +H C + KT K D + +
Sbjct: 203 VEMFVDMKRSGL--EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNS 260
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
LI +Y CG + +A IF+ + R + W+++I Y +G+ EAL F+Q+ + G+RP+
Sbjct: 261 LIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPN 320
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFI 379
+ F+ +LSAC H G++ +G F M++ + + +HY CIVDLL R G LK+A + +
Sbjct: 321 KITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVV 380
Query: 380 QSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQ 439
+ MP++P V+G L+G C ++E+AE+ A + L+P N G YV+LA +Y G W+
Sbjct: 381 EEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWK 440
Query: 440 DAARVRKAIRENDIKKPIGYS 460
D RVRK ++ + K YS
Sbjct: 441 DVERVRKLMKTKKVAKIPAYS 461
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 157/336 (46%), Gaps = 23/336 (6%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGY 92
K+ H+ V G D F + + TL+ +G E ARKVFD+ R + WN +I G
Sbjct: 137 KELHSVAVRLGFVGDEFCESGFI---TLYCKAGEFENARKVFDENPERKLGSWNAIIGGL 193
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL-- 150
+ G EA+ ++ +M+ +G P+ +T V +CG +H KC L
Sbjct: 194 NHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLH----KCVLQAKT 249
Query: 151 ----DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF 206
D+ + N+L+ Y KC ++ + +F EM QR++VSW+SMI GY NG +A+ F
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECF 309
Query: 207 YDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLG--SGLIS 263
M + G P+ T V VL A + G + ++K+ +L+P L ++
Sbjct: 310 RQM---REFGVRPNKITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVD 365
Query: 264 LYANCGYISMARAIFDRISDR-TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
L + G + A+ + + + + + VW ++ G + A + +V+ DG
Sbjct: 366 LLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDG- 424
Query: 323 VFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
V++ L + + GM + + M+T VAK A+
Sbjct: 425 VYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAY 460
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 244/474 (51%), Gaps = 38/474 (8%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
LLH T + + HA ++ ++A + S+S +YA +VF + +V
Sbjct: 10 LLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNS--DYANRVFSHIQNPNV 67
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
+N +IK Y+ VGP E+L+ + M+ G + YTY +LK+C + + G +HG
Sbjct: 68 LVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGE 127
Query: 143 AVKCGL-------------------------------DLDLFVGNALVSFYAKCQEVEAS 171
++ G + ++ V N ++ + +VE
Sbjct: 128 LIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERG 187
Query: 172 RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA 231
+F +M +R IVSWNSMIS + G +A+ LF +M D PD AT+VTVLP A
Sbjct: 188 LHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI--DQGFDPDEATVVTVLPISA 245
Query: 232 QKADIHAGYWIHCYIVKTGMKLD-PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWN 290
+ G WIH +G+ D +G+ L+ Y G + A AIF ++ R + WN
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWN 305
Query: 291 AIIRCYGMHGHAQEALSMFQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQ-TME 348
+I ++G + + +F +++ G + P+ FL +L+ CS+ G + +G +LF ME
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME 365
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAE 408
+ + HY +VDL+ R+G + +A +F+++MP+ ++G+LL ACR H +++LAE
Sbjct: 366 RFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAE 425
Query: 409 FTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
A +L ++P N+G YV+L+ +Y + G+WQD +VR +++N ++K G S++
Sbjct: 426 VAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 248 bits (633), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 239/480 (49%), Gaps = 8/480 (1%)
Query: 14 LRDSFYYTDLLHLCKTTDSIK--KA-HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYA 70
L D++ + L C +K KA H V+V G + L YT + ++
Sbjct: 206 LSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGE--MQDG 263
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
+F+ +S RDV W +I Y +G +A+ + +MR + PN T+ + AC +
Sbjct: 264 LCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMI 190
G +H + + GL+ L V N+++ Y+ C + ++ +F M RDI+SW+++I
Sbjct: 324 SRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 191 SGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTG 250
GY G+ ++ F M + P + L ++L A I G +H + G
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGT--KPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 251 MKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQ 310
++ + + S LI++Y+ CG I A IF I A+I Y HG ++EA+ +F+
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRA 369
+ + G RPD V F+ +L+AC+H+G L G+ F M ETY + ++ HY C+VDLL RA
Sbjct: 502 KSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRA 561
Query: 370 GDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILA 429
G L A + I M + V+ LL AC+ +IE AE++ LDP A V LA
Sbjct: 562 GRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLA 621
Query: 430 QMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQ 489
+Y G ++AA VRK ++ + K G+SS++++ F + D HP S I+ L+
Sbjct: 622 NIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 7/372 (1%)
Query: 7 RLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHS 63
R+ +V D+ + +L C + +I + HA V ++ + L+D Y
Sbjct: 98 RVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMY--KR 155
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
++ + +VF ++ R+ W +I G + G + E L + EM + + YT+
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
LKAC R + G AIH H + G L V N+L + Y +C E++ +F M +RD+
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
VSW S+I Y G AV F M R+ + P+ T ++ A A + + G +H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKM-RNSQV-PPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
C ++ G+ ++ + ++ +Y+ CG + A +F + R I W+ II Y G +
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
E F + +G +P LLS + ++ G + +G+ ++ + ++
Sbjct: 394 EGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLI 453
Query: 364 DLLGRAGDLKKA 375
++ + G +K+A
Sbjct: 454 NMYSKCGSIKEA 465
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 156/325 (48%), Gaps = 4/325 (1%)
Query: 60 TLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCA--GTTPNR 117
+L + L AR+VFDK+ D+ W +IK Y EAL ++ MR +P+
Sbjct: 49 SLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDT 108
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE 177
VLKACG G ++H +AVK L ++VG++L+ Y + +++ S +VF+E
Sbjct: 109 SVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE 168
Query: 178 MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIH 237
MP R+ V+W ++I+G G + + F +M R +++ D T L A A +
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEEL--SDTYTFAIALKACAGLRQVK 226
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
G IH +++ G + + L ++Y CG + +F+ +S+R + W ++I Y
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA 357
G +A+ F ++ ++ + P+ F + SAC+ L G L + + G+ S +
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSM 382
++ + G+L A Q M
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGM 371
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/457 (30%), Positives = 235/457 (51%), Gaps = 10/457 (2%)
Query: 44 GHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPF----- 98
G E D + L+D Y + L+ A K+F + +++V +N +I G+ +
Sbjct: 282 GMEFDIVVRTALLDMYA--KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 99 AEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNAL 158
+EA ++ +M+ G P+ T+ VLKAC A + + G IH K D F+G+AL
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 159 VSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
+ YA E + F ++DI SW SMI + N ++ A LF +F P
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI--RP 457
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
+ T+ ++ A A A + +G I Y +K+G+ ++ + IS+YA G + +A +F
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLA 338
+ + + ++A+I HG A EAL++F+ + G++P+ FL +L AC H G++
Sbjct: 518 IEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVT 577
Query: 339 QGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGA 397
QG FQ M+ Y + +E H+ C+VDLLGR G L A I S Q + ALL +
Sbjct: 578 QGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Query: 398 CRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPI 457
CR++K+ + + AE+L L+P +G YV+L +Y D+G A VR+ +R+ +KK
Sbjct: 638 CRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEP 697
Query: 458 GYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRI 494
S + + + F D SHP S I+ L+++D +
Sbjct: 698 ALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETMDNV 734
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 18/308 (5%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
L +AR++FD++ R++ +N +I GY +G + +A+ ++ E R A +++TY L
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
CG G +HG V GL +F+ N L+ Y+KC +++ + +F+ +RD VSW
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA---QKADIHAGYWIH 243
NS+ISGY G ++ + L M R D + A L +VL A + I G IH
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHR-DGLNLTTYA-LGSVLKACCINLNEGFIEKGMAIH 275
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH-- 301
CY K GM+ D + + L+ +YA G + A +F + + + +NA+I +
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 302 ---AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL--------FQTMETY 350
+ EA +F + GL P F +L ACS A L G + FQ+ E
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 351 GVAKSEAH 358
G A E +
Sbjct: 396 GSALIELY 403
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 232/430 (53%), Gaps = 11/430 (2%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H V+ G E + FI + L Y ++ + AR+VFD++ DV CW V+ ++
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREP--VDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 97 PFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
+ EAL ++ M R G P+ T+ VL ACG R ++G IHG + G+ ++ V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
++L+ Y KC V +R+VFN M +++ VSW++++ GY NG + A+ +F +M D
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY 363
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
TVL A A A + G IH V+ G + + S LI LY G I A
Sbjct: 364 ------CFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
++ ++S R + WNA++ +G +EA+S F +V G++PD + F+ +L+AC H G
Sbjct: 418 RVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTG 477
Query: 336 MLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGAL 394
M+ +G + F M ++YG+ HY+C++DLLGRAG ++A ++ + +++G L
Sbjct: 478 MVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Query: 395 LGACRIHKNI-ELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
LG C + + +AE A+++ L+P YV+L+ MY+ G+ DA +RK + +
Sbjct: 538 LGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Query: 454 KKPIGYSSVE 463
K +G S ++
Sbjct: 598 AKTVGQSWID 607
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 170/369 (46%), Gaps = 9/369 (2%)
Query: 20 YTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
Y LL C S HA VV G E D + L+ Y G+ R+VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLY-FKLGPGMRETRRVFDG 122
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
+D W ++ GY +AL V+ EM G N +T +KAC + G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
HG + G + + F+ + L Y +E +R+VF+EMP+ D++ W +++S ++ N
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
++A+ LFY M R + PD +T TVL A + G IH ++ G+ +
Sbjct: 243 DLYEEALGLFYAMHRGKGL-VPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+ S L+ +Y CG + AR +F+ +S + W+A++ Y +G ++A+ +F+++ +
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAV 376
L G V L AC+ + G ++ G + + ++DL G++G + A
Sbjct: 362 LYCFGTV----LKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSAS 417
Query: 377 EFIQSMPIQ 385
M I+
Sbjct: 418 RVYSKMSIR 426
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 7/306 (2%)
Query: 95 VGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFV 154
+G EA+ + + + Y +L+ C + G H H VK GL+ D V
Sbjct: 39 LGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNV 98
Query: 155 GNALVSFYAKCQE-VEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
GN+L+S Y K + +R+VF+ +D +SW SM+SGY T A+ +F +M
Sbjct: 99 GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV--- 155
Query: 214 DIGAPDNA-TLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
G N TL + + A ++ ++ G H ++ G + + + S L LY
Sbjct: 156 SFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPV 215
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL-VDAGLRPDGVVFLCLLSAC 331
AR +FD + + + W A++ + + +EAL +F + GL PDG F +L+AC
Sbjct: 216 DARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 332 SHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVY 391
+ L QG ++ + T G+ + + ++D+ G+ G +++A + M + +
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSW 334
Query: 392 GALLGA 397
ALLG
Sbjct: 335 SALLGG 340
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 148/437 (33%), Positives = 229/437 (52%), Gaps = 37/437 (8%)
Query: 62 HSDSGL-EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
+S +GL E A ++FD+++ +D+ W +I G EAL Y EM G P+
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQE------------- 167
+L A S KG +HG VK G D F+ ++ FYA +
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 168 ------------------VEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
VE +R+VF++ +DI SWN+MISGY + A+ LF +M
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREM 428
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
+ PD T+V+V A + + G H Y+ + + + NL + +I +YA CG
Sbjct: 429 ISSSQV-KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCG 487
Query: 270 YISMARAIFDR---ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
I A IF + IS TI WNAII HGHA+ AL ++ L ++P+ + F+
Sbjct: 488 SIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVG 547
Query: 327 LLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+LSAC HAG++ G F++M++ +G+ HY C+VDLLG+AG L++A E I+ MP++
Sbjct: 548 VLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVK 607
Query: 386 PGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVR 445
++G LL A R H N+E+AE A +L +DP++ G V+L+ +Y DAG+W+D A VR
Sbjct: 608 ADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVR 667
Query: 446 KAIRENDIKKPIGYSSV 462
+ +R D++ +S V
Sbjct: 668 EEMRTRDVEWSRAFSGV 684
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 169/405 (41%), Gaps = 71/405 (17%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A K+FD + R + +IKGYA ++EA+ ++ EMR G N T V+ AC
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+ A+K L+ +FV L+ Y C ++ +RK+F+EMP+R++V+WN M
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIG-----------------------------APDN 220
++GY+ G ++ A LF + D + P
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA-------------- 266
+V +L A A+ G +H IVK G L + +I YA
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 267 -----------------NCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
G + AR +FD+ D+ IF WNA+I Y Q AL +F
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 310 QQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
++++ + ++PD + + + SA S G L +G + + ++ A I+D+ +
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAK 485
Query: 369 AGDLKKAVEF------IQSMPIQPGKNVYGALLGACRIHKNIELA 407
G ++ A+ I S I P + A++ H + +LA
Sbjct: 486 CGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLA 526
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 47/320 (14%)
Query: 80 RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAI 139
R CW + ++ P + E ++ L +C + G I
Sbjct: 9 RSRRCWVISLQARCFSAPSRTHFDFSGE-----SSDTERALVSALGSCASSNDVTCGRQI 63
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQ--------------------------EVEASR- 172
H +K GLD + ++ N++++ YAKC+ V + R
Sbjct: 64 HCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRL 123
Query: 173 ----KVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN-ATLVTVL 227
K+F+ MP+R VS+ ++I GY N +A+ LF +M ++G N TL TV+
Sbjct: 124 WDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREM---RNLGIMLNEVTLATVI 180
Query: 228 PAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF 287
A + I + +K ++ + + L+ +Y C + AR +FD + +R +
Sbjct: 181 SACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLV 240
Query: 288 VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM 347
WN ++ Y G ++A +F Q+ + D V + ++ C L + + M
Sbjct: 241 TWNVMLNGYSKAGLIEQAEELFDQITE----KDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 348 ETYGVAKSEAHYACIVDLLG 367
G+ SE +VDLL
Sbjct: 297 LRCGMKPSEVM---MVDLLS 313
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 244 bits (623), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 144/472 (30%), Positives = 243/472 (51%), Gaps = 44/472 (9%)
Query: 67 LEYARKVFDKLSAR-DVFCWNVVIKGYA-NVGPFAE--ALNVYDEMRCAGTTPNRYTYPF 122
+ YA +F + + F WN++I+ NV ++VY MR +P+ +T+PF
Sbjct: 8 IAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+L + G H + GLD D FV +L++ Y+ C ++ ++++VF++ +D
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 183 IVSWNSMISGYTTNGYVDDAVLLF---------------------------YDMFRHDDI 215
+ +WNS+++ Y G +DDA LF D+FR +
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 216 GAPDNA-------TLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC 268
P+ A T+ TVL A + + G W+H YI K +++D LG+ LI +YA C
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 269 GYISMARAIFDRI-SDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA-GLRPDGVVFLC 326
G + A+ +F+ + S + + ++A+I C M+G E +F ++ + + P+ V F+
Sbjct: 248 GSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVG 307
Query: 327 LLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
+L AC H G++ +G F+ M E +G+ S HY C+VDL GR+G +K+A FI SMP++
Sbjct: 308 ILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME 367
Query: 386 PGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVR 445
P ++G+LL R+ +I+ E ++L LDP N+G YV+L+ +Y G+W + +R
Sbjct: 368 PDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIR 427
Query: 446 KAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGK 497
+ I K G S VE+E +F DES S +I+ LD IM +
Sbjct: 428 HEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAM---LDEIMQR 476
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 170/358 (47%), Gaps = 39/358 (10%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYT----------LHSDSG----------------- 66
++ HAQ+++ G ++DPF+ L++ Y+ + DSG
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 67 --LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRC-----AGTTPNRYT 119
++ ARK+FD++ R+V W+ +I GY G + EAL+++ EM+ A PN +T
Sbjct: 142 GLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM- 178
VL ACG A ++G +H + K +++D+ +G AL+ YAKC +E +++VFN +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
++D+ ++++MI G D+ LF +M D+I P++ T V +L A + I+
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNIN-PNSVTFVGILGACVHRGLINE 320
Query: 239 G-YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRIS-DRTIFVWNAIIRCY 296
G + I + G+ ++ LY G I A + + + + +W +++
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAK 354
M G + ++L++ G ++ L + + G + + ME G+ K
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNSG-AYVLLSNVYAKTGRWMEVKCIRHEMEVKGINK 437
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 220/432 (50%), Gaps = 6/432 (1%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP-NRYTYPFVLK 125
+ Y+ +VF + + N +I+ ++ E ++ +R + P N + F LK
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS 185
C G IHG G D + L+ Y+ C+ + KVF+E+P+RD VS
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA--PDNATLVTVLPAFAQKADIHAGYWIH 243
WN + S Y N D VL+ +D ++D G PD T + L A A + G +H
Sbjct: 182 WNVLFSCYLRNKRTRD-VLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVH 240
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+I + G+ NL + L+S+Y+ CG + A +F + +R + W A+I M+G +
Sbjct: 241 DFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGK 300
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET--YGVAKSEAHYAC 361
EA+ F +++ G+ P+ LLSACSH+G++A+G F M + + + + HY C
Sbjct: 301 EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 362 IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNN 421
+VDLLGRA L KA I+SM ++P ++ LLGACR+H ++EL E L L
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEE 420
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYS 481
AG YV+L Y G+W+ +R ++E I G S++EL+ +F +D SHP
Sbjct: 421 AGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRK 480
Query: 482 AQIFETLQSLDR 493
+I++ L +++
Sbjct: 481 EEIYKMLAEINQ 492
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 222/411 (54%), Gaps = 35/411 (8%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
+N +I+ Y G + +L ++ M + PN T+P ++KA + + G A+HG A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE--------------------------- 177
K G D FV + V FY + ++E+SRK+F++
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 178 ----MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD-IGAPDNATLVTVLPAFAQ 232
MP D+VSW ++I+G++ G A+++F +M +++ + P+ AT V+VL + A
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 233 --KADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWN 290
+ I G IH Y++ + L LG+ L+ +Y G + MA IFD+I D+ + WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 291 AIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ET 349
AII +G ++AL MF+ + + + P+G+ L +L+AC+ + ++ G LF ++
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSE 353
Query: 350 YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEF 409
Y + + HY C+VDL+GRAG L A FIQS+P +P +V GALLGAC+IH+N EL
Sbjct: 354 YKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNT 413
Query: 410 TAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYS 460
++L L P + G+YV L+ W +A ++RKA+ E I+K YS
Sbjct: 414 VGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM---RCAGTTPNRYTYPFV 123
++YA + F ++ DV W VI G++ G A+AL V+ EM A TPN T+ V
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 124 LKACGA--ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
L +C + + G IHG+ + + L +G AL+ Y K ++E + +F+++ +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
+ +WN++IS +NG A+ +F +M + + P+ TL+ +L A A+ + G
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMF-EMMKSSYV-HPNGITLLAILTACARSKLVDLG 343
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 248/485 (51%), Gaps = 23/485 (4%)
Query: 19 YYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLS 78
Y ++ C + IK+ + + GH Q F+ ++L+++ + L +A ++F +
Sbjct: 5 YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64
Query: 79 ARDVFCWNVVIKGYANVGPFAEALNVYDEM------RCAGTTPNRYTYPFVLKACGAERA 132
WN +I+G+A + A + Y M A + T F LKAC
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
S +H + GL D + L+ Y+K ++ ++ K+F+EMP RD+ SWN++I+G
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 193 YTTNGYVDDAVLLFYDM----FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI-HCYIV 247
+ +A+ L+ M R ++ T+V L A + D+ G I H Y
Sbjct: 185 LVSGNRASEAMELYKRMETEGIRRSEV------TVVAALGACSHLGDVKEGENIFHGYSN 238
Query: 248 KTGMKLDPNLGSGLISLYANCGYISMARAIFDRIS-DRTIFVWNAIIRCYGMHGHAQEAL 306
+ + + I +Y+ CG++ A +F++ + +++ WN +I + +HG A AL
Sbjct: 239 DNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
+F +L D G++PD V +L L+AC HAG++ G +F M GV ++ HY C+VDLL
Sbjct: 294 EIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLL 353
Query: 367 GRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYV 426
RAG L++A + I SM + P ++ +LLGA I+ ++E+AE + ++ + NN G +V
Sbjct: 354 SRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFV 413
Query: 427 ILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFE 486
+L+ +Y G+W+D RVR + +KK G S +E + +F +D+SH +I+E
Sbjct: 414 LLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYE 473
Query: 487 TLQSL 491
+ +
Sbjct: 474 KIDEI 478
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 232/451 (51%), Gaps = 11/451 (2%)
Query: 22 DLLHLCKTTDSIKKA----HAQVVVGGHEQDPFIVAK-LVDKYTLHSDSGLEYARKVFDK 76
LL LC S K HA V+V Q+ +++ LVD Y D + VFD+
Sbjct: 153 SLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAF--HVFDQ 210
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC-GAERASQK 135
+ ++ W +I G + ++++ M+ PNR T VL AC S
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSL 270
Query: 136 GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT 195
IHG + + G D + A ++ Y +C V SR +F RD+V W+SMISGY
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAE 330
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
G + + L M R + I A ++ TL+ ++ A + +H I+K G
Sbjct: 331 TGDCSEVMNLLNQM-RKEGIEA-NSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI 388
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
LG+ LI +YA CG +S AR +F ++++ + W+++I YG+HGH EAL +F+ ++
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKG 448
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
G D + FL +LSAC+HAG++ + +F Y + + HYAC ++LLGR G + A
Sbjct: 449 GHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDA 508
Query: 376 VEFIQSMPIQPGKNVYGALLGACRIHKNIELA-EFTAEKLFVLDPNNAGRYVILAQMYED 434
E +MP++P ++ +LL AC H +++A + A +L +P+N YV+L++++ +
Sbjct: 509 FEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTE 568
Query: 435 AGQWQDAARVRKAIRENDIKKPIGYSSVELE 465
+G + A VR+ ++ + K G+S +E E
Sbjct: 569 SGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 156/348 (44%), Gaps = 15/348 (4%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYA-RKVFDKLSARDVFCWNVVIKGYANV 95
H + G + D + L+ Y S +YA RKVFD++ RD + +I
Sbjct: 70 HCLCLKAGADCDTVVSNSLISMYAKFSR---KYAVRKVFDEMLHRDTVSYCSIINSCCQD 126
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK-GHAIHGHA-VKCGLDLDLF 153
G EA+ + EM G P +L C +S K H V + +
Sbjct: 127 GLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVL 186
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
+ ALV Y K + A+ VF++M ++ VSW +MISG N + V LF M R +
Sbjct: 187 LSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQREN 246
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYW----IHCYIVKTGMKLDPNLGSGLISLYANCG 269
P+ TL++VLPA + ++ G IH + + G D L + +++Y CG
Sbjct: 247 --LRPNRVTLLSVLPACVE---LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCG 301
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
+S++R +F+ R + +W+++I Y G E +++ Q+ G+ + V L ++S
Sbjct: 302 NVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVS 361
Query: 330 ACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
AC+++ +L+ + + G ++D+ + G L A E
Sbjct: 362 ACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAARE 409
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 89 IKGYANVGPFAEALNVYD-EMRCAGTTPNRYTYPFVLKACGAERAS-QKGHAIHGHAVKC 146
+KG + + EAL +Y ++ GT P V+KAC ++ G +H +K
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF 206
G D D V N+L+S YAK A RKVF+EM RD VS+ S+I+ +G + +A+ L
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQK--ADIHAGYWIHCYI-VKTGMKLDPNLGSGLIS 263
+M+ + G + LV L A + + H + V M+ L + L+
Sbjct: 137 KEMYFY---GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 264 LYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVV 323
+Y + A +FD++ + W A+I + + + + +F+ + LRP+ V
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 324 FLCLLSAC 331
L +L AC
Sbjct: 254 LLSVLPAC 261
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 102/249 (40%), Gaps = 7/249 (2%)
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA-QKADIHAGYWIHCYIVK 248
+ G ++ + D+A+ L Y + H A L +V+ A A Q+ G +HC +K
Sbjct: 17 LKGLVSDQFYDEALRL-YKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
G D + + LIS+YA R +FD + R + +II G EA+ +
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY--ACIVDLL 366
+++ G P + LL+ C+ G ++ +F + E+ +VD+
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMY 195
Query: 367 GRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAE--FTAEKLFVLDPNNAGR 424
+ D A M ++ + + A++ C ++N E+ F A + L PN
Sbjct: 196 LKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTL 254
Query: 425 YVILAQMYE 433
+L E
Sbjct: 255 LSVLPACVE 263
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 255/489 (52%), Gaps = 17/489 (3%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHE-QDPFIVAKLVDKYTLHSDSGLEYAR 71
D T +L C + I + H + G + D F+ L+D Y+ D ++ A
Sbjct: 225 DCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFD--VDSAF 282
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAER 131
+VFD+ + R++ WN ++ G+ + + EAL ++ M + T +L+ C
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 132 ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMIS 191
+IHG ++ G + + ++L+ Y C V+ + V + M +D+VS ++MIS
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
G G D+A+ +F M P+ T++++L A + AD+ W H ++ +
Sbjct: 403 GLAHAGRSDEAISIFCHMR-----DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSL 457
Query: 252 KL-DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQ 310
+ D ++G+ ++ YA CG I MAR FD+I+++ I W II Y ++G +AL++F
Sbjct: 458 AINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFD 517
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAG 370
++ G P+ V +L LSAC+H G++ +G +F++M S HY+CIVD+L RAG
Sbjct: 518 EMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAG 577
Query: 371 DLKKAVEFIQSMP--IQPGKNVYGALLGAC--RIHKNIELAEFTAEKLFVLDPNNAGRYV 426
++ AVE I+++P ++ G + +GA+L C R K I +E AE L L+P + Y+
Sbjct: 578 EIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL-ELEPLCSSGYL 636
Query: 427 ILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFE 486
+ + + W+D A +R+ ++E ++ GYS V + ++F A D+ +++ +
Sbjct: 637 LASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELND 696
Query: 487 TLQSLDRIM 495
+QSL R M
Sbjct: 697 VVQSLHRCM 705
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 156/296 (52%), Gaps = 15/296 (5%)
Query: 61 LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYT 119
+++DS ARK+FD++S RDV W+VVI+ Y L ++ EM A T P+ T
Sbjct: 169 MYADSDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVT 228
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDL-DLFVGNALVSFYAKCQEVEASRKVFNEM 178
VLKAC G ++HG +++ G DL D+FV N+L+ Y+K +V+++ +VF+E
Sbjct: 229 VTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDET 288
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD-DIGAPDNATLVTVLPAFAQKADIH 237
R+IVSWNS+++G+ N D+A+ +F+ M + ++ +L+ V F Q
Sbjct: 289 TCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK 348
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
+ IH I++ G + + S LI Y +C + A + D ++ + + + +I
Sbjct: 349 S---IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLA 405
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA 353
G + EA+S+F + D P+ + + LL+ACS + DL + +G+A
Sbjct: 406 HAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSA------DLRTSKWAHGIA 452
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 178/416 (42%), Gaps = 42/416 (10%)
Query: 74 FDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERAS 133
FD +++RD WNV++ G + G E L + ++R G PN T V+ AC
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC--RSLW 141
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
G IHG+ ++ G V N+++ YA + A RK+F+EM +RD++SW+ +I Y
Sbjct: 142 FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSA-RKLFDEMSERDVISWSVVIRSY 200
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
+ + LF +M H+ PD T+ +VL A DI G +H + ++ G L
Sbjct: 201 VQSKEPVVGLKLFKEMV-HEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259
Query: 254 -DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
D + + LI +Y+ + A +FD + R I WN+I+ + + EAL MF +
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319
Query: 313 VDAGLRPDGVVFLCLLSACS-----------HAGMLAQGWD-----LFQTMETY------ 350
V + D V + LL C H ++ +G++ L ++ Y
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 351 ---GVAKSEAHYACIVDL------LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIH 401
G Y +V L AG +A+ M P +LL AC +
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVS 439
Query: 402 KNIELAEF----TAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
++ +++ + ++ + G ++ A Y G + A R I E +I
Sbjct: 440 ADLRTSKWAHGIAIRRSLAINDISVGTSIVDA--YAKCGAIEMARRTFDQITEKNI 493
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 34/250 (13%)
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTPNR-YTYPFVLKACGAERASQKGHAIHGHAVKCG 147
IK + G + E ++ Y E++ AG N + +P V KAC
Sbjct: 16 IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSW--------------- 60
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
LF GN++ FY KC ++ + + F+ M RD VSWN ++ G G+ ++ + F
Sbjct: 61 ----LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 116
Query: 208 DM----FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLIS 263
+ F P+ +TLV V+ A ++ G IH Y++++G ++ + ++
Sbjct: 117 KLRVWGFE------PNTSTLVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILC 168
Query: 264 LYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAGLRPDGV 322
+YA+ +S AR +FD +S+R + W+ +IR Y L +F+++V +A PD V
Sbjct: 169 MYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCV 227
Query: 323 VFLCLLSACS 332
+L AC+
Sbjct: 228 TVTSVLKACT 237
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 241 bits (615), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 228/437 (52%), Gaps = 13/437 (2%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K H G D + ++D Y + YAR+VFD ++ W+ +I GY
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYA--KSKCIIYARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 94 NVGPFAEALNVYDEM----RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLD 149
EA V+ +M A TP +L C G +H +AVK G
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 150 LDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
LDL V N ++SFYAK + + + F+E+ +D++S+NS+I+G N +++ LF++M
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM 400
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
R I PD TL+ VL A + A + G H Y V G ++ ++ + L+ +Y CG
Sbjct: 401 -RTSGI-RPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
+ +A+ +FD + R I WN ++ +G+HG +EALS+F + + G+ PD V L +LS
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 330 ACSHAGMLAQGWDLFQTMET--YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPG 387
ACSH+G++ +G LF +M + V HY C+ DLL RAG L +A +F+ MP +P
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPD 578
Query: 388 KNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKA 447
V G LL AC +KN EL ++K+ L V+L+ Y A +W+DAAR+R
Sbjct: 579 IRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMI 637
Query: 448 IRENDIKKPIGYSSVEL 464
++ + K GYS V++
Sbjct: 638 QKKRGLLKTPGYSWVDV 654
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 157/279 (56%), Gaps = 7/279 (2%)
Query: 67 LEYARKVFDKLSARDV--FCWNVVIKGYANVGPFAE-ALNVYDEMRCAGTTPNRYTYPFV 123
+E AR VFD++ + W+++I+ YA+ FAE AL++Y +M +G P +YTYPFV
Sbjct: 51 VELARHVFDEIPHPRINPIAWDLMIRAYAS-NDFAEKALDLYYKMLNSGVRPTKYTYPFV 109
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
LKAC RA G IH H D++V ALV FYAKC E+E + KVF+EMP+RD+
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDM 169
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
V+WN+MISG++ + + D + LF DM R D + +P+ +T+V + PA + + G +H
Sbjct: 170 VAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL-SPNLSTIVGMFPALGRAGALREGKAVH 228
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
Y + G D + +G++ +YA I AR +FD + W+A+I Y + +
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIK 288
Query: 304 EALSMFQQLV--DAGLRPDGVVFLCLLSACSHAGMLAQG 340
EA +F Q++ D V +L C+ G L+ G
Sbjct: 289 EAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGG 327
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 180/369 (48%), Gaps = 6/369 (1%)
Query: 18 FYYTDLLHLC---KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVF 74
+ Y +L C + D K H+ V D ++ LVD Y + LE A KVF
Sbjct: 104 YTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE--LEMAIKVF 161
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR-CAGTTPNRYTYPFVLKACGAERAS 133
D++ RD+ WN +I G++ + + ++ +MR G +PN T + A G A
Sbjct: 162 DEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGAL 221
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
++G A+HG+ + G DL V ++ YAK + + +R+VF+ +++ V+W++MI GY
Sbjct: 222 REGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGY 281
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
N + +A +F+ M +D++ + +L A+ D+ G +HCY VK G L
Sbjct: 282 VENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFIL 341
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
D + + +IS YA G + A F I + + +N++I ++ +E+ +F ++
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR 401
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
+G+RPD L +L+ACSH L G +G A + + ++D+ + G L
Sbjct: 402 TSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLD 461
Query: 374 KAVEFIQSM 382
A +M
Sbjct: 462 VAKRVFDTM 470
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 8/223 (3%)
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDL-FVGNALVSFYAKCQEVEASRKVFNEMPQR 181
+L+ C R G IH H +K L L V L YA C EVE +R VF+E+P
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 182 DI--VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
I ++W+ MI Y +N + + A+ L+Y M P T VL A A I G
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG--VRPTKYTYPFVLKACAGLRAIDDG 122
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
IH ++ + D + + L+ YA CG + MA +FD + R + WNA+I + +H
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 300 GHAQEALSMFQQL--VDAGLRPDGVVFLCLLSACSHAGMLAQG 340
+ + +F + +D GL P+ + + A AG L +G
Sbjct: 183 CCLTDVIGLFLDMRRID-GLSPNLSTIVGMFPALGRAGALREG 224
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 223 LVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN-LGSGLISLYANCGYISMARAIFDRI 281
+++L + ++ G IH +++K + L + + L LYA+C + +AR +FD I
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 282 SDRTI--FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQ 339
I W+ +IR Y + A++AL ++ +++++G+RP + +L AC+ +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 340 GWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
G + + A +VD + G+L+ A++ MP
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 229/435 (52%), Gaps = 44/435 (10%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K H V+ +E D FIV+ L+D Y+ + G ARKVF L +D+ +N +I GYA
Sbjct: 137 KMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVG--NARKVFSDLGEQDLVVFNAMISGYA 194
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
N EALN+ +M+ G P+ T+
Sbjct: 195 NNSQADEALNLVKDMKLLGIKPDVITW--------------------------------- 221
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
NAL+S ++ + E ++ M + D+VSW S+ISG N + A F M
Sbjct: 222 --NALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQM 279
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
H P++AT++T+LPA A + G IH Y V TG++ + S L+ +Y CG
Sbjct: 280 LTHGLY--PNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG 337
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
+IS A +F + +T +N++I CY HG A +A+ +F Q+ G + D + F +L+
Sbjct: 338 FISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
Query: 330 ACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGK 388
ACSHAG+ G +LF M+ Y + HYAC+VDLLGRAG L +A E I++M ++P
Sbjct: 398 ACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDL 457
Query: 389 NVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAI 448
V+GALL ACR H N+ELA A+ L L+P N+G ++L +Y +AG W+ R++K I
Sbjct: 458 FVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMI 517
Query: 449 RENDIKKPIGYSSVE 463
++ ++ +G S VE
Sbjct: 518 KKKRFRRFLGSSWVE 532
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 137/283 (48%), Gaps = 5/283 (1%)
Query: 119 TYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM 178
+Y +++A G +R +G +H H V G+ + LV+FY +C +V +RKVF+EM
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
P+RDI MI NGY +++ F +M++ D D + ++L A D
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYK--DGLKLDAFIVPSLLKASRNLLDREF 135
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGM 298
G IHC ++K + D + S LI +Y+ G + AR +F + ++ + V+NA+I Y
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
+ A EAL++ + + G++PD + + L+S SH + ++ + M G
Sbjct: 196 NSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVS 255
Query: 359 YACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGAC 398
+ I+ L +KA + + M + P LL AC
Sbjct: 256 WTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/519 (28%), Positives = 256/519 (49%), Gaps = 67/519 (12%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTL- 61
R ++++ D+ T +L C +++K + HAQ+++GG E D + + LV+ Y
Sbjct: 176 RLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC 235
Query: 62 ------------------HSDSGL----------EYARKVFDKLSARDVFCWNVVIKGYA 93
HS S L +R +FD+ S R V WN +I GY
Sbjct: 236 GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI 295
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
EAL +++EMR T + T V+ AC + G +H HA K GL D+
Sbjct: 296 ANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV 354
Query: 154 VGNALVSFYAKC----------QEVEA---------------------SRKVFNEMPQRD 182
V + L+ Y+KC EVE+ +++VF + +
Sbjct: 355 VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS 414
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
++SWNSM +G++ NG + + F+ M + D D +L +V+ A A + + G +
Sbjct: 415 LISWNSMTNGFSQNGCTVETLEYFHQMHKLD--LPTDEVSLSSVISACASISSLELGEQV 472
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
G+ D + S LI LY CG++ R +FD + WN++I Y +G
Sbjct: 473 FARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQG 532
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYAC 361
EA+ +F+++ AG+RP + F+ +L+AC++ G++ +G LF++M+ +G + H++C
Sbjct: 533 FEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSC 592
Query: 362 IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNN 421
+VDLL RAG +++A+ ++ MP +++ ++L C + + + AEK+ L+P N
Sbjct: 593 MVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPEN 652
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYS 460
+ YV L+ ++ +G W+ +A VRK +REN++ K G S
Sbjct: 653 SVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 173/396 (43%), Gaps = 84/396 (21%)
Query: 19 YYTDLLHLCKTTDS---IKKAHAQVVVGGHEQDPFIVAK-LVDKYTLHSDSGLEYARKVF 74
YY LL C + + ++ + ++ G IVA L+ Y+ G+ AR +F
Sbjct: 28 YYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGI--ARNLF 85
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
D++ R+ F WN +I+GY N G +L +D M P R Y +
Sbjct: 86 DEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM------PERDGYSW------------ 127
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
N +VS +AK E+ +R++FN MP++D+V+ NS++ GY
Sbjct: 128 ---------------------NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYI 166
Query: 195 TNGYVDDAVLLFYDM-FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
NGY ++A+ LF ++ F D I TL TVL A A+ + G IH I+ G++
Sbjct: 167 LNGYAEEALRLFKELNFSADAI------TLTTVLKACAELEALKCGKQIHAQILIGGVEC 220
Query: 254 DPNLG-------------------------------SGLISLYANCGYISMARAIFDRIS 282
D + S LIS YANCG ++ +R +FDR S
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKS 280
Query: 283 DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWD 342
+R + +WN++I Y + EAL +F ++ + R D +++AC G L G
Sbjct: 281 NRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQ 339
Query: 343 LFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEF 378
+ +G+ + ++D+ + G +A +
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 48/281 (17%)
Query: 117 RYTYPFVLKACGAERASQKGHAIHGHAVKCG-LDLDLFVGNALVSFYAKCQEVEASRKVF 175
