Miyakogusa Predicted Gene

Lj4g3v2631020.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2631020.1 tr|G7L820|G7L820_MEDTR
Carboxyl-terminal-processing protease OS=Medicago truncatula
GN=MTR_8g088150 ,78.53,0,ClpP/crotonase,NULL; PDZ domain-like,PDZ
domain; seg,NULL; Domain present in PSD-95, Dlg, and
ZO-1/2,CUFF.51405.1
         (468 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46390.2 | Symbols:  | Peptidase S41 family protein | chr5:18...   572   e-163
AT5G46390.1 | Symbols:  | Peptidase S41 family protein | chr5:18...   408   e-114
AT4G17740.2 | Symbols:  | Peptidase S41 family protein | chr4:98...   211   1e-54
AT4G17740.1 | Symbols:  | Peptidase S41 family protein | chr4:98...   210   1e-54
AT3G57680.1 | Symbols:  | Peptidase S41 family protein | chr3:21...   204   1e-52

>AT5G46390.2 | Symbols:  | Peptidase S41 family protein |
           chr5:18816612-18819148 FORWARD LENGTH=489
          Length = 489

 Score =  572 bits (1474), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 267/379 (70%), Positives = 328/379 (86%)

Query: 89  EDTVQTVVTNEGLVEEAWQIVNDSFLDTGRHRWSQDTWQLKREDILGNSIPTRSKAHQII 148
           +D    +VTNEG+VEEAW+IVN +FLDT  H W+ +TWQ +++DIL + I +RSKAH++I
Sbjct: 110 DDIEPQLVTNEGIVEEAWEIVNGAFLDTRSHSWTPETWQKQKDDILASPIKSRSKAHEVI 169

Query: 149 KRMLASLGDPYTRFLSPEEFSKMARYDMTGIGINLRELPDENGDLRMKVLGIILDGPAHS 208
           K MLASLGD YTRFLSP+EFS+M++YD+TGIGINLRE+ D  G++++KVLG++LD  A  
Sbjct: 170 KNMLASLGDQYTRFLSPDEFSRMSKYDITGIGINLREVSDGGGNVKLKVLGLVLDSAADI 229

Query: 209 AGVRQGDEILAVNNMEVKGKSAFEVSTLLQGPNGTSVTIQVKHGNCGPVELIEVQRQLVA 268
           AGV+QGDEILAVN M+V GKS+FEVS+LLQGP+ T V ++VKHG CGPV+ +++QRQ+ A
Sbjct: 230 AGVKQGDEILAVNGMDVSGKSSFEVSSLLQGPSKTFVVLKVKHGKCGPVKSLKIQRQVNA 289

Query: 269 RTPVSYRLEQTEGGATPVGYLRLKEFNALARKDLVIAMKRLQDMGASYFVLDLRDNLGGL 328
           +TPVSYRLE+ + G   VGY+RLKEFNALARKDLVIAMKRL D GASYFV+DLRDNLGGL
Sbjct: 290 QTPVSYRLEKVDNGTVSVGYIRLKEFNALARKDLVIAMKRLLDKGASYFVMDLRDNLGGL 349

Query: 329 VQAGIEISKLFLKEGDTVISTVGRDPQFQDAIVADTSPLIQAPVIVLVNDKTASASEIVA 388
           VQAGIE +KLFL EGDTVI T GRDP+ Q  +V+D  PLI AP+IV+VN++TASASEIVA
Sbjct: 350 VQAGIETAKLFLDEGDTVIYTAGRDPEAQKTVVSDKKPLITAPLIVMVNNRTASASEIVA 409

Query: 389 SALHDNCKAVLVGKRTYGKGLIQSVFELQDGSGVVITVGKYVTPNHNDINGNGIEPDFQK 448
           SALHDNCKAVLVG+RTYGKGLIQSV+EL+DGSGVV+T+GKYVTPNH DING GIEPDF+ 
Sbjct: 410 SALHDNCKAVLVGERTYGKGLIQSVYELRDGSGVVVTIGKYVTPNHMDINGGGIEPDFRN 469

Query: 449 LPAWDDVTQRLSKCSMