Miyakogusa Predicted Gene

Lj4g3v2666320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2666320.1 Non Chatacterized Hit- tr|C1E680|C1E680_MICSR
Putative uncharacterized protein OS=Micromonas sp.
(st,32.77,0.0000000002,no description,NULL; no
description,Tetratricopeptide-like helical; BINDING / PROTEIN
BINDING,NULL; ,CUFF.51492.1
         (280 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55480.1 | Symbols: ZKT | protein containing PDZ domain, a K-...   384   e-107
AT1G02910.1 | Symbols: LPA1 | tetratricopeptide repeat (TPR)-con...    61   7e-10
AT5G17170.2 | Symbols: ENH1 | rubredoxin family protein | chr5:5...    52   3e-07
AT5G17170.1 | Symbols: ENH1 | rubredoxin family protein | chr5:5...    52   6e-07

>AT1G55480.1 | Symbols: ZKT | protein containing PDZ domain, a K-box
           domain, and a TPR region | chr1:20713822-20715351
           FORWARD LENGTH=335
          Length = 335

 Score =  384 bits (985), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/227 (78%), Positives = 204/227 (89%)

Query: 54  LDQPYGLRFVKGRDGGTYIDAIAPGGAADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRT 113
           ++QPYGL+F KGRDGGTYIDAI PGG+ADK G FTVGD+V+ATSAVFGTEIWPAAEYGRT
Sbjct: 93  VEQPYGLKFRKGRDGGTYIDAILPGGSADKTGKFTVGDRVIATSAVFGTEIWPAAEYGRT 152

Query: 114 MYTIRQRIGPLLMRMQKRYGKIETGGALTEKEIIRAERNSGVISNRVREIQMTNYMRRKE 173
           MYTIRQRIGPLLM+M+KR GK E  G LTEKEIIRAERN+G IS+R+REIQM NY+++KE
Sbjct: 153 MYTIRQRIGPLLMQMEKRNGKAEDTGELTEKEIIRAERNAGYISSRLREIQMQNYLKKKE 212

Query: 174 QKEQRENDLKEGLVLYRNAKYEEALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIKA 233
           QK QRE DL+EGL   +N KYEEALE+FESVLGSKP P+EA+VASYNVACCYSKLNQ++A
Sbjct: 213 QKAQREKDLREGLQFSKNGKYEEALERFESVLGSKPTPEEASVASYNVACCYSKLNQVQA 272

Query: 234 ALSSLEEALNSGFEDFKRIRSDPDLANLRASEDFDPLIKRFDESFIN 280
            LS+LEEAL SG+EDFKRIRSDPDL  LR S+DFDPL+K+FDESFIN
Sbjct: 273 GLSALEEALKSGYEDFKRIRSDPDLETLRKSKDFDPLLKQFDESFIN 319


>AT1G02910.1 | Symbols: LPA1 | tetratricopeptide repeat
           (TPR)-containing protein | chr1:655749-658125 REVERSE
           LENGTH=453
          Length = 453

 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 48/86 (55%)

Query: 185 GLVLYRNAKYEEALEKFESVLGSKPEPDEAAVASYNVACCYSKLNQIKAALSSLEEALNS 244
           GL L++  + ++AL +FE+ L   P P E+  A YN ACC++   + K A+  L  AL  
Sbjct: 82  GLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRD 141

Query: 245 GFEDFKRIRSDPDLANLRASEDFDPL 270
               F  I +DPDLA+ RA  +F  L
Sbjct: 142 YNLKFATILNDPDLASFRALPEFKEL 167


>AT5G17170.2 | Symbols: ENH1 | rubredoxin family protein |
           chr5:5649335-5650835 FORWARD LENGTH=224
          Length = 224

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 54  LDQPYGLRFVKGRDGGTYIDAIAPGGAADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRT 113
           +D+P GL   + + GG  I  +  GG A KAG+ + GD+V+ TS+ FG E+WPA + G T
Sbjct: 90  VDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS-GDQVVYTSSFFGDELWPADKLGFT 148

Query: 114 MYTIRQR 120
              I+ +
Sbjct: 149 KTAIQAK 155


>AT5G17170.1 | Symbols: ENH1 | rubredoxin family protein |
           chr5:5649335-5650975 FORWARD LENGTH=271
          Length = 271

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)

Query: 54  LDQPYGLRFVKGRDGGTYIDAIAPGGAADKAGVFTVGDKVLATSAVFGTEIWPAAEYGRT 113
           +D+P GL   + + GG  I  +  GG A KAG+ + GD+V+ TS+ FG E+WPA + G T
Sbjct: 90  VDKPLGLTLGQKQGGGVVITGVDGGGNAAKAGLKS-GDQVVYTSSFFGDELWPADKLGFT 148

Query: 114 MYTIRQR 120
              I+ +
Sbjct: 149 KTAIQAK 155