R Y +L++C + +G +K G L + V N L+ Y++ ++ +R +F
Sbjct: 26 RRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLF 85
Query: 176 NEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKAD 235
+EMP R+ SWN+MI GY +G + L F+DM D
Sbjct: 86 DEMPDRNYFSWNTMIEGYMNSGEKGTS-LRFFDMMPERD--------------------- 123
Query: 236 IHAGY-WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
GY W + ++S +A G +S+AR +F+ + ++ + N+++
Sbjct: 124 ---GYSW-----------------NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLH 163
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAK 354
Y ++G+A+EAL +F++L D + +L AC+ L G + + GV
Sbjct: 164 GYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVEC 220
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALL 395
+ +V++ + GDL+ A ++ + +P + AL+
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALI 260
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 238 bits (606), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/514 (28%), Positives = 261/514 (50%), Gaps = 41/514 (7%)
Query: 16 DSFYYTDLLHLC-KTTD--SIKKAHAQVVVGGHE-QDPFIVAKLVDKYTLHSDSGLEYAR 71
DS +L +C + TD S K+ H+ ++ + +D + L+ Y D+ Y
Sbjct: 329 DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYW- 387
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAER 131
F +S +D+ WN ++ +A+ + LN+ + T + T +LK C +
Sbjct: 388 -AFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQ 446
Query: 132 ASQKGHAIHGHAVKCGL---DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-DIVSWN 187
K +HG++VK GL + + +GNAL+ YAKC VE + K+F + +R +VS+N
Sbjct: 447 GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYN 506
Query: 188 SMISGYTTNGYVDDAVLLFYDMFRHD-------------------DIGA----------P 218
S++SGY +G DDA +LF +M D IG P
Sbjct: 507 SLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRP 566
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
+ T++ +LP AQ A +H H YI++ G+ D L L+ +YA CG + A ++F
Sbjct: 567 NTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVF 625
Query: 279 DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLA 338
+ R + ++ A++ Y +HG +EAL ++ + ++ ++PD V +L+AC HAG++
Sbjct: 626 QSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQ 685
Query: 339 QGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGA 397
G ++ ++ T +G+ + YAC VDL+ R G L A F+ MP++P N++G LL A
Sbjct: 686 DGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRA 745
Query: 398 CRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPI 457
C + ++L A L + ++ G +V+++ MY +W+ +R +++ ++KKP
Sbjct: 746 CTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPA 805
Query: 458 GYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
G S +E++ F + D SHP IF+ + +L
Sbjct: 806 GCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNAL 839
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 163/325 (50%), Gaps = 14/325 (4%)
Query: 17 SFYYTDLLHLC-KTTDSI--KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY--AR 71
S + +L LC + DS K H+ ++ G E+D + LV Y + G + A
Sbjct: 122 SVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMY---AKFGFIFPDAY 178
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA-- 129
FD ++ +DV WN +I G++ A+A + M T PN T VL C +
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 130 -ERASQKGHAIHGHAV-KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWN 187
A + G IH + V + L +FV N+LVSFY + +E + +F M +D+VSWN
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 188 SMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIV 247
+I+GY +N A LF+++ D+ +PD+ T++++LP AQ D+ +G IH YI+
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDV-SPDSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 248 KTGMKL-DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+ L D ++G+ LIS YA G S A F +S + I WNAI+ + + L
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSAC 331
++ L++ + D V L LL C
Sbjct: 418 NLLHHLLNEAITLDSVTILSLLKFC 442
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 142/284 (50%), Gaps = 10/284 (3%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAG-TTPNRYTYPFVLK 125
++ +K+F ++ + D WN+V+ G + V E + + M A P+ T+ VL
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLP 130
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEV-EASRKVFNEMPQRDIV 184
C S G ++H + +K GL+ D VGNALVS YAK + + F+ + +D+V
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA---QKADIHAGYW 241
SWN++I+G++ N + DA F M + P+ AT+ VLP A + +G
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPT--EPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 242 IHCYIV-KTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG 300
IH Y+V ++ ++ + + L+S Y G I A ++F R+ + + WN +I Y +
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 301 HAQEALSMFQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDL 343
+A +F LV G + PD V + +L C+ LA G ++
Sbjct: 309 EWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 95 VGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFV 154
+GP + + + + GT + + V+KAC + G A+HG K G V
Sbjct: 1 MGPLRQFVQNFRLLSGFGT--DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEV 58
Query: 155 GNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD 214
++++ YAKC+ ++ +K+F +M D V WN +++G + + + F+ D
Sbjct: 59 SKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS--CGRETMRFFKAMHFAD 116
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI-SM 273
P + T VLP + D + G +H YI+K G++ D +G+ L+S+YA G+I
Sbjct: 117 EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
A FD I+D+ + WNAII + + +A F ++ P+ +L C+
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 212/389 (54%), Gaps = 8/389 (2%)
Query: 79 ARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP-NRYTYPFVLKACGAERASQKGH 137
RD+ WN VI G A+ G E+L + M G + T + A G +G
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
HG A+K +LD + N L++ Y +C+++E++ KVF + ++ SWN +IS + N
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN- 660
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL 257
A + +FR+ + P+ T V +L A Q G HC++++ G + +P +
Sbjct: 661 ---KAGREVFQLFRNLKL-EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 258 GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAG 316
+ L+ +Y++CG + +F +I WN++I +G HG ++A+ +F++L ++
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKA 375
+ P+ F+ LLSACSH+G + +G ++ ME +GV H IVD+LGRAG L++A
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 376 VEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDA 435
EFI + V+GALL AC H + +L + AE LF ++P+NA Y+ LA Y
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Query: 436 GQWQDAARVRKAIRENDIKKPIGYSSVEL 464
G W++A R+RK + +N +KK GYS +++
Sbjct: 897 GGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 170/371 (45%), Gaps = 30/371 (8%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVA--KLVDKYTLHSDSGLEYA 70
D+ ++ ++ C + + + + H V+ G+ + + ++ Y+ D+ E A
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT--EAA 345
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT-PNRYTYPFVLKACGA 129
VF++L RDV N ++ G+A G F EA + ++M+ P+ T + CG
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 130 ERASQKGHAIHGHAVKCGL-DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
S++G A+HG+ V+ + L V N+++ Y KC + +F RD+VSWNS
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNS 465
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
MIS ++ NG+ A LF ++ +T++ +L + + G +HC++ K
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK 525
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
G +L S + L +M+ R + WN++I GH E+L
Sbjct: 526 LG-----DLTSAFLRLE------TMSET-------RDLTSWNSVISGCASSGHHLESLRA 567
Query: 309 FQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYA-CIVDLL 366
FQ + G +R D + L +SA + G++ QG F + + + + ++ +
Sbjct: 568 FQAMSREGKIRHDLITLLGTISASGNLGLVLQG-RCFHGLAIKSLRELDTQLQNTLITMY 626
Query: 367 GRAGDLKKAVE 377
GR D++ AV+
Sbjct: 627 GRCKDIESAVK 637
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 139/279 (49%), Gaps = 9/279 (3%)
Query: 103 NVYDEMRCAGTTPNRYTYPF---VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALV 159
N++DE+ ++ F VL++ ++ ++H A+KCGL DL + L+
Sbjct: 70 NLFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLL 129
Query: 160 SFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPD 219
+FY + E+ +S +F+E+ ++D++ WNSMI+ NG AV LF +M + D
Sbjct: 130 TFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGN--EFD 187
Query: 220 NATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFD 279
+ TL+ A + +HC ++TG+ D +L + L++LYA +S A +F
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 280 RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQ 339
+ R I WN I+ +GH +++L F+ + +G D V F C++SACS L
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTL 307
Query: 340 GWDLFQTMETYGVAKSEAHYAC---IVDLLGRAGDLKKA 375
G L + G + EAH + I+ + + GD + A
Sbjct: 308 GESLHGLVIKSGYSP-EAHVSVGNSIISMYSKCGDTEAA 345
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 167/356 (46%), Gaps = 20/356 (5%)
Query: 30 TDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVV 88
T++ + H + G QD +KL+ T + +G L + +FD+L +DV WN +
Sbjct: 103 TETPRSVHCFALKCGLLQDLATSSKLL---TFYGRTGELVSSSCLFDELKEKDVIVWNSM 159
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGL 148
I G + A+ ++ EM G + T A + S+K +H A++ GL
Sbjct: 160 ITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL 219
Query: 149 DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYD 208
D + NAL++ YAK + + ++ VF M RDIVSWN++++ NG+ ++ F
Sbjct: 220 VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKS 279
Query: 209 MFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP--NLGSGLISLYA 266
M D T V+ A + ++ G +H ++K+G + ++G+ +IS+Y+
Sbjct: 280 MTGSGQ--EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYS 337
Query: 267 NCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL--VDAGLRPDGVVF 324
CG A +F+ + R + NAI+ + +G +EA + Q+ VD ++PD
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK-IQPDIATV 396
Query: 325 LCLLSAC-----SHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
+ + S C S G G+ + M++ + + ++D+ G+ G +A
Sbjct: 397 VSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINS----VIDMYGKCGLTTQA 448
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 131/308 (42%), Gaps = 13/308 (4%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H + E D + L+ Y D +E A KVF +S ++ WN VI +
Sbjct: 604 HGLAIKSLRELDTQLQNTLITMYGRCKD--IESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
E ++ ++ PN T+ +L A ++ G H H ++ G + FV
Sbjct: 662 AGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSA 718
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
ALV Y+ C +E KVF I +WNS+IS + +G + A+ LF ++ + ++
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEM- 777
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYI-VKTGMKLDPNLGSGLISLYANCGYISMAR 275
P+ ++ +++L A + I G + + K G+K ++ + G + A
Sbjct: 778 EPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAY 837
Query: 276 AIFDRISD-RTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
I + + VW A++ HG + + + L + + PD + L A ++
Sbjct: 838 EFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFE--MEPDNASYYISL-ANTYV 894
Query: 335 GMLAQGWD 342
G+ GW+
Sbjct: 895 GL--GGWE 900
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 211/418 (50%), Gaps = 42/418 (10%)
Query: 55 LVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT 114
++ Y SD G++ A K+F + +D+ WN +I GY G +A ++D M
Sbjct: 226 MISGYAQTSD-GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVM------ 278
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
P R D+ ++ YAK V ++ +
Sbjct: 279 PRR---------------------------------DVVTWATMIDGYAKLGFVHHAKTL 305
Query: 175 FNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA 234
F++MP RD+V++NSM++GY N Y +A+ +F DM + + PD+ TLV VLPA AQ
Sbjct: 306 FDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHL-LPDDTTLVIVLPAIAQLG 364
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
+ +H YIV+ L LG LI +Y+ CG I A +F+ I +++I WNA+I
Sbjct: 365 RLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIG 424
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVA 353
+HG + A M Q+ L+PD + F+ +L+ACSH+G++ +G F+ M + +
Sbjct: 425 GLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIE 484
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEK 413
HY C+VD+L R+G ++ A I+ MP++P ++ L AC HK E E A+
Sbjct: 485 PRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKH 544
Query: 414 LFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKF 471
L + N YV+L+ MY G W+D RVR ++E I+K G S +EL+ +F
Sbjct: 545 LILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 189/420 (45%), Gaps = 57/420 (13%)
Query: 27 CKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGL-EYARKVFDKL-------- 77
CKT+D + + H +++ G ++ + ++V + L ++AR VF +
Sbjct: 22 CKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFG 81
Query: 78 SARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGH 137
D F WN VIK +++ +AL + M G + ++++ VLKAC + G
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGM 141
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
IHG K GL DLF+ N L+ Y KC + SR++F+ MP+RD VS+NSMI GY G
Sbjct: 142 QIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCG 201
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLV---TVLPAFAQKAD------------------- 235
+ A LF D+ + L+ +++ +AQ +D
Sbjct: 202 LIVSARELF-------DLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLIS 254
Query: 236 ---IHAGYWIHCYIVKT-GM-----KLDPNLGSGLISLYANCGYISMARAIFDRISDRTI 286
+ GY H I G+ + D + +I YA G++ A+ +FD++ R +
Sbjct: 255 WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 287 FVWNAIIRCYGMHGHAQEALSMFQQL-VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
+N+++ Y + + EAL +F + ++ L PD + +L A + G L++ D
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAID--- 371
Query: 346 TMETYGVAKS----EAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIH 401
M Y V K ++D+ + G ++ A+ + + + + A++G IH
Sbjct: 372 -MHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIH 429
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 243/473 (51%), Gaps = 48/473 (10%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKG-- 91
K H ++ D ++ L+D Y L YAR VFD + A+++ WN ++ G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYI--KTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 92 YANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD 151
YA + AEAL + M G P+ T+
Sbjct: 303 YACLLKDAEALMI--RMEKEGIKPDAITW------------------------------- 329
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFY 207
N+L S YA + E + V +M ++ ++VSW ++ SG + NG +A+ +F
Sbjct: 330 ----NSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
M + + +G P+ AT+ T+L + +H+G +H + ++ + D + + L+ +Y
Sbjct: 386 KM-QEEGVG-PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGK 443
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
G + A IF I ++++ WN ++ Y M G +E ++ F +++AG+ PD + F +
Sbjct: 444 SGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSV 503
Query: 328 LSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQP 386
LS C ++G++ +GW F M + YG+ + H +C+VDLLGR+G L +A +FIQ+M ++P
Sbjct: 504 LSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKP 563
Query: 387 GKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRK 446
++GA L +C+IH+++ELAE ++L VL+P+N+ Y+++ +Y + +W+D R+R
Sbjct: 564 DATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRN 623
Query: 447 AIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEA 499
+R N ++ +S ++++ F A ++HP I+ L L M K
Sbjct: 624 LMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 193/427 (45%), Gaps = 43/427 (10%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
L +A K+FD++ RD WN ++ G + +A+ ++ EM+ +G T +L+
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQV 98
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C + +G IHG+ ++ GL+ ++ + N+L+ Y++ ++E SRKVFN M R++ SW
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 187 NSMISGYTTNGYVDDAVLLFYDM-----------------------FRHDDIGA------ 217
NS++S YT GYVDDA+ L +M D I
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 218 ----PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
P +++ ++L A A+ + G IH YI++ + D + + LI +Y GY+
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
AR +FD + + I WN+++ ++A ++ ++ G++PD + + L S +
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 334 AGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEF---IQSMPIQPGKNV 390
G + D+ M+ GVA + + I + G+ + A++ +Q + P
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 391 YGALLG--AC--RIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRK 446
LL C +H E+ F K + D A L MY +G Q A +
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA---TALVDMYGKSGDLQSAIEIFW 455
Query: 447 AIRENDI 453
I+ +
Sbjct: 456 GIKNKSL 462
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 129/239 (53%), Gaps = 3/239 (1%)
Query: 136 GHAIHGHAVKCGLD-LDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G IHG +K GLD D V +A + FY +C + + K+F+EMP+RD ++WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
+G + AV LF +M + A D +T+V +L + K G IH Y+++ G++ +
Sbjct: 66 RSGNWEKAVELFREM-QFSGAKAYD-STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESN 123
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
++ + LI +Y+ G + ++R +F+ + DR + WN+I+ Y G+ +A+ + ++
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 315 AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
GL+PD V + LLS + G+ + + M+ G+ S + + ++ + G LK
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 236/481 (49%), Gaps = 52/481 (10%)
Query: 21 TDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDK 76
T +L C +++ K HAQ + G ++ LV L+S G +E A+K FD
Sbjct: 108 TSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVG---LYSRLGYIELAKKAFDD 164
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
++ ++ WN ++ GY G EA V+D++ P + + L + G
Sbjct: 165 IAEKNTVSWNSLLHGYLESGELDEARRVFDKI------PEKDAVSWNLIISSYAKKGDMG 218
Query: 137 HA---IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
+A +K ++ +G Y C+E++ +R F+ MPQ++ VSW +MISGY
Sbjct: 219 NACSLFSAMPLKSPASWNILIGG-----YVNCREMKLARTYFDAMPQKNGVSWITMISGY 273
Query: 194 TT-------------------------------NGYVDDAVLLFYDMFRHDDIGAPDNAT 222
T NG DA+ LF M + PD T
Sbjct: 274 TKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEIT 333
Query: 223 LVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRIS 282
L +V+ A +Q + G W+ YI + G+K+D L + LI LY G + A +F ++
Sbjct: 334 LSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN 393
Query: 283 DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWD 342
+ ++A+I G++G A EA S+F +++ + P+ V F LLSA SH+G++ +G+
Sbjct: 394 KKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYK 453
Query: 343 LFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHK 402
F +M+ + + S HY +VD+LGRAG L++A E I+SMP+QP V+GALL A +H
Sbjct: 454 CFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHN 513
Query: 403 NIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
N+E E L+ + G LA +Y G+W DA VR +I+E + K +G S V
Sbjct: 514 NVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWV 573
Query: 463 E 463
E
Sbjct: 574 E 574
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 215/466 (46%), Gaps = 44/466 (9%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQ-DPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARD 81
L C + K+ HAQ+VV + +P +V + + S + + Y +++ + D
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
F W +++ + F E ++VY +M +G P+ + VL+ACG G IH
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
A+K GL ++V LV Y++ +E ++K F+++ +++ VSWNS++ GY +G +D+
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKAD--------------------IHAGYW 241
A +F D I D + ++ ++A+K D I G +
Sbjct: 189 ARRVF------DKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGY 242
Query: 242 IHCY---IVKTGMKLDPNLGS----GLISLYANCGYISMARAIFDRISDRTIFVWNAIIR 294
++C + +T P +IS Y G + A +F +S + V++A+I
Sbjct: 243 VNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIA 302
Query: 295 CYGMHGHAQEALSMFQQLVDAG--LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
CY +G ++AL +F Q+++ ++PD + ++SA S G + G + + +G+
Sbjct: 303 CYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGI 362
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAE--FT 410
+ ++DL + GD KA + ++ + + Y A++ C I+ A FT
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMIMGCGINGMATEANSLFT 421
Query: 411 A--EKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIK 454
A EK P N + L Y +G Q+ + ++++++++
Sbjct: 422 AMIEKKI---PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 223/446 (50%), Gaps = 23/446 (5%)
Query: 16 DSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY-AR 71
D + L+ LC + ++K + H +V G E F LV Y GL AR
Sbjct: 141 DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFY---GKCGLIVEAR 197
Query: 72 KVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRY-----TYPFVLKA 126
+VF+ + RD+ WN ++ Y G EA + ++ G+ NR+ T+ +L A
Sbjct: 198 RVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGL---LKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C E+ Q IH K D+ V AL++ YAK + +R+ F M R++VSW
Sbjct: 255 CRIEQGKQ----IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSW 310
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N+MI G+ NG +A+ LF M + PD T +VL + A+ + I + +
Sbjct: 311 NAMIVGFAQNGEGREAMRLFGQMLLEN--LQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
K G ++ + LIS Y+ G +S A F I + + W ++I HG A+E+L
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDL 365
MF+ ++ L+PD + FL +LSACSH G++ +G F+ M E Y + + HY C++DL
Sbjct: 429 QMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDL 487
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
LGRAG + +A + + SMP +P + A G C IH+ E ++ A+KL ++P Y
Sbjct: 488 LGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNY 547
Query: 426 VILAQMYEDAGQWQDAARVRKAIREN 451
IL+ Y G W AA +RK R N
Sbjct: 548 SILSNAYVSEGHWNQAALLRKRERRN 573
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 189/395 (47%), Gaps = 24/395 (6%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
+K+ H +V G F+ KL+ YT + + A K+FD++ R++ WN++I G
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIRE--FDDADKLFDEMPLRNIVTWNILIHGV 112
Query: 93 ----ANVGPFAEALNVY-DEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+ A Y + + + ++ +++ C + G +H VK G
Sbjct: 113 IQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQG 172
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
L+ F +LV FY KC + +R+VF + RD+V WN+++S Y NG +D+A L
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
M + D T ++L A I G IH + K + D + + L+++YA
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSA----CRIEQGKQIHAILFKVSYQFDIPVATALLNMYAK 288
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
++S AR F+ + R + WNA+I + +G +EA+ +F Q++ L+PD + F +
Sbjct: 289 SNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASV 348
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL----GRAGDLKKAVEFIQSMP 383
LS+C+ + W++ Q ++ K A + + + L R G+L +A+ S+
Sbjct: 349 LSSCAKFSAI---WEIKQ-VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR 404
Query: 384 IQPGKNVYGALLGACRIH----KNIELAEFTAEKL 414
+P + +++GA H +++++ E +KL
Sbjct: 405 -EPDLVSWTSVIGALASHGFAEESLQMFESMLQKL 438
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/495 (29%), Positives = 242/495 (48%), Gaps = 20/495 (4%)
Query: 19 YYTDLLHLC-------KTTDSIKKA-----HAQVVVGGHEQDPFIVAKLVDKYTLHSDSG 66
Y D HL K ++S A H + G D F V LV Y +
Sbjct: 22 YKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKE-- 79
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLK 125
+ ARK+FD++ +V W VI GY ++G AL+++ +M PN YT+ V K
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ--RDI 183
AC A S+ G IH GL ++ V ++LV Y KC +VE +R+VF+ M R++
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
VSW SMI+ Y N +A+ LF + L +V+ A + + G H
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+ + G + + + + L+ +YA CG +S A IF RI ++ + ++I HG +
Sbjct: 260 GLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACI 362
A+ +F ++V + P+ V L +L ACSH+G++ +G + M E YGV HY C+
Sbjct: 320 AAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV 379
Query: 363 VDLLGRAGDLKKAVEFIQSMPI--QPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
VD+LGR G + +A E +++ + + G ++GALL A R+H +E+ +++L +
Sbjct: 380 VDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ 439
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPY 480
Y+ L+ Y +G W+D+ +R ++ + K S +E + F A D S
Sbjct: 440 VTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDE 499
Query: 481 SAQIFETLQSLDRIM 495
S +I L+ L++ M
Sbjct: 500 SGEIERFLKDLEKRM 514
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 243/481 (50%), Gaps = 15/481 (3%)
Query: 3 GVSRRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKY 59
G ++ + + ++F Y+ +L LC S+ K+ H+Q + G E + LVD Y
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY 370
Query: 60 TLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYT 119
S S +E A +VF + + +V W +I G + G + + EM PN T
Sbjct: 371 MKCSASEVE-ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
Query: 120 YPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
VL+AC R ++ IH + ++ +D ++ VGN+LV YA ++V+ + V M
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Query: 180 QRDIVSWNSMISGYTTNGYVDDAV----LLFYDMFRHDDIGAPDNATLVTVLPAFAQKAD 235
+RD +++ S+++ + G + A+ ++ D R D + P + A A
Sbjct: 490 RRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPG------FISASANLGA 543
Query: 236 IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
+ G +HCY VK+G ++ + L+ +Y+ CG + A+ +F+ I+ + WN ++
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAK 354
+G ALS F+++ PD V FL LLSACS+ + G + FQ M+ Y +
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKL 414
HY +V +LGRAG L++A +++M ++P ++ LL ACR N+ L E A K
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKG 723
Query: 415 FVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGAN 474
L P++ Y++LA +Y+++G+ + A + R + E + K +G S+VE++ F +
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSE 783
Query: 475 D 475
D
Sbjct: 784 D 784
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 7/351 (1%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
K H+ ++V G + + LVD Y+ S +E A +V + +DVF W V+ G+
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSK--MEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
EA+ + EMR G PN +TY +L C A R+ G IH +K G +
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 154 VGNALVSFYAKC--QEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFR 211
VGNALV Y KC EVEASR VF M ++VSW ++I G +G+V D L +M +
Sbjct: 362 VGNALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 212 HDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
+ P+ TL VL A ++ + IH Y+++ + + +G+ L+ YA+ +
Sbjct: 421 REV--EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV 478
Query: 272 SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
A + + R + +++ + G + ALS+ + G+R D + +SA
Sbjct: 479 DYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISAS 538
Query: 332 SHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
++ G L G L G + + + +VD+ + G L+ A + + +
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI 589
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 5/296 (1%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVG 96
H V+ G ++ + L+ Y L +D G+ ARK+FD++S R VF W V+I +
Sbjct: 46 HCPVIKFGLLENLDLCNNLLSLY-LKTD-GIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGN 156
FA AL++++EM +GT PN +T+ V+++C R G +HG +K G + + VG+
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 157 ALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
+L Y+KC + + + ++F+ + D +SW MIS +A+ + +M + G
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVK---AG 220
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARA 276
P N L + + G IH I+ G+ L+ L + L+ Y+ + A
Sbjct: 221 VPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 277 IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
+ + ++ +F+W +++ + + A+EA+ F ++ GL+P+ + +LS CS
Sbjct: 281 VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 4/259 (1%)
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+L C + +S+ G IH +K GL +L + N L+S Y K + +RK+F+EM R
Sbjct: 30 ILSFCESN-SSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
+ +W MIS +T + A+ LF +M P+ T +V+ + A DI G +
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGT--HPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
H ++KTG + + +GS L LY+ CG A +F + + W +I
Sbjct: 147 HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKW 206
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
+EAL + ++V AG+ P+ F+ LL A S G L G + + G+ + +
Sbjct: 207 REALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSL 265
Query: 363 VDLLGRAGDLKKAVEFIQS 381
VD + ++ AV + S
Sbjct: 266 VDFYSQFSKMEDAVRVLNS 284
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 229 AFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV 288
+F + G IHC ++K G+ + +L + L+SLY I AR +FD +S RT+F
Sbjct: 32 SFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFA 91
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
W +I + ALS+F++++ +G P+ F ++ +C+ ++ G + ++
Sbjct: 92 WTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVI 151
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G + + + DL + G K+A E S+
Sbjct: 152 KTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL 185
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 229/427 (53%), Gaps = 12/427 (2%)
Query: 30 TDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY-ARKVFDKLSARDVFCWNVV 88
T ++ H +V G D + +V Y S +GL A K+F + D+ WNV+
Sbjct: 122 TKGLRCIHGIAIVSGLGFDQICGSAIVKAY---SKAGLIVEASKLFCSIPDPDLALWNVM 178
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGL 148
I GY G + + +N+++ M+ G PN YT + ++H +K L
Sbjct: 179 ILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINL 238
Query: 149 DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYD 208
D +VG ALV+ Y++C + ++ VFN + + D+V+ +S+I+GY+ G +A+ LF +
Sbjct: 239 DSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAE 298
Query: 209 MFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC 268
+ PD + VL + A+ +D +G +H Y+++ G++LD + S LI +Y+ C
Sbjct: 299 LRMSGK--KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKC 356
Query: 269 GYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLL 328
G + A ++F I ++ I +N++I G+HG A A F ++++ GL PD + F LL
Sbjct: 357 GLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALL 416
Query: 329 SACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM--PIQ 385
C H+G+L +G ++F+ M++ +G+ HY +V L+G AG L++A EF+ S+ PI
Sbjct: 417 CTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPID 476
Query: 386 PGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY-VILAQMYEDAGQWQDAARV 444
G + GALL C +H+N LAE AE + Y V+L+ +Y G+W + R+
Sbjct: 477 SG--ILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERL 534
Query: 445 RKAIREN 451
R I E+
Sbjct: 535 RDGISES 541
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 175/356 (49%), Gaps = 4/356 (1%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNV 87
+T + +K H+ V +DP+ +L Y L+ D L ARK+FD R VF WN
Sbjct: 19 QTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDD--LISARKLFDVFPERSVFLWNS 76
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+I+ YA F L+++ ++ + T P+ +TY + + ++ IHG A+ G
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
L D G+A+V Y+K + + K+F +P D+ WN MI GY G+ D + LF
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLF- 195
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
++ +H P+ T+V + + + + +H + +K + +G L+++Y+
Sbjct: 196 NLMQHRG-HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSR 254
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
C I+ A ++F+ IS+ + +++I Y G+ +EAL +F +L +G +PD V+ +
Sbjct: 255 CMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIV 314
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
L +C+ G ++ + G+ + ++D+ + G LK A+ +P
Sbjct: 315 LGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 238/465 (51%), Gaps = 9/465 (1%)
Query: 4 VSRRLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHS 63
V R++ + S+ + ++ C + H + G+E+ + + Y+
Sbjct: 278 VFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFE 337
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
D G A KVF+ L +D+ WN +I Y A++VY M G P+ +T+ +
Sbjct: 338 DFG--AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSL 395
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
L + + +K GL + + NAL+S Y+K ++E + +F ++++
Sbjct: 396 LATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNL 452
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
+SWN++ISG+ NG+ + + F + + PD TL T+L + + G H
Sbjct: 453 ISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTH 512
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
Y+++ G + +G+ LI++Y+ CG I + +F+++S++ + WN++I Y HG +
Sbjct: 513 AYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGE 572
Query: 304 EALSMFQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYAC 361
A++ ++ + D G + PD F +LSACSHAG++ +G ++F +M E +GV ++ H++C
Sbjct: 573 NAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC 632
Query: 362 IVDLLGRAGDLKKAVEF--IQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDP 419
+VDLLGRAG L +A I I +V+ AL AC H +++L + A+ L +
Sbjct: 633 LVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEK 692
Query: 420 NNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVEL 464
++ YV L+ +Y AG W++A R+AI K G S + L
Sbjct: 693 DDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 130/267 (48%), Gaps = 10/267 (3%)
Query: 67 LEYARKVFDKLSARD-VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
+EYA +VFDK+ RD V WN +I G G ++ ++ EM G +++ + +L
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE--MPQRDI 183
C + G +H +K G + V NAL++ Y CQ V + VF E + RD
Sbjct: 199 MCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
V++N +I G G+ D LL + + P + T V+V+ + + A G+ +H
Sbjct: 258 VTFNVVIDGLA--GFKRDESLLVFRKMLEASL-RPTDLTFVSVMGSCSCAA---MGHQVH 311
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+KTG + + + +++Y++ A +F+ + ++ + WN +I Y +
Sbjct: 312 GLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGK 371
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSA 330
A+S+++++ G++PD F LL+
Sbjct: 372 SAMSVYKRMHIIGVKPDEFTFGSLLAT 398
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 135/291 (46%), Gaps = 49/291 (16%)
Query: 86 NVVIKGYANVGPFAEALNVY-DEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
N + G G AL ++ D RC P++Y+ + R + G +H +A+
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 145 KCGLDLDLFVGNALVSFYA-------------------------------KCQEVEASRK 173
+ GL V N L+S Y K ++E + +
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 174 VFNEMPQRDIVS-WNSMISGYTTNGYVDDAVLLFYDM----FRHDDIGAPDNATLVTVLP 228
VF++MP+RD V+ WN+MI+G +GY + +V LF +M RHD G T+L
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFG------FATIL- 197
Query: 229 AFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR--ISDRTI 286
+ + G +H ++K G + ++ + LI++Y NC + A +F+ ++ R
Sbjct: 198 SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 287 FVWNAIIRCYGMHGHAQ-EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGM 336
+N +I G+ G + E+L +F+++++A LRP + F+ ++ +CS A M
Sbjct: 258 VTFNVVID--GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
+++ N ++G T +G +A+ LF D+ R + PD ++ + D G +
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTL-RPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
HCY +++G+ ++ + L+SLY G ++ + FD I + ++ W ++ G
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
+ A +F ++ + R D ++ +++ C +G +LF+ M GV + +A I
Sbjct: 140 EYAFEVFDKMPE---RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 363 VDL 365
+ +
Sbjct: 197 LSM 199
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 239/472 (50%), Gaps = 51/472 (10%)
Query: 55 LVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGT 113
++D Y + SG ++ A ++FD++ R++ WN ++K G EA+N+++ M
Sbjct: 146 MIDGY---AQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM----- 197
Query: 114 TPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRK 173
P R + G + + A C + ++ NA+++ YA+ ++ + +
Sbjct: 198 -PRRDVVSWTAMVDGLAKNGKVDEA--RRLFDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 174 VFNEMPQRDIVSWNSMISGYTTN--------------------------GYVD-----DA 202
+F MP+RD SWN+MI+G+ N GYV+ +A
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
+ +F M R + P+ T V++L A + A + G IH I K+ + + + S L+
Sbjct: 315 LNVFSKMLRDGSV-KPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 263 SLYANCGYISMARAIFDR--ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
++Y+ G + AR +FD + R + WN++I Y HGH +EA+ M+ Q+ G +P
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFI 379
V +L LL ACSHAG++ +G + F+ + + E HY C+VDL GRAG LK FI
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Query: 380 QSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQ 439
+ ++ YGA+L AC +H + +A+ +K+ ++AG YV+++ +Y G+ +
Sbjct: 494 NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKRE 553
Query: 440 DAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
+AA +R ++E +KK G S V++ + F D+SHP FE L S+
Sbjct: 554 EAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQ----FEALDSI 601
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 45/333 (13%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
ARK+FD L RDV W VI GY +G EA ++D + + N T+ ++ G
Sbjct: 65 ARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMV--SGY 119
Query: 130 ERASQKGHA------------------IHGHAVKCGLD--LDLF---------VGNALVS 160
R+ Q A I G+A +D L+LF N++V
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179
Query: 161 FYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
+ ++ + +F MP+RD+VSW +M+ G NG VD+A LF M + I
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII----- 234
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR 280
+ ++ +AQ I + + + D + +I+ + ++ A +FDR
Sbjct: 235 -SWNAMITGYAQNNRIDEAD----QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDR 289
Query: 281 ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAGLRPDGVVFLCLLSACSHAGMLAQ 339
+ ++ + W +I Y + +EAL++F +++ D ++P+ ++ +LSACS L +
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 340 GWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
G + Q + K+E + ++++ ++G+L
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 230/456 (50%), Gaps = 21/456 (4%)
Query: 7 RLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHS 63
R+Q+ ++ D F L C + K+ H VV G E PF ++ L+D Y+ +
Sbjct: 228 RMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYS--N 285
Query: 64 DSGLEYARKVF--DKLSARD-VFCWNVVIKGY----ANVGPFAEALNVYDEMRCAGTTPN 116
L YA VF +KL+ V WN ++ G+ N L +Y C +
Sbjct: 286 CGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCF----D 341
Query: 117 RYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFN 176
YT LK C + G +H V G +LD VG+ LV +A ++ + K+F+
Sbjct: 342 SYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFH 401
Query: 177 EMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVT-VLPAFAQKAD 235
+P +DI++++ +I G +G+ A LF ++ + +G + +V+ +L + A
Sbjct: 402 RLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK---LGLDADQFIVSNILKVCSSLAS 458
Query: 236 IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
+ G IH +K G + +P + L+ +Y CG I +FD + +R + W II
Sbjct: 459 LGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVG 518
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAK 354
+G +G +EA F ++++ G+ P+ V FL LLSAC H+G+L + +TM++ YG+
Sbjct: 519 FGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEP 578
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKL 414
HY C+VDLLG+AG ++A E I MP++P K ++ +LL AC HKN L AEKL
Sbjct: 579 YLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKL 638
Query: 415 FVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRE 450
P++ Y L+ Y G W ++VR+A ++
Sbjct: 639 LKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKK 674
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 173/398 (43%), Gaps = 43/398 (10%)
Query: 24 LHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYT---LHSDSGLEYARKVFDKL 77
L C + K+ A V+ G Q+ FI ++ Y L SD A KVFD++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSD-----AHKVFDEM 66
Query: 78 SARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKG 136
S R++ W ++ GY + G +A+ +Y M N + Y VLKACG Q G
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
++ K L D+ + N++V Y K + + F E+ + SWN++ISGY
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 197 GYVDDAVLLFYDMFRHD------------DIGAPDNATLVT-------VLPAFAQKADIH 237
G +D+AV LF+ M + + D G+P + VL FA +
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 238 A---------GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR---ISDRT 285
A G +HC +VK+G++ P S LI +Y+NCG + A +F + + +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 286 IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
+ VWN+++ + ++ + AL + Q+ + L D L C + L G +
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 346 TMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
+ G + +VDL G+++ A + +P
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP 404
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 33/316 (10%)
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
L+ CG +A ++G +I H +K G+ ++F+ N ++S Y + + + KVF+EM +R+I
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
V+W +M+SGYT++G + A+ L+ M ++ A + VL A DI G ++
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEE-EAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
I K ++ D L + ++ +Y G + A + F I + WN +I Y G
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 304 EALSMFQQL---------------VDA---------------GLRPDGVVFLCLLSACSH 333
EA+++F ++ VD GL DG C L ACS
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 334 AGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFI--QSMPIQPGKNVY 391
G+L G L + G+ S + ++D+ G L A + + + + V+
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 392 GALLGACRIHKNIELA 407
++L I++ E A
Sbjct: 311 NSMLSGFLINEENEAA 326
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 222/428 (51%), Gaps = 38/428 (8%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
ARKVFD++ R+V WN +I GY + G A +++E+ N T+ ++K G
Sbjct: 100 ARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGK 156
Query: 130 -----------ERASQKGHAIHGHAVKCGL------------------DLDLFVGNALVS 160
ER + + +V G+ + + FV + ++S
Sbjct: 157 RIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMS 216
Query: 161 FYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN 220
Y + +V +R +F + RD+V WN++I+GY NGY DDA+ F++M + PD
Sbjct: 217 GYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNM--QGEGYEPDA 274
Query: 221 ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR 280
T+ ++L A AQ + G +H I G++L+ + + LI +YA CG + A ++F+
Sbjct: 275 VTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFES 334
Query: 281 ISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
IS R++ N++I C +HG +EAL MF + L+PD + F+ +L+AC H G L +G
Sbjct: 335 ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEG 394
Query: 341 WDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRI 400
+F M+T V + H+ C++ LLGR+G LK+A ++ M ++P V GALLGAC++
Sbjct: 395 LKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKV 454
Query: 401 HKNIELAEFTAEKL----FVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKP 456
H + E+AE + + + + + ++ +Y +WQ A +R + + ++K
Sbjct: 455 HMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKS 514
Query: 457 IGYSSVEL 464
G SS+ L
Sbjct: 515 PGLSSLVL 522
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 160/328 (48%), Gaps = 36/328 (10%)
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK-GHAIHGHAVKC 146
+IK + + G +AL +Y +R G + P +L+AC G +H ++K
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIKF 75
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF 206
G+ D+ VG++L+S Y KC V ++RKVF+EMP+R++ +WN+MI GY +NG DAVL
Sbjct: 76 GVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNG---DAVLA- 131
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQKADIHA----------------------GYWIHC 244
+F + + T + ++ + ++ +I G +++
Sbjct: 132 SGLFEEISV-CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNN 190
Query: 245 YIVKTGMKLDPNLG-------SGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
++ K ++ S ++S Y G + ARAIF R+ R + +WN +I Y
Sbjct: 191 RKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYA 250
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA 357
+G++ +A+ F + G PD V +LSAC+ +G L G ++ + G+ ++
Sbjct: 251 QNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQF 310
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
++D+ + GDL+ A +S+ ++
Sbjct: 311 VSNALIDMYAKCGDLENATSVFESISVR 338
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/516 (28%), Positives = 247/516 (47%), Gaps = 44/516 (8%)
Query: 19 YYTDLLHLC---KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
+Y L LC +T + K HA +V G Q + LV+ Y +A +VFD
Sbjct: 5 HYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYG--KCGAASHALQVFD 62
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT-PNRYTYPFVLKACGAERASQ 134
++ RD W V+ + L+V+ + + P+ + + ++KAC +
Sbjct: 63 EMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID 122
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G +H H + D V ++LV YAKC + +++ VF+ + ++ +SW +M+SGY
Sbjct: 123 HGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYA 182
Query: 195 TNGYVDDAVLLF------------------------------YDMFRHDDIGAPDNATLV 224
+G ++A+ LF + R + + D L
Sbjct: 183 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 242
Query: 225 TVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR 284
+++ A A A AG +H ++ G + + LI +YA C + A+ IF R+ R
Sbjct: 243 SIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 285 TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
+ W ++I HG A++AL+++ +V G++P+ V F+ L+ ACSH G + +G +LF
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
Query: 345 QTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGAC----R 399
Q+M + YG+ S HY C++DLLGR+G L +A I +MP P + + ALL AC R
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Query: 400 IHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGY 459
I +A+ + DP+ Y++L+ +Y A W + R+ + E +++K G+
Sbjct: 423 GQMGIRIADHLVSSFKLKDPST---YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGH 479
Query: 460 SSVELESGHRKFGANDESHPYSAQIFETLQSLDRIM 495
SSVE+ F A + SHP IF L+ L+ M
Sbjct: 480 SSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEM 515
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 201/396 (50%), Gaps = 44/396 (11%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
AR +FD++ RD WN +I GY +V +A ++ EM PNR
Sbjct: 300 ARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM------PNR------------ 341
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
D N +VS YA VE +R F + P++ VSWNS+
Sbjct: 342 ---------------------DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSI 380
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
I+ Y N +AV LF M + PD TL ++L A ++ G +H +VKT
Sbjct: 381 IAAYEKNKDYKEAVDLFIRMNIEGE--KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRIS-DRTIFVWNAIIRCYGMHGHAQEALSM 308
+ D + + LI++Y+ CG I +R IFD + R + WNA+I Y HG+A EAL++
Sbjct: 439 VIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNL 497
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF-QTMETYGVAKSEAHYACIVDLLG 367
F + G+ P + F+ +L+AC+HAG++ + F M Y + HY+ +V++
Sbjct: 498 FGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTS 557
Query: 368 RAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVI 427
G ++A+ I SMP +P K V+GALL ACRI+ N+ LA AE + L+P ++ YV+
Sbjct: 558 GQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVL 617
Query: 428 LAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVE 463
L MY D G W +A++VR + IKK G S V+
Sbjct: 618 LYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 143/333 (42%), Gaps = 40/333 (12%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACG 128
AR +F+KL AR+ WN +I GY +A ++D M + T N +V +CG
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV--SCG 116
Query: 129 AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
R ++ + D F N ++S YAK + + + +F +MP+R+ VSW++
Sbjct: 117 GIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSA 172
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI--HCYI 246
MI+G+ NG VD AV+LF M D++ L ++ + + W+
Sbjct: 173 MITGFCQNGEVDSAVVLFRKM------PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD---------------RTIFVWNA 291
+ +G + + LI Y G + AR +FD+I D + + WN+
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNS 286
Query: 292 IIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG 351
+I+ Y G A +F Q+ D D + + ++ H + + LF M
Sbjct: 287 MIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEM---- 338
Query: 352 VAKSEAH-YACIVDLLGRAGDLKKAVEFIQSMP 383
+AH + +V G+++ A + + P
Sbjct: 339 -PNRDAHSWNMMVSGYASVGNVELARHYFEKTP 370
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 27/305 (8%)
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
S +E AR F+K + WN +I Y + EA++++ M G P+ +T
Sbjct: 355 SVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP-QR 181
+L A + G +H VK + D+ V NAL++ Y++C E+ SR++F+EM +R
Sbjct: 415 LLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKR 473
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYW 241
++++WN+MI GY +G +A+ LF M + + I P + T V+VL A A HAG
Sbjct: 474 EVITWNAMIGGYAFHGNASEALNLFGSM-KSNGI-YPSHITFVSVLNACA-----HAGLV 526
Query: 242 IHCYIVKTGM----KLDPNLG--SGLISLYANCGYISMARAIFDRI---SDRTIFVWNAI 292
M K++P + S L+++ + G A I + D+T VW A+
Sbjct: 527 DEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKT--VWGAL 584
Query: 293 I---RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET 349
+ R Y G A A +L P ++ L + + G+ + + ME+
Sbjct: 585 LDACRIYNNVGLAHVAAEAMSRLEPESSTP----YVLLYNMYADMGLWDEASQVRMNMES 640
Query: 350 YGVAK 354
+ K
Sbjct: 641 KRIKK 645
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/571 (26%), Positives = 265/571 (46%), Gaps = 78/571 (13%)
Query: 1 MRGVSRRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVD 57
M G R ++ + D F T ++ L ++ ++ H +V G++ F V+ L+
Sbjct: 109 MFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIH 168
Query: 58 KYT----------LHSDSGLEYARKV--------------FDK-LSA-------RDVFCW 85
Y+ + + S +E+ V DK LS D W
Sbjct: 169 MYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISW 228
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK 145
N +I GYA G EAL + M G + +++ VL + ++ + G +H +K
Sbjct: 229 NTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
Query: 146 CGLDLDLFVGNALVSFYAKC--------------------------------QEVEASRK 173
G + FV + +V Y KC + VEA R
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKR- 347
Query: 174 VFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQK 233
+F+ + ++++V W +M GY N D+VL F ++ PD+ +V+VL A + +
Sbjct: 348 LFDSLSEKNLVVWTAMFLGYL-NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
A + G IH + ++TG+ +D L + + +Y+ CG + A IFD +R ++NA+I
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMI 466
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGV 352
HGH ++ F+ + + G +PD + F+ LLSAC H G++ +G F++M E Y +
Sbjct: 467 AGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNI 526
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSM-PIQPGKNVYGALLGACRIHKNIELAEFTA 411
+ HY C++DL G+A L KA+E ++ + ++ + GA L AC +KN EL +
Sbjct: 527 SPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVE 586
Query: 412 EKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKF 471
EKL V++ +N RY+ +A Y +G+W + R+R +R +++ G S ++ F
Sbjct: 587 EKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMF 646
Query: 472 GANDESHPYSAQIF-------ETLQSLDRIM 495
++D SH + I+ + L +D IM
Sbjct: 647 TSSDISHYETEAIYAMLHFVTKDLSEIDEIM 677
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 128/311 (41%), Gaps = 70/311 (22%)
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
+ G H ++K G L N LV+ Y+K + +R VF+EM +R++ SWN++I+ Y
Sbjct: 5 KDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAY 64
Query: 194 T---------------------------------TNGYVDDAVLLFYDMFR--HDDIGAP 218
T+G +A+ +F +M R DDI
Sbjct: 65 VKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI- 123
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
D+ T+ T++ A+ ++ G +H +VKTG S LI +Y+ CG IF
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 279 --------DRIS--------------DRTIFV------------WNAIIRCYGMHGHAQE 304
D ++ D+ + V WN +I Y +G+ +E
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 305 ALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVD 364
AL M + + GL+ D F +L+ S L G ++ + G ++ + IVD
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVD 303
Query: 365 LLGRAGDLKKA 375
+ + G++K A
Sbjct: 304 VYCKCGNMKYA 314
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 216/428 (50%), Gaps = 6/428 (1%)
Query: 37 HAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANV 95
H VV G D +V LV Y S G L A +++ + ++ YA
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAY---SRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 325
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
G A+ + + R + +L C G ++HG+A+K GL V
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N L++ Y+K +VE +F ++ + ++SWNS+ISG +G A +F+ M +
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
PD T+ ++L +Q ++ G +H Y ++ + + + + LI +YA CG A
Sbjct: 446 -LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
++F I WN++I Y + G ALS + ++ + GL+PD + FL +LSAC+H G
Sbjct: 505 SVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGG 564
Query: 336 MLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGAL 394
+ +G F+ M + +G++ + HYA +V LLGRA +A+ I M I+P V+GAL
Sbjct: 565 FVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGAL 624
Query: 395 LGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIK 454
L AC IH+ +E+ E+ A K+F+LD N G YV+++ +Y W D RVR +++N
Sbjct: 625 LSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYD 684
Query: 455 KPIGYSSV 462
+G S +
Sbjct: 685 GYLGVSQI 692
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 165/341 (48%), Gaps = 20/341 (5%)
Query: 13 VLRDSF---YYTDLLHLCKTTDS-------IKKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
+LR S ++T + L TT S +++ + G ++ ++ L++ Y
Sbjct: 39 LLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYL-- 96
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
+ A+ +FD++ RD WN +I GY+ G +A ++ M G +P+ T
Sbjct: 97 KKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVN 156
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+L CG +G ++HG A K GL+LD V NAL+SFY+KC E+ ++ +F EM +
Sbjct: 157 LLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
VSWN+MI Y+ +G ++A+ +F +MF + +P T++ +L A +
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP--VTIINLLSAHVSHEP------L 268
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
HC +VK GM D ++ + L+ Y+ CG + A ++ +I +I+ CY G
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
A+ F + ++ D V + +L C + + G L
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 131/253 (51%), Gaps = 4/253 (1%)
Query: 80 RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA- 138
RD+ ++ ++K + + + ++ ++ + TPN +T L+A S K
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 139 -IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
+ H K GLD ++V +L++ Y K V +++ +F+EMP+RD V WN++I GY+ NG
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL 257
Y DA LF M + +P TLV +LP Q + G +H K+G++LD +
Sbjct: 131 YECDAWKLFIVMLQQG--FSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 258 GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL 317
+ LIS Y+ C + A +F + D++ WN +I Y G +EA+++F+ + + +
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 318 RPDGVVFLCLLSA 330
V + LLSA
Sbjct: 249 EISPVTIINLLSA 261
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 10/165 (6%)
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQ-----KAD 235
RD+ ++S++ + +F D+ R P++ T+ L A K
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSL--TPNHFTMSIFLQATTTSFNSFKLQ 68
Query: 236 IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
+ + ++ K+G+ + + L++LY G ++ A+ +FD + +R VWNA+I
Sbjct: 69 VEQ---VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
Y +G+ +A +F ++ G P + LL C G ++QG
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 235/466 (50%), Gaps = 39/466 (8%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
E A VF ++ R F WN++I G+A+ G L+++ EM + P+ YT+ ++ A
Sbjct: 154 FEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNA 213
Query: 127 CGAERASQK-GHAIHGHAVKCGLDLDLFVGNALVSFYAK--------------------- 164
C A+ ++ G +H +K G + N+++SFY K
Sbjct: 214 CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS 273
Query: 165 -------CQ---EVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD 214
C E E + +VF+ P+++IV+W +MI+GY NG + A+ F +M +
Sbjct: 274 WNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGV 333
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
D+ VL A + A + G IH ++ G + +G+ L++LYA CG I A
Sbjct: 334 --DSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
F I+++ + WN ++ +G+HG A +AL ++ ++ +G++PD V F+ LL+ CSH+
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 335 GMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS----MPIQPGKN 389
G++ +G +F++M + Y + H C++D+ GR G L +A + + + +
Sbjct: 452 GLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNS 511
Query: 390 VYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIR 449
+ LLGAC H + EL ++ L + +P+ +V+L+ +Y G+W++ VR+ +
Sbjct: 512 SWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMV 571
Query: 450 ENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIM 495
E +KK G S +E+ + F D SHP ++ ETL L M
Sbjct: 572 ERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEM 617
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 159/391 (40%), Gaps = 68/391 (17%)
Query: 51 IVAKLVDKYTLHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR 109
++ +L K + SG + AR+VFD + D WN ++ Y+ +G EA+ ++ ++R
Sbjct: 3 VLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 110 CAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKC---- 165
+ P+ Y++ +L C + + G I ++ G L V N+L+ Y KC
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTL 122
Query: 166 -----------------------------QEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
++ EA+ VF EMP+R +WN MISG+
Sbjct: 123 SANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHC 182
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAF-AQKADIHAGYWIHCYIVKTGMKLDP 255
G ++ + LF +M + PD T +++ A A +++ G +H ++K G
Sbjct: 183 GKLESCLSLFKEMLESE--FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAV 240
Query: 256 NLGSGLISLYANCGY-------------------------------ISMARAIFDRISDR 284
+ ++S Y G A +F ++
Sbjct: 241 EAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEK 300
Query: 285 TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
I W +I YG +G ++AL F +++ +G+ D + +L ACS +L G +
Sbjct: 301 NIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIH 360
Query: 345 QTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
+ G +V+L + GD+K+A
Sbjct: 361 GCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 125/298 (41%), Gaps = 72/298 (24%)
Query: 159 VSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
++ AK + ++R+VF+ MP+ D V+WN+M++ Y+ G +A+ LF + R D P
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL-RFSD-AKP 68
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG--------- 269
D+ + +L A ++ G I ++++G + + LI +Y C
Sbjct: 69 DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVF 128
Query: 270 ------------YISM------------ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
+ S+ A +F + R F WN +I + G +
Sbjct: 129 RDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESC 188
Query: 306 LSMFQQLVDAGLRPDGVVFLCLLSACS------------HAGMLAQGW------------ 341
LS+F++++++ +PD F L++ACS HA ML GW
Sbjct: 189 LSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLS 248
Query: 342 ---------DLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNV 390
D + +E+ V ++ + I+D + G+ +KA+E + P KN+
Sbjct: 249 FYTKLGSRDDAMRELESIEVL-TQVSWNSIIDACMKIGETEKALEVFH---LAPEKNI 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
I+ A G I+ AR +FD + + WN ++ Y G QEA+++F QL + +PD
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
F +LS C+ G + G + + G S ++D+ G+ D A + +
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 382 MPIQPGKNV-YGALLGACRIHKNIELAEFTAEKLFVLDPNN-AGRYVILAQMYEDAGQWQ 439
M V + +LL A + N E E A +FV P A + I+ + G+ +
Sbjct: 131 MCCDSRNEVTWCSLLFA---YMNAEQFE-AALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 440 DAARVRKAIRENDIK 454
+ K + E++ K
Sbjct: 187 SCLSLFKEMLESEFK 201
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 213/400 (53%), Gaps = 36/400 (9%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
L C +K+ H +++ D +V +L+ + ++ +YA VF++L +
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGET--QYASLVFNQLQSPST 83
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP-NRYTYPFVLKACGAERASQKGHAIHG 141
F WN++I+ + EAL ++ M + + +++T+PFV+KAC A + + G +HG
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
A+K G D+F N L+ Y KC + ++ RKVF++MP R IVSW +M+ G +N +D
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 202 AVLLF---------------------------YDMFRH---DDIGAPDNATLVTVLPAFA 231
A ++F + +FR DD+ P+ T+V +L A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV-KPNEFTIVNLLQAST 262
Query: 232 QKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNA 291
Q + G W+H Y K G LD LG+ LI +Y+ CG + AR +FD + +++ WN+
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 292 IIRCYGMHGHAQEALSMFQQLVD-AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ET 349
+I G+HG +EALS+F+++ + A + PD + F+ +LSAC++ G + G F M +
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 350 YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKN 389
YG++ H AC++ LL +A +++KA ++SM P N
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFN 422
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 237/467 (50%), Gaps = 15/467 (3%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLH 62
+ + + V + F Y +L CK +K+ H V G + + + L+ +L+
Sbjct: 102 KEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALL---SLY 158
Query: 63 SDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYP 121
+ G +E AR FD + RD+ WN +I GY + +++ M G P+ +T+
Sbjct: 159 ARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFG 218
Query: 122 FVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
+L+A + + +HG A+K G + +LV+ Y KC + + K+ +R
Sbjct: 219 SLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR 278
Query: 182 DIVSWNSMISGYTT-NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
D++S ++I+G++ N DA +F DM R D + ++L A + G
Sbjct: 279 DLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKT--KMDEVVVSSMLKICTTIASVTIGR 336
Query: 241 WIHCYIVKTG-MKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
IH + +K+ ++ D LG+ LI +YA G I A F+ + ++ + W ++I YG H
Sbjct: 337 QIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRH 396
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAH 358
G+ ++A+ ++ ++ ++P+ V FL LLSACSH G GW ++ TM +G+ E H
Sbjct: 397 GNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEH 456
Query: 359 YACIVDLLGRAGDLKKAVEFIQSMP--IQPGKNVYGALLGACRIHKNIELAEFTAEKLFV 416
+CI+D+L R+G L++A I+S + + +GA L ACR H N++L++ A +L
Sbjct: 457 LSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLS 516
Query: 417 LDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREN-DIKKPIGYSSV 462
++P Y+ LA +Y G W +A RK ++E+ K GYS V
Sbjct: 517 MEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 182/397 (45%), Gaps = 18/397 (4%)
Query: 20 YTDLLHLCKTTDSIKK---AHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDK 76
Y L LC + K+ H + G + + L+D Y D +++ARK+FD+
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGD--VKHARKLFDR 72
Query: 77 LSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKG 136
+S RDV W +I ++ G +AL ++ EM N++TY VLK+C ++G
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Query: 137 HAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
IHG K +L V +AL+S YA+C ++E +R F+ M +RD+VSWN+MI GYT N
Sbjct: 133 MQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTAN 192
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
D + LF M PD T ++L A + +H +K G
Sbjct: 193 ACADTSFSLFQLMLTEGK--KPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSA 250
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH-AQEALSMFQQLVDA 315
L L++ Y CG ++ A + + R + A+I + + +A +F+ ++
Sbjct: 251 LIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM 310
Query: 316 GLRPDGVVFLCLLSACS-----HAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAG 370
+ D VV +L C+ G G+ L + + VA + ++D+ ++G
Sbjct: 311 KTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNS----LIDMYAKSG 366
Query: 371 DLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELA 407
+++ AV + M + ++ + G R H N E A
Sbjct: 367 EIEDAVLAFEEMKEKDVRSWTSLIAGYGR-HGNFEKA 402
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 243/521 (46%), Gaps = 50/521 (9%)
Query: 3 GVSRRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKY 59
V +R+ + D F Y ++ C + H + V H + ++ L+ Y
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 60 TLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYT 119
++ AR++FD++S RD WN +I Y + EA + D M +G + T
Sbjct: 230 KRFGK--VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 120 YPFV-----------------------------------LKACGAERASQKGHAIHGHAV 144
+ + LKAC A + G H +
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 145 K-CGLDLDL-FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
+ C D+ V N+L++ Y++C ++ + VF ++ + +WNS+ISG+ N ++
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP-NLGSGL 261
L +M P++ TL ++LP FA+ ++ G HCYI++ D L + L
Sbjct: 408 SFLLKEMLLSG--FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
+ +YA G I A+ +FD + R + ++I YG G + AL+ F+ + +G++PD
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQ 380
V + +LSACSH+ ++ +G LF ME +G+ HY+C+VDL RAG L KA +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 381 SMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFV-LDPNNAGRYVILAQMYEDAGQWQ 439
++P +P + LL AC IH N + E+ A+KL + P + G Y++LA MY G W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 440 DAARVRKAIRENDIKKPIGYSSVELES---GHRKFGANDES 477
V+ + + ++K ++ +E +S G ND+S
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSELDGENNKPMNDDS 686
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 200/440 (45%), Gaps = 53/440 (12%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++ HA + G E D +V KLV Y+ + + L+ A+ + + WNV+I Y
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYS--AFNLLDEAQTITENSEILHPLPWNVLIGSYI 160
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
F E+++VY M G + +TYP V+KAC A G +HG +L+
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH- 212
V NAL+S Y + +V+ +R++F+ M +RD VSWN++I+ YT+ + +A L M+
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 213 -------------------DDIGAPD-------------NATLVTVLPAFAQKADIHAGY 240
+ IGA + + ++ L A + + G
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 241 WIHCYIVKT---GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
HC ++++ +D N+ + LI++Y+ C + A +F ++ ++ WN+II +
Sbjct: 341 VFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA 357
+ ++E + ++++ +G P+ + +L + G L G + Y + + ++
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG----KEFHCY-ILRRQS 454
Query: 358 HYAC------IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALL-GACRIHK-NIELAEF 409
+ C +VD+ ++G++ A SM + K Y +L+ G R+ K + LA F
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 410 TAEKLFVLDPNNAGRYVILA 429
+ P++ +L+
Sbjct: 514 KDMDRSGIKPDHVTMVAVLS 533
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYA------KCQEVEAS 171
Y+ +L C G +H H + GL+ D + LV+FY+ + Q + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 172 RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF----RHDDIGAPDNATLVTVL 227
++ + +P WN +I Y N ++V ++ M R D+ P +V+
Sbjct: 144 SEILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYP------SVI 191
Query: 228 PAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF 287
A A D G +H I + + + + + LIS+Y G + +AR +FDR+S+R
Sbjct: 192 KACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV 251
Query: 288 VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
WNAII CY EA + ++ +G+ V + + C AG
Sbjct: 252 SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 243/521 (46%), Gaps = 50/521 (9%)
Query: 3 GVSRRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKY 59
V +R+ + D F Y ++ C + H + V H + ++ L+ Y
Sbjct: 170 SVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMY 229
Query: 60 TLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYT 119
++ AR++FD++S RD WN +I Y + EA + D M +G + T
Sbjct: 230 KRFGK--VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVT 287
Query: 120 YPFV-----------------------------------LKACGAERASQKGHAIHGHAV 144
+ + LKAC A + G H +
Sbjct: 288 WNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVI 347
Query: 145 K-CGLDLDL-FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
+ C D+ V N+L++ Y++C ++ + VF ++ + +WNS+ISG+ N ++
Sbjct: 348 RSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET 407
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP-NLGSGL 261
L +M P++ TL ++LP FA+ ++ G HCYI++ D L + L
Sbjct: 408 SFLLKEMLLSG--FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSL 465
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
+ +YA G I A+ +FD + R + ++I YG G + AL+ F+ + +G++PD
Sbjct: 466 VDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDH 525
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQ 380
V + +LSACSH+ ++ +G LF ME +G+ HY+C+VDL RAG L KA +
Sbjct: 526 VTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFH 585
Query: 381 SMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFV-LDPNNAGRYVILAQMYEDAGQWQ 439
++P +P + LL AC IH N + E+ A+KL + P + G Y++LA MY G W
Sbjct: 586 TIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWS 645
Query: 440 DAARVRKAIRENDIKKPIGYSSVELES---GHRKFGANDES 477
V+ + + ++K ++ +E +S G ND+S
Sbjct: 646 KLVTVKTLLSDLGVQKAHEFALMETDSELDGENNKPMNDDS 686
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 200/440 (45%), Gaps = 53/440 (12%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++ HA + G E D +V KLV Y+ + + L+ A+ + + WNV+I Y
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYS--AFNLLDEAQTITENSEILHPLPWNVLIGSYI 160
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
F E+++VY M G + +TYP V+KAC A G +HG +L+
Sbjct: 161 RNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLY 220
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH- 212
V NAL+S Y + +V+ +R++F+ M +RD VSWN++I+ YT+ + +A L M+
Sbjct: 221 VCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSG 280
Query: 213 -------------------DDIGAPD-------------NATLVTVLPAFAQKADIHAGY 240
+ IGA + + ++ L A + + G
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 241 WIHCYIVKT---GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
HC ++++ +D N+ + LI++Y+ C + A +F ++ ++ WN+II +
Sbjct: 341 VFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA 357
+ ++E + ++++ +G P+ + +L + G L G + Y + + ++
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHG----KEFHCY-ILRRQS 454
Query: 358 HYAC------IVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALL-GACRIHK-NIELAEF 409
+ C +VD+ ++G++ A SM + K Y +L+ G R+ K + LA F
Sbjct: 455 YKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 410 TAEKLFVLDPNNAGRYVILA 429
+ P++ +L+
Sbjct: 514 KDMDRSGIKPDHVTMVAVLS 533
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYA------KCQEVEAS 171
Y+ +L C G +H H + GL+ D + LV+FY+ + Q + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 172 RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF----RHDDIGAPDNATLVTVL 227
++ + +P WN +I Y N ++V ++ M R D+ P +V+
Sbjct: 144 SEILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYP------SVI 191
Query: 228 PAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF 287
A A D G +H I + + + + + LIS+Y G + +AR +FDR+S+R
Sbjct: 192 KACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAV 251
Query: 288 VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
WNAII CY EA + ++ +G+ V + + C AG
Sbjct: 252 SWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 205/379 (54%), Gaps = 8/379 (2%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A K F++L +D +N + +GY +G +A +VY M+ G P+ T +L+ C
Sbjct: 455 ALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAF 514
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP-QRDIVSWNS 188
+G ++G +K G D + V +AL++ + KC + A+ +F++ ++ VSWN
Sbjct: 515 CSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNI 574
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
M++GY +G ++AV F M + P+ T V ++ A A+ + + G +H +++
Sbjct: 575 MMNGYLLHGQAEEAVATFRQM--KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ 632
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
G +G+ L+ +YA CG I + F IS++ I WN ++ Y HG A A+S+
Sbjct: 633 CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSL 692
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLG 367
F + + L+PD V FL +LSAC HAG++ +G +F+ M E + + HYAC+VDLLG
Sbjct: 693 FLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLG 752
Query: 368 RAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVI 427
+AG +AVE ++ M ++ V+GALL + R+H N+ L+ +L L+P N Y
Sbjct: 753 KAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY-- 810
Query: 428 LAQMYEDAGQWQDAARVRK 446
G+ + +R++K
Sbjct: 811 --SQDRRLGEVNNVSRIKK 827
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 179/363 (49%), Gaps = 20/363 (5%)
Query: 20 YTDLLHL---CKTTDSIKKAHAQVVVGG---HEQDPFIVAKLVDKYTLHSDSGLEYARKV 73
YT+LL + CK + + H ++V G H Q L++ Y+L L +R +
Sbjct: 5 YTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQ-------LINAYSLFQRQDL--SRVI 55
Query: 74 FDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERA 132
FD + V WN +I+GY G EAL + M G P++Y++ F LKAC
Sbjct: 56 FDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMD 115
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
+KG IH + GL+ D+++G ALV Y K +++ ++R+VF++M +D+V+WN+M+SG
Sbjct: 116 FKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSG 175
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
NG A+LLF+DM D+ +L ++PA ++ +H ++K G
Sbjct: 176 LAQNGCSSAALLLFHDM--RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI 233
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
SGLI +Y NC + A ++F+ + + W ++ Y +G +E L +F +
Sbjct: 234 F--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM 291
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
+ +R + V L A ++ G L +G + G+ + ++ + + G+L
Sbjct: 292 RNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGEL 351
Query: 373 KKA 375
+ A
Sbjct: 352 EIA 354
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 190/399 (47%), Gaps = 16/399 (4%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVA---KLVDKYTLHSDSGLEYARKVFDKLSARDVFC 84
+ +D + H V+ G FI A L+D Y +D L A VF+++ +D
Sbjct: 215 EKSDVCRCLHGLVIKKG-----FIFAFSSGLIDMYCNCAD--LYAAESVFEEVWRKDESS 267
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
W ++ YA+ G F E L ++D MR N+ L+A KG AIH +AV
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVL 204
+ GL D+ V +L+S Y+KC E+E + ++F + RD+VSW++MI+ Y G D+A+
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 205 LFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISL 264
LF DM R P+ TL +VL A A G IHCY +K ++ + + +IS+
Sbjct: 388 LFRDMMRIHI--KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISM 445
Query: 265 YANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVF 324
YA CG S A F+R+ + +NA+ + Y G A +A +++ + G+ PD
Sbjct: 446 YAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTM 505
Query: 325 LCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYA-CIVDLLGRAGDLKKAVEFIQSMP 383
+ +L C+ A+G ++ + +G SE H A ++++ + L A+
Sbjct: 506 VGMLQTCAFCSDYARGSCVYGQIIKHGF-DSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 384 IQPGKNVYGALLGACRIHKNIE--LAEFTAEKLFVLDPN 420
+ + ++ +H E +A F K+ PN
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPN 603
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
+H ++ +G+K P+ + LI+ Y+ ++R IFD + D + +WN++IR Y G
Sbjct: 24 VHGSLIVSGLK--PH--NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 302 AQEALSMFQQLVD-AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYA 360
+EAL F + + G+ PD F L AC+ + +G + + G+
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQ 385
+V++ +A DL A + M ++
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVK 164
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 234/499 (46%), Gaps = 45/499 (9%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
R L++ + + + +L C + + + + H +V G + + ++ + L+D Y
Sbjct: 216 RDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKC 275
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
+ +E AR + + + DV WN +I G G EAL+++ M + +T P
Sbjct: 276 RE--MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPS 333
Query: 123 VLKACGAERASQK-GHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
+L R K + H VK G V NALV YAK ++++ KVF M ++
Sbjct: 334 ILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK 393
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYW 241
D++SW ++++G T NG D+A+ LF +M R I PD +VL A A+ + G
Sbjct: 394 DVISWTALVTGNTHNGSYDEALKLFCNM-RVGGI-TPDKIVTASVLSASAELTLLEFGQQ 451
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
+H +K+G ++ + L+++Y CG + A IF+ + R + W
Sbjct: 452 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWT----------- 500
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYA 360
CL+ + G+L F +M T YG+ HYA
Sbjct: 501 ------------------------CLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYA 536
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
C++DL GR+GD K + + M ++P V+ A+L A R H NIE E A+ L L+PN
Sbjct: 537 CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPN 596
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPY 480
NA YV L+ MY AG+ +AA VR+ ++ +I K G S VE + F + D HP
Sbjct: 597 NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPR 656
Query: 481 SAQIFETLQSLDRIMGKEA 499
+I+ + + ++ KEA
Sbjct: 657 MVEIYSKVDEM-MLLIKEA 674
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 169/340 (49%), Gaps = 8/340 (2%)
Query: 46 EQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVY 105
E+D F ++ Y+ + L A K+F ++ WN +I GY G EA N++
Sbjct: 56 ERDEFTWNTMIVAYS--NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLF 113
Query: 106 DEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKC 165
EM+ G PN YT VL+ C + +G IHGH +K G DLD+ V N L++ YA+C
Sbjct: 114 WEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQC 173
Query: 166 QEVEASRKVFNEMP-QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLV 224
+ + + +F M +++ V+W SM++GY+ NG+ A+ F D+ R + + T
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN--QSNQYTFP 231
Query: 225 TVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR 284
+VL A A + G +HC IVK+G K + + S LI +YA C + ARA+ + +
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD 291
Query: 285 TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS--ACSHAGMLAQGWD 342
+ WN++I G EALSMF ++ + ++ D +L+ A S M
Sbjct: 292 DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSA 351
Query: 343 LFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
++T G A + +VD+ + G + A++ + M
Sbjct: 352 HCLIVKT-GYATYKLVNNALVDMYAKRGIMDSALKVFEGM 390
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 184/383 (48%), Gaps = 9/383 (2%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD 64
+Q + + + +L +C + + ++ H + G + D +V L+ Y
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYA--QC 173
Query: 65 SGLEYARKVFDKLSA-RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
+ A +F+ + ++ W ++ GY+ G +A+ + ++R G N+YT+P V
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 233
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI 183
L AC + A + G +H VK G +++V +AL+ YAKC+E+E++R + M D+
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA-QKADIHAGYWI 242
VSWNSMI G G + +A+ +F M H+ D+ T+ ++L FA + ++
Sbjct: 294 VSWNSMIVGCVRQGLIGEALSMFGRM--HERDMKIDDFTIPSILNCFALSRTEMKIASSA 351
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
HC IVKTG + + L+ +YA G + A +F+ + ++ + W A++ +G
Sbjct: 352 HCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSY 411
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
EAL +F + G+ PD +V +LSA + +L G + G S + +
Sbjct: 412 DEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSL 471
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQ 385
V + + G L+ A SM I+
Sbjct: 472 VTMYTKCGSLEDANVIFNSMEIR 494
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 218/403 (54%), Gaps = 16/403 (3%)
Query: 70 ARKVFDKL-SARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG 128
ARKVFD++ + D ++ ++ GY V A AL+++ MR + N T L A
Sbjct: 179 ARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAIS 238
Query: 129 AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
+ H +K GLDLDL + AL+ Y K + ++R++F+ ++D+V+WN
Sbjct: 239 DLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNC 298
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
MI Y G +++ V L M +++ + P+++T V +L + A G + + +
Sbjct: 299 MIDQYAKTGLLEECVWLLRQM-KYEKM-KPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE 356
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSM 308
+ LD LG+ L+ +YA G + A IF+R+ D+ + W A+I YG HG A+EA+++
Sbjct: 357 ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTL 416
Query: 309 FQQLVDAG--LRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDL 365
F ++ + +RP+ + FL +L+ACSH G++ +G F+ M E Y HY C+VDL
Sbjct: 417 FNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDL 476
Query: 366 LGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRY 425
LGRAG L++A E I+++PI + ALL ACR++ N +L E +L + +
Sbjct: 477 LGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADA 536
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDI---KKPIGYSSVELE 465
++LA + AG + + +N++ +K GYS++E+E
Sbjct: 537 ILLAGTHAVAGNPEKSL-------DNELNKGRKEAGYSAIEIE 572
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 188/360 (52%), Gaps = 6/360 (1%)
Query: 24 LHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVF 83
L C+ T + + H +V G ++D F V+KL+ S + YA +F+ +S ++F
Sbjct: 35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLL---AFSSVLDIRYASSIFEHVSNTNLF 91
Query: 84 CWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHA 143
+N +I+GY+ A +V++++R G T +R+++ LK+C E G +HG A
Sbjct: 92 MFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIA 151
Query: 144 VKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-DIVSWNSMISGYTTNGYVDDA 202
++ G + + NAL+ FY C ++ +RKVF+EMPQ D V+++++++GY A
Sbjct: 152 LRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
+ LF M + + + + +TL++ L A + D+ H +K G+ LD +L + LI
Sbjct: 212 LDLFRIMRKSEVV--VNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALI 269
Query: 263 SLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
+Y G IS AR IFD + + WN +I Y G +E + + +Q+ ++P+
Sbjct: 270 GMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSS 329
Query: 323 VFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
F+ LLS+C+++ G + +E +A +VD+ + G L+KAVE M
Sbjct: 330 TFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 12/289 (4%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
+ AH + G + D ++ L+ Y G+ AR++FD +DV WN +I YA
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMY--GKTGGISSARRIFDCAIRKDVVTWNCMIDQYA 304
Query: 94 NVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
G E + + +M+ PN T+ +L +C A+ G + + + LD
Sbjct: 305 KTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI 364
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
+G ALV YAK +E + ++FN M +D+ SW +MISGY +G +AV LF M +
Sbjct: 365 LGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEEN 424
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI-VKTGMKLDPNLG--SGLISLYANCGY 270
P+ T + VL A + + G I C+ + P + ++ L G
Sbjct: 425 CKVRPNEITFLVVLNACSHGGLVMEG--IRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQ 482
Query: 271 ISMARAIFDRI---SDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+ A + + SD T W A++ ++G+A S+ +L + G
Sbjct: 483 LEEAYELIRNLPITSDST--AWRALLAACRVYGNADLGESVMMRLAEMG 529
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 184/337 (54%), Gaps = 5/337 (1%)
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N ++ K E ++KV +++++WN MI GY N ++A+ +M DI
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
P+ + + L A A+ D+H W+H ++ +G++L+ L S L+ +YA CG I +R
Sbjct: 162 -KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 276 AIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
+F + + +WNA+I + HG A EA+ +F ++ + PD + FL LL+ CSH G
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 336 MLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGAL 394
+L +G + F M + + HY +VDLLGRAG +K+A E I+SMPI+P ++ +L
Sbjct: 281 LLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 395 LGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIK 454
L + R +KN EL E + L +G YV+L+ +Y +W+ A +VR+ + + I+
Sbjct: 341 LSSSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 455 KPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
K G S +E +F A D SH + I++ L+ L
Sbjct: 398 KAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGL 434
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 48/273 (17%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRC-AGTTPNRYTYPF 122
+SGL A+KV S ++V WN++I GY + EAL M PN++++
Sbjct: 113 ESGL--AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
L AC +H + G++L+ + +ALV YAKC ++ SR+VF + + D
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND 230
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
+ WN+MI+G+ T+G +A+ +F +M + +PD+ T +
Sbjct: 231 VSIWNAMITGFATHGLATEAIRVFSEM--EAEHVSPDSITFL------------------ 270
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR-----TIFVWNAIIRCYG 297
GL++ ++CG + + F +S R + + A++ G
Sbjct: 271 -----------------GLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLG 313
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSA 330
G +EA + + + + PD V++ LLS+
Sbjct: 314 RAGRVKEAYELIESM---PIEPDVVIWRSLLSS 343
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 221/434 (50%), Gaps = 9/434 (2%)
Query: 34 KKAHAQVVVGG-HEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
K+ H+ VV G + + F+ LVD Y+ D L + + F+ + +DV WN ++
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGD--LSGSMRSFNAVPEKDVISWNSIVSVC 290
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD- 151
A+ G ++L+++ +M+ G P+ + L C Q G IH + +K G D+
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFR 211
L V +AL+ Y KC +E S ++ +P ++ NS+++ G D + +F M
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMI- 409
Query: 212 HDDIGAPDNATLVTVLPAFAQK--ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
D+ D TL TVL A + +H+ +HC +K+G D + LI Y G
Sbjct: 410 -DEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSG 468
Query: 270 YISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
++R +FD + IF +II Y +G + + M +++ L PD V L +LS
Sbjct: 469 QNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLS 528
Query: 330 ACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGK 388
CSH+G++ +G +F ++E+ YG++ YAC+VDLLGRAG ++KA +
Sbjct: 529 GCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADC 588
Query: 389 NVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAI 448
+ +LL +CRIH+N + AE L L+P N Y+ +++ Y + G ++ + ++R+
Sbjct: 589 VAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIA 648
Query: 449 RENDIKKPIGYSSV 462
++ + IGYSSV
Sbjct: 649 ASRELMREIGYSSV 662
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 148/300 (49%), Gaps = 6/300 (2%)
Query: 35 KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYAN 94
+ H +V+ G + F+ + LV Y ++ A K+FD++ R++ N++++ +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLR--LVDVALKLFDEMLDRNLAVCNLLLRCFCQ 190
Query: 95 VGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL-DLF 153
G VY M G N TY ++++ C +R +G +H VK G ++ ++F
Sbjct: 191 TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIF 250
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
V N LV +Y+ C ++ S + FN +P++D++SWNS++S G V D++ LF M
Sbjct: 251 VANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG 310
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP-NLGSGLISLYANCGYIS 272
P ++ L ++ +DI +G IHCY++K G + ++ S LI +Y C I
Sbjct: 311 K--RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIE 368
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
+ ++ + + N+++ G ++ + MF ++D G D V +L A S
Sbjct: 369 NSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 153/317 (48%), Gaps = 6/317 (1%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
A + FD++S RDV +N++I G + G A+ +Y EM G + T+P VL C
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSD 124
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
E ++G +H + G ++FV +ALV YA + V+ + K+F+EM R++ N +
Sbjct: 125 ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLL 184
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA-TLVTVLPAFAQKADIHAGYWIHCYIVK 248
+ + G ++ LF R + G N T ++ + ++ G +H +VK
Sbjct: 185 LRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 249 TGMKL-DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALS 307
+G + + + + L+ Y+ CG +S + F+ + ++ + WN+I+ +G ++L
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 308 MFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY-ACIVDLL 366
+F ++ G RP F+ L+ CS + G + + G S H + ++D+
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 367 GRAGDLKKAVEFIQSMP 383
G+ ++ + QS+P
Sbjct: 362 GKCNGIENSALLYQSLP 378
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 5/216 (2%)
Query: 170 ASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA-TLVTVLP 228
++ + F+EM RD+V++N +ISG + G A+ L+ +M G ++A T +VL
Sbjct: 64 SAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMV---SCGLRESASTFPSVLS 120
Query: 229 AFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV 288
+ + G +HC ++ G + + S L+ LYA + +A +FD + DR + V
Sbjct: 121 VCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAV 180
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
N ++RC+ G ++ ++ ++ G+ +G+ + ++ CSH ++ +G L +
Sbjct: 181 CNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVV 240
Query: 349 TYGVAKSEAHYA-CIVDLLGRAGDLKKAVEFIQSMP 383
G S A +VD GDL ++ ++P
Sbjct: 241 KSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP 276
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 226/435 (51%), Gaps = 27/435 (6%)
Query: 86 NVVIKGYANVG-PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ-KGHAIHGHA 143
N +K Y G P L+ R + + + ++ F +K A++AS G IH
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 144 VKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-DIVSWNSMISGYTTNGYVDDA 202
K G + + + +LV FY+ +V+ +R+VF+E P++ +IV W +MIS YT N +A
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL--DPNLGSG 260
+ LF M + D + L A A + G I+ +K +L D L +
Sbjct: 152 IELFKRM--EAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNS 209
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV------D 314
L+++Y G AR +FD + + + ++I Y ++G AQE+L +F+++ D
Sbjct: 210 LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQD 269
Query: 315 AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLK 373
+ P+ V F+ +L ACSH+G++ +G F++M Y + EAH+ C+VDL R+G LK
Sbjct: 270 TVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLK 329
Query: 374 KAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYE 433
A EFI MPI+P ++ LLGAC +H N+EL E ++F LD ++ G YV L+ +Y
Sbjct: 330 DAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYA 389
Query: 434 DAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGA---NDESHPYSAQIFETLQ- 489
G W + +++R +R+ ++ G S +EL S +F + N++ +I E L+
Sbjct: 390 SKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRC 446
Query: 490 ------SLDRIMGKE 498
S D ++GK+
Sbjct: 447 LVSCMTSFDCVIGKK 461
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 11/279 (3%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSAR-DVFCWNVVIKGY 92
++ HA V G I LV Y+ D ++YAR+VFD+ + ++ W +I Y
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGD--VDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG--LDL 150
EA+ ++ M + L AC A Q G I+ ++K L +
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMF 210
DL + N+L++ Y K E E +RK+F+E ++D+ ++ SMI GY NG +++ LF M
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 211 ----RHDDIGAPDNATLVTVLPAFAQKADIHAG-YWIHCYIVKTGMKLDPNLGSGLISLY 265
D + P++ T + VL A + + G I+ +K ++ L+
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 266 ANCGYISMARAIFDRISDR-TIFVWNAIIRCYGMHGHAQ 303
G++ A +++ + +W ++ +HG+ +
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 233/487 (47%), Gaps = 49/487 (10%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFD 75
+S +L C + + H + G E + ++ LV Y+ + L A ++F+
Sbjct: 131 NSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL--AARMFE 188
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR-CAGTTPNRYTYPFVLKACGAERASQ 134
K+ + V +N I G G +V++ MR + PN T+ + AC + Q
Sbjct: 189 KVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQ 248
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP-QRDIVSWNSMISGY 193
G +HG +K + VG AL+ Y+KC+ +++ VF E+ R+++SWNS+ISG
Sbjct: 249 YGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGM 308
Query: 194 TTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGY------------ 240
NG + AV LF + D G PD+AT +++ F+Q + +
Sbjct: 309 MINGQHETAVELFEKL---DSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
Query: 241 ----------------W-------IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAI 277
W IH +++K + D + + LI +Y CG S AR I
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI 425
Query: 278 FDRISDRT---IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
FDR + +F WN +I YG HG + A+ +F+ L + + P F +LSACSH
Sbjct: 426 FDRFEPKPKDPVF-WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHC 484
Query: 335 GMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGA 393
G + +G +F+ M E YG S H C++DLLGR+G L++A E I M +VY +
Sbjct: 485 GNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEP-SSSVYSS 543
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDI 453
LLG+CR H + L E A KL L+P N +VIL+ +Y +W+D +R+ I + +
Sbjct: 544 LLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQL 603
Query: 454 KKPIGYS 460
K G S
Sbjct: 604 VKLPGLS 610
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 183/386 (47%), Gaps = 22/386 (5%)
Query: 16 DSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
+ F + LL C + + HAQVV G D F LV Y + A K
Sbjct: 30 NKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYM--KVKQVTDALK 87
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
V D++ R + N + G G +A ++ + R +G+ N T VL CG
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGD--- 144
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
+ G +H A+K G +++++VG +LVS Y++C E + ++F ++P + +V++N+ ISG
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
NG V + V +++ R P++ T V + A A ++ G +H ++K +
Sbjct: 205 LMENG-VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQ 263
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISD-RTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
+ +G+ LI +Y+ C A +F + D R + WN++I ++G + A+ +F++
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGD 371
L GL+PD + L+S S G + + + F+ M + + S C+ LL D
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPS---LKCLTSLLSACSD 380
Query: 372 LKKAVEFIQSMPIQPGKNVYGALLGA 397
+ ++ GK ++G ++ A
Sbjct: 381 I---------WTLKNGKEIHGHVIKA 397
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 129/257 (50%), Gaps = 14/257 (5%)
Query: 114 TPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRK 173
+PN++T+P +LK+C +G +H VK G +D+F ALVS Y K ++V + K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 174 VFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQK 233
V +EMP+R I S N+ +SG NG+ DA +F D G+ N+ VTV
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVS---GSGMNS--VTVASVLGGC 142
Query: 234 ADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAII 293
DI G +HC +K+G +++ +G+ L+S+Y+ CG +A +F+++ +++ +NA I
Sbjct: 143 GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI 202
Query: 294 RCYGMHGHAQEALSMFQQLVD-AGLRPDGVVFLCLLSACSHAGMLAQGWDL--------F 344
+G S+F + + P+ V F+ ++AC+ L G L F
Sbjct: 203 SGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF 262
Query: 345 QTMETYGVAKSEAHYAC 361
Q G A + + C
Sbjct: 263 QFETMVGTALIDMYSKC 279
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 238/459 (51%), Gaps = 29/459 (6%)
Query: 28 KTTDSIKKAHAQVVVGG-HEQDPF--IVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFC 84
KT K+ HAQ+V+ G H+ F ++ K + S S L + VF + D F
Sbjct: 19 KTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLL-VFPRFGHPDKFL 77
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTP--NRYTYPFVLKACGAERAS---QKGHAI 139
+N ++K +++ ++ + N T+ FVL AC +S + G +
Sbjct: 78 FNTLLK----CSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIV 133
Query: 140 HGHAVKCG-LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT--- 195
HG K G L +G L+ FYAK ++ +RKVF+EMP+R V+WN+MI GY +
Sbjct: 134 HGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKD 193
Query: 196 --NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM-- 251
N A++LF P + T+V VL A +Q + G +H YI K G
Sbjct: 194 KGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTP 253
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
++D +G+ L+ +Y+ CG ++ A ++F+ + + +F W ++ ++G E ++ +
Sbjct: 254 EVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNR 313
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAG 370
+ ++G++P+ + F LLSA H G++ +G +LF++M+T +GV HY CIVDLLG+AG
Sbjct: 314 MAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAG 373
Query: 371 DLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVL---DPNNAGR--- 424
+++A +FI +MPI+P + +L AC I+ + E + L + D +G
Sbjct: 374 RIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECE 433
Query: 425 -YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSV 462
YV L+ + G+W + ++RK ++E IK GYS V
Sbjct: 434 DYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 242/512 (47%), Gaps = 75/512 (14%)
Query: 46 EQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVY 105
E++ +V Y + D + A ++F ++ R++ W +I G+A + EAL ++
Sbjct: 228 EKNVVTWTSMVYGYCRYGD--VREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLF 285
Query: 106 DEMR--CAGTTPNRYTYPFVLKACGAERASQK--GHAIHGHAVKCG---LDLDLFVGNAL 158
EM+ +PN T + ACG + G +H + G +D D + +L
Sbjct: 286 LEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSL 345
Query: 159 VSFYAKCQEVEASRKVFNE-------------------------MPQR-----DIVSWNS 188
V YA + +++ + NE + +R D VSW S
Sbjct: 346 VHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTS 405
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIG-----------------------------APD 219
MI GY G V A LF + D + P
Sbjct: 406 MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 220 NATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL--GSGLISLYANCGYISMARAI 277
N+T +L + +++ G IHC I KT DP+L + L+S+YA CG I A I
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Query: 278 FDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
F ++ + WN++I HG A +AL++F++++D+G +P+ V FL +LSACSH+G++
Sbjct: 526 FAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLI 585
Query: 338 AQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLG 396
+G +LF+ M ETY + HY ++DLLGRAG LK+A EFI ++P P VYGALLG
Sbjct: 586 TRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLG 645
Query: 397 ACRIH---KNIE-LAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREND 452
C ++ K+ E +AE A +L LDP NA +V L +Y G+ +RK +
Sbjct: 646 LCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKG 705
Query: 453 IKKPIGYSSVELESGHRKFGANDESHPYSAQI 484
+KK G S V + F + D+S +AQ+
Sbjct: 706 VKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 185/422 (43%), Gaps = 34/422 (8%)
Query: 45 HEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNV 104
E +V+ V L D E A ++FD++ R+V WN ++ G G +A V
Sbjct: 132 REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQV 191
Query: 105 YDEMRCAGTTPNR--YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFY 162
+D M P+R ++ ++K ++ + G + ++ ++V Y
Sbjct: 192 FDAM------PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS----EKNVVTWTSMVYGY 241
Query: 163 AKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNAT 222
+ +V + ++F EMP+R+IVSW +MISG+ N +A++LF +M + D +P+ T
Sbjct: 242 CRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 223 LVTVLPAFAQKAD--IHAGYWIHCYIVKTGMKL---DPNLGSGLISLYANCGYISMARAI 277
L+++ A G +H ++ G + D L L+ +YA+ G I+ A+++
Sbjct: 302 LISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 278 FDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
+ D + N II Y +G + A ++F+++ D V + ++ AG +
Sbjct: 362 LNESFD--LQSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDV 416
Query: 338 AQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGAL 394
++ + LFQ + K + ++ L + +A + M ++P + Y L
Sbjct: 417 SRAFGLFQKLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVL 472
Query: 395 LGACRIHKNIELAE----FTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRE 450
L + N++ + A+ DP+ + L MY G +DA + + +
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNS-LVSMYAKCGAIEDAYEIFAKMVQ 531
Query: 451 ND 452
D
Sbjct: 532 KD 533
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 145/369 (39%), Gaps = 96/369 (26%)
Query: 63 SDSGLEYARKVFDKLSARD----VFCWNVVIKGYANVGPFAEALNVYDEM---------- 108
S+ GL +AR + DK+ R V W ++ YA G EA +++ M
Sbjct: 54 SEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNA 113
Query: 109 ------RCAGTT----------PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
+C N ++ +L A + S+ + + ++
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMP----ERNV 169
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
N LV+ + ++E +++VF+ MP RD+VSWN+MI GY N +++A LLF DM
Sbjct: 170 VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK 229
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
+ + T +++ + + D+ Y + C
Sbjct: 230 NVV------TWTSMVYGYCRYGDVREAYRLFC---------------------------- 255
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL---VDAGLRPDGVVFLCLLS 329
+ +R I W A+I + + +EAL +F ++ VDA + P+G + L
Sbjct: 256 -------EMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDA-VSPNGETLISLAY 307
Query: 330 ACS-------------HAGMLAQGWDLFQTMETYG-VAKSEAHYACIVDLLGRAGDLKKA 375
AC HA +++ GW +T++ G +AKS H L+ A L
Sbjct: 308 ACGGLGVEFRRLGEQLHAQVISNGW---ETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 376 VEFIQSMPI 384
+QS I
Sbjct: 365 SFDLQSCNI 373
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 227/466 (48%), Gaps = 30/466 (6%)
Query: 7 RLQQISVLR-DSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
R+ + + R D + + ++ +C ++ H V+ G ++D + VD Y
Sbjct: 99 RMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKC 158
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
D L ARKVF ++ R+ W ++ Y G EA +++D M P R
Sbjct: 159 KD--LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM------PER----- 205
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSF------YAKCQEVEASRKVFN 176
G+ A G G V D ++S+ YAK ++ ++R +F
Sbjct: 206 ---NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFE 262
Query: 177 EMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI 236
E D+ +W+++I GY NG ++A +F +M + PD +V ++ A +Q
Sbjct: 263 EARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV--KPDEFIMVGLMSACSQMGCF 320
Query: 237 HAGYWIHCYIVKTGMKLDPN-LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
+ Y+ + K + + LI + A CG++ A +F+ + R + + +++
Sbjct: 321 ELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEG 380
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAK 354
+HG EA+ +F+++VD G+ PD V F +L C + ++ +G F+ M + Y +
Sbjct: 381 MAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILA 440
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKL 414
S HY+CIV+LL R G LK+A E I+SMP + + +G+LLG C +H N E+AE A L
Sbjct: 441 SPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHL 500
Query: 415 FVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYS 460
F L+P +AG YV+L+ +Y +W D A +R + EN I K G S
Sbjct: 501 FELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRS 546
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 201/386 (52%), Gaps = 24/386 (6%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDV 82
L LCK+ + + HA+++ G EQD +++ + + S S L Y+ VF+++ +
Sbjct: 16 LFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSS-LSYSSSVFERVPSPGT 74
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
+ WN +IKGY+N F E +++ M R P+ YT+P V+K C + G ++HG
Sbjct: 75 YLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHG 134
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
++ G D D+ VG + V FY KC+++ ++RKVF EMP+R+ VSW +++ Y +G +++
Sbjct: 135 LVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEE 194
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM-KLDPNLGSG 260
A +F D+ ++G+ + LV L + +G ++ + M K D +
Sbjct: 195 AKSMF-DLMPERNLGSWN--ALVDGL--------VKSGDLVNAKKLFDEMPKRDIISYTS 243
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
+I YA G + AR +F+ + W+A+I Y +G EA +F ++ ++PD
Sbjct: 244 MIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTMETY---GVAKSEAHYA--CIVDLLGRAGDLKKA 375
+ + L+SACS G ++L + +++Y + K +HY ++D+ + G + +A
Sbjct: 304 EFIMVGLMSACSQMGC----FELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRA 359
Query: 376 VEFIQSMPIQPGKNVYGALLGACRIH 401
+ + MP Q Y +++ IH
Sbjct: 360 AKLFEEMP-QRDLVSYCSMMEGMAIH 384
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 229/457 (50%), Gaps = 22/457 (4%)
Query: 16 DSFYYTDLLHLCKT---TDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
S +T +L C ++ ++ HA ++ G E L+D Y+ + L + +
Sbjct: 83 SSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGH--LVDSVR 140
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
VF+ + +D+ WN ++ G+ G EAL V+ M + +T V+K C + +
Sbjct: 141 VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKI 200
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP-QRDIVSWNSMIS 191
Q+G +H V G DL + +G A++SFY+ + + KV+N + D V NS+IS
Sbjct: 201 LQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLIS 259
Query: 192 GYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM 251
G N +A LL M R P+ L + L + +D+ G IHC ++ G
Sbjct: 260 GCIRNRNYKEAFLL---MSRQR----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGF 312
Query: 252 KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQ 311
D L +GL+ +Y CG I AR IF I +++ W ++I Y ++G +AL +F++
Sbjct: 313 VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFRE 372
Query: 312 LVD--AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGR 368
+ + +G+ P+ V FL ++SAC+HAG++ +G + F M E Y + HY C +D+L +
Sbjct: 373 MCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSK 432
Query: 369 AGDLKKAVEFIQSMPIQPGKN----VYGALLGACRIHKNIELAEFTAEKLF-VLDPNNAG 423
AG+ ++ ++ M ++ ++ A+L AC ++ ++ E+ A +L P NA
Sbjct: 433 AGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENAS 492
Query: 424 RYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYS 460
YV+++ Y G+W +R ++ + K G+S
Sbjct: 493 IYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 144/317 (45%), Gaps = 11/317 (3%)
Query: 69 YARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG 128
+A +FD+L RD+ N + + G + L ++ ++ A + +T+ VL AC
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 129 AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS 188
+ G +H +K G + AL+ Y+K + S +VF + ++D+VSWN+
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 189 MISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
++SG+ NG +A+ +F M+R TL +V+ A + G +H +V
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERV--EISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 249 TGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRT--IFVWNAIIRCYGMHGHAQEAL 306
TG L LG+ +IS Y++ G I+ A +++ ++ T + + + I C + + L
Sbjct: 214 TGRDLVV-LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFL 272
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
M +Q RP+ V L+ CS L G + G ++D+
Sbjct: 273 LMSRQ------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 367 GRAGDLKKAVEFIQSMP 383
G+ G + +A +++P
Sbjct: 327 GKCGQIVQARTIFRAIP 343
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 220/450 (48%), Gaps = 8/450 (1%)
Query: 47 QDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYD 106
QD +++ Y S ++ A ++F ++ ++ +N ++ G+ G +AL ++
Sbjct: 349 QDAVTFTEMITAYM--SFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 107 EMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQ 166
+M G ++ + ACG + IHG +K G + + AL+ +C+
Sbjct: 407 DMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 167 EVEASRKVFNEMPQR--DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLV 224
+ + ++F++ P + S+I GY NG D AV LF+ + D +L
Sbjct: 467 RMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFL-DEVSLT 525
Query: 225 TVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR 284
+L GY IHCY +K G D +LG+ LIS+YA C A IF+ + +
Sbjct: 526 LILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREH 585
Query: 285 TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC--SHAGMLAQGWD 342
+ WN++I CY + + EAL+++ ++ + ++PD + ++SA + + L+ D
Sbjct: 586 DVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRD 645
Query: 343 LFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIH 401
LF +M+T Y + + HY V +LG G L++A + I SMP+QP +V ALL +CRIH
Sbjct: 646 LFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIH 705
Query: 402 KNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSS 461
N +A+ A+ + P Y++ + +Y +G W + +R+ +RE +K S
Sbjct: 706 SNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSW 765
Query: 462 VELESGHRKFGANDESHPYSAQIFETLQSL 491
+ E+ F A D SHP I+ L+ L
Sbjct: 766 IIHENKIHSFHARDTSHPQEKDIYRGLEIL 795
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 153/336 (45%), Gaps = 19/336 (5%)
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAG-TTPNRYTYPFVLKACGAER 131
VF LS+ V + +I G++ + EAL V+ MR AG PN YT+ +L AC
Sbjct: 136 VFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVS 195
Query: 132 ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAK-----CQEVEASRKVFNEMPQRDIVSW 186
G IHG VK G +FV N+L+S Y K C +V K+F+E+PQRD+ SW
Sbjct: 196 RFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV---LKLFDEIPQRDVASW 252
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N+++S G A LFY+M R + G D+ TL T+L + + + G +H
Sbjct: 253 NTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV-DSFTLSTLLSSCTDSSVLLRGRELHGRA 311
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
++ G+ + ++ + LI Y+ + ++++ + + + +I Y G A+
Sbjct: 312 IRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAV 371
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
+F + + + + + L++ G + LF M GV ++ VD
Sbjct: 372 EIFANVTEK----NTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC 427
Query: 367 GRAGDLKKAVEFIQSMPIQPGKN----VYGALLGAC 398
G + KK E I I+ G + ALL C
Sbjct: 428 GLVSE-KKVSEQIHGFCIKFGTAFNPCIQTALLDMC 462
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 33/342 (9%)
Query: 35 KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYAN 94
+ H +V G F+ L+ Y S S + K+FD++ RDV WN V+
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 95 VGPFAEALNVYDEM-RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF 153
G +A +++ EM R G + +T +L +C +G +HG A++ GL +L
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
V NAL+ FY+K +++ ++ M +D V++ MI+ Y + G VD AV +F ++ +
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 214 DI-------GAPDNA----------------------TLVTVLPAFAQKADIHAGYWIHC 244
I G N +L + + A ++ IH
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 245 YIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR--TIFVWNAIIRCYGMHGHA 302
+ +K G +P + + L+ + C ++ A +FD+ + +II Y +G
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLP 501
Query: 303 QEALSMFQQ-LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
+A+S+F + L + L D V +L+ C G G+ +
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%), Gaps = 10/238 (4%)
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
+GNAL+S Y K + VF + +VS+ ++ISG++ +A+ +F+ M R
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRM-RKA 174
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY-----ANC 268
+ P+ T V +L A + + G IH IVK+G + + L+SLY ++C
Sbjct: 175 GLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC 234
Query: 269 GYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA-GLRPDGVVFLCL 327
+ +FD I R + WN ++ G + +A +F ++ G D L
Sbjct: 235 DDV---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
LS+C+ + +L +G +L G+ + + ++ + D+KK + M Q
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ 349
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 222/466 (47%), Gaps = 41/466 (8%)
Query: 35 KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYAN 94
+ HA+++ G+ D +L+ + DS Y ++ + ++C N V K Y
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDS--SYTVSIYRSIG--KLYCANPVFKAYLV 95
Query: 95 VGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFV 154
+AL Y ++ G P+ YT+ ++ G HG A+K G D L V
Sbjct: 96 SSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPV 155
Query: 155 GNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA------------ 202
N+L+ Y C ++ ++K+F E+P+RDIVSWNS+I+G NG V A
Sbjct: 156 QNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNI 215
Query: 203 -------------------VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
+ LF +M R G + +TLV +L A + A + G +H
Sbjct: 216 ISWNIMISAYLGANNPGVSISLFREMVRAGFQG--NESTLVLLLNACGRSARLKEGRSVH 273
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+++T + + + LI +Y C + +AR IFD +S R WN +I + +HG +
Sbjct: 274 ASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPE 333
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACI 362
L +F+ +++ LRPD V F+ +L C+ AG+++QG + M + + + + H C+
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 363 VDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDP 419
+L AG ++A E ++++P + P + LL + R N L E A+ L DP
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 420 NNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELE 465
N Y +L +Y G+W+D RVR+ ++E I + G V+L+
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 231/480 (48%), Gaps = 8/480 (1%)
Query: 16 DSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
+ F T + C + I K+ H + G F+ LV Y+L S +G A +
Sbjct: 135 NEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG--EAIR 192
Query: 73 VFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERA 132
V D L D+ ++ + GY G F E L+V + N TY L+ R
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 133 SQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISG 192
+H V+ G + ++ AL++ Y KC +V +++VF++ ++I +++
Sbjct: 253 LNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDA 312
Query: 193 YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
Y + ++A+ LF M + P+ T +L + A+ + + G +H ++K+G +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKE--VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
+G+ L+++YA G I AR F ++ R I WN +I HG +EAL F ++
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF-QTMETYGVAKSEAHYACIVDLLGRAGD 371
+ G P+ + F+ +L ACSH G + QG F Q M+ + V HY CIV LL +AG
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 372 LKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQM 431
K A +F+++ PI+ + LL AC + +N L + AE PN++G YV+L+ +
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNI 550
Query: 432 YEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSL 491
+ + +W+ A+VR + +KK G S + + + F A D HP I+ ++ +
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 176/388 (45%), Gaps = 12/388 (3%)
Query: 21 TDLLHLCKTTDSIK---KAHAQVVVGGHE---QDPFIVAKLVDKYTLHSDSGLEYARKVF 74
+LL +C + ++ HA ++V +D + + L++ Y ++ ARK+F
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRET--VRARKLF 92
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT-PNRYTYPFVLKACGAERAS 133
D + R+V W ++KGY N G E L ++ M +G + PN + V K+C
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
++G HG +K GL FV N LV Y+ C + +V +++P D+ ++S +SGY
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 194 TTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
G + + + D + +N T ++ L F+ D++ +H +V+ G
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVW--NNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+ LI++Y CG + A+ +FD + IF+ I+ Y +EAL++F ++
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
+ P+ F LL++ + +L QG L + G +V++ ++G ++
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 374 KAVEFIQSMPIQPGKNVYGALLGACRIH 401
A + M + + ++ C H
Sbjct: 391 DARKAFSGMTFRDIV-TWNTMISGCSHH 417
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 228/470 (48%), Gaps = 8/470 (1%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIV-AKLVDKYTLHSDSG 66
+Q+ + F ++ L L ++ H + G + +V ++D Y
Sbjct: 127 MQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMY--RRLGV 184
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
+YA VF + RDV WN +I ++ G AL+ + MR P+ YT V+
Sbjct: 185 FDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSI 244
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C R KG +K G + V A + ++KC ++ S K+F E+ + D V
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
NSMI Y+ + +DA+ LF + PD T +VL + H G +H +
Sbjct: 305 NSMIGSYSWHCCGEDALRLF--ILAMTQSVRPDKFTFSSVLSSMNAVMLDH-GADVHSLV 361
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+K G LD + + L+ +Y G + +A +F + + + WN +I + A E+L
Sbjct: 362 IKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESL 421
Query: 307 SMFQQLV-DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME-TYGVAKSEAHYACIVD 364
++F QL+ + L+PD V + +L AC +AG + +G +F +ME +GV HYACI++
Sbjct: 422 AIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIE 481
Query: 365 LLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR 424
LL R G + +A + +P +P +++ +L A + LAE A+ + +P ++
Sbjct: 482 LLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFP 541
Query: 425 YVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGAN 474
Y++L ++YE +W+++ ++R A+ E+ +K G S + +ES F A+
Sbjct: 542 YLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEAD 591
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 9/318 (2%)
Query: 61 LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
L + L A +FD++ RDV WN +I G + G + V+ +M+ P +T+
Sbjct: 80 LFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF 139
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLD-LDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
+ R G IHG+A+ G+ +L V N+++ Y + + + VF M
Sbjct: 140 SILASLVTCVR---HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTME 196
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
RD+VSWN +I + +G + A+ F+ + R +I PD T+ V+ + ++ G
Sbjct: 197 DRDVVSWNCLILSCSDSGNKEVALDQFW-LMREMEI-QPDEYTVSMVVSICSDLRELSKG 254
Query: 240 YWIHCYIVKTGMKLDP-NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGM 298
+K G + LG+G I +++ C + + +F + + N++I Y
Sbjct: 255 KQALALCIKMGFLSNSIVLGAG-IDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSW 313
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
H ++AL +F + +RPD F +LS+ +A ML G D+ + G A
Sbjct: 314 HCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAV 372
Query: 359 YACIVDLLGRAGDLKKAV 376
++++ + G + A+
Sbjct: 373 ATSLMEMYFKTGSVDLAM 390
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 14/214 (6%)
Query: 174 VFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM----FRHDDIGAPDNATLVTVLPA 229
+F+EMP+RD+VSWN+MISG + G+ + + +F+DM R + A+LVT
Sbjct: 92 LFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTC--- 148
Query: 230 FAQKADIHAGYWIHCYIVKTGM-KLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFV 288
+ G IH + +G+ + + + + ++ +Y G A ++F + DR +
Sbjct: 149 ------VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
WN +I G+ + AL F + + ++PD ++S CS L++G
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G + +D+ + L +V+ + +
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 248/539 (46%), Gaps = 82/539 (15%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGL-EYARKVFDKLSARDVFCWNVVIKGY 92
K++HA +V G E D + L++ Y GL EYA VFD++ +DV WN++I GY
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYC---KVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV-------- 144
G +A+ + MR + T ++ A + G + + +
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 145 -----------KCG------------LDLDLFVGNALVSFYAKCQ--------------- 166
KCG ++ DL + N L++ YA+
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 470
Query: 167 --------------------EVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDA 202
+V+ ++ +F +M +++SW +M++G NG ++A
Sbjct: 471 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Query: 203 VLLFYDMFRHDDIGAPDNATLVTV-LPAFAQKADIHAGYWIHCYIVKTGMKLD-PNLGSG 260
+L M + G NA +TV L A A A +H G IH YI++ ++ +
Sbjct: 531 ILFLRKM---QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETS 587
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
L+ +YA CG I+ A +F + + NA+I Y ++G+ +EA+++++ L GL+PD
Sbjct: 588 LVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPD 647
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKS-EAHYACIVDLLGRAGDLKKAVEFI 379
+ +LSAC+HAG + Q ++F + + K HY +VDLL AG+ +KA+ I
Sbjct: 648 NITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLI 707
Query: 380 QSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQ 439
+ MP +P + +L+ +C + EL ++ + KL +P N+G YV ++ Y G W
Sbjct: 708 EEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWD 767
Query: 440 DAARVRKAIRENDIKKPIGYSSVEL--ESGHRKFGANDESHPYSAQIFETLQSLDRIMG 496
+ ++R+ ++ +KK G S +++ E G F AND++H +I L L MG
Sbjct: 768 EVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMG 826
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 195/384 (50%), Gaps = 15/384 (3%)
Query: 25 HLCKTTDSIK------KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKL 77
++CK ++K H VV G E F+ + L D Y G L+ A KVFD++
Sbjct: 178 NVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMY---GKCGVLDDASKVFDEI 234
Query: 78 SARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGH 137
R+ WN ++ GY G EA+ ++ +MR G P R T L A ++G
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
H A+ G++LD +G +L++FY K +E + VF+ M ++D+V+WN +ISGY G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL 257
V+DA+ + + R + + D TL T++ A A+ ++ G + CY ++ + D L
Sbjct: 355 LVEDAIYMC-QLMRLEKLKY-DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 258 GSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL 317
S ++ +YA CG I A+ +FD ++ + +WN ++ Y G + EAL +F + G+
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 318 RPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
P+ + + ++ + G + + D+F M++ G+ + + +++ + + G ++A+
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 532
Query: 378 FIQSMP---IQPGKNVYGALLGAC 398
F++ M ++P L AC
Sbjct: 533 FLRKMQESGLRPNAFSITVALSAC 556
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 169/329 (51%), Gaps = 9/329 (2%)
Query: 20 YTDLLHLC---KTTDSIKKAHAQVVVGG--HEQDPFIVAKLVDKYTLHSDSGLEYARKVF 74
Y ++L C + + K+ HA+++ G + ++ +I KLV Y LE A +F
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYA--KCDALEIAEVLF 130
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
KL R+VF W +I +G AL + EM P+ + P V KACGA + S+
Sbjct: 131 SKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSR 190
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYT 194
G +HG+ VK GL+ +FV ++L Y KC ++ + KVF+E+P R+ V+WN+++ GY
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
NG ++A+ LF DM + P T+ T L A A + G H + GM+LD
Sbjct: 251 QNGKNEEAIRLFSDMRKQGV--EPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELD 308
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
LG+ L++ Y G I A +FDR+ ++ + WN II Y G ++A+ M Q +
Sbjct: 309 NILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRL 368
Query: 315 AGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
L+ D V L+SA + L G ++
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLGKEV 397
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 4/247 (1%)
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG--LDLDLF 153
G EAL++ EM Y +L+ C ER G IH +K G + +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEY 108
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
+ LV FYAKC +E + +F+++ R++ SW ++I G + A++ F +M ++
Sbjct: 109 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENE 168
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
PDN + V A G +H Y+VK+G++ + S L +Y CG +
Sbjct: 169 IF--PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDD 226
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
A +FD I DR WNA++ Y +G +EA+ +F + G+ P V LSA ++
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 334 AGMLAQG 340
G + +G
Sbjct: 287 MGGVEEG 293
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 228/490 (46%), Gaps = 24/490 (4%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEY-ARKVF 74
+ F + +L C+ K+ H + G ++ ++ Y D Y A VF
Sbjct: 160 NEFTLSSVLTSCRYEPG-KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVF 218
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA----- 129
+ + +++ WN +I + +A+ V+ M G +R T +L C +
Sbjct: 219 EAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---LLNICSSLYKSS 275
Query: 130 ----ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAK-CQEVEASRKVFNEMPQ-RDI 183
S+ +H VK GL V AL+ Y++ ++ K+F EM RDI
Sbjct: 276 DLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDI 335
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
V+WN +I+ + Y + + + R + + +PD T +VL A A IH
Sbjct: 336 VAWNGIITAFAV--YDPERAIHLFGQLRQEKL-SPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
++K G D L + LI YA CG + + +FD + R + WN++++ Y +HG
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACI 362
L +FQ++ + PD F+ LLSACSHAG + +G +F++M E HYAC+
Sbjct: 453 SILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACV 509
Query: 363 VDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLF-VLDPNN 421
+D+L RA +A E I+ MP+ P V+ ALLG+CR H N L + A+KL +++P N
Sbjct: 510 IDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTN 569
Query: 422 AGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYS 481
+ Y+ ++ +Y G + +A K + ++K S E+ + +F + P
Sbjct: 570 SMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDK 629
Query: 482 AQIFETLQSL 491
++ L+ L
Sbjct: 630 EAVYRELKRL 639
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 56/426 (13%)
Query: 69 YARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG 128
YAR+VFD + R+V W +I GY G E ++ M + PN +T VL +C
Sbjct: 114 YARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCR 172
Query: 129 AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRK---VFNEMPQRDIVS 185
E G +HG A+K GL ++V NA++S Y +C + A+ + VF + +++V+
Sbjct: 173 YE----PGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVT 228
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI------HAG 239
WNSMI+ + A+ +F M H D D ATL+ + + + +D+
Sbjct: 229 WNSMIAAFQCCNLGKKAIGVFMRM--HSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCC 286
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANC--GYISMARAIFDRISDRTIFVWNAIIRCYG 297
+H VK+G+ + + LI +Y+ Y + + R I WN II +
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA 346
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS-----------HAGMLAQGW---DL 343
++ + A+ +F QL L PD F +L AC+ HA ++ G+ +
Sbjct: 347 VYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV 405
Query: 344 FQTMETYGVAKSEAHYACIV---DLLGR--------------AGDLKKAVEFIQSMPIQP 386
+ AK + C+ D+ R G + + Q M I P
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINP 465
Query: 387 GKNVYGALLGAC----RIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAA 442
+ ALL AC R+ + + + EK L N Y + M A ++ +A
Sbjct: 466 DSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN--HYACVIDMLSRAERFAEAE 523
Query: 443 RVRKAI 448
V K +
Sbjct: 524 EVIKQM 529
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 120 YPFVLKACGAERASQKGHAIHGHAVK---CGLDLDLFVGNALVSFYAKCQEVEASRKVFN 176
Y + +AC +R G +H H + C ++ + N L++ YAKC + +R+VF+
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPYC-YSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 177 EMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI 236
MP+R++VSW ++I+GY G + LF M H P+ TL +VL +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH---CFPNEFTLSSVLTS----CRY 173
Query: 237 HAGYWIHCYIVKTGMKLDPNLGSGLISLYANC---GYISMARAIFDRISDRTIFVWNAII 293
G +H +K G+ + + +IS+Y C A +F+ I + + WN++I
Sbjct: 174 EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMI 233
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVF--LCLLSACS 332
+ ++A+ +F + + DGV F LL+ CS
Sbjct: 234 AAFQCCNLGKKAIGVFMR-----MHSDGVGFDRATLLNICS 269
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/399 (30%), Positives = 189/399 (47%), Gaps = 44/399 (11%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYA 93
++ H ++ G E + L+D Y LE +R FD + +++ CWN ++ GYA
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYA--KCGNLEDSRLCFDYIRDKNIVCWNALLSGYA 393
Query: 94 NV-GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
N GP L+++ +M G P YT+ LK+C Q +H V+ G + +
Sbjct: 394 NKDGPIC--LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQ----LHSVIVRMGYEDND 447
Query: 153 FVGNALVSFYAKCQ--------------------------------EVEASRKVFNEMPQ 180
+V ++L+ YAK Q + S K+ + + Q
Sbjct: 448 YVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ 507
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
D VSWN I+ + + Y ++ + LF M + + PD T V++L ++ D+ G
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI--RPDKYTFVSILSLCSKLCDLTLGS 565
Query: 241 WIHCYIVKTGMKL-DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMH 299
IH I KT D + + LI +Y CG I +F+ ++ + W A+I C G+H
Sbjct: 566 SIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIH 625
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
G+ QEAL F++ + G +PD V F+ +L+AC H GM+ +G LFQ M+ YGV HY
Sbjct: 626 GYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHY 685
Query: 360 ACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGAC 398
C VDLL R G LK+A I+ MP V+ L C
Sbjct: 686 RCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 165/360 (45%), Gaps = 14/360 (3%)
Query: 23 LLHLCKTTDSIKKAHAQ-----VVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKL 77
LL++C+ S + A + Q ++ ++ Y + L A KVFD++
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSL--AGKVFDQM 75
Query: 78 SARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGH 137
R+ +N +IKGY+ G +A V+ EMR G PN+ T +L A + G
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC--ASLDVRAGT 133
Query: 138 AIHGHAVKCGLDL-DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTN 196
+HG ++K GL + D FVG L+ Y + +E + +VF +MP + + +WN M+S
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 197 GYVDDAVLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
G++ + + F ++ R +GA ++ + VL + D+ +HC K G+ +
Sbjct: 194 GFLKECMFFFRELVR---MGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
++ + LIS Y CG MA +F I WNAII + +AL +F + +
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
G P+ ++ +L S +L+ G + + G ++D + G+L+ +
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
LE A +VF+ + + + WN ++ + G E + + E+ G + ++ VLK
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
+ +H A K GLD ++ V N+L+S Y KC + ++F + DIVSW
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N++I + A+ LF M H +P+ T V+VL + + G IH +
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHG--FSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+K G + LG+ LI YA CG + +R FD I D+ I WNA++ Y + L
Sbjct: 343 IKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICL 401
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSAC 331
S+F Q++ G RP F L +C
Sbjct: 402 SLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 179/428 (41%), Gaps = 46/428 (10%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNV 87
K D K+ H G + + +V L+ Y ++ + A ++F + D+ WN
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHM--AERMFQDAGSWDIVSWNA 286
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+I A +AL ++ M G +PN+ TY VL + G IHG +K G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTT-NGYVDDAVLLF 206
+ + +GNAL+ FYAKC +E SR F+ + ++IV WN+++SGY +G + + LF
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLF 404
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA 266
M + P T T L + + +H IV+ G + + + S L+ YA
Sbjct: 405 LQMLQMG--FRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 267 NCGYISMARAIFDRISDRTIFV-WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
++ A + D S T V N + Y G E++ + L +PD V +
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE----QPDTVSWN 514
Query: 326 CLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ 385
++ACS + + +LF+ M + + + I+ L + DL
Sbjct: 515 IAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLT------------ 562
Query: 386 PGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVR 445
LG+ IH I +F+ FV + +L MY G + +V
Sbjct: 563 ---------LGS-SIHGLITKTDFSCADTFVCN--------VLIDMYGKCGSIRSVMKVF 604
Query: 446 KAIRENDI 453
+ RE ++
Sbjct: 605 EETREKNL 612
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 225/474 (47%), Gaps = 35/474 (7%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNV 87
K + + H+ V G D + LVD Y+ LE ARKVFD + +DV+ WN
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS--KCGKLEDARKVFDSVKNKDVYTWNS 423
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+I GY G +A ++ M+ A PN T+ ++ G + +G A
Sbjct: 424 MITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS--GYIKNGDEGEA--------- 472
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
+DLF Q +E KV QR+ +WN +I+GY NG D+A+ LF
Sbjct: 473 --MDLF------------QRMEKDGKV-----QRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYAN 267
M P++ T++++LPA A IH +++ + + + L YA
Sbjct: 514 KM--QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAK 571
Query: 268 CGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
G I +R IF + + I WN++I Y +HG AL++F Q+ G+ P+ +
Sbjct: 572 SGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 328 LSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQP 386
+ A G + +G +F ++ Y + + H + +V L GRA L++A++FIQ M IQ
Sbjct: 632 ILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS 691
Query: 387 GKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRK 446
++ + L CRIH +I++A AE LF L+P N I++Q+Y + + K
Sbjct: 692 ETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNK 751
Query: 447 AIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIFETLQSLDRIMGKEAQ 500
R+N +KKP+G S +E+ + F D+S + ++ ++ + R+ + Q
Sbjct: 752 PRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQ 805
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 206/466 (44%), Gaps = 79/466 (16%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD 64
QQ S ++ S Y LL C + SI + HA+ + E D F+ KL+ Y
Sbjct: 73 FQQGSKVKRS-TYLKLLESCIDSGSIHLGRILHARFGLFT-EPDVFVETKLLSMYA--KC 128
Query: 65 SGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVL 124
+ ARKVFD + R++F W+ +I Y+ + E ++ M G P+ + +P +L
Sbjct: 129 GCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKIL 188
Query: 125 KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV 184
+ C + G IH +K G+ L V N++++ YAKC E++ + K F M +RD++
Sbjct: 189 QGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI 248
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFR----------------HDDIGAPDNAT-LVTVL 227
+WNS++ Y NG ++AV L +M + ++ +G D A L+ +
Sbjct: 249 AWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 228 PAFAQKADIHAGYWIHCYIVKTGMK---LD-----------PN----------------- 256
F AD+ + ++ GM+ LD PN
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 257 --------------------LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCY 296
+G+ L+ +Y+ CG + AR +FD + ++ ++ WN++I Y
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGY 428
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG-VAKS 355
G+ +A +F ++ DA LRP+ + + ++S G + DLFQ ME G V ++
Sbjct: 429 CQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRN 488
Query: 356 EAHYACIVDLLGRAGDLKKAVEFIQSMPIQ---PGKNVYGALLGAC 398
A + I+ + G +A+E + M P +LL AC
Sbjct: 489 TATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 169/366 (46%), Gaps = 15/366 (4%)
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGL--DLDLF 153
G EA D + G+ R TY +L++C + G +H + GL + D+F
Sbjct: 60 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVF 116
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHD 213
V L+S YAKC + +RKVF+ M +R++ +W++MI Y+ + LF M +
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK-- 174
Query: 214 DIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISM 273
D PD+ +L A D+ AG IH ++K GM + + ++++YA CG +
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSH 333
A F R+ +R + WN+++ Y +G +EA+ + +++ G+ P V + L+ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 334 AGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNV 390
G DL Q MET+G+ + ++ L G +A++ + M + P
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
Query: 391 YGALLGACRIHKNIELAE---FTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKA 447
+ + AC K I A K+ +D G L MY G+ +DA +V +
Sbjct: 355 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS--LVDMYSKCGKLEDARKVFDS 412
Query: 448 IRENDI 453
++ D+
Sbjct: 413 VKNKDV 418
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/508 (28%), Positives = 248/508 (48%), Gaps = 60/508 (11%)
Query: 5 SRR---LQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTL 61
SRR L+ ++++ S Y+ L+ + H Q ++ +E + I+ +L +T
Sbjct: 6 SRRITSLRSYTIIKHSSCYSTLV---SDGNIFSIQHFQSLMQKYESNLKIIHQLHSHFT- 61
Query: 62 HSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMR--------CAGT 113
SG + K ++ +F +N +++ Y+ A +YD+++
Sbjct: 62 --TSGFLLLHQ---KQNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSL 116
Query: 114 TP-NRYTYPFVLKACGAER--ASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEA 170
P + +TY F+LKA R + G +HG +K G + ++V ALV Y +
Sbjct: 117 PPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMID 176
Query: 171 SRKVFNEMPQRDIVSWNSMISGYTT--------------------------NGY--VD-- 200
+ KVF+EMP+R+ V+WN MI+G T +GY VD
Sbjct: 177 AHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKP 236
Query: 201 -DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTG-MKLDPNLG 258
+A+LLF M D I P+ T++ +LPA D+ +H Y+ K G + D +
Sbjct: 237 KEAILLFSRMVACDAI-KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVT 295
Query: 259 SGLISLYANCGYISMARAIFDRISD--RTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+ LI YA CG I A F I + + + W +I + +HG +EA+SMF+ + G
Sbjct: 296 NSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLG 355
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGW-DLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKK 374
L+P+ V + +L+ACSH G+ + + + F TM Y + HY C+VD+L R G L++
Sbjct: 356 LKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEE 415
Query: 375 AVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYED 434
A + +PI+ V+ LLGAC ++ + ELAE KL L+ ++ G YV+++ ++
Sbjct: 416 AEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCG 475
Query: 435 AGQWQDAARVRKAIRENDIKKPIGYSSV 462
G++ DA R RK + + K G+S V
Sbjct: 476 TGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 199/409 (48%), Gaps = 10/409 (2%)
Query: 10 QISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGL-E 68
++SV+ D+ T + + D ++ A +V +D + Y + SGL
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESAR-RVFDQTRSKDLKSWTSAMSGYAM---SGLTR 346
Query: 69 YARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACG 128
AR++FD + R++ WN ++ GY + + EAL+ MR + T ++L C
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 129 AERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ-RDIVSWN 187
Q G HG + G D ++ V NAL+ Y KC ++++ F +M + RD VSWN
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 188 SMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIV 247
++++G G + A+ F M P TL T+L A ++ G IH +++
Sbjct: 467 ALLTGVARVGRSEQALSFFEGMQVE---AKPSKYTLATLLAGCANIPALNLGKAIHGFLI 523
Query: 248 KTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALS 307
+ G K+D + ++ +Y+ C A +F + R + +WN+IIR +G ++E
Sbjct: 524 RDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFE 583
Query: 308 MFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLL 366
+F L + G++PD V FL +L AC G + G+ F +M T Y ++ HY C+++L
Sbjct: 584 LFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELY 643
Query: 367 GRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLF 415
+ G L + EF+ MP P + + AC+ ++ +L + A++L
Sbjct: 644 CKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 182/422 (43%), Gaps = 46/422 (10%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKY---TLHSDSGLEYARKVFDKLSARDVFCWNVVI 89
+++ H VV G+ + + +VD Y + SD AR+VFD++ WNV++
Sbjct: 181 LRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD-----ARRVFDEIVNPSDVSWNVIV 235
Query: 90 KGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLD 149
+ Y +G EA+ ++ +M P +T V+ AC A + G IH AVK +
Sbjct: 236 RRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV 295
Query: 150 LDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF--- 206
D V ++ Y KC +E++R+VF++ +D+ SW S +SGY +G +A LF
Sbjct: 296 ADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM 355
Query: 207 --------------------------YDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
+ +I DN TLV +L + +D+ G
Sbjct: 356 PERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGK 415
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD-RTIFVWNAIIRCYGMH 299
H +I + G + + + L+ +Y CG + A F ++S+ R WNA++
Sbjct: 416 QAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARV 475
Query: 300 GHAQEALSMFQQL-VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
G +++ALS F+ + V+A +P LL+ C++ L G + + G
Sbjct: 476 GRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVI 533
Query: 359 YACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD 418
+VD+ + A+E + + + G CR ++ E+ E LF+L
Sbjct: 534 RGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFE-----LFMLL 588
Query: 419 PN 420
N
Sbjct: 589 EN 590
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 159/372 (42%), Gaps = 34/372 (9%)
Query: 70 ARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
AR++F+++ RD WN VI A G E ++ M G ++ VLK+CG
Sbjct: 115 ARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGL 174
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSM 189
+ +H VK G ++ + ++V Y KC+ + +R+VF+E+ VSWN +
Sbjct: 175 ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVI 234
Query: 190 ISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKT 249
+ Y G+ D+AV++F+ M + P N T+ +V+ A ++ + G IH VK
Sbjct: 235 VRRYLEMGFNDEAVVMFFKMLELN--VRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKL 292
Query: 250 GMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMF 309
+ D + + + +Y C + AR +FD+ + + W + + Y M G +EA +F
Sbjct: 293 SVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELF 352
Query: 310 QQLVDAGL-------------------------------RPDGVVFLCLLSACSHAGMLA 338
+ + + D V + +L+ CS +
Sbjct: 353 DLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQ 412
Query: 339 QGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALL-GA 397
G + +G + ++D+ G+ G L+ A + + M + + ALL G
Sbjct: 413 MGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 398 CRIHKNIELAEF 409
R+ ++ + F
Sbjct: 473 ARVGRSEQALSF 484
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 2/223 (0%)
Query: 118 YTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE 177
+ Y + ++C ++ + + H V +F+ N + Y KC V+ +R++F E
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 178 MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIH 237
MP+RD SWN++I+ NG D+ +F M R D + A + + VL + D+
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR-DGVRATET-SFAGVLKSCGLILDLR 179
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
+HC +VK G + +L + ++ +Y C +S AR +FD I + + WN I+R Y
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQG 340
G EA+ MF ++++ +RP ++ ACS + L G
Sbjct: 240 EMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVG 282
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 170/332 (51%), Gaps = 38/332 (11%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
LE ARK FD++ + V WN ++ GYA G +AL ++++M G PN T+ V+ A
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNE--------- 177
C ++ + + L+ FV AL+ +AKC++++++R++FNE
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 178 -----------------------MPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDD 214
MP+R++VSWNS+I+GY NG A+ F DM + D
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 215 IGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
PD T+++VL A AD+ G I YI K +KL+ + LI +YA G + A
Sbjct: 394 -SKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+ +FD + +R + +N + + +G E L++ ++ D G+ PD V + +L+AC+ A
Sbjct: 453 KRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRA 512
Query: 335 GMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
G+L +G +F+++ HYAC+ DLL
Sbjct: 513 GLLKEGQRIFKSIRN----PLADHYACM-DLL 539
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 169/377 (44%), Gaps = 86/377 (22%)
Query: 44 GHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALN 103
G +DP++ ++D Y H +E ARKVFD++S R WNV+I GY G EA
Sbjct: 131 GFFKDPYVRNVIMDMYVKHE--SVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACK 188
Query: 104 VYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYA 163
++D M P D+ +++ +A
Sbjct: 189 LFDMM------PEN---------------------------------DVVSWTVMITGFA 209
Query: 164 KCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA-PDNAT 222
K +++E +RK F+ MP++ +VSWN+M+SGY NG+ +DA+ LF DM R +G P+ T
Sbjct: 210 KVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR---LGVRPNETT 266
Query: 223 LVTVLPAFAQKA----------------------------DIHAGYWIHCYIVKTGMKLD 254
V V+ A + +A D+HA C +++ ++
Sbjct: 267 WVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHA----KCRDIQSARRIF 322
Query: 255 PNLGS--------GLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
LG+ +IS Y G +S AR +FD + R + WN++I Y +G A A+
Sbjct: 323 NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAI 382
Query: 307 SMFQQLVDAG-LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDL 365
F+ ++D G +PD V + +LSAC H L G + + + +++ Y ++ +
Sbjct: 383 EFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFM 442
Query: 366 LGRAGDLKKAVEFIQSM 382
R G+L +A M
Sbjct: 443 YARGGNLWEAKRVFDEM 459
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 169/375 (45%), Gaps = 51/375 (13%)
Query: 29 TTDSIKKAHAQVVV-GGHEQDPFIVAKLVDKYT-LHSDSGLEYARKVFDKLSARDVFCWN 86
T + + HAQ++V + + ++++ T L + S Y R +FD ++ +VF N
Sbjct: 18 TFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPS--YYTRLIFDSVTFPNVFVVN 75
Query: 87 VVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKC 146
+ K ++ + + L +Y++ G P+ +++P V+K+ G + G K
Sbjct: 76 SMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKL 130
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLF 206
G D +V N ++ Y K + VE++RKVF+++ QR WN MISGY G ++A LF
Sbjct: 131 GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF 190
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA 266
DM +D+ + ++ FA+ D+
Sbjct: 191 -DMMPENDV-----VSWTVMITGFAKVKDLEN---------------------------- 216
Query: 267 NCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
AR FDR+ ++++ WNA++ Y +G ++AL +F ++ G+RP+ ++
Sbjct: 217 -------ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVI 269
Query: 327 LLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQP 386
++SACS + L + ++ V + ++D+ + D++ A + Q
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 387 GKNVYGALL-GACRI 400
+ A++ G RI
Sbjct: 330 NLVTWNAMISGYTRI 344
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 232/515 (45%), Gaps = 74/515 (14%)
Query: 21 TDLLHLCKTTDS------IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVF 74
+ L+HL + + + ++ H V G + + L+ Y SDS LE A KVF
Sbjct: 56 SPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKT-SDS-LEDAHKVF 113
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
D++ DV WN ++ GY G F E + ++ E+ + PN +++ L AC S
Sbjct: 114 DEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSP 173
Query: 135 KGHAIHGHAVKCGLDL-DLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
G IH VK GL+ ++ VGN L+ Y KC ++ + VF M ++D VSWN++++
Sbjct: 174 LGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASC 233
Query: 194 TTNGYVDDAVLLFYDMFRHD-------------------------DIGAPDNATLVTVLP 228
+ NG ++ + F+ M D D+ P++++ T+L
Sbjct: 234 SRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILT 293
Query: 229 AFAQK----------ADIHA-------------------------GYWIHCYIVKTGMKL 253
+ +H+ G IH K G+
Sbjct: 294 GYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDS 353
Query: 254 DPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+ S LI +Y+ CG + A +F + + + VWN +I Y +G + EA+ +F QL
Sbjct: 354 RVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLK 413
Query: 314 -DAGLRPDGVVFLCLLSACSHAGM-LAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAG 370
+ L+PD FL LL+ CSH + + F+ M Y + S H ++ +G+ G
Sbjct: 414 QERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRG 473
Query: 371 DLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR--YVIL 428
++ +A + IQ + ALLGAC K+++ A+ A K+ L + Y+++
Sbjct: 474 EVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVM 533
Query: 429 AQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVE 463
+ +Y +W++ ++RK +RE+ + K +G S ++
Sbjct: 534 SNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 8/264 (3%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
W+ ++ A G L E+ G P+ +L+ G +HG+
Sbjct: 24 WSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVL 204
K G + + N+L+ FY +E + KVF+EMP D++SWNS++SGY +G + +
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 205 LFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM-KLDPNLGSGLIS 263
LF ++ R D P+ + L A A+ G IH +VK G+ K + +G+ LI
Sbjct: 143 LFLELHRSDVF--PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 264 LYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVV 323
+Y CG++ A +F + ++ WNAI+ +G + L F Q+ + PD V
Sbjct: 201 MYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVT 256
Query: 324 FLCLLSACSHAGMLAQGWDLFQTM 347
+ L+ A +G + + M
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDM 280
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 130/311 (41%), Gaps = 25/311 (8%)
Query: 185 SWNSMISG---YTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYW 241
SW++++ + + G + AV L +D PD + LV +L +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELI------NDGEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
+H Y+ K G + L + L+ Y + A +FD + D + WN+++ Y G
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYA- 360
QE + +F +L + + P+ F L+AC+ + G + + G+ K
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
C++D+ G+ G + AV Q M + + A++ +C + +EL + ++ PN
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQM----PN 251
Query: 421 -NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHP 479
+ Y L + +G + +A +V +D+ P S + +G+ N E
Sbjct: 252 PDTVTYNELIDAFVKSGDFNNAFQVL-----SDMPNPNSSSWNTILTGY----VNSEKSG 302
Query: 480 YSAQIFETLQS 490
+ + F + S
Sbjct: 303 EATEFFTKMHS 313
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 174/342 (50%), Gaps = 9/342 (2%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSD 64
L+Q + ++ ++ LL C S+ K+ H + + G E + F+ KLV YT +
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYT--AC 159
Query: 65 SGLEYARKVFDKLSARDVFCWNVVIKGYANVGP--FAEALNVYDEMRCAGTTPNRYTYPF 122
++ A+KVFD+ ++ +V+ WN +++G G + + L+ + EMR G N Y+
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
V K+ A ++G H A+K GL +F+ +LV Y KC +V +R+VF+E+ +RD
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
IV W +MI+G N +A+ LF M + I P++ L T+LP + G +
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI-YPNSVILTTILPVLGDVKALKLGKEV 338
Query: 243 HCYIVKTGMKLD-PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
H +++K+ ++ P + SGLI LY CG ++ R +F R W A++ Y +G
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
+AL + G RPD V +L C+ + QG ++
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 171/344 (49%), Gaps = 6/344 (1%)
Query: 34 KKAHAQVVVG-GHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
K+ HA V+ + + PF+ + L+D Y D + R+VF R+ W ++ GY
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD--MASGRRVFYGSKQRNAISWTALMSGY 393
Query: 93 ANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDL 152
A G F +AL M+ G P+ T VL C RA ++G IH +A+K ++
Sbjct: 394 AANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNV 453
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
+ +L+ Y+KC E ++F+ + QR++ +W +MI Y N + + +F M
Sbjct: 454 SLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS 513
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
PD+ T+ VL + + G +H +I+K + P + + +I +Y CG +
Sbjct: 514 KH--RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 273 MARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACS 332
A FD ++ + W AII YG + ++A++ F+Q+V G P+ F +LS CS
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 333 HAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGDLKKA 375
AG + + + F M Y + SE HY+ +++LL R G +++A
Sbjct: 632 QAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 8/289 (2%)
Query: 89 IKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGL 148
I+ +A AL + D + G N T+ +L+AC ++ G +H H GL
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 149 DLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG--YVDDAVLLF 206
+ + F+ LV Y C V+ ++KVF+E ++ SWN+++ G +G D + F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 207 YDMFRHDDIGAPDNA-TLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY 265
+M ++G N +L V +FA + + G H +K G+ L + L+ +Y
Sbjct: 203 TEM---RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMY 259
Query: 266 ANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV-DAGLRPDGVVF 324
CG + +AR +FD I +R I VW A+I + EAL +F+ ++ + + P+ V+
Sbjct: 260 FKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVIL 319
Query: 325 LCLLSACSHAGMLAQGWDLF-QTMETYGVAKSEAHYACIVDLLGRAGDL 372
+L L G ++ +++ + ++ ++DL + GD+
Sbjct: 320 TTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDM 368
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 178/352 (50%), Gaps = 6/352 (1%)
Query: 33 IKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGY 92
IK+ HA + +Q + L+ D L YARKVFD + ++ W +I GY
Sbjct: 101 IKRIHAMALKCFDDQVIYFGNNLISSCVRLGD--LVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 93 ANVGPFAEALNVYDEMRCAGTT-PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD 151
G EA ++++ G N + +L C + G +HG+ VK G+ +
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-N 217
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFR 211
L V ++LV FYA+C E+ ++ + F+ M ++D++SW ++IS + G+ A+ +F M
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 212 HDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
H + P+ T+ ++L A +++ + G +H +VK +K D +G+ L+ +YA CG I
Sbjct: 278 HWFL--PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEI 335
Query: 272 SMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
S R +FD +S+R W +II + G +EA+S+F+ + L + + + +L AC
Sbjct: 336 SDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRAC 395
Query: 332 SHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP 383
G L G +L + + K+ + +V L + G+ + A +Q +P
Sbjct: 396 GSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 155/317 (48%), Gaps = 2/317 (0%)
Query: 67 LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
L A + FD + +DV W VI + G +A+ ++ M PN +T +LKA
Sbjct: 234 LTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKA 293
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSW 186
C E+A + G +H VK + D+FVG +L+ YAKC E+ RKVF+ M R+ V+W
Sbjct: 294 CSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTW 353
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
S+I+ + G+ ++A+ LF M R I +N T+V++L A + G +H I
Sbjct: 354 TSIIAAHAREGFGEEAISLFRIMKRRHLIA--NNLTVVSILRACGSVGALLLGKELHAQI 411
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
+K ++ + +GS L+ LY CG A + ++ R + W A+I GH EAL
Sbjct: 412 IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEAL 471
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
++++ G+ P+ + L AC+++ L G + + + + ++ +
Sbjct: 472 DFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMY 531
Query: 367 GRAGDLKKAVEFIQSMP 383
+ G + +A SMP
Sbjct: 532 AKCGFVSEAFRVFDSMP 548
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 158/321 (49%), Gaps = 7/321 (2%)
Query: 14 LRDSFYYTDLLHLCKTTDSIK---KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYA 70
L + F +L C +++ + H+ VV + D F+ L+D Y + +
Sbjct: 281 LPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE--ISDC 338
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
RKVFD +S R+ W +I +A G EA++++ M+ N T +L+ACG+
Sbjct: 339 RKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSV 398
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMI 190
A G +H +K ++ ++++G+ LV Y KC E + V ++P RD+VSW +MI
Sbjct: 399 GALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMI 458
Query: 191 SGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTG 250
SG ++ G+ +A+ +M + P+ T + L A A + G IH K
Sbjct: 459 SGCSSLGHESEALDFLKEMIQEGV--EPNPFTYSSALKACANSESLLIGRSIHSIAKKNH 516
Query: 251 MKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQ 310
+ +GS LI +YA CG++S A +FD + ++ + W A+I Y +G +EAL +
Sbjct: 517 ALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 311 QLVDAGLRPDGVVFLCLLSAC 331
++ G D +F +LS C
Sbjct: 577 RMEAEGFEVDDYIFATILSTC 597
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 9/216 (4%)
Query: 6 RRLQQISVLRDSFYYTDLLHLCKTTDSI---KKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
R +++ ++ ++ +L C + ++ K+ HAQ++ E++ +I + LV Y
Sbjct: 374 RIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKC 433
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
+S A V +L +RDV W +I G +++G +EAL+ EM G PN +TY
Sbjct: 434 GES--RDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 491
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
LKAC + G +IH A K ++FVG+AL+ YAKC V + +VF+ MP+++
Sbjct: 492 ALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKN 551
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDM----FRHDD 214
+VSW +MI GY NG+ +A+ L Y M F DD
Sbjct: 552 LVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 133/264 (50%), Gaps = 38/264 (14%)
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
+H I + LD + L+ +Y+NCG + A ++F+++S++ + W IIRC+ +G
Sbjct: 276 VHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGF 335
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYA 360
++A+ MF + + G PDG +F + AC G + +G F++M YG+A S Y
Sbjct: 336 GEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYV 395
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
+V++ G L +A+EF++ MP++P +V+ L+ R+H N+EL ++ AE + LDP
Sbjct: 396 SLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP- 454
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRK---------- 470
R+ K RE I P+ S VE ES ++
Sbjct: 455 ---------------------TRLNKQSREGFI--PVKASDVEKESLKKRSGILHGVKSS 491
Query: 471 ---FGANDESHPYSAQIFETLQSL 491
F A D + P + ++F+ L++L
Sbjct: 492 MQEFRAGDTNLPENDELFQLLRNL 515
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 125 KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV 184
K CG Q+ +HG LDL + L+ Y+ C + VF +M ++++
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHC 244
+W +I + NG+ +DA+ +F +I PD + A D+ G +H
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI--PDGQLFRGIFYACGMLGDVDEGL-LHF 378
Query: 245 YIVKTGMKLDPNLGS--GLISLYANCGYISMARAIFDRIS-DRTIFVWNAIIRCYGMHGH 301
+ + P++ L+ +YA G++ A +R+ + + VW ++ +HG+
Sbjct: 379 ESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGN 438
Query: 302 AQ 303
+
Sbjct: 439 LE 440
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 162/364 (44%), Gaps = 20/364 (5%)
Query: 82 VFCWNVVIKGYANVG-PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
+ +NV++ + +G P+ + ++ ++M+ G P+ YTY ++ C Q+ +
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTN 196
G D NAL+ Y K + + KV NEM IV++NS+IS Y +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G +D+A+ L M PD T T+L F + + + I + G K +
Sbjct: 363 GMLDEAMELKNQMAEKGT--KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 257 LGSGLISLYANCGYISMARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
+ I +Y N G + IFD I+ I WN ++ +G +G E +F+++
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
AG P+ F L+SA S G Q +++ M GV + Y ++ L R G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 373 KKAVEFIQSMP---IQPGKNVYGALLGACRIHKNIELAEFTAEKLF--VLDPNNAGRYVI 427
+++ + + M +P + Y +LL A K I L AE+++ V++P R V+
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEP----RAVL 596
Query: 428 LAQM 431
L +
Sbjct: 597 LKTL 600
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 170/410 (41%), Gaps = 37/410 (9%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHA---QVVVGGHEQDPFIVAKLVDKYTLHS--DSGLEYA 70
D Y LL + + K+A ++V+ G L+ Y D +E
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
++ +K + DVF + ++ G+ G A+++++EMR AG PN T+ +K G
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM------PQRDIV 184
+ I CGL D+ N L++ + + VF EM P+R+
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE-- 490
Query: 185 SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIH 243
++N++IS Y+ G + A+ ++ M D G PD +T TVL A A+ G W
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRML---DAGVTPDLSTYNTVLAALAR-----GGMWEQ 542
Query: 244 CYIVKTGM---KLDPNLGS--GLISLYANCGYISMARAIFDR-----ISDRTIFVWNAII 293
V M + PN + L+ YAN I + ++ + I R + + ++
Sbjct: 543 SEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVL 602
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA 353
C EA F +L + G PD ++S M+A+ + M+ G
Sbjct: 603 VC-SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGA-CR 399
S A Y ++ + R+ D K+ E ++ + I+P Y ++ A CR
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/446 (18%), Positives = 174/446 (39%), Gaps = 68/446 (15%)
Query: 31 DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLS----ARDVFC-- 84
D + Q+ G + D F L+ SG E A KV +S R+ C
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLL--------SGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 85 ----WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
+N IK Y N G F E + ++DE+ G +P+ T+ +L G + +
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM----PQRDIVSWNSMISGYTTN 196
+ G + N L+S Y++C E + V+ M D+ ++N++++
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI-----------HCY 245
G + + + +M D P+ T ++L A+A +I + +
Sbjct: 538 GMWEQSEKVLAEM--EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAV 595
Query: 246 IVKT------------------------GMKLDPNLGSGLISLYANCGYISMARAIFDRI 281
++KT G D + ++S+Y ++ A + D +
Sbjct: 596 LLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Query: 282 SDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGML 337
+R ++ +N+++ + ++ + ++++ G++PD + + ++ A +
Sbjct: 656 KERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRM 715
Query: 338 AQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGAL 394
+F M G+ Y + ++A+ ++ M +P +N Y ++
Sbjct: 716 RDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Query: 395 L-GACRIHKNIELAEFTAEKLFVLDP 419
+ G C++++ E A+ E L LDP
Sbjct: 776 VDGYCKLNRKDE-AKLFVEDLRNLDP 800
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 117/271 (43%), Gaps = 17/271 (6%)
Query: 201 DAVLLFYDMF--RHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLG 258
D L +D F + D DN+ + ++ ++ + + + + + G LD
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 259 SGLISLYANCGYISMARAIFDRISD----RTIFVWNAIIRCYGMHGHA-QEALSMFQQLV 313
+ LIS +AN G A +F ++ + T+ +N I+ +G G + S+ +++
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
G+ PD + L++ C + + +F+ M+ G + + Y ++D+ G++ K
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 374 KAVEFIQSMPIQ---PGKNVYGALLGA----CRIHKNIELAEFTAEKLFVLDPNNAGRYV 426
+A++ + M + P Y +L+ A + + +EL AEK D Y
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD---VFTYT 388
Query: 427 ILAQMYEDAGQWQDAARVRKAIRENDIKKPI 457
L +E AG+ + A + + +R K I
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 101/254 (39%), Gaps = 15/254 (5%)
Query: 147 GLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ----RDIVSWNSMISGYTTNGYVDDA 202
G LD++ +L+S +A + VF +M + ++++N +++ + G +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 203 VLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
+ + + D I APD T T++ + + + + G D + L+
Sbjct: 263 ITSLVEKMKSDGI-APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALL 321
Query: 263 SLYANCGYISMARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLR 318
+Y A + + + +I +N++I Y G EA+ + Q+ + G +
Sbjct: 322 DVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTK 381
Query: 319 PDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEF 378
PD + LLS AG + +F+ M G + + + + G G +F
Sbjct: 382 PDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG------KF 435
Query: 379 IQSMPIQPGKNVYG 392
+ M I NV G
Sbjct: 436 TEMMKIFDEINVCG 449
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 119/220 (54%), Gaps = 2/220 (0%)
Query: 205 LFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLIS 263
L+ D D GA PD V + + A + +H + +++ + DP L + +IS
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVIS 279
Query: 264 LYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVV 323
++ C I+ A+ +FD + D+ + W+ ++ Y +G +AL +F+++ GL+P+
Sbjct: 280 MFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEET 339
Query: 324 FLCLLSACSHAGMLAQGWDLFQTMET-YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
FL + AC+ G + + + F +M+ +G++ HY ++ +LG+ G L +A ++I+ +
Sbjct: 340 FLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDL 399
Query: 383 PIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNA 422
P +P + + A+ R+H +I+L ++ E + +DP+ A
Sbjct: 400 PFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 10/220 (4%)
Query: 98 FAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNA 157
+ +A+ + D+ G P+R + + ++C ++ + +H H ++ D + N
Sbjct: 221 YKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 158 LVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA 217
++S + +C + +++VF+ M +D+ SW+ M+ Y+ NG DDA+ LF +M +H
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG--LK 334
Query: 218 PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS--GLISLYANCGYISMAR 275
P+ T +TV A A I + +H +K + P G++ + CG++ A
Sbjct: 335 PNEETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAE 393
Query: 276 A-IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
I D + T W A+ +HG M + +VD
Sbjct: 394 QYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVD 433
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 17/257 (6%)
Query: 236 IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRC 295
+ A +H I+ D + +I +Y+ C + A +F+ + + ++RC
Sbjct: 135 LEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRC 194
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAK 354
+ +G+ +EA+ +F + + G +P+G +F + S C+ G + +G FQ M YG+
Sbjct: 195 FVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVP 254
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKL 414
S HY + +L +G L +A+ F++ MP++P +V+ L+ R+H ++EL + AE +
Sbjct: 255 SMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELV 314
Query: 415 FVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGAN 474
LD A R ++ A + D + + R +P YS+ F
Sbjct: 315 EKLD---ATRLDKVSSAGLVATKASDFVKKEPSTR----SEPYFYST---------FRPV 358
Query: 475 DESHPYSAQIFETLQSL 491
D SHP I+ETL SL
Sbjct: 359 DSSHPQMNIIYETLMSL 375
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 17/228 (7%)
Query: 86 NVVIKGYANV---GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
NV I+ + ++ G + EA+ V D + G + + K CG A + +H
Sbjct: 85 NVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHEC 144
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNS-----MISGYTTNG 197
+ D+ NA++ Y+ C V+ + KVF EMP+ WNS M+ + NG
Sbjct: 145 IIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPE-----WNSGTLCVMMRCFVNNG 199
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG-YWIHCYIVKTGMKLDPN 256
Y ++A+ LF F+ + P+ V D+ G + G+
Sbjct: 200 YGEEAIDLF-TRFKEEG-NKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSME 257
Query: 257 LGSGLISLYANCGYISMARAIFDRIS-DRTIFVWNAIIRCYGMHGHAQ 303
+ + A G++ A +R+ + ++ VW ++ +HG +
Sbjct: 258 HYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVE 305
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 166/385 (43%), Gaps = 46/385 (11%)
Query: 30 TDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARD----VFCW 85
T +I + +++ G + ++ L++K+ + + A+KVFD+++ R V +
Sbjct: 221 TGTIWGFYMEILDAGFPLNVYVFNILMNKFC--KEGNISDAQKVFDEITKRSLQPTVVSF 278
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK 145
N +I GY VG E + +M + T P+ +TY ++ A E H + K
Sbjct: 279 NTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCK 338
Query: 146 CGLDLDLFVGNALVSFYAKCQEV----EASRKVFNEMPQRDIVSWNSMISGYTTNGYVDD 201
GL + + L+ +++ E+ E+ +K+ ++ Q DIV +N++++G+ NG +
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
A + M R PD T T++ F + D+ I + + G++LD S L
Sbjct: 399 ARNIVDGMIRRG--LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 262 ISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
+ CG R I A+ AL ++++ AG++PD
Sbjct: 457 V-----CGMCKEGRVI-----------------------DAERAL---REMLRAGIKPDD 485
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
V + ++ A G G+ L + M++ G S Y +++ L + G +K A + +
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 382 M---PIQPGKNVYGALLGACRIHKN 403
M + P Y LL H N
Sbjct: 546 MLNIGVVPDDITYNTLLEGHHRHAN 570
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 123/263 (46%), Gaps = 33/263 (12%)
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
+H +I + D + + +I +Y+ CG + A +F+ + +R + W +IRC+ +G
Sbjct: 203 VHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ 262
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYA 360
++A+ F + G +PDG +F + AC G + +G F++M + YG+ HY
Sbjct: 263 GEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV 322
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPN 420
+V +L G L +A+ F++SM +P +++ L+ R+H ++
Sbjct: 323 SLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDL---------------- 364
Query: 421 NAGRYVILAQMYEDAGQWQDAARVRK-------AIREND-IKKPIGYSSVELESGHRKFG 472
IL +D + DA+R+ K ++ +D +K+ + + G R
Sbjct: 365 ------ILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNYGIRYMA 418
Query: 473 ANDESHPYSAQIFETLQSLDRIM 495
A D S P + +++ L+SL M
Sbjct: 419 AGDISRPENRELYMALKSLKEHM 441
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 88/207 (42%), Gaps = 6/207 (2%)
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVG 155
G +A+ + R G + ++ + CG +A Q+ +H D+
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 156 NALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
N+++ Y+ C VE + VFN MP+R++ +W +I + NG +DA+ F F+ +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTF-SRFKQEG- 277
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS--GLISLYANCGYISM 273
PD + A D++ G +H + + P + L+ + A GY+
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGL-LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDE 336
Query: 274 ARAIFDRISDRTIFVWNAIIRCYGMHG 300
A + + + + +W ++ +HG
Sbjct: 337 ALRFVESM-EPNVDLWETLMNLSRVHG 362
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 143/322 (44%), Gaps = 15/322 (4%)
Query: 92 YANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLD 151
Y VG +AL++++EM+ AG +P YTY ++K G + + + ++ GL D
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMPQ----RDIVSWNSMISG-YTTNGYVDDAVLLF 206
+ N L++ K VE VF+EM +VS+N++I + + +V + V +
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE-VSSW 396
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA 266
+D + D + +P T ++ + + + + + + G P LI+
Sbjct: 397 FDKMKADSV-SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455
Query: 267 NCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
A +F + + + V+ +I+ +G G EA+ +F ++ + G PD
Sbjct: 456 KAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 323 VFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
+ L+S AGM+ + L + ME G + I++ R G ++A+E +++
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI 575
Query: 383 P---IQPGKNVYGALLGACRIH 401
I+P Y LLG C H
Sbjct: 576 KHSGIKPDGVTYNTLLG-CFAH 596
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 152/344 (44%), Gaps = 18/344 (5%)
Query: 70 ARKVFDKLSA----RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
A+++F+ A V+ ++ +I Y G EA++V++ M+ G PN TY V+
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 126 ACGAERASQKGHA-IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR--- 181
ACG K A + G+ D N+L++ ++ EA+R +F+EM R
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 182 -DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
D+ S+N+++ G +D A + M + P+ + TV+ FA+
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM--PNVVSYSTVIDGFAKAGRFDEAL 429
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD----RTIFVWNAIIRCY 296
+ + G+ LD + L+S+Y G A I ++ + + +NA++ Y
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSE 356
G G E +F ++ + P+ + + L+ S G+ + ++F+ ++ G+
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADV 549
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGALLGA 397
Y+ ++D L + G + AV I M I P Y +++ A
Sbjct: 550 VLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 19/359 (5%)
Query: 34 KKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGL-EYARKVFDKLSA----RDVFCWNVV 88
K+ GG+ + + L+ Y SGL E A VF+ + ++ +N V
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAY---GRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 309
Query: 89 IKGYANVG-PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
I G F + +DEM+ G P+R T+ +L C + +
Sbjct: 310 IDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR 369
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAV 203
++ D+F N L+ K +++ + ++ +MP + ++VS++++I G+ G D+A+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 204 LLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLIS 263
LF +M R+ I A D + T+L + + I + G+K D + L+
Sbjct: 430 NLFGEM-RYLGI-ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLG 487
Query: 264 LYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRP 319
Y G + +F + + ++ +I Y G +EA+ +F++ AGLR
Sbjct: 488 GYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA 547
Query: 320 DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEF 378
D V++ L+ A G++ L M G++ + Y I+D GR+ + ++ ++
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 159/427 (37%), Gaps = 67/427 (15%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTT---DSIKKAHAQVVVGGHEQDPFIVAKLVDKYTL--H 62
+Q+ V D + LL +C ++ + ++ EQD F L+D
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 63 SDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
D E ++ K +V ++ VI G+A G F EALN++ EMR G +R +Y
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY-- 447
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP--- 179
N L+S Y K E + + EM
Sbjct: 448 ---------------------------------NTLLSIYTKVGRSEEALDILREMASVG 474
Query: 180 -QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
++D+V++N+++ GY G D+ +F +M R + P+ T T++ +++
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL--PNLLTYSTLIDGYSKGGLYKE 532
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIR 294
I G++ D L S LI G + A ++ D ++ + +N+II
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAK 354
+G + + G P L L+ + ++ +G
Sbjct: 593 AFGRSATMDRS----ADYSNGGSLPFSSSALSALTETEGN----------RVIQLFGQLT 638
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGACRIHKNIELAEFTA 411
+E++ D +L +E + M I+P + A+L AC + E A
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLL 698
Query: 412 EKLFVLD 418
E+L + D
Sbjct: 699 EELRLFD 705
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 105/264 (39%), Gaps = 45/264 (17%)
Query: 257 LGSGLISLYANCGYISMARAIFDRI----SDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
L S +IS G +++A+ IF+ T++ ++A+I YG G +EA+S+F +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 313 VDAGLRP------------------------------------DGVVFLCLLSACSHAGM 336
+ GLRP D + F LL+ CS G+
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 337 LAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQ---PGKNVYGA 393
+LF M + + Y ++D + + G + A E + MP++ P Y
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 394 LL-GACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREND 452
++ G + + E E ++ + Y L +Y G+ ++A + + +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 453 IKKPIGYSSVELESGHRKFGANDE 476
IKK + + L G+ K G DE
Sbjct: 475 IKKDV-VTYNALLGGYGKQGKYDE 497
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 253 LDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
LD +I +Y+ C A +F+ + R W +IRC +G + A+ MF +
Sbjct: 141 LDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRF 200
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYACIVDLLGRAGD 371
++ G +PD +F + AC G + +G F++M YG+ S Y ++++L G
Sbjct: 201 IEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGH 260
Query: 372 LKKAVEFIQSMPIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD------PNNAGRY 425
L +A++F++ M ++P ++ L+ C + +EL + AE + LD +NAG
Sbjct: 261 LDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAG-- 318
Query: 426 VILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELESGHRKFGANDESHPYSAQIF 485
++ A+ + A + R + IR++ K+ +F A D SH + F
Sbjct: 319 LVAAKASDSAMEKLKELRYCQMIRDDPKKR------------MHEFRAGDTSHLGTVSAF 366
Query: 486 ETLQ 489
+L+
Sbjct: 367 RSLK 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 27/230 (11%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVL---KACGAERASQKGH 137
D C V I+ EAL V D + G + +P +L K CG A ++
Sbjct: 85 DALCKQVKIR---------EALEVIDILEDKGYIVD---FPRLLGLAKLCGEVEALEEAR 132
Query: 138 AIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNG 197
+H C LD + ++ Y+ C+ + + VFNEMP+R+ +W +MI NG
Sbjct: 133 VVHD----CITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNG 188
Query: 198 YVDDAVLLFYDMFRH--DDIGAPDNATLVTVLPAFAQKADIHAGYW-IHCYIVKTGMKLD 254
+ A+ DMF ++ PD V A DI+ G GM L
Sbjct: 189 EGERAI----DMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLS 244
Query: 255 PNLGSGLISLYANCGYISMARAIFDRIS-DRTIFVWNAIIRCYGMHGHAQ 303
+I + A CG++ A +R++ + ++ +W ++ + G+ +
Sbjct: 245 MEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLE 294
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 167/405 (41%), Gaps = 50/405 (12%)
Query: 60 TLHSDSGLEYARKVFDKL----SARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP 115
T+ S + +A VF ++ + +VF +N++I+G+ G AL ++D+M G P
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 116 NRYTYPFVLKA-CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
N TY ++ C + + A+K GL+ +L N +++ + ++ V
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 175 FNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRH------------------ 212
EM +R D V++N++I GY G A+++ +M RH
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 213 -----------DDIGA----PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL 257
D + P+ T T++ F+QK ++ Y + + G
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 258 GSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+ LI+ + G + A A+ + + ++ + ++ ++ + EAL + +++V
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
+ G++PD + + L+ + DL++ M G+ E Y +++ GDL+
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 374 KAVEFIQSMP---IQPGKNVYGALLGACRIHKNIELAEFTAEKLF 415
KA++ M + P Y L+ A+ KLF
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/298 (19%), Positives = 115/298 (38%), Gaps = 57/298 (19%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
DV ++ V+ G+ EAL V EM G P+ TY +++ +R +++ ++
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTN 196
++ GL D F AL++ Y ++E + ++ NEM ++ D+V+++ +I+G
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
+A L +F + + P + T T
Sbjct: 569 SRTREAKRLLLKLFYEESV--PSDVTYHT------------------------------- 595
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
L NC I + ++I+ + M G EA +F+ ++
Sbjct: 596 -------LIENCSNIEFKSVV-------------SLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKK 374
+PDG + ++ AG + + + L++ M G +V L + G + +
Sbjct: 636 HKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
D L R++ +K D ++ +I+G+ EA ++Y+EM G P+ +TY +
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVS-FYAKCQEVEASR---KVFNEMP 179
+ A E +K +H V+ G+ D+ + L++ + + EA R K+F E
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 180 QRDIVSWN---------------SMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLV 224
V+++ S+I G+ G + +A +F M + PD
Sbjct: 587 VPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH--KPDGTAYN 644
Query: 225 TVLPAFAQKADIHAGYWIHCYIVKTGMKL 253
++ + DI Y ++ +VK+G L
Sbjct: 645 IMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 171/374 (45%), Gaps = 21/374 (5%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARD- 81
L +CK ++ ++A ++++ G D + L+D + D + A K F ++ +RD
Sbjct: 326 LCRICKLAEA-EEAFSEMIRQGILPDTVVYTTLIDGFCKRGD--IRAASKFFYEMHSRDI 382
Query: 82 ---VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
V + +I G+ +G EA ++ EM C G P+ T+ ++ +
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM----PQRDIVSWNSMISGYT 194
+H H ++ G ++ L+ K +++++ ++ +EM Q +I ++NS+++G
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
+G +++AV L + F + A D T T++ A+ + ++ I ++ G L
Sbjct: 503 KSGNIEEAVKLVGE-FEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG--LQ 558
Query: 255 PNLGSGLISLYANC--GYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSM 308
P + + + + C G + + + + + I +N++++ Y + + + A ++
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
++ + G+ PDG + L+ A + + W LFQ M+ G + S + Y+ ++ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 369 AGDLKKAVEFIQSM 382
+A E M
Sbjct: 679 RKKFLEAREVFDQM 692
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 155/382 (40%), Gaps = 52/382 (13%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAI 139
DV ++ V+ GY G + + + M+ G PN Y Y ++ C + ++ A
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI----VSWNSMISGYTT 195
++ G+ D V L+ + K ++ A+ K F EM RDI +++ ++ISG+
Sbjct: 340 -SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
G + +A LF++MF PD+ T ++ + + + + +H ++++ G +
Sbjct: 399 IGDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 256 NLGSGLISLYANCGYISMARAIFDRI----SDRTIFVWNAIIRCYGMHGHAQEALSM--- 308
+ LI G + A + + IF +N+I+ G+ +EA+ +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 309 --------------------------------FQQLVDAGLRPDGVVFLCLLSACSHAGM 336
++++ GL+P V F L++ GM
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 337 LAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGA 393
L G L M G+A + + +V +LK A + M + P Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 394 LL-GACRIHKNIELAEFTAEKL 414
L+ G C+ +N++ A F +++
Sbjct: 637 LVKGHCK-ARNMKEAWFLFQEM 657
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 26/283 (9%)
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA----TLVTVLPAFAQKADIH 237
D++S++++++GY G +D L M R G N+ +++ +L + A+
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRK---GLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTI----FVWNAII 293
+ +++ G+ D + + LI + G I A F + R I + AII
Sbjct: 337 EAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA 353
+ G EA +F ++ GL PD V F L++ AG + + + M G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGACRIHKNIE----- 405
+ Y ++D L + GDL A E + M +QP Y +++ NIE
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 406 LAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAI 448
+ EF A L + Y L Y +G+ A + K +
Sbjct: 514 VGEFEAAGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 171/374 (45%), Gaps = 21/374 (5%)
Query: 23 LLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARD- 81
L +CK ++ ++A ++++ G D + L+D + D + A K F ++ +RD
Sbjct: 326 LCRICKLAEA-EEAFSEMIRQGILPDTVVYTTLIDGFCKRGD--IRAASKFFYEMHSRDI 382
Query: 82 ---VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
V + +I G+ +G EA ++ EM C G P+ T+ ++ +
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM----PQRDIVSWNSMISGYT 194
+H H ++ G ++ L+ K +++++ ++ +EM Q +I ++NS+++G
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
+G +++AV L + F + A D T T++ A+ + ++ I ++ G L
Sbjct: 503 KSGNIEEAVKLVGE-FEAAGLNA-DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG--LQ 558
Query: 255 PNLGSGLISLYANC--GYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSM 308
P + + + + C G + + + + + I +N++++ Y + + + A ++
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 309 FQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGR 368
++ + G+ PDG + L+ A + + W LFQ M+ G + S + Y+ ++ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 369 AGDLKKAVEFIQSM 382
+A E M
Sbjct: 679 RKKFLEAREVFDQM 692
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 155/382 (40%), Gaps = 52/382 (13%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAI 139
DV ++ V+ GY G + + + M+ G PN Y Y ++ C + ++ A
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI----VSWNSMISGYTT 195
++ G+ D V L+ + K ++ A+ K F EM RDI +++ ++ISG+
Sbjct: 340 -SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
G + +A LF++MF PD+ T ++ + + + + +H ++++ G +
Sbjct: 399 IGDMVEAGKLFHEMFCKG--LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 256 NLGSGLISLYANCGYISMARAIFDRI----SDRTIFVWNAIIRCYGMHGHAQEALSM--- 308
+ LI G + A + + IF +N+I+ G+ +EA+ +
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 309 --------------------------------FQQLVDAGLRPDGVVFLCLLSACSHAGM 336
++++ GL+P V F L++ GM
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 337 LAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGA 393
L G L M G+A + + +V +LK A + M + P Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 394 LL-GACRIHKNIELAEFTAEKL 414
L+ G C+ +N++ A F +++
Sbjct: 637 LVKGHCK-ARNMKEAWFLFQEM 657
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 26/283 (9%)
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA----TLVTVLPAFAQKADIH 237
D++S++++++GY G +D L M R G N+ +++ +L + A+
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRK---GLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTI----FVWNAII 293
+ +++ G+ D + + LI + G I A F + R I + AII
Sbjct: 337 EAF---SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 294 RCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVA 353
+ G EA +F ++ GL PD V F L++ AG + + + M G +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 354 KSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGACRIHKNIE----- 405
+ Y ++D L + GDL A E + M +QP Y +++ NIE
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 406 LAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAI 448
+ EF A L + Y L Y +G+ A + K +
Sbjct: 514 VGEFEAAGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 10/298 (3%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
DV +N +I GY G AL V +MR G PN Y+Y ++ + + +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTN 196
GL + N L+S + K + + ++F EMP++ D+ ++NS+ISG
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
+ A+ L DM + + T T++ AF ++ +I + +V G LD
Sbjct: 508 DEIKHALWLLRDMISEGVVA--NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 257 LGSGLISLYANCGYISMARAIFDRI----SDRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
+ LI G + AR++F+++ + N +I G +EA+ +++
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAG 370
V G PD V F L++ AG + G +F+ ++ G+ + ++ L + G
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 151/347 (43%), Gaps = 15/347 (4%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY-PF 122
DS L R + + + +I + EAL + +EM G P+ T+
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
+L C +R ++ ++ ++ G D L++ K V+A++ +F +P+ +
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIR-GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
IV +N++I G+ T+G +DDA + DM I PD T +++ + ++ + +
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI-VPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANC--GYISMARAIFDRIS----DRTIFVWNAIIRCY 296
+ G K PN+ S I + C G I A + + +S +N +I +
Sbjct: 412 LHDMRNKGCK--PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSE 356
EA+ +F+++ G +PD F L+S + L + M + GV +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSMPIQ--PGKNV-YGALL-GACR 399
Y +++ R G++K+A + + M Q P + Y +L+ G CR
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 128/337 (37%), Gaps = 46/337 (13%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
+NVV++ + A NV+ +M P +T+ V+KA A ++
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM----PQRDIVSWNSMISGYTTNGYVD 200
K G + + L+ +KC V + ++ EM D ++N +I G ++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSG 260
+A + M APD DI GY L +G
Sbjct: 305 EAAKMVNRMLIRG--FAPD---------------DITYGY----------------LMNG 331
Query: 261 LISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA-GLRP 319
L + G + A+ +F RI I ++N +I + HG +A ++ +V + G+ P
Sbjct: 332 LCKI----GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 320 DGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFI 379
D + L+ G++ ++ M G + Y +VD + G + +A +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 380 QSMP---IQPGKNVYGALLGA-CRIHKNIELAEFTAE 412
M ++P + L+ A C+ H+ E E E
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 13/326 (3%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
+V +N VI G AL V+ M G + TY ++ +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV----SWNSMISGYTTN 196
VK +D ++ AL+ + K + +R ++ EM +R +V ++NS+I+G+ +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G + DA +F M PD T T++ F + + G + C + G+ D
Sbjct: 303 GCLGDAKYMFDLMVSKGCF--PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 257 LGSGLISLYANCGYISMARAIFDRISD----RTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
+ LI Y G +++A+ +F+R+ D I +N ++ C +G ++AL M + L
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
+ + D + + ++ L + W LF+++ GV Y ++ L R G
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 373 KKAVEFIQSMP---IQPGKNVYGALL 395
++A + + M P + +Y L
Sbjct: 481 READKLCRRMKEDGFMPSERIYDETL 506
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 123/336 (36%), Gaps = 79/336 (23%)
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
++ G+ F EA+++ D M G PN Y V+ R
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR---------------- 198
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFY 207
DL+ NAL FY C E + R D V++N++ISG + +G DA L
Sbjct: 199 -DLN----NALEVFY--CMEKKGIRA--------DAVTYNTLISGLSNSGRWTDAARLLR 243
Query: 208 DMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNL--GSGLISLY 265
DM + K+DPN+ + LI +
Sbjct: 244 DMVKR---------------------------------------KIDPNVIFFTALIDTF 264
Query: 266 ANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
G + AR ++ + R++ F +N++I + +HG +A MF +V G PD
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
V + L++ + + G LF M G+ Y ++ +AG L A +
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 382 MP---IQPGKNVYGALLGACRIHKNIELAEFTAEKL 414
M + P Y LL + IE A E L
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 12/172 (6%)
Query: 48 DPFIV--AKLVDKYTLHSDSGLEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEA 101
DP ++ L+D + + L AR ++ ++ R +VF +N +I G+ G +A
Sbjct: 251 DPNVIFFTALIDTFV--KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 102 LNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSF 161
++D M G P+ TY ++ + + G + GL D F N L+
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 162 YAKCQEVEASRKVFNEM----PQRDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
Y + ++ ++KVFN M DIV++N ++ NG ++ A+++ D+
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 144/328 (43%), Gaps = 15/328 (4%)
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAIH 140
V +N +I G +ALN++ EM G PN TY ++ C R S +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL- 314
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTN 196
++ ++ D+F +AL+ + K ++ + K+++EM +R IV+++S+I+G+ +
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
+D+A +F M PD T T++ F + + G + + + G+ +
Sbjct: 375 DRLDEAKQMFEFMVSKHCF--PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 432
Query: 257 LGSGLISLYANCGYISMARAIF-DRISD---RTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
+ LI G MA+ IF + +SD I +N ++ +G ++A+ +F+ L
Sbjct: 433 TYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
+ + P + ++ AG + GWDLF + GV Y ++ R G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 373 KKAVEFIQSMP---IQPGKNVYGALLGA 397
++A + M P Y L+ A
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 150/337 (44%), Gaps = 26/337 (7%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
++ + ++ GY + +EA+ + D+M G PN T+ ++ + + A+
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD----IVSWNSMISGYTTN 196
V G DL +V+ K + + + + N+M Q ++ +N++I G
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDN----ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
++DDA+ LF +M + G N ++L++ L + + +D A + I + K
Sbjct: 270 KHMDDALNLFKEM---ETKGIRPNVVTYSSLISCLCNYGRWSD--ASRLLSDMIER---K 321
Query: 253 LDPNLG--SGLISLYANCGYISMARAIFD----RISDRTIFVWNAIIRCYGMHGHAQEAL 306
++P++ S LI + G + A ++D R D +I ++++I + MH EA
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
MF+ +V PD V + L+ + +G ++F+ M G+ + Y ++ L
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 367 GRAGDLKKAVEFIQSM---PIQPGKNVYGALL-GACR 399
+AGD A E + M + P Y LL G C+
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 186/422 (44%), Gaps = 31/422 (7%)
Query: 4 VSRRLQQISVLRDSFYYTDLLH-LCKTTDSIKKAHAQVVVG-----GHEQDPFIVAKLVD 57
+ ++Q + + + + Y+ L++ C+ + + A V+G G+E + ++ L++
Sbjct: 103 LGEQMQNLGIPHNHYTYSILINCFCRRS---QLPLALAVLGKMMKLGYEPNIVTLSSLLN 159
Query: 58 KYTLHS---DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTT 114
Y HS + ++F + +N +I G +EA+ + D M G
Sbjct: 160 GYC-HSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ 218
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
P+ TY V+ + + + L+ + + N ++ K + ++ + +
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 175 FNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAF 230
F EM + ++V+++S+IS G DA L DM PD T ++ AF
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI--NPDVFTFSALIDAF 336
Query: 231 AQKADIHAGYWIHCYIVKTGMKLDPNLG--SGLISLYANCGYISMARAIFDRISDRTIF- 287
++ + ++ +VK +DP++ S LI+ + + A+ +F+ + + F
Sbjct: 337 VKEGKLVEAEKLYDEMVKRS--IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 288 ---VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
+N +I+ + + +E + +F+++ GL + V + L+ AG ++F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 345 QTMETYGVAKSEAHYACIVDLLGRAGDLKKAV---EFIQSMPIQPGKNVYGALL-GACRI 400
+ M + GV + Y ++D L + G L+KA+ E++Q ++P Y ++ G C+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 401 HK 402
K
Sbjct: 515 GK 516
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 162/391 (41%), Gaps = 26/391 (6%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK-GHAIHGHA 143
++ ++ A + F +++ ++M+ G N YTY +L C R+ A+ G
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS-ILINCFCRRSQLPLALAVLGKM 142
Query: 144 VKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM----PQRDIVSWNSMISGYTTNGYV 199
+K G + ++ ++L++ Y + + + + ++M Q + V++N++I G +
Sbjct: 143 MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA 202
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
+A+ L M PD T V+ ++ D + + + + KL+P +
Sbjct: 203 SEAMALIDRMVAKG--CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG--KLEPGVLI 258
Query: 260 GLISLYANCGYISM--ARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+ C Y M A +F + + + ++++I C +G +A + ++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVD---LLGRAG 370
+ + PD F L+ A G L + L+ M + S Y+ +++ + R
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 371 DLKKAVEFIQSMPIQPGKNVYGALL-GAC---RIHKNIELAEFTAEKLFVLDPNNAGRYV 426
+ K+ EF+ S P Y L+ G C R+ + +E+ +++ V N Y
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV---GNTVTYN 435
Query: 427 ILAQMYEDAGQWQDAARVRKAIRENDIKKPI 457
IL Q AG A + K + + + I
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 144/329 (43%), Gaps = 40/329 (12%)
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK 145
N +IK + +G E L V+ +M+ G P YTY F++
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMN-------------------- 230
Query: 146 CGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLL 205
GL +FV +A F EV S ++ + DIV++N+MI GY G A+
Sbjct: 231 -GLVSAMFVDSAERVF-----EVMESGRI-----KPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 206 FYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLY 265
DM D T +T++ A +D + ++ + + G+++ P+ S +I
Sbjct: 280 LRDMETRGH--EADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 266 ANCGYISMARAIFDRI----SDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDG 321
G ++ +F+ + S + ++ +I Y G ++A+ + +++D G +PD
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 322 VVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQS 381
V + +++ G + + D F T G+A + Y+ ++D LG+AG + +A +
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 382 MPIQPGKN---VYGALLGACRIHKNIELA 407
M + Y AL+ A H+ ++ A
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 158/368 (42%), Gaps = 25/368 (6%)
Query: 67 LEYARKVFDKLSA----RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
++ A +VF+ + + D+ +N +IKGY G +A+ +M G ++ TY
Sbjct: 238 VDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMT 297
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR- 181
+++AC A+ A++ + G+ + + ++ K ++ VF M ++
Sbjct: 298 MIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKG 357
Query: 182 ---DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
++ + +I GY +G V+DA+ L + M D+ PD T V+ + +
Sbjct: 358 SKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI--DEGFKPDVVTYSVVVNGLCKNGRVEE 415
Query: 239 G--YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD----RTIFVWNAI 292
Y+ C G+ ++ S LI G + A +F+ +S+ R + +NA+
Sbjct: 416 ALDYFHTCRF--DGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 293 IRCYGMHGHAQEALSMFQQL-VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG 351
I + H EA+++F+++ + G + LLS + L+ M G
Sbjct: 474 IDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG 533
Query: 352 VAKSEAHYACIVDLLGRAGDLKKAVEFIQSM-PI-----QPGKNVYGALLGACRIHKNIE 405
+ + A + + L +G + +A + + + P+ +++ L A RI + +
Sbjct: 534 ITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACK 593
Query: 406 LAEFTAEK 413
LA+ E+
Sbjct: 594 LADGITER 601
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 37 HA-QVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANV 95
HA +V+GG ++ KL + YT+ + + K S +V + V+I GYA
Sbjct: 328 HAFSLVIGGLCKE----GKLNEGYTVFEN--------MIRKGSKPNVAIYTVLIDGYAKS 375
Query: 96 GPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAIHGHAVKCGLDLDLFV 154
G +A+ + M G P+ TY V+ C R + H GL ++
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD-GLAINSMF 434
Query: 155 GNALVSFYAKCQEVEASRKVFNEMPQ----RDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
++L+ K V+ + ++F EM + RD +N++I +T + VD+A+ LF M
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 147/331 (44%), Gaps = 14/331 (4%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D+ +N +I Y++ G EA + + M G +P YTY V+ ++ +
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVS----WNSMISGYTTN 196
++ GL D +L+ K +V + KVF++M RD+V ++SM+S +T +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G +D A++ F + I PDN ++ + +K I + +++ G +D
Sbjct: 389 GNLDKALMYFNSVKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 257 LGSGLISLYANCGYISMARAIFDRISDRTIF----VWNAIIRCYGMHGHAQEALSMFQQL 312
+ ++ + A +F+ +++R +F +I + G+ Q A+ +FQ++
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
+ +R D V + LL G + +++ M + + + Y+ +V+ L G L
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 373 KKAVEFIQSM---PIQPGKNVYGALL-GACR 399
+A M I+P + +++ G CR
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 129/305 (42%), Gaps = 10/305 (3%)
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK 145
N +I +G A VY E+ +G N YT ++ A + +K +
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 146 CGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDD 201
G+ D+ N L+S Y+ +E + ++ N MP + + ++N++I+G +G +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
A +F +M R +PD+ T ++L +K D+ + + + D S +
Sbjct: 324 AKEVFAEMLRSG--LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 262 ISLYANCGYISMARAIFDRISDRTIF----VWNAIIRCYGMHGHAQEALSMFQQLVDAGL 317
+SL+ G + A F+ + + + ++ +I+ Y G A+++ +++ G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 318 RPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
D V + +L ML + LF M + ++D + G+L+ A+E
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 378 FIQSM 382
Q M
Sbjct: 502 LFQKM 506
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/424 (17%), Positives = 169/424 (39%), Gaps = 64/424 (15%)
Query: 19 YYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIV--AKLVDKYTLHS--DSGLEYARKVF 74
Y + L+ CK D ++ + + P +V + ++ +T D L Y V
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 75 DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQ 134
+ D + ++I+GY G + A+N+ +EM G + TY +L +
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMI 190
+ + + L D + L+ + K ++ + ++F +M ++ D+V++N+++
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 191 SGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTG 250
G+ G +D A ++ DM + + P + ++
Sbjct: 523 DGFGKVGDIDTAKEIWADMVSKEILPTPISYSI--------------------------- 555
Query: 251 MKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEAL 306
L++ + G+++ A ++D + + T+ + N++I+ Y G+A +
Sbjct: 556 ----------LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETY--GVAKSEAHYACIVD 364
S ++++ G PD + + L+ +++ + L + ME G+ Y I+
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 365 LLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLG----------ACRIHKNIELAEFTA 411
R +K+A ++ M + P ++ Y ++ A RIH + F+
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 412 EKLF 415
+ F
Sbjct: 726 DDKF 729
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 162/392 (41%), Gaps = 18/392 (4%)
Query: 1 MRGVSRRLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYT 60
++G++ L +S++ + F C+ A +++ G+E + + L++
Sbjct: 116 LKGIAHNLYTLSIMINCFCR------CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLC 169
Query: 61 LHS--DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRY 118
L LE ++ + D+ N ++ G G AEA+ + D+M G PN
Sbjct: 170 LEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 229
Query: 119 TYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM 178
TY VL + + + + LD + ++ K ++ + +FNEM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 179 PQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKA 234
+ +I+++N +I G+ G DD L DM + P+ T ++ +F ++
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI--NPNVVTFSVLIDSFVKEG 347
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRI----SDRTIFVWN 290
+ +H ++ G+ D + LI + ++ A + D + D I +N
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 291 AIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETY 350
+I Y + L +F+++ G+ D V + L+ G L +LFQ M +
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 351 GVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
V + Y ++D L G+ +KA+E + +
Sbjct: 468 KVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 141/326 (43%), Gaps = 12/326 (3%)
Query: 66 GLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
+E RK+ ++ D ++++I G G A N+++EM G T N TY ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 126 A-CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR--- 181
C A R G + +K ++ ++ + L+ + K ++ + ++ EM R
Sbjct: 307 GFCNAGRWDD-GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 182 -DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
D +++ S+I G+ ++D A + M P+ T ++ + + I G
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKG--CDPNIRTFNILINGYCKANRIDDGL 423
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCY 296
+ + G+ D + LI + G +++A+ +F + R I + ++
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSE 356
+G +++AL +F+++ + + D ++ ++ +A + WDLF ++ GV
Sbjct: 484 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 543
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSM 382
Y ++ L + G L +A + M
Sbjct: 544 KTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 135/320 (42%), Gaps = 11/320 (3%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
D G + R + + +V ++V+I + G EA ++ EM G P+ TY +
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-- 181
+ E K + + V G D ++ N L++ Y K ++ ++F +M R
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 182 --DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAG 239
D V++N++I G+ G ++ A LF +M P+ T +L +
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK--VPPNIVTYKILLDGLCDNGESEKA 492
Query: 240 YWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRC 295
I I K+ M+LD + + +I N + A +F + + + +N +I
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 296 YGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKS 355
G EA +F+++ + G PDG + L+ A G + L + ++ G +
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Query: 356 EAHYACIVDLLGRAGDLKKA 375
+ ++D+L G LKK+
Sbjct: 613 ASTIKMVIDMLS-DGRLKKS 631
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 142/330 (43%), Gaps = 18/330 (5%)
Query: 67 LEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
L+ A +F+++ + ++ +N++I G+ N G + + + +M PN T+
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR- 181
++ + E ++ +H + G+ D +L+ + K ++ + ++ + M +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 182 ---DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
+I ++N +I+GY +DD + LF M + D T T++ F + ++
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA--DTVTYNTLIQGFCELGKLNV 456
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANC--GYISMARAIFDRIS----DRTIFVWNAI 292
+ +V K+ PN+ + I L C G A IF++I + I ++N I
Sbjct: 457 AKELFQEMVSR--KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514
Query: 293 IRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
I +A +F L G++P + ++ G L++ LF+ ME G
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
A Y ++ GD K+V+ I+ +
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 114/284 (40%), Gaps = 28/284 (9%)
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
DDA+ LF DM + P + A A+ + + G+ + S
Sbjct: 70 DDAIDLFRDMIHSRPL--PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 260 GLISLYANCGYISMARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+I+ + C + +A + +I + ++ +I + G EAL + ++V+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
G +PD + L++ +G A+ L M YG + Y +++++ ++G A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 376 VEFIQSMP-------------IQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNA 422
+E ++ M I G +G+L A + +E+ T N
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT---------NI 298
Query: 423 GRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELES 466
Y IL + +AG+W D A++ + + + I + SV ++S
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 175/415 (42%), Gaps = 29/415 (6%)
Query: 4 VSRRLQQISVLRDSFYYTDLLH-LC--KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYT 60
+ +R+ D YT L+ LC + D K+ ++ G H+ D L+D+++
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFS 339
Query: 61 LHSDSGLEYARKVFDKLS----ARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPN 116
+ D L+ ++ + ++ DV + +++ G F EA + D MR G PN
Sbjct: 340 DNRD--LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 117 RYTYPFVLKACGAERASQKGHAIH--GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKV 174
+TY ++ CG R + A+ G+ G+ + + +Y K + ++ +
Sbjct: 398 LHTYNTLI--CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 175 FNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPA 229
F +M + +IV+ N+ + G +A +FY + DIG PD+ T ++
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL---KDIGLVPDSVTYNMMMKC 512
Query: 230 FAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----T 285
+++ +I + +++ G + D + + LI+ + A +F R+ + T
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 286 IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
+ +N ++ G +G QEA+ +F+ +V G P+ + F L + +
Sbjct: 573 VVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLF 632
Query: 346 TMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALLGACRI 400
M G Y I+ L + G +K+A+ F M K VY + C +
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK----KLVYPDFVTLCTL 683
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 138/331 (41%), Gaps = 17/331 (5%)
Query: 68 EYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKAC 127
E +++ D+ DV + V+I A V+++M+ P+R TY +L
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 128 GAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV--- 184
R K G D+ LV K + + M + I+
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 185 -SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWI 242
++N++I G +DDA+ LF +M + +G P T + + + + D +
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNM---ESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 243 HCYIVKTGMKLDPNLGSGLISLY--ANCGYISMARAIFDRISDRTIF----VWNAIIRCY 296
+ G+ PN+ + SLY A G A+ IF + D + +N +++CY
Sbjct: 456 FEKMKTKGIA--PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSE 356
G EA+ + ++++ G PD +V L++ A + + W +F M+ + +
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSMPIQPG 387
Y ++ LG+ G +++A+E + M +Q G
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGM-VQKG 603
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 155/393 (39%), Gaps = 58/393 (14%)
Query: 8 LQQISVLRDSFYYTDLLHLCKTTDSIKKA---HAQVVVGGHEQDPFIVAKLVDKYTLHSD 64
L+ I ++ DS Y ++ I +A ++++ G E D +V L++ TL+
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN--TLYKA 551
Query: 65 SGLEYARKVFDKLSARD----VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
++ A K+F ++ V +N ++ G G EA+ +++ M G PN T+
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
N L K EV + K+ +M
Sbjct: 612 -----------------------------------NTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 181 R----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADI 236
D+ ++N++I G NG V +A+ F+ M + + PD TL T+LP + + I
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK---LVYPDFVTLCTLLPGVVKASLI 693
Query: 237 HAGYWI------HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWN 290
Y I +C + + +GS L + R + + I +
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753
Query: 291 AIIRCYGMHGHAQEALSMFQQLV-DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET 349
IIR H + A ++F++ D G++P + L+ A M+ D+F +++
Sbjct: 754 PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 350 YGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G A Y ++D G++G + + E + M
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 132/339 (38%), Gaps = 80/339 (23%)
Query: 70 ARKVFDKLSAR-----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVL 124
AR +F+K + + +N++I G A +V+ +++ G P+ TY F+L
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 125 KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----Q 180
A Y K +++ +++ EM +
Sbjct: 828 DA-----------------------------------YGKSGKIDELFELYKEMSTHECE 852
Query: 181 RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
+ ++ N +ISG G VDDA+ L+YD+ D +P T ++ ++ ++
Sbjct: 853 ANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF-SPTACTYGPLIDGLSKSGRLYEAK 911
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHG 300
+ ++ G + NC ++N +I +G G
Sbjct: 912 QLFEGMLDYGCR-------------PNCA------------------IYNILINGFGKAG 940
Query: 301 HAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYA 360
A A ++F+++V G+RPD + L+ G + +G F+ ++ G+ Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 361 CIVDLLGRAGDLKKAVEFIQSMP----IQPGKNVYGALL 395
I++ LG++ L++A+ M I P Y +L+
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 40/255 (15%)
Query: 74 FDKLSARD----VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGA 129
+D +S RD + +I G + G EA +++ M G PN Y ++ G
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVS 185
+ A+ VK G+ DL + LV V+ F E+ + D+V
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
+N +I+G + +++A++LF +M I PD T +++ + I+
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGI-TPDLYTYNSLILNLGIAGMVEEAGKIYNE 1057
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEA 305
I + G L+PN +F +NA+IR Y + G + A
Sbjct: 1058 IQRAG--LEPN-----------------------------VFTFNALIRGYSLSGKPEHA 1086
Query: 306 LSMFQQLVDAGLRPD 320
+++Q +V G P+
Sbjct: 1087 YAVYQTMVTGGFSPN 1101
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCA-GTTPNRYTYPF 122
D GL Y +++ + DV C+N++I G EAL +++EM+ + G TP+ YTY
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM 178
++ G ++ I+ + GL+ ++F NAL+ Y+ + E + V+ M
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 122/313 (38%), Gaps = 23/313 (7%)
Query: 99 AEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNAL 158
EA+ VY M G P+ TY ++ G R + GL +++
Sbjct: 205 TEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 159 VSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMF--RH 212
+ + ++ + ++ M D+V++ +I T +D A +F M RH
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 213 DDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYIS 272
PD T +T+L F+ D+ + + K G D + L+ G
Sbjct: 325 ----KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFG 380
Query: 273 MARAIFDRISDRTIF----VWNAIIRCYGMHGH-AQEALSMFQQLVDAGLRPDGVVFLCL 327
A D + D+ I +N +I C + H +AL +F + G++P ++
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLI-CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVF 439
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDL--LGRAGDLKKAVEF---IQSM 382
+ +G + F+ M+T G+A + AC L L +AG ++A + ++ +
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIV--ACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 383 PIQPGKNVYGALL 395
+ P Y ++
Sbjct: 498 GLVPDSVTYNMMM 510
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 118/297 (39%), Gaps = 24/297 (8%)
Query: 101 ALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVS 160
+ + EM G PN YT+ ++ G + + I G D+ L+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 161 FYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
++++ +++VF +M + D V++ +++ ++ N +D + +M D
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM--EKDGH 359
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS--GLISLYANCGYISMA 274
PD T ++ A + + G V + PNL + LI CG + +
Sbjct: 360 VPDVVTFTILVDALCKAGNF--GEAFDTLDVMRDQGILPNLHTYNTLI-----CGLLRVH 412
Query: 275 R-----AIFDRISD----RTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
R +F + T + + I YG G + AL F+++ G+ P+ V
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 326 CLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
L + + AG + +F ++ G+ Y ++ + G++ +A++ + M
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 165/373 (44%), Gaps = 29/373 (7%)
Query: 101 ALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAIHGHAVKCGLDLDLFVGNALV 159
AL+VYD+M +P+ +T V+ A C + + GL+L++ N+L+
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 160 SFYAKCQEVEASRKVFNEMPQ----RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
+ YA +VE +V M + R++V++ S+I GY G +++A +F ++ + +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKEKKL 327
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
A D ++ + + I +H +++ G++ + + + LI+ Y G + A
Sbjct: 328 VA-DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 276 AIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
IF R++D ++ +N ++ Y G+ EAL + Q+ + P + + LL
Sbjct: 387 QIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGY 446
Query: 332 SHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM----PIQPG 387
S G L++ M GV E + +++ L + GD +A++ +++ +
Sbjct: 447 SRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDT 506
Query: 388 KNVYGALLGACRIHKNIELAEFTAEKLFVLDPNNAGR-------YVILAQMYEDAGQWQD 440
+ + G C++ K E E +LD N R Y L+ Y G ++
Sbjct: 507 ITLNVMISGLCKMEKVNEAKE-------ILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 441 AARVRKAIRENDI 453
A V++ + I
Sbjct: 560 AFAVKEYMERKGI 572
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 76 KLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGT-TPNRYTYPFVLKACGAERASQ 134
KL + +NV I G G +A ++ ++ + P+ YTY ++ C
Sbjct: 713 KLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN 772
Query: 135 KGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI----VSWNSMI 190
K + G+ ++ NAL+ K V+ ++++ +++PQ+ I +++N++I
Sbjct: 773 KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Query: 191 SGYTTNGYVDDAVLLFYDMFRHDDIGAPD 219
G +G V +A+ L M + D
Sbjct: 833 DGLVKSGNVAEAMRLKEKMIEKGLVRGSD 861
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 170/444 (38%), Gaps = 56/444 (12%)
Query: 35 KAHAQVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLS----ARDVFCWNVVIK 90
+ H ++ G + I L++ Y L A ++F +++ D +N ++
Sbjct: 352 RVHDNMIEIGVRTNTTICNSLINGYC--KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 91 GYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDL 150
GY G EAL + D+M P TY +LK A ++ +K G++
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNA 469
Query: 151 DLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLF 206
D + L+ K + + K++ + R D ++ N MISG V++A +
Sbjct: 470 DEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 207 YDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA 266
DN + PA + GY+ K G L +A
Sbjct: 530 ------------DNVNIFRCKPAVQTYQALSHGYY------KVG---------NLKEAFA 562
Query: 267 NCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
Y+ + IF TI ++N +I + H + + +L GL P +
Sbjct: 563 VKEYME-RKGIFP-----TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGA 616
Query: 327 LLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP--- 383
L++ + GM+ + + M G+ + + I + L R + +A +Q +
Sbjct: 617 LITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFD 676
Query: 384 -IQPGKNVYGALL--GACRIHKNIELAE----FTAEKLFVLDPNNAGRYVILAQMYEDAG 436
+ PG L A K ++AE T +KL V PNN V +A + + AG
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLV--PNNIVYNVAIAGLCK-AG 733
Query: 437 QWQDAARVRKAIRENDIKKPIGYS 460
+ +DA ++ + +D P Y+
Sbjct: 734 KLEDARKLFSDLLSSDRFIPDEYT 757
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 165/375 (44%), Gaps = 21/375 (5%)
Query: 39 QVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSA----RDVFCWNVVIKGYAN 94
++V G + D F +V+ D ++ A + K+ DV + +I N
Sbjct: 210 RMVARGCQPDLFTYGTVVNGLCKRGD--IDLALSLLKKMEKGKIEADVVIYTTIIDALCN 267
Query: 95 VGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAIHGHAVKCGLDLDLF 153
+ALN++ EM G PN TY +++ C R S + ++ ++ ++
Sbjct: 268 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL-SDMIERKINPNVV 326
Query: 154 VGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDM 209
+AL+ + K ++ + K+++EM +R DI +++S+I+G+ + +D+A +F M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCG 269
D P+ T T++ F + + G + + + G+ + + LI G
Sbjct: 387 ISKDCF--PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 270 YISMARAIFDR-ISDRT---IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFL 325
MA+ IF + +SD I ++ ++ +G ++AL +F+ L + + PD +
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 326 CLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP-- 383
++ AG + GWDLF ++ GV + Y ++ R G ++A + M
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 384 -IQPGKNVYGALLGA 397
P Y L+ A
Sbjct: 565 GTLPNSGTYNTLIRA 579
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 149/340 (43%), Gaps = 26/340 (7%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D+ + ++ GY + +EA+ + D+M PN T+ ++ + + A+
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTN 196
V G DLF +V+ K +++ + + +M + D+V + ++I
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 197 GYVDDAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM---K 252
V+DA+ LF +M D+ G P+ T +++ + G W + + M K
Sbjct: 269 KNVNDALNLFTEM---DNKGIRPNVVTYNSLIRCLC-----NYGRWSDASRLLSDMIERK 320
Query: 253 LDPNLG--SGLISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEAL 306
++PN+ S LI + G + A ++D + R+I F ++++I + MH EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
MF+ ++ P+ V + L+ A + +G +LF+ M G+ + Y ++ L
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 367 GRAGDLKKAVEFIQSMP---IQPGKNVYGALL-GACRIHK 402
+AGD A + + M + P Y LL G C+ K
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 162/394 (41%), Gaps = 21/394 (5%)
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE-RASQKGHAIHG 141
+ +N +I Y G EA + M G P T+ ++ G + + +
Sbjct: 299 YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT 358
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNG 197
+ C D + N L+S + K ++E + F EM + D VS+ +++ ++
Sbjct: 359 MKLHCAPDTRTY--NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRH 416
Query: 198 YVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY-WIHCYIVKTGMKLDPN 256
V++A L +M DD D T + + + + + W + V M +
Sbjct: 417 MVEEAEGLIAEM--DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGY 474
Query: 257 LGSGLISLYANCGYISMARAIF---DRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
S I Y GY+S A +F ++ RT+ +N +I+ YG+ ++A +F+ ++
Sbjct: 475 --SANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMM 532
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
G+ PD + L+ + A M +G + M G Y ++ + G L
Sbjct: 533 SYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLN 592
Query: 374 KAVEFIQSM---PIQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLD-PNNAGRYVILA 429
A E + M I+P VYG L+ A N++ A E + P N+ Y L
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 430 QMYEDAGQWQDAARV-RKAIRE-NDIKKPIGYSS 461
++Y G +A + RK ++ N + P Y+S
Sbjct: 653 KLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 148/330 (44%), Gaps = 17/330 (5%)
Query: 67 LEYARKVF---DKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
L A +VF +++ R V +NV+IK Y +A +++ M G TP++ TY +
Sbjct: 487 LSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 546
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP---- 179
++ + KG + G D A++S + K ++ + +V+ EM
Sbjct: 547 VQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNI 606
Query: 180 QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLV-TVLPAFAQKADIHA 238
+ D+V + +I+ + G V A+ M + G P N+ + +++ + + +
Sbjct: 607 EPDVVVYGVLINAFADTGNVQQAMSYVEAM---KEAGIPGNSVIYNSLIKLYTKVGYLDE 663
Query: 239 GYWIHCYIVKTGMKL---DPNLGSGLISLYANCGYISMARAIFDRISDR---TIFVWNAI 292
I+ ++++ K D + +I+LY+ + A AIFD + R F + +
Sbjct: 664 AEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMM 723
Query: 293 IRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
+ Y +G +EA + +Q+ + + D + + +L + G + + F+ M + G+
Sbjct: 724 LCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGI 783
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
++ + + +L + G KKAV I+ +
Sbjct: 784 QPDDSTFKSLGTILMKLGMSKKAVRKIEEI 813
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/432 (19%), Positives = 167/432 (38%), Gaps = 85/432 (19%)
Query: 79 ARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
A D +N++I + A + EM+ G P+ +Y +L A ++
Sbjct: 364 APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEAS--------------------------- 171
+ +++D + +AL Y + + +E S
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGE 483
Query: 172 -------RKVF---NEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA 221
+VF E+ +R ++ +N MI Y + + A LF M + PD
Sbjct: 484 RGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYG--VTPDKC 541
Query: 222 TLVTVLPAFAQKADIHAGYWIHCYIVK---TGMKLDPNLGSGLISLYANCGYISMARAIF 278
T T++ A H G CY+ K TG D +IS + G ++MA ++
Sbjct: 542 TYNTLVQILASADMPHKG---RCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 279 DRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+ + I V+ +I + G+ Q+A+S + + +AG+ + V++ L+ +
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 335 GMLAQGWDLFQT-METYGVAKSEAHYA--CIVDLLGRAGDLKKAVEFIQSMPIQPGKNVY 391
G L + +++ +++ + Y C+++L ++KA SM Q G
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK-QRG---- 713
Query: 392 GALLGACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIREN 451
E EFT + ++ MY+ G++++A ++ K +RE
Sbjct: 714 -------------EANEFT--------------FAMMLCMYKKNGRFEEATQIAKQMREM 746
Query: 452 DI-KKPIGYSSV 462
I P+ Y+SV
Sbjct: 747 KILTDPLSYNSV 758
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 150/345 (43%), Gaps = 32/345 (9%)
Query: 44 GHEQDPFIVAKLVDKYT-----LHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPF 98
G+ D I LVD + LH+ + ++ K+ + +V +N +I G+ + F
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHA---MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 99 AEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK------GHAIHGHAVKCGLDLDL 152
EAL V+ M G P+ T+ V++ E A K G + + + D+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADI 572
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEM----PQRDIVSWNSMISGYTTNGYVDDAVLLFYD 208
V N ++ KC +E + K FN + + DIV++N+MI GY + +D+A +F +
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-E 631
Query: 209 MFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC 268
+ + G P+ TL ++ + D+ + + + G K + L+ ++
Sbjct: 632 LLKVTPFG-PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 269 GYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVF 324
I + +F+ + ++ +I ++ II G EA ++F Q +DA L PD V +
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Query: 325 LCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRA 369
L+ G L + L++ M GV DLL RA
Sbjct: 751 AILIRGYCKVGRLVEAALLYEHMLRNGVKPD--------DLLQRA 787
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/466 (20%), Positives = 172/466 (36%), Gaps = 57/466 (12%)
Query: 44 GHEQDPFIVAKLVDKYTLHSDSGLEYA--RKVFDKLSARDVFCWNVVIKGYANVGPFAEA 101
G E D + L+D Y G+ + + K DV ++ I Y G A A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375
Query: 102 LNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSF 161
VY M C G +PN TY ++K + + ++G +K G++ + ++L+
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDG 435
Query: 162 YAKCQEVEA---------------------------------------SRKVFNEMPQRD 182
+ KC + + S K+ + + +
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVL------PAFAQKADI 236
+V +NS+I G+ D+A+ +F M + PD AT TV+ AF +
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI--KPDVATFTTVMRVSIMEDAFCKHMKP 553
Query: 237 HAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRI----SDRTIFVWNAI 292
G + + + + D + + +I L C I A F+ + + I +N +
Sbjct: 554 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 613
Query: 293 IRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
I Y EA +F+ L P+ V L+ + +F M G
Sbjct: 614 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 353 AKSEAHYACIVDLLGRAGDLK---KAVEFIQSMPIQPGKNVYGALL-GACRIHKNIELAE 408
+ Y C++D ++ D++ K E +Q I P Y ++ G C+ + E
Sbjct: 674 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 733
Query: 409 FTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIK 454
+ + + Y IL + Y G+ +AA + + + N +K
Sbjct: 734 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 109/251 (43%), Gaps = 12/251 (4%)
Query: 153 FVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRH 212
FV +AL + ++ R V + IVS N ++ G + + + LL +
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVL--- 278
Query: 213 DDIG-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
D G AP+ T T++ F ++ ++ + + + + G++ D S LI Y G +
Sbjct: 279 -DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 272 SMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
M +F + + + V+++ I Y G A ++++++ G+ P+ V + L
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAV---EFIQSMPI 384
+ G + + + ++ + G+ S Y+ ++D + G+L+ E + M
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 385 QPGKNVYGALL 395
P +YG L+
Sbjct: 458 PPDVVIYGVLV 468
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 155/353 (43%), Gaps = 18/353 (5%)
Query: 43 GGHEQDPFIVAKLVD---KYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFA 99
G E D I + ++D KY H D L ++ +K DVF ++ +I N G ++
Sbjct: 234 GKIEADVVIYSTVIDSLCKYR-HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 292
Query: 100 EALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALV 159
+A + +M PN T+ ++ A E + + ++ +D ++ N+L+
Sbjct: 293 DASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
Query: 160 SFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
+ + ++ ++++F M + D+V++N++I+G+ V D + LF DM R +
Sbjct: 353 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC--GYISM 273
G + T T++ F Q +D + +V G+ PN+ + L C G +
Sbjct: 413 G--NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH--PNIMTYNTLLDGLCKNGKLEK 468
Query: 274 ARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
A +F+ + + I+ +N + G ++ +F L G++PD + + ++S
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 330 ACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G+ + + LF M+ G Y ++ R GD + E I+ M
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 191/439 (43%), Gaps = 37/439 (8%)
Query: 65 SGLEYARKVFDKLS----ARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY 120
S L +A + K+ + N ++ G+ + +EA+ + D+M G P+ T+
Sbjct: 114 SQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTF 173
Query: 121 PFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP- 179
++ + + A+ V G DL A+++ K E + + + N+M
Sbjct: 174 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 180 ---QRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKAD 235
+ D+V ++++I +VDDA+ LF +M D+ G PD T +++
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM---DNKGIRPDVFTYSSLISCLC---- 286
Query: 236 IHAGYWIHCYIVKTGM---KLDPNLGS--GLISLYANCGYISMARAIFDRISDRTI---- 286
+ G W + + M K++PN+ + LI +A G + A +FD + R+I
Sbjct: 287 -NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 287 FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQT 346
+N++I + MH EA +F +V PD V + L++ A + G +LF+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 347 METYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALL-GACRIHK 402
M G+ + Y ++ +A D A + M + P Y LL G C+ K
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Query: 403 NIELAEFTAEKL--FVLDPNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKP-IGY 459
+E A E L ++P + Y I+++ AG+ +D + ++ +K I Y
Sbjct: 466 -LEKAMVVFEYLQKSKMEP-DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 460 SSVELESGHRKFGANDESH 478
++ + SG K G +E++
Sbjct: 524 NT--MISGFCKKGLKEEAY 540
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 42/386 (10%)
Query: 44 GHEQDPFIVAKLVDKYTLHS--DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEA 101
G+E D + LV+ + L + ++ + D+ + +I G G +EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 102 LNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLF-------V 154
L + D M G P+ TY VL R + G++ L LDLF +
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLN-----RLCKSGNS--------ALALDLFRKMEERNI 241
Query: 155 GNALVSFY----AKCQE--VEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVL 204
++V + + C++ + + +FNEM + D+V+++S+I G +G DD
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 205 LFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISL 264
+ +M + I PD T ++ F ++ + ++ ++ G+ D + LI
Sbjct: 302 MLREMIGRNII--PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 265 YANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
+ + A +FD + + I ++ +I Y + + +F+++ GL P+
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQ 380
+ + L+ +G L +LFQ M + GV S Y ++D L G+L KA+E +
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 381 SMP---IQPGKNVYGALL-GACRIHK 402
M + G +Y ++ G C K
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASK 505
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 152/340 (44%), Gaps = 20/340 (5%)
Query: 60 TLHSDSGLEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP 115
+L D + A +F+++ + DV ++ +I G N G + + + EM P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 116 NRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVF 175
+ T+ ++ E + ++ + G+ D N+L+ + K + + ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 176 NEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA 231
+ M + DIV+++ +I+ Y VDD + LF ++ I P+ T T++ F
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI--PNTITYNTLVLGFC 431
Query: 232 QKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC--GYISMARAIFDRISDRT---- 285
Q ++A + +V G+ P++ + I L C G ++ A IF+++
Sbjct: 432 QSGKLNAAKELFQEMVSRGVP--PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 286 IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQ 345
I ++N II +A S+F L D G++PD V + ++ G L++ LF+
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
Query: 346 TMETYGVAKSEAHYACIVDL-LGRAGDLKKAVEFIQSMPI 384
M+ G + Y ++ LG +G L +VE I+ M +
Sbjct: 550 KMKEDGCTPDDFTYNILIRAHLGGSG-LISSVELIEEMKV 588
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 136/312 (43%), Gaps = 12/312 (3%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
D G + R++ + DV ++ +I + G EA +Y+EM G P+ TY +
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 124 LKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-- 181
+ E + + + V G + D+ + L++ Y K + V+ ++F E+ +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 182 --DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN-ATLVTVLPAFAQKADIHA 238
+ +++N+++ G+ +G ++ A LF +M G P + T +L +++
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR---GVPPSVVTYGILLDGLCDNGELNK 473
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIR 294
I + K+ M L + + +I N + A ++F +SD+ + +N +I
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIG 533
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAK 354
G EA +F+++ + G PD + L+ A L +L + M+ G +
Sbjct: 534 GLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSA 593
Query: 355 SEAHYACIVDLL 366
+ ++D+L
Sbjct: 594 DSSTIKMVIDML 605
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
D T+ ++ + +K + + + K G + D S L++ + G +S A A+
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 279 DRISDRT----IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
DR+ + + + +I + G EAL + ++V+ G +PD V + +L+ +
Sbjct: 164 DRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS 223
Query: 335 GMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQPGKN---VY 391
G A DLF+ ME + S Y+ ++D L + G A+ M ++ K Y
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 392 GALLGA 397
+L+G
Sbjct: 284 SSLIGG 289
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 176/402 (43%), Gaps = 26/402 (6%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHA---QVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D+F +T L+H + +A A Q+V G + D +V+ D ++ A
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD--IDLALS 244
Query: 73 VFDKLSA----RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-C 127
+ K+ DV +N +I G +ALN++ EM G P+ +TY ++ C
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 128 GAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DI 183
R S + ++ ++ ++ +AL+ + K ++ + K+++EM +R DI
Sbjct: 305 NYGRWSDASRLL-SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
+++S+I+G+ + +D+A +F M D P+ T T++ F + + G +
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD----RTIFVWNAIIRCYGMH 299
+ + G+ + + LI + A+ +F ++ I +N ++ +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
G +A+ +F+ L + + PD + ++ AG + GW+LF + GV+ + Y
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 360 ACIVDLLGRAGDLKKAVEFIQSM----PIQPGKNVYGALLGA 397
++ R G ++A ++ M P+ P Y L+ A
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRA 582
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 156/353 (44%), Gaps = 18/353 (5%)
Query: 43 GGHEQDPFIVAKLVD---KYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFA 99
G E D I ++D KY H D L ++ +K DVF ++ +I N G ++
Sbjct: 252 GKIEADVVIYNTIIDGLCKYK-HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 100 EALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALV 159
+A + +M PN T+ ++ A E + ++ +K +D D+F ++L+
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 160 SFYAKCQEVEASRKVFNEMPQRD----IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
+ + ++ ++ +F M +D +V+++++I G+ V++ + LF +M + +
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANC--GYISM 273
G + T T++ F Q D + +V G+ PN+ + I L C G ++
Sbjct: 431 G--NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH--PNILTYNILLDGLCKNGKLAK 486
Query: 274 ARAIFDRISDRT----IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLS 329
A +F+ + T I+ +N +I G ++ +F L G+ P+ + + ++S
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 330 ACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
G + L + M+ G + Y ++ R GD + + E I+ M
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 155/346 (44%), Gaps = 29/346 (8%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D+ + ++ GY + ++A+ + D+M G P+ +T+ ++ + + A+
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTN 196
V+ G DL +V+ K +++ + + +M + D+V +N++I G
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 197 GYVDDAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM---K 252
++DDA+ LF +M D+ G PD T +++ + G W + + M K
Sbjct: 272 KHMDDALNLFTEM---DNKGIRPDVFTYSSLISCLC-----NYGRWSDASRLLSDMIERK 323
Query: 253 LDPNLG--SGLISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEAL 306
++PN+ S LI + G + A ++D + R+I F ++++I + MH EA
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
MF+ ++ P+ V + L+ A + +G +LF+ M G+ + Y ++
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 367 GRAGDLKKAVEFIQSMP---IQPGKNVYGALL-GACRIHKNIELAE 408
+A D A + M + P Y LL G C KN +LA+
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC---KNGKLAK 486
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 154/346 (44%), Gaps = 23/346 (6%)
Query: 66 GLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
LE +R + ++ ++ ++++I G+ + +A A V+++M G P+ Y ++
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 126 A-CGA---ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
A CG +RA Q + ++ F+ ++ YAK ++ S +VF+ M +
Sbjct: 563 AFCGMGNMDRAIQTVKEMQ--KLRHRPTTRTFM--PIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 182 DIV----SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNA-TLVTVLPAFAQKADI 236
V ++N +I+G ++ AV + +M G N T ++ +A D
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL---AGVSANEHTYTKIMQGYASVGDT 675
Query: 237 HAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTI----FVWNAI 292
+ + G+ +D L+ G + A A+ +S R I FV+N +
Sbjct: 676 GKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNIL 735
Query: 293 IRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
I + G EA + QQ+ G++PD + +SACS AG + + + ME GV
Sbjct: 736 IDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGV 795
Query: 353 AKSEAHYACIVDLLGRAGDLKKAV---EFIQSMPIQPGKNVYGALL 395
+ Y ++ RA +KA+ E +++M I+P K VY LL
Sbjct: 796 KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 172/413 (41%), Gaps = 28/413 (6%)
Query: 64 DSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFV 123
D L RK+ ++ + ++V++ G++ G A +DE + T N Y +
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 124 L----KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP 179
+ + C ERA A+ + G+D + + + ++ Y + + VF +
Sbjct: 421 IYAHCQTCNMERA----EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 180 Q----RDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDN-ATLVTVLPAFAQKA 234
+ +V++ +I+ YT G + A+ + M + G N T ++ F +
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM---KEEGVKHNLKTYSMMINGFVKLK 533
Query: 235 DIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAI-----FDRISDR-TIFV 288
D + + +VK GMK D L + +IS + CG +M RAI ++ R T
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAF--CGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
+ II Y G + +L +F + G P F L++ + + ++ M
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEF---IQSMPIQPGKNVYGALLGACRIHKNIE 405
GV+ +E Y I+ GD KA E+ +Q+ + Y ALL AC ++
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 406 LAEFTAEKLFVLD-PNNAGRYVILAQMYEDAGQWQDAARVRKAIRENDIKKPI 457
A +++ + P N+ Y IL + G +AA + + +++ +K I
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDI 764
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 115/263 (43%), Gaps = 12/263 (4%)
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
+I GYA G +L V+D MR G P +T+ ++ +R +K I G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVF----NEMPQRDIVSWNSMISGYTTNGYVDDAV 203
+ + ++ YA + + + F NE DI ++ +++ +G + A+
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 204 LLFYDMFRHDDIGAPDNATLVTVL-PAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLI 262
+ +M + P N+ + +L +A++ D+ + + K G+K D + + I
Sbjct: 715 AVTKEMSARN---IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFI 771
Query: 263 SLYANCGYISMARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLR 318
S + G ++ A + + I + +I+ + ++ALS ++++ G++
Sbjct: 772 SACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIK 831
Query: 319 PDGVVFLCLLSACSHAGMLAQGW 341
PD V+ CLL++ +A+ +
Sbjct: 832 PDKAVYHCLLTSLLSRASIAEAY 854
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/376 (19%), Positives = 150/376 (39%), Gaps = 16/376 (4%)
Query: 74 FDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERAS 133
F+K+S + +++K Y G A ++ MR G TP Y ++ A R
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 134 QKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGY 193
+ + + G+++ L + +V ++K EA+ F+E +R + N+ I G
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE-AKRIHKTLNASIYGK 419
Query: 194 TTNGY-----VDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK 248
+ ++ A L +M + I AP A T++ + AD G + + +
Sbjct: 420 IIYAHCQTCNMERAEALVREM-EEEGIDAPI-AIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 249 TGMKLDPNLGSGLISLYANCGYISMA----RAIFDRISDRTIFVWNAIIRCYGMHGHAQE 304
G LI+LY G IS A R + + + ++ +I +
Sbjct: 478 CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN 537
Query: 305 ALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVD 364
A ++F+ +V G++PD +++ ++SA G + + + M+ + + I+
Sbjct: 538 AFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIH 597
Query: 365 LLGRAGDLKKAVEFIQSMP---IQPGKNVYGALLGACRIHKNIELA-EFTAEKLFVLDPN 420
++GD+++++E M P + + L+ + +E A E E
Sbjct: 598 GYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSA 657
Query: 421 NAGRYVILAQMYEDAG 436
N Y + Q Y G
Sbjct: 658 NEHTYTKIMQGYASVG 673
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 162/413 (39%), Gaps = 51/413 (12%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D ++ +I + G + A+N+ D+M A P+R TY ++ ACG+ ++ +
Sbjct: 177 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 236
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTN 196
G+ DL N ++S Y ++ + F M + D ++N +I +
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G A+ LF M PD T +++ ++ K +I + +V G+K PN
Sbjct: 297 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK--PN 354
Query: 257 LGS--GLISLYANCGYISMARAIFDRISDRTIF--------------------------- 287
+ S L+ YA G A ++ I I
Sbjct: 355 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 414
Query: 288 ------------VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
+NA+I YG +G EA+ +F+Q+ G++P+ V LL+ACS +
Sbjct: 415 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
Query: 336 MLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYG 392
+ ++ G+ + A Y + A +L+KA+ QSM ++ +
Sbjct: 475 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 393 ALL-GACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARV 444
L+ G+CR+ K E + E + P Y + Y GQ +A +
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/390 (19%), Positives = 144/390 (36%), Gaps = 50/390 (12%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
+V +N +I Y + G AEA+ ++ +M G PN + +L AC + +
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 483
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTN 196
A G++L+ N+ + Y E+E + ++ M ++ D V++ +ISG
Sbjct: 484 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 543
Query: 197 GYVDDAVLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
+A+ +M +D+ P +VL A++++ + I + G + D
Sbjct: 544 SKYPEAISYLKEM---EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQ 311
+ ++ Y A +F + I +A++R + G +
Sbjct: 601 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 660
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETY--------------------- 350
+ + + G VF + SAC+ + DL Q M+ Y
Sbjct: 661 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGK 720
Query: 351 --------------GVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGA 393
GV + YA +++ L G+ +K +E ++ M IQP +Y
Sbjct: 721 VEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRD 780
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAG 423
++ IE +KL L G
Sbjct: 781 IISFGERSAGIEFEPLIRQKLESLRNKGEG 810
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 162/413 (39%), Gaps = 51/413 (12%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D ++ +I + G + A+N+ D+M A P+R TY ++ ACG+ ++ +
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTN 196
G+ DL N ++S Y ++ + F M + D ++N +I +
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 164
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G A+ LF M PD T +++ ++ K +I + +V G+K PN
Sbjct: 165 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK--PN 222
Query: 257 LGS--GLISLYANCGYISMARAIFDRISDRTIF--------------------------- 287
+ S L+ YA G A ++ I I
Sbjct: 223 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 282
Query: 288 ------------VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAG 335
+NA+I YG +G EA+ +F+Q+ G++P+ V LL+ACS +
Sbjct: 283 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 342
Query: 336 MLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYG 392
+ ++ G+ + A Y + A +L+KA+ QSM ++ +
Sbjct: 343 KKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 402
Query: 393 ALL-GACRIHKNIELAEFTAEKLFVLDPNNAGRYVILAQMYEDAGQWQDAARV 444
L+ G+CR+ K E + E + P Y + Y GQ +A +
Sbjct: 403 ILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 455
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/381 (19%), Positives = 142/381 (37%), Gaps = 50/381 (13%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
+V +N +I Y + G AEA+ ++ +M G PN + +L AC + +
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTN 196
A G++L+ N+ + Y E+E + ++ M ++ D V++ +ISG
Sbjct: 352 SAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRM 411
Query: 197 GYVDDAVLLFYDMFRHDDIGAP-DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
+A+ +M +D+ P +VL A++++ + I + G + D
Sbjct: 412 SKYPEAISYLKEM---EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 468
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQ 311
+ ++ Y A +F + I +A++R + G +
Sbjct: 469 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 528
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETY--------------------- 350
+ + + G VF + SAC+ + DL Q M+ Y
Sbjct: 529 MREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGK 588
Query: 351 --------------GVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGA 393
GV + YA +++ L G+ +K +E ++ M IQP +Y
Sbjct: 589 VEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRD 648
Query: 394 LLGACRIHKNIELAEFTAEKL 414
++ IE +KL
Sbjct: 649 IISFGERSAGIEFEPLIRQKL 669
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/453 (21%), Positives = 190/453 (41%), Gaps = 69/453 (15%)
Query: 84 CWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVL----KACGAERASQKGHAI 139
C+N ++ A G E VY EM PN YTY ++ K E A+Q I
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTT 195
V+ GLD D F +L+ Y + ++++++ KVFNEMP +R+ V++ +I G
Sbjct: 245 ----VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
+D+A+ LF M DD P T ++ + + + +TG+K P
Sbjct: 301 ARRIDEAMDLFVKM--KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK--P 356
Query: 256 NLGSGLI---SLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHG-------- 300
N+ + + SL + C + AR + ++ ++ + +NA+I Y G
Sbjct: 357 NIHTYTVLIDSLCSQCKF-EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 301 --------------------------HAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+ +A+ + ++++ + PD V + L+ +
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 335 GMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVY 391
G + L M G+ + Y ++D L ++ +++A + S+ + P +Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 392 GALL-GACRIHKNIELAEFTAEKLFVLD--PNNAGRYVILAQMYEDAGQWQDAARVRKAI 448
AL+ G C+ K ++ A EK+ + PN+ ++ + D G+ ++A + + +
Sbjct: 536 TALIDGYCKAGK-VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD-GKLKEATLLEEKM 593
Query: 449 RENDIKKPIGYSSVELESGHRKFGANDESHPYS 481
+ ++ + ++ + HR D H YS
Sbjct: 594 VKIGLQPTVSTDTILI---HRLLKDGDFDHAYS 623
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 181/452 (40%), Gaps = 20/452 (4%)
Query: 16 DSFYYTDLLH-LC--KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTL--HSDSGLEYA 70
D F YT L+ C K DS K ++ + G ++ L+ + D ++
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
K+ D V + V+IK +EALN+ EM G PN +TY ++ + ++
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIV----SW 186
+K + G ++ GL ++ NAL++ Y K +E + V M R + ++
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N +I GY + V A+ + M + PD T +++ + + + Y + +
Sbjct: 432 NELIKGYCKSN-VHKAMGVLNKMLERKVL--PDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHA 302
G+ D + +I + A +FD + + + ++ A+I Y G
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
EA M ++++ P+ + F L+ G L + L + M G+ + + +
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 363 VDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGA-CRIHKNIELAEFTAEKLFVLD 418
+ L + GD A Q M +P + Y + CR + ++ + A+
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 419 PNNAGRYVILAQMYEDAGQWQDAARVRKAIRE 450
+ Y L + Y D GQ A V K +R+
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 149/348 (42%), Gaps = 14/348 (4%)
Query: 46 EQDPFIVAKLVD---KYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEAL 102
E D I ++D KY H D L +++ K +V ++ +I + G +++A
Sbjct: 257 EADVVIFNTIIDSLCKYR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 103 NVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFY 162
+ +M PN T+ ++ A E + ++ +K +D D+F N+LV+ +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 163 AKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
++ ++++F M + D+V++N++I G+ + V+D LF +M +G
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-- 433
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
D T T++ D + +V G+ D S L+ N G + A +F
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 279 DRISDRT----IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
D + I+++ +I G + +F L G++P+ V + ++S
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 335 GMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
+L + + L + M+ G + Y ++ R GD + E I+ M
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 155/352 (44%), Gaps = 29/352 (8%)
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
++ GY + ++A+ + D+M G P+ T+ ++ + + A+ V+ G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYVDDAV 203
+L +V+ K + + + + N+M + D+V +N++I +VDDA+
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 204 LLFYDMFRHDDIGAPDN----ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
LF +M + G N ++L++ L ++ + +D A + I K K++PNL +
Sbjct: 281 NLFKEM---ETKGIRPNVVTYSSLISCLCSYGRWSD--ASQLLSDMIEK---KINPNLVT 332
Query: 260 --GLISLYANCGYISMARAIFD----RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
LI + G A ++D R D IF +N+++ + MH +A MF+ +V
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
PD V + L+ + + G +LF+ M G+ Y ++ L GD
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 374 KAVEFIQSM---PIQPGKNVYGALL-GAC---RIHKNIELAEFTAEKLFVLD 418
A + + M + P Y LL G C ++ K +E+ ++ + LD
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/450 (20%), Positives = 181/450 (40%), Gaps = 52/450 (11%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQV---VVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D+ +T L+H + +A A V V G + + +V+ D+ L A
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL--ALN 246
Query: 73 VFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-C 127
+ +K+ A DV +N +I +ALN++ EM G PN TY ++ C
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 128 GAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DI 183
R S + ++ ++ +L NAL+ + K + + K++++M +R DI
Sbjct: 307 SYGRWSDASQLL-SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
++NS+++G+ + +D A +F M D PD T T++ F + + G +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF--PDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQ 303
+ G+ D Y ++ + +F G
Sbjct: 424 REMSHRGLVGD------------TVTYTTLIQGLFH-------------------DGDCD 452
Query: 304 EALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
A +F+Q+V G+ PD + + LL + G L + ++F M+ + Y ++
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 364 DLLGRAGDLKKAVEFIQSMP---IQPGKNVYGALLGACRIHKNIELAEFTAEKLFVLDP- 419
+ + +AG + + S+ ++P Y ++ + ++ A +K+ P
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 420 NNAGRYVILAQMYEDAGQWQDAARVRKAIR 449
N+G Y L + + G +A + + +R
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 120/280 (42%), Gaps = 23/280 (8%)
Query: 152 LFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYVDDAVLLFY 207
L+ N L++ + + ++ + + +M + IV+ +S+++GY + DAV L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 208 DMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYA 266
M ++G PD T T++ + +V+ G + PNL + + +
Sbjct: 180 QMV---EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVTYGVVVNG 234
Query: 267 NC--GYISMARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPD 320
C G +A + +++ + + ++N II + H +AL++F+++ G+RP+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 321 GVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQ 380
V + L+S G + L M + + + ++D + G +A +
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 381 SM---PIQPGKNVYGALL-GAC---RIHKNIELAEFTAEK 413
M I P Y +L+ G C R+ K ++ EF K
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 145/344 (42%), Gaps = 18/344 (5%)
Query: 70 ARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLK 125
A ++ K+ +R +V +N V+ G+ A V+ + G PN YTY ++
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID 521
Query: 126 ACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR---- 181
C Q + H ++++ V +++ K + +R++ M +
Sbjct: 522 GCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLC 581
Query: 182 -DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGY 240
+S+NS+I G+ G +D AV + +M + +P+ T +++ + +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI--SPNVITYTSLMNGLCKNNRMDQAL 639
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF----VWNAIIRCY 296
+ + G+KLD LI + + A A+F + + + ++N++I +
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 297 GMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSE 356
G+ AL ++++++ GLR D + L+ G L +L+ M+ G+ E
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 357 AHYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGALLGA 397
Y IV+ L + G K V+ + M + P +Y A++
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 119/276 (43%), Gaps = 19/276 (6%)
Query: 70 ARKVFDKLSARDVFC-----WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVL 124
AR++ + C +N +I G+ G A+ Y+EM G +PN TY ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 125 KACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEM------ 178
+ + G+ LD+ AL+ + K +E++ +F+E+
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 179 PQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
P + I +NS+ISG+ G + A+ L+ M + D D T T++ + ++
Sbjct: 687 PSQPI--YNSLISGFRNLGNMVAALDLYKKMLK--DGLRCDLGTYTTLIDGLLKDGNLIL 742
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTI----FVWNAIIR 294
++ + G+ D + + +++ + G +F+ + + ++NA+I
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSA 330
+ G+ EA + +++D G+ PDG F L+S
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 151/334 (45%), Gaps = 14/334 (4%)
Query: 61 LHSDSGLEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPN 116
L D+ +E A K+F+ + +++ ++ +I GY G +A +Y E+ A PN
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 117 RYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFN 176
+ ++ R ++ H VK G+D +L+V N L+ + K + + + +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 177 EMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQ 232
EM D+ ++ +I+G V +A LF M +++ I P +AT +++ + +
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM-KNERI-FPSSATYNSLIHGYCK 421
Query: 233 KADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF----V 288
+ ++ + + +G++ + S LI Y N I A ++ ++ + I
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVT 481
Query: 289 WNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTME 348
+ A+I + + +EAL ++ +++AG+ P+ F CL+ G L+ D +Q
Sbjct: 482 YTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENN 541
Query: 349 TYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
+ + C+++ L + G + +A F M
Sbjct: 542 QQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/412 (17%), Positives = 161/412 (39%), Gaps = 81/412 (19%)
Query: 36 AHAQVVVGGHEQD--PFIVAKLVDKYTLHSDSGLEYARKVFDKLS-----ARDVFCWNVV 88
A V+ G H+ ++ L+++ HS+ + ++F+ L + ++++
Sbjct: 80 AVIHVLTGAHKYTLARCLIKSLIERLKRHSEPS-NMSHRLFNALEDIQSPKFSIGVFSLL 138
Query: 89 IKGYANVGPFAEALNVYDEMRCA--------------------------------GTTPN 116
I + +G F EAL V EM+C+ G P+
Sbjct: 139 IMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPD 198
Query: 117 RYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFN 176
+ Y + + C + K + G+ ++++ + + ++E + K+F
Sbjct: 199 VHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFE 258
Query: 177 EMPQRDIV----SWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQ 232
M + ++ ++++MI GY G V A L+ ++ + + P+ T++ F +
Sbjct: 259 LMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELL--PNVVVFGTLVDGFCK 316
Query: 233 KADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAI 292
++ + ++VK G +DPNL +V+N +
Sbjct: 317 ARELVTARSLFVHMVKFG--VDPNL-----------------------------YVYNCL 345
Query: 293 IRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGV 352
I + G+ EA+ + ++ L PD + L++ +A+ LFQ M+ +
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 353 AKSEAHYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGALL-GACRI 400
S A Y ++ + ++++A++ M ++P + L+ G C +
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNV 457
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 15/283 (5%)
Query: 3 GVSRRLQQISVLRDSFYYTDLLHLCKTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKYTLH 62
G+ ++ +++ D F YT L++ D + A A + + + + +H
Sbjct: 360 GLLSEMESLNLSPDVFTYTILINGLCIEDQV--AEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 63 ---SDSGLEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP 115
+ +E A + +++A ++ ++ +I GY NV A+ +Y EM G P
Sbjct: 418 GYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVP 477
Query: 116 NRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVF 175
+ TY ++ A E ++ ++ ++ G+ + LV + K + + +
Sbjct: 478 DVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFY 537
Query: 176 NEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA 231
E Q+ + V + +I G NGY+ A F DM R I PD + V++L
Sbjct: 538 QENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM-RSCGI-TPDICSYVSMLKGHL 595
Query: 232 QKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMA 274
Q+ I + C ++KTG+ + + L Y GY+ A
Sbjct: 596 QEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 142/328 (43%), Gaps = 17/328 (5%)
Query: 67 LEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
+E A +F ++ + +V +N +I N G +++A + M PN T+
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 123 VLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRD 182
++ A E + +H ++ +D D N L++ + ++ ++++F M +D
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 183 ----IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHA 238
I ++N++I+G+ V+D V LF +M + +G + T T++ F Q D +
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG--NTVTYTTIIQGFFQAGDCDS 451
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRIS----DRTIFVWNAIIR 294
+ +V + D S L+ + G + A IF + + IF++N +I
Sbjct: 452 AQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIE 511
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAK 354
G EA +F L ++PD V + ++S +L + DLF+ M+ G
Sbjct: 512 GMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLP 568
Query: 355 SEAHYACIVDLLGRAGDLKKAVEFIQSM 382
+ Y ++ R D + E I+ M
Sbjct: 569 NSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 137/316 (43%), Gaps = 22/316 (6%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D+ + ++ GY + ++A+ + D+M G P+ +T+ ++ + + A+
Sbjct: 152 DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTN 196
V+ G DL +V+ K +++ + + N+M + ++V +N++I
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKY 271
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNA----TLVTVLPAFAQKADIHAGYWIHCYIVKTGMK 252
+V+ AV LF +M + G N +L+ L + + +D A + + K K
Sbjct: 272 RHVEVAVDLFTEM---ETKGIRPNVVTYNSLINCLCNYGRWSD--ASRLLSNMLEK---K 323
Query: 253 LDPNLGS--GLISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEAL 306
++PN+ + LI + G + A + + + R+I +N +I + MH EA
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLL 366
MF+ +V P+ + L++ + G +LF+ M G+ + Y I+
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 367 GRAGDLKKAVEFIQSM 382
+AGD A + M
Sbjct: 444 FQAGDCDSAQMVFKQM 459
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 164/400 (41%), Gaps = 57/400 (14%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHA---QVVVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D+F +T L+H + +A A Q+V G + D +V+ D ++ A
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD--IDLALN 244
Query: 73 VFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-C 127
+ +K+ A +V +N +I A++++ EM G PN TY ++ C
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 128 GAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DI 183
R S + K ++ ++ NAL+ + K ++ + K+ EM QR D
Sbjct: 305 NYGRWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 184 VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIH 243
+++N +I+G+ + +D+A +F M D + P+ T T++ F +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL--PNIQTYNTLINGFCK----------- 410
Query: 244 CYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIF----VWNAIIRCYGMH 299
C V+ G++L F +S R + + II+ +
Sbjct: 411 CKRVEDGVEL------------------------FREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 300 GHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHY 359
G A +F+Q+V + D + + LL G L +F+ ++ + + Y
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 360 ACIVDLLGRAGDLKKAVEFIQSMPIQPGKNVYGALL-GAC 398
+++ + +AG + +A + S+ I+P Y ++ G C
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 168/419 (40%), Gaps = 45/419 (10%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D+ +N +I Y F EA + EM AG PN +Y +L + ++
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI----VSWNSMISGYTTN 196
+ LDL N ++ Y + V+ + ++F + + DI VS+N+++ Y
Sbjct: 319 AEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA 378
Query: 197 GYVDDAVLLFYDMFRHD-----------------------------DIGA----PDNATL 223
+A+ LF M R D ++ + P+ T
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITY 438
Query: 224 VTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD 283
T++ + + + + + +G+++D L +I Y G + A+ + +
Sbjct: 439 STIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL 498
Query: 284 RTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDL 343
I G +EA +F+Q ++G D VF C+++ S ++
Sbjct: 499 PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEV 558
Query: 344 FQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP----IQPGKNVYGALLGACR 399
F+ M T G A +++ G+ + +KA + M + P + V+ +L
Sbjct: 559 FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDE-VHFQMLSLYS 617
Query: 400 IHKNIELAEFTAEKLFVLDPNNAGR--YVILAQMYEDAGQWQDAARVRKAIRENDIKKP 456
K+ E+ E ++L DPN + ++++A +YE A + DA+RV +RE I KP
Sbjct: 618 SKKDFEMVESLFQRLES-DPNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKP 675
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 133/310 (42%), Gaps = 12/310 (3%)
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
VF +NVV++ F A ++DEMR P+RYTY ++ + G E +
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNG 197
+ + DL + + L+ + + + +F+ + + D+V++NSMI+ Y
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 198 YVDDAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
+A LL +M ++ G P+ + T+L + + + + + LD
Sbjct: 275 LFREARLLIKEM---NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLT 331
Query: 257 LGSGLISLYANCGYISMARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQL 312
+ +I +Y + A +F + + + +N I+R YG EA+ +F+ +
Sbjct: 332 TCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLM 391
Query: 313 VDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDL 372
+ + V + ++ + +L Q M++ G+ + Y+ I+ + G+AG L
Sbjct: 392 QRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKL 451
Query: 373 KKAVEFIQSM 382
+A Q +
Sbjct: 452 DRAATLFQKL 461
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 143/330 (43%), Gaps = 12/330 (3%)
Query: 83 FCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGH 142
+ + V+KG + G A N+ EM +G PN Y ++K +
Sbjct: 418 YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 143 AVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDA 202
+ G+ D+F N+L+ +K + ++ +R EM + + N+ G +GY++ +
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL-KPNAFTYGAFISGYIEAS 536
Query: 203 VLLFYDMFRHD--DIGAPDNATLVT-VLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
D + + + G N L T ++ + +K + + +V G+ D +
Sbjct: 537 EFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 260 GLISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
L++ + A IF + + I F + +I + G+ Q+A S+F ++V+
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
GL P+ +++ LL +G + + +L M G+ + Y I+D ++GDL +A
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 376 VEFIQSMPIQ---PGKNVYGALL-GACRIH 401
M ++ P VY L+ G CR++
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 156/356 (43%), Gaps = 17/356 (4%)
Query: 39 QVVVGGHEQDPFIVAKLVDKYTLHSDSG--LEYARKVFDKLSARDVFCWNVVIKGYANVG 96
+++ G + I L+ + +S G + +++ ++ A D+FC+N +I G +
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAK 501
Query: 97 PFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH--GHAVKCGLDLDLFV 154
EA + EM G PN +TY + G AS+ A +CG+ + +
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFIS--GYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 155 GNALVSFYAKCQEVEASRKVFNEMPQRDIV----SWNSMISGYTTNGYVDDAVLLFYDMF 210
L++ Y K +V + + M + I+ ++ +++G N VDDA +F +M
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM- 618
Query: 211 RHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGY 270
R I APD + ++ F++ ++ I +V+ G+ + + + L+ + G
Sbjct: 619 RGKGI-APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 271 ISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLC 326
I A+ + D +S + + + II Y G EA +F ++ GL PD V+
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 327 LLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
L+ C + + +F T + G A S A + +++ + + G + E + +
Sbjct: 738 LVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 136/324 (41%), Gaps = 15/324 (4%)
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
R + D+ D + V++ G +A ++ EMR G P+ ++Y ++
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL 640
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI----VSW 186
QK +I V+ GL ++ + N L+ + + E+E ++++ +EM + + V++
Sbjct: 641 GNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
++I GY +G + +A LF +M + PD+ T++ + D+ I
Sbjct: 701 CTIIDGYCKSGDLAEAFRLFDEMKLKGLV--PDSFVYTTLVDGCCRLNDVERAITIFG-T 757
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTI--------FVWNAIIRCYGM 298
K G + LI+ G + + +R+ D + +N +I
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 299 HGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAH 358
G+ + A +F Q+ +A L P + + LL+ G A+ + +F G+
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 359 YACIVDLLGRAGDLKKAVEFIQSM 382
Y+ I++ + G KA+ + M
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQM 901
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/330 (17%), Positives = 124/330 (37%), Gaps = 45/330 (13%)
Query: 101 ALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVS 160
AL + + M C G P +YTY ++ + + ++ G+ LD + L+
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 161 FYAKCQEVEASRKVFNEMPQRDI----VSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
K + +A++ + +EM I ++ I + G ++ A LF M I
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLI- 379
Query: 217 APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARA 276
P +++ + ++ ++ GY + + K + + P
Sbjct: 380 -PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP--------------------- 417
Query: 277 IFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGM 336
+ + +++ G A ++ ++++ +G RP+ V++ L+
Sbjct: 418 ----------YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 337 LAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGA 393
+ + M+ G+A Y ++ L +A + +A F+ M ++P YGA
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 394 LLGACRIHKNIELAEFTAEKLFVLDPNNAG 423
I IE +EF + +V + G
Sbjct: 528 F-----ISGYIEASEFASADKYVKEMRECG 552
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 147/348 (42%), Gaps = 14/348 (4%)
Query: 46 EQDPFIVAKLVD---KYTLHSDSGLEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEAL 102
E D I ++D KY H D L +++ K +V ++ +I + G +++A
Sbjct: 182 EADVVIFNTIIDSLCKYR-HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 103 NVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFY 162
+ +M PN T+ ++ A E + +H +K +D D+F N+L++ +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 163 AKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
++ ++++F M + D+ ++N++I G+ + V+D LF +M +G
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-- 358
Query: 219 DNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIF 278
D T T++ D + +V G+ D S L+ N G + A +F
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 279 DRISDRT----IFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
D + I+++ +I G + +F L G++P+ V + ++S
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 335 GMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
+L + + L + M+ G Y ++ R GD + E I+ M
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 29/352 (8%)
Query: 88 VIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCG 147
++ GY + ++A+ + D+M G P+ T+ ++ + + A+ V+ G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 148 LDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYVDDAV 203
+L +V+ K +++ + + N+M + D+V +N++I +VDDA+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 204 LLFYDMFRHDDIGAPDN----ATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
LF +M + G N ++L++ L ++ + +D A + I K K++PNL +
Sbjct: 206 NLFKEM---ETKGIRPNVVTYSSLISCLCSYGRWSD--ASQLLSDMIEK---KINPNLVT 257
Query: 260 --GLISLYANCGYISMARAIFD----RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
LI + G A + D R D IF +N++I + MH +A MF+ +V
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
PD + L+ + + G +LF+ M G+ Y ++ L GD
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 374 KAVEFIQSMP---IQPGKNVYGALL-GAC---RIHKNIELAEFTAEKLFVLD 418
A + + M + P Y LL G C ++ K +E+ ++ + LD
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 14/279 (5%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAI 139
++ +N +I + G F EA ++D+M P+ +TY ++ C +R +
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 140 HGHAVK-CGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYT 194
K C DLD + N L+ + K + VE ++F EM R D V++ ++I G
Sbjct: 314 EFMVSKDCFPDLDTY--NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
+G D+A +F M D PD T +L + + Y+ K+ +KLD
Sbjct: 372 HDGDCDNAQKVFKQMV--SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQ 310
+ + +I G + +F +S + + +N +I QEA ++ +
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET 349
++ + G PD + L+ A G A +L + M +
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 140/345 (40%), Gaps = 47/345 (13%)
Query: 67 LEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPF 122
++ A + +K+ A DV +N +I +ALN++ EM G PN TY
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 123 VLKA-CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
++ C R S + ++ ++ +L NAL+ + K + + K+ ++M +R
Sbjct: 226 LISCLCSYGRWSDASQLL-SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 182 ----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIH 237
DI ++NS+I+G+ + +D A +F M D PD T T++ F + +
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF--PDLDTYNTLIKGFCKSKRVE 342
Query: 238 AGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYG 297
G + + G+ D Y ++ + +F
Sbjct: 343 DGTELFREMSHRGLVGD------------TVTYTTLIQGLFH------------------ 372
Query: 298 MHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA 357
G A +F+Q+V G+ PD + + LL + G L + ++F M+ +
Sbjct: 373 -DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 358 HYACIVDLLGRAGDLKKAVEFIQSMP---IQPGKNVYGALL-GAC 398
Y +++ + +AG + + S+ ++P Y ++ G C
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 125/287 (43%), Gaps = 23/287 (8%)
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYVD 200
+ G+ +L+ N L++ + + ++ + + +M + IV+ +S+++GY +
Sbjct: 38 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 97
Query: 201 DAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
DAV L M ++G PD T T++ + +V+ G + PNL +
Sbjct: 98 DAVALVDQMV---EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ--PNLVT 152
Query: 260 GLISLYANC--GYISMARAIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQLV 313
+ + C G I +A + +++ + + ++N II + H +AL++F+++
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 314 DAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLK 373
G+RP+ V + L+S G + L M + + + ++D + G
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 374 KAVEFIQSM---PIQPGKNVYGALL-GAC---RIHKNIELAEFTAEK 413
+A + M I P Y +L+ G C R+ K ++ EF K
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 173/399 (43%), Gaps = 20/399 (5%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQV---VVGGHEQDPFIVAKLVDKYTLHSDSGLEYA-- 70
DSF + L+H + +A A V VV G + D +V+ D L +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGA 129
+K+ V +N +I N +ALN++ EM G PN TY +++ C
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 130 ERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVS 185
R S + ++ ++ ++ +AL+ + K ++ + K+++EM +R DI +
Sbjct: 305 GRWSDASRLL-SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 186 WNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCY 245
++S+I+G+ + +D+A +F M D P+ T T++ F + + G +
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 246 IVKTGMKLDPNLGSGLISLYANCGYISMARAIFDR-ISDRT---IFVWNAIIRCYGMHGH 301
+ + G+ + + LI + A+ +F + +SD I ++ ++ +G
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYAC 361
+ AL +F+ L + + PD + ++ AG + GWDLF ++ GV + Y
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 362 IVDLLGRAGDLKKAVEFIQSMPIQ---PGKNVYGALLGA 397
++ R G ++A + M + P Y L+ A
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 129/296 (43%), Gaps = 20/296 (6%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIH 140
D+ N ++ G+ + ++A+++ +M G P+ +T+ ++ + + A+
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 141 GHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDI----VSWNSMISGYTTN 196
V G DL +V+ K +++ + + +M Q I V +N++I
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGM---KL 253
V+DA+ LF +M D+ G N L + + G W + + M K+
Sbjct: 270 KNVNDALNLFTEM---DNKGIRPNVVTYNSLI----RCLCNYGRWSDASRLLSDMIERKI 322
Query: 254 DPNLG--SGLISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALS 307
+PN+ S LI + G + A ++D + R+I F ++++I + MH EA
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 308 MFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIV 363
MF+ ++ P+ V + L+ A + +G +LF+ M G+ + Y ++
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 116/278 (41%), Gaps = 12/278 (4%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAI 139
+V ++ +I + G EA +YDEM P+ +TY ++ C +R + H
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTT 195
K ++ N L+ + K + V+ ++F EM QR + V++ ++I G+
Sbjct: 385 ELMISKDCFP-NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
D+A ++F M D PD T +L + + Y+ ++ M+ D
Sbjct: 444 ARECDNAQIVFKQMV--SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQ 311
+ +I G + +F +S + + + ++ + G +EA ++F++
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 312 LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMET 349
+ + G PD + L+ A G A +L + M +
Sbjct: 562 MKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/397 (19%), Positives = 163/397 (41%), Gaps = 22/397 (5%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQK-GHAIHGHA 143
++ ++ A + F +++ ++M+ G + N YTY +L C R+ A+
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS-ILINCFCRRSQLSLALAVLAKM 142
Query: 144 VKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYV 199
+K G + D+ N+L++ + + + + +M Q D ++N++I G +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 200 DDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGS 259
+AV L M PD T V+ ++ DI + + + ++ + +
Sbjct: 203 SEAVALVDRMVVKG--CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 260 GLISLYANCGYISMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+I N ++ A +F + ++ + +N++IRC +G +A + +++
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVD---LLGRAGDL 372
+ P+ V F L+ A G L + L+ M + Y+ +++ + R +
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 373 KKAVEFIQSMPIQPGKNVYGALL-GAC---RIHKNIELAEFTAEKLFVLDPNNAGRYVIL 428
K E + S P Y L+ G C R+ + +EL +++ V N Y L
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV---GNTVTYTTL 437
Query: 429 AQMYEDAGQWQDAARVRKAIRENDIKKPIGYSSVELE 465
+ A + +A V K + + + I S+ L+
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 165/399 (41%), Gaps = 54/399 (13%)
Query: 16 DSFYYTDLLHLCKTTDSIKKAHAQV---VVGGHEQDPFIVAKLVDKYTLHSDSGLEYARK 72
D+ +T L+H + +A A V VV G + D +++ + L A
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL--ALN 236
Query: 73 VFDKLSA----RDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY-PFVLKAC 127
+ +K+ DV +N +I G +A +++++M G P+ +TY P + C
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 128 GAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-----D 182
R S + K ++ DL NAL+ + K ++ + K+++EM + D
Sbjct: 297 NYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWI 242
+V++N++I G+ V++ + +F +M + +G + T T++ F Q D +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG--NTVTYTTLIHGFFQARDCDNAQMV 413
Query: 243 HCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHA 302
+V G+ D I +N ++ +G+
Sbjct: 414 FKQMVSDGVHPD-------------------------------IMTYNILLDGLCNNGNV 442
Query: 303 QEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACI 362
+ AL +F+ + ++ D V + ++ A AG + GWDLF ++ GV + Y +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 363 VDLLGRAGDLKKA----VEFIQSMPIQPGKNVYGALLGA 397
+ R G ++A VE + P+ P Y L+ A
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRA 540
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/271 (18%), Positives = 111/271 (40%), Gaps = 10/271 (3%)
Query: 85 WNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAV 144
++ ++ A + F +++ ++M+ G + N YTY + AI G +
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137
Query: 145 KCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYTTNGYVD 200
K G + N+L++ + + + + ++M Q D V++ +++ G +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 201 DAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSG 260
+AV L M PD T V+ ++ + + + K ++ D + +
Sbjct: 198 EAVALVERMVVKG--CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 261 LISLYANCGYISMARAIFDRISDRTI----FVWNAIIRCYGMHGHAQEALSMFQQLVDAG 316
+I ++ A +F+++ + I F +N +I C +G +A + +++
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 317 LRPDGVVFLCLLSACSHAGMLAQGWDLFQTM 347
+ PD V F L+ A G L + L+ M
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 158/365 (43%), Gaps = 21/365 (5%)
Query: 28 KTTDSIKKAHAQVVVGGHEQDPFIVAKLVDKY--TLHSDSGLEYARKVFDKLSARDVFCW 85
+ +D++ V +G ++ D ++D T + ++ +++ K +V +
Sbjct: 170 RVSDAVSLVDKMVEIG-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 86 NVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVK 145
++ G N +++A + +M TPN TY +L A + + V+
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 146 CGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDD 201
+D D+ ++L++ ++ + ++F+ M + D+VS+N++I+G+ V+D
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 202 AVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGL 261
+ LF +M + + + T T++ F Q D+ + G+ D + L
Sbjct: 349 GMKLFREMSQRGLVS--NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 262 ISLYANCGYISMARAIFD----RISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGL 317
+ + G + A IF+ R D I + +IR G +EA S+F L GL
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 318 RPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVE 377
+PD V + ++S G+L + L+ M+ G+ K++ + GD+ + E
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITLSAE 518
Query: 378 FIQSM 382
I+ M
Sbjct: 519 LIKKM 523
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 131/325 (40%), Gaps = 42/325 (12%)
Query: 81 DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAI 139
D++ +N+VI + + AL++ +M G P+R T ++ C R S ++
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD-AVSL 177
Query: 140 HGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTT 195
V+ G D+ NA++ K + V + F E+ ++ ++V++ ++++G
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 196 NGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDP 255
+ DA L DM + P+ T +L AF + + + +V+ M +DP
Sbjct: 238 SSRWSDAARLLSDMIKKKI--TPNVITYSALLDAFVKNGKVLEAKELFEEMVR--MSIDP 293
Query: 256 NLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDA 315
+ I ++++I +H EA MF +V
Sbjct: 294 D-----------------------------IVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 316 GLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKA 375
G D V + L++ A + G LF+ M G+ + Y ++ +AGD+ KA
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 376 VEFIQSMP---IQPGKNVYGALLGA 397
EF M I P Y LLG
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGG 409
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 19/349 (5%)
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
V+ N++I G VG AEAL + +M G P+ TY + K +
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-----DIVSWNSMISGYTTN 196
+ GL D+ L+ + ++ + +M R I+ + M+SG
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G +D+A+ LF M D +PD V+ + W+ Y ++ PN
Sbjct: 377 GRIDEALSLFNQM--KADGLSPDLVAYSIVIHGLCKLGKFDMALWL--YDEMCDKRILPN 432
Query: 257 LGSGLISLYANC--GYISMARAIFDRI--SDRT--IFVWNAIIRCYGMHGHAQEALSMFQ 310
+ L C G + AR++ D + S T I ++N +I Y G +EAL +F+
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAG 370
+++ G+ P F L+ +A+ + ++ YG+A S Y ++D G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 371 DLKKAVEFIQSMP---IQPGKNVYGALL-GACRIHKNIELAEFTAEKLF 415
+ K E + M I P Y + G CR K+ E++F
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 149/366 (40%), Gaps = 60/366 (16%)
Query: 67 LEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY-P 121
++ A +F+++ A D+ +++VI G +G F AL +YDEM PN T+
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 122 FVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
+L C QKG + ++ LD + G L
Sbjct: 439 LLLGLC------QKGMLLEARSL---LDSLISSGETL----------------------- 466
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGY 240
DIV +N +I GY +G +++A+ LF + + G P AT +++ + + +I
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVI---ETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYI----SMARAIFDRISDRTIFVWNAIIR-- 294
I I G+ + L+ YANCG + R + T ++ I +
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 295 CYG-MHGHAQEAL--SMFQQ-------LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
C G H + L +F++ + G+ PD + + ++ L+ +
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 345 QTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQP---GKNVYGALLGACRIH 401
+ M++ + S A Y ++D L G ++KA FI S+ Q K Y L+ A +
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 402 KNIELA 407
+ E+A
Sbjct: 704 GDPEMA 709
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 15/269 (5%)
Query: 61 LHSDSG-LEYARKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEM-----RCAGTT 114
+H G L+ R++FD++ RD W +V G +G + +A ++ M + A
Sbjct: 132 MHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKI 191
Query: 115 PNRYTYPFVLKACGAERASQKGHAIHGHAVKCGL--DLDLFVGNALVSFYAKCQEVEASR 172
P+ + VLKAC R + G +H K G + D ++ +L+ FY + + +E +
Sbjct: 192 PS-WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDAN 250
Query: 173 KVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVT-VLPAFA 231
V +++ + V+W + ++ G + + F +M H G N ++ + VL A +
Sbjct: 251 LVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNH---GIKKNVSVFSNVLKACS 307
Query: 232 QKAD-IHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRT-IFVW 289
+D +G +H +K G + D + LI +Y G + A +F D T + W
Sbjct: 308 WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCW 367
Query: 290 NAIIRCYGMHGHAQEALSMFQQLVDAGLR 318
NA++ Y +G EA+ + Q+ G++
Sbjct: 368 NAMVASYMQNGIYIEAIKLLYQMKATGIK 396
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 129/307 (42%), Gaps = 14/307 (4%)
Query: 99 AEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNAL 158
++ L + D + G N Y + K E + H + H +K + + N L
Sbjct: 73 SDILRLMDSLSLPG---NEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRL 129
Query: 159 VSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAP 218
+ + C ++ +R++F+ MP RD SW + G G +DA LF M +H GA
Sbjct: 130 LLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAF 189
Query: 219 DNATLV--TVLPAFAQKADIHAGYWIHCYIVKTGM--KLDPNLGSGLISLYANCGYISMA 274
+ + VL A A D G +H K G + D L LI Y + A
Sbjct: 190 KIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDA 249
Query: 275 RAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHA 334
+ ++S+ W A + G QE + F ++ + G++ + VF +L ACS
Sbjct: 250 NLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACS-- 307
Query: 335 GMLAQGWDLFQTMETYGVA---KSEAHYAC-IVDLLGRAGDLKKAVEFIQSMPIQPGKNV 390
++ G Q + + +S+ C ++++ G+ G +K A + +S + +
Sbjct: 308 -WVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Query: 391 YGALLGA 397
+ A++ +
Sbjct: 367 WNAMVAS 373
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 19/349 (5%)
Query: 82 VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHG 141
V+ N++I G VG AEAL + +M G P+ TY + K +
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 142 HAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR-----DIVSWNSMISGYTTN 196
+ GL D+ L+ + ++ + +M R I+ + M+SG
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 197 GYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPN 256
G +D+A+ LF M D +PD V+ + W+ Y ++ PN
Sbjct: 377 GRIDEALSLFNQM--KADGLSPDLVAYSIVIHGLCKLGKFDMALWL--YDEMCDKRILPN 432
Query: 257 LGSGLISLYANC--GYISMARAIFDRI--SDRT--IFVWNAIIRCYGMHGHAQEALSMFQ 310
+ L C G + AR++ D + S T I ++N +I Y G +EAL +F+
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 311 QLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAG 370
+++ G+ P F L+ +A+ + ++ YG+A S Y ++D G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 371 DLKKAVEFIQSMP---IQPGKNVYGALL-GACRIHKNIELAEFTAEKLF 415
+ K E + M I P Y + G CR K+ E++F
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 149/366 (40%), Gaps = 60/366 (16%)
Query: 67 LEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTY-P 121
++ A +F+++ A D+ +++VI G +G F AL +YDEM PN T+
Sbjct: 379 IDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 122 FVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR 181
+L C QKG + ++ LD + G L
Sbjct: 439 LLLGLC------QKGMLLEARSL---LDSLISSGETL----------------------- 466
Query: 182 DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG-APDNATLVTVLPAFAQKADIHAGY 240
DIV +N +I GY +G +++A+ LF + + G P AT +++ + + +I
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVI---ETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 241 WIHCYIVKTGMKLDPNLGSGLISLYANCGYI----SMARAIFDRISDRTIFVWNAIIR-- 294
I I G+ + L+ YANCG + R + T ++ I +
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 295 CYG-MHGHAQEAL--SMFQQ-------LVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLF 344
C G H + L +F++ + G+ PD + + ++ L+ +
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 345 QTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMPIQP---GKNVYGALLGACRIH 401
+ M++ + S A Y ++D L G ++KA FI S+ Q K Y L+ A +
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 402 KNIELA 407
+ E+A
Sbjct: 704 GDPEMA 709
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 137/327 (41%), Gaps = 44/327 (13%)
Query: 70 ARKVFDKLSAR---DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKA 126
A+ FD L R DV + +++G+ G +EA V+ EM+ AG PN YTY V+ A
Sbjct: 240 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 299
Query: 127 CGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRD 182
+ H + + G + N L+ + K E +V+N+M + D
Sbjct: 300 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 359
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHD-DIGAPDNATLVTVLPAFAQKADIHAGYW 241
+++N +I + + +++AV + M + ++ A +T T+ +K D++ +
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNA---STFNTIFRYIEKKRDVNGAHR 416
Query: 242 IHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGH 301
++ +++ K +PN +N ++R +
Sbjct: 417 MYSKMMEA--KCEPN-----------------------------TVTYNILMRMFVGSKS 445
Query: 302 AQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTM-ETYGVAKSEAHYA 360
L M +++ D + P+ + L++ G + LF+ M E + S + Y
Sbjct: 446 TDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYE 505
Query: 361 CIVDLLGRAGDLKKAVEFIQSMPIQPG 387
++ L RAG LKK E ++ M IQ G
Sbjct: 506 MVLAQLRRAGQLKKHEELVEKM-IQKG 531
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 162/376 (43%), Gaps = 35/376 (9%)
Query: 44 GHEQDPFIVAKLVDKYTLHSDSG-LEYARKVFDKLSAR-DVFC---WNVVIKGYANVGPF 98
G E D + L+ + D G L+ + +FD++ R D C +N +I+G+ +G
Sbjct: 242 GLEADLVVYTSLIRGFC---DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 99 AEALNVYDEMRCAGTTPNRYTYPFVLKA-CGAERASQKGHAIH--------GHAVKCGLD 149
EA +++ M G PN YTY ++ CG + + ++ +AV +
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 150 LDLFVGNALVSFYAKCQEVEASRKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDM 209
++ + LV+ + E+ R+ + D +++N ++ G G +D+A L Y M
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRT-----RPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 210 FRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVK---TGMKLDPNLGSGLISLYA 266
+ PD + ++ ++ +H I+ +V+ G ++ N+ L++
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI---LLNSTL 470
Query: 267 NCGYISMARAIFDRISDRTIF----VWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGV 322
G ++ A ++ +ISD I + A+I + G A + ++ + L+P
Sbjct: 471 KAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVF 530
Query: 323 VFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM 382
+ CLLS+ G L Q W LF+ M+ + ++D +AGD+K A + M
Sbjct: 531 DYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM 590
Query: 383 P---IQPGKNVYGALL 395
+ P Y L+
Sbjct: 591 SRAGLSPDLFTYSKLI 606
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 134/313 (42%), Gaps = 23/313 (7%)
Query: 101 ALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVS 160
A + Y +M T N + +L+ R + + +K G +++ N L+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 161 FYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIG 216
+ E + + EM + D+ S+N++I G+ ++ A+ L +M G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-----KG 205
Query: 217 APDNATLVT---VLPAF--AQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYI 271
+ + +LVT ++ AF A K D G+ + G++ D + + LI + +CG +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM--GLEADLVVYTSLIRGFCDCGEL 263
Query: 272 SMARAIFDRISDR----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCL 327
+A+FD + +R +N +IR + G +EA +F+ +++ G+RP+ + L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 328 LSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSMP---I 384
+ G + L M + Y I++ L + G + AVE ++ M
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT 383
Query: 385 QPGKNVYGALLGA 397
+P Y LLG
Sbjct: 384 RPDNITYNILLGG 396
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/391 (19%), Positives = 153/391 (39%), Gaps = 55/391 (14%)
Query: 79 ARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHA 138
A +V+ N+++KG +A+++ EMR P+ ++Y V++ + +K
Sbjct: 139 AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALE 198
Query: 139 IHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMP----QRDIVSWNSMISGYT 194
+ G L L+ + K +++ + EM + D+V + S+I G+
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 195 TNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLD 254
G +D LF ++ D +P T T++ F + + I ++++ G++
Sbjct: 259 DCGELDRGKALFDEVLERGD--SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVR-- 314
Query: 255 PNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEALSMFQQLVD 314
PN ++ + +I G +EAL + +++
Sbjct: 315 PN-----------------------------VYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 315 AGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEAHYACIVDLLGRAGDLKK 374
P+ V + +++ G++A ++ + M+ Y ++ L GDL +
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDE 405
Query: 375 AVEFIQSMP-----IQPGKNVYGALL-GAC---RIHKNIELAEFTAEKLFVLDPNNAGRY 425
A + + M P Y AL+ G C R+H+ +++ + EKL AG
Sbjct: 406 ASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKL------GAGDR 459
Query: 426 V---ILAQMYEDAGQWQDAARVRKAIRENDI 453
V IL AG A + K I ++ I
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKI 490
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 130/303 (42%), Gaps = 50/303 (16%)
Query: 44 GHEQDPFIVAKLVDKYTLHSDSGLEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFA 99
G E D +A ++D Y + ++ A ++D+ D ++ +I+ Y G +
Sbjct: 240 GCEPDNVTMAAMIDAYGRAGN--VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 100 EALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALV 159
LN+Y+EM+ G PN Y ++ + G + + I+ + G + ALV
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 160 SFYAKCQEVEASRKVFNEMPQR----DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDI 215
Y + + + + ++ EM ++ ++ +N+++S N YVD+A +F DM ++ +
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM-KNCET 416
Query: 216 GAPDNATLVTVLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMAR 275
PD+ T S LI++YA G +S A
Sbjct: 417 CDPDSWTF-----------------------------------SSLITVYACSGRVSEAE 441
Query: 276 AIFDRIS----DRTIFVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSAC 331
A ++ + T+FV ++I+CYG + + F Q+++ G+ PD CLL+
Sbjct: 442 AALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVM 501
Query: 332 SHA 334
+
Sbjct: 502 TQT 504
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/421 (18%), Positives = 170/421 (40%), Gaps = 39/421 (9%)
Query: 4 VSRRLQQISVLRDSFY---YTDLLHLCKTTDSIKKAHAQV--VVGGH-----EQDPFIVA 53
V+ + + S LR Y Y+ L+ L ++ D+ K A V V+ G EQD +
Sbjct: 90 VNPKSPRASQLRRKSYDSRYSSLIKLAESLDACKPNEADVCDVITGFGGKLFEQDAVV-- 147
Query: 54 KLVDKYTLHSDSGLEYARKVFDKL-----SARDVFCWNVVIKGYANVGPFAEALNVYDEM 108
TL++ + E A V + L +R+V +NV +K + ++ ++DEM
Sbjct: 148 ------TLNNMTNPETAPLVLNNLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEM 201
Query: 109 RCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEV 168
G P+ T+ ++ ++ G + D A++ Y + V
Sbjct: 202 LERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV 261
Query: 169 EASRKVFN----EMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLV 224
+ + +++ E + D V+++++I Y +G D + ++ +M +G N +
Sbjct: 262 DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEM---KALGVKPNLVIY 318
Query: 225 T-VLPAFAQKADIHAGYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISD 283
++ + + I+ ++ G + + + L+ Y Y A AI+ + +
Sbjct: 319 NRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKE 378
Query: 284 R----TIFVWNAIIRCYGMHGHAQEALSMFQQLVDA-GLRPDGVVFLCLLSACSHAGMLA 338
+ T+ ++N ++ + + EA +FQ + + PD F L++ + +G ++
Sbjct: 379 KGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVS 438
Query: 339 QGWDLFQTMETYGVAKSEAHYACIVDLLGRA---GDLKKAVEFIQSMPIQPGKNVYGALL 395
+ M G + ++ G+A D+ + + + + I P G LL
Sbjct: 439 EAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLL 498
Query: 396 G 396
Sbjct: 499 N 499
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 171/412 (41%), Gaps = 65/412 (15%)
Query: 27 CKTTDSIKKAH--AQVVVGGHEQDPFIVAKLVDKY-TLHSDSGLEYARKVFDKLSARDVF 83
C++ + I+ H +V G+ D + KL+ + TL + ++ +K DVF
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 84 CWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAERASQKGHAIHGHA 143
+N +I G+ + +A V D MR +P+ TY ++ + +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS-------------- 205
Query: 144 VKCGLDLDLFVGNALVSFYAKCQE-----------------VEASRKVFNEMPQR----D 182
+ LDL L V N L+S CQ V+ + K+ +EM R D
Sbjct: 206 -RGKLDLALKVLNQLLS--DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 183 IVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA--PDNATLVTVLPAFAQKADIHAGY 240
+ ++N++I G G VD A ++M R+ ++ PD + +L +A ++ G
Sbjct: 263 MFTYNTIIRGMCKEGMVDRA----FEMVRNLELKGCEPDVISYNILL-----RALLNQGK 313
Query: 241 WIHCYIVKTGM---KLDPNLG--SGLISLYANCGYISMARAIFDRISDRTI----FVWNA 291
W + T M K DPN+ S LI+ G I A + + ++ + + ++
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 292 IIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYG 351
+I + G A+ + ++ G PD V + +L+ G Q ++F + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 352 VAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALLGA-CR 399
+ + + Y + L +GD +A+ I M I P + Y +++ CR
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 150/352 (42%), Gaps = 19/352 (5%)
Query: 60 TLHSDSGLEYARKVFDKLSARD----VFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTP 115
+L S L+ A KV ++L + + V + ++I+ G EAL + DEM G P
Sbjct: 202 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Query: 116 NRYTYPFVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFY---AKCQEVEA-S 171
+ +TY +++ E + + + G + D+ N L+ K +E E
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 172 RKVFNEMPQRDIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFA 231
K+F+E ++V+++ +I+ +G +++A+ L M + PD + ++ AF
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM--KEKGLTPDAYSYDPLIAAFC 379
Query: 232 QKADIHAGYWIHCYIVKTGMKLD-PNLGSGLISLYANCGYISMARAIFDRISD----RTI 286
++ + ++ G D N + L +L N G A IF ++ +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN-GKADQALEIFGKLGEVGCSPNS 438
Query: 287 FVWNAIIRCYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQT 346
+N + G AL M +++ G+ PD + + ++S GM+ + ++L
Sbjct: 439 SSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 347 METYGVAKSEAHYACIVDLLGRAGDLKKAVEFIQSM---PIQPGKNVYGALL 395
M + S Y ++ +A ++ A+ ++SM +P + Y L+
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 38/303 (12%)
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
+++F+ D C+ +I GY N+G +A + + +G P+ T ++ AC
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSW 186
+ ++ + GL LD+ N L+ Y K ++ ++ +EM D+ ++
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N +I GY+D+A + ++ R + P V+ F+++ D + + Y+
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFV--PSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
MK D S L+ GY R ++A+
Sbjct: 575 ADLRMKPDVVTCSALLH-----GYCKAQR--------------------------MEKAI 603
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA-HYACIVDL 365
+F +L+DAGL+PD V++ L+ G + + +L M G+ +E+ H+A ++ L
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Query: 366 LGR 368
G+
Sbjct: 664 EGK 666
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/352 (17%), Positives = 144/352 (40%), Gaps = 19/352 (5%)
Query: 66 GLEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYP 121
GLE AR+ + + +R + ++ I+ Y + G F + + M+ G P+ +
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT 310
Query: 122 -FVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
F+ K C A + + + G+ D ++++ + K + E + K+ +
Sbjct: 311 VFIDKLCKAGFLKEATSVLFKLKL-FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL 369
Query: 181 R-DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHA 238
R +I ++S +S + G + A +F ++F ++G PD T++ +
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIF---ELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIR 294
+ ++K+G + LI + G IS A ++F + + +N ++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAK 354
YG + + ++ AG+ PD + L+ + G + + ++ + G
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 355 SEAHYACIVDLLGRAGDLKKAVE---FIQSMPIQPGKNVYGALL-GACRIHK 402
S + ++ + GD ++A ++ + ++P ALL G C+ +
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 38/303 (12%)
Query: 71 RKVFDKLSARDVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYPFVLKACGAE 130
+++F+ D C+ +I GY N+G +A + + +G P+ T ++ AC
Sbjct: 397 QEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 131 RASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQR----DIVSW 186
+ ++ + GL LD+ N L+ Y K ++ ++ +EM D+ ++
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Query: 187 NSMISGYTTNGYVDDAVLLFYDMFRHDDIGAPDNATLVTVLPAFAQKADIHAGYWIHCYI 246
N +I GY+D+A + ++ R + P V+ F+++ D + + Y+
Sbjct: 517 NILIHSMVVRGYIDEANEIISELIRRGFV--PSTLAFTDVIGGFSKRGDFQEAFILWFYM 574
Query: 247 VKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDRTIFVWNAIIRCYGMHGHAQEAL 306
MK D S L+ GY R ++A+
Sbjct: 575 ADLRMKPDVVTCSALLH-----GYCKAQR--------------------------MEKAI 603
Query: 307 SMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAKSEA-HYACIVDL 365
+F +L+DAGL+PD V++ L+ G + + +L M G+ +E+ H+A ++ L
Sbjct: 604 VLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Query: 366 LGR 368
G+
Sbjct: 664 EGK 666
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/352 (17%), Positives = 144/352 (40%), Gaps = 19/352 (5%)
Query: 66 GLEYARKVFDKLSAR----DVFCWNVVIKGYANVGPFAEALNVYDEMRCAGTTPNRYTYP 121
GLE AR+ + + +R + ++ I+ Y + G F + + M+ G P+ +
Sbjct: 251 GLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFT 310
Query: 122 -FVLKACGAERASQKGHAIHGHAVKCGLDLDLFVGNALVSFYAKCQEVEASRKVFNEMPQ 180
F+ K C A + + + G+ D ++++ + K + E + K+ +
Sbjct: 311 VFIDKLCKAGFLKEATSVLFKLKL-FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL 369
Query: 181 R-DIVSWNSMISGYTTNGYVDDAVLLFYDMFRHDDIGA-PDNATLVTVLPAFAQKADIHA 238
R +I ++S +S + G + A +F ++F ++G PD T++ +
Sbjct: 370 RPNIFVYSSFLSNICSTGDMLRASTIFQEIF---ELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 239 GYWIHCYIVKTGMKLDPNLGSGLISLYANCGYISMARAIFDRISDR----TIFVWNAIIR 294
+ ++K+G + LI + G IS A ++F + + +N ++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 295 CYGMHGHAQEALSMFQQLVDAGLRPDGVVFLCLLSACSHAGMLAQGWDLFQTMETYGVAK 354
YG + + ++ AG+ PD + L+ + G + + ++ + G
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 355 SEAHYACIVDLLGRAGDLKKAVE---FIQSMPIQPGKNVYGALL-GACRIHK 402
S + ++ + GD ++A ++ + ++P ALL G C+ +
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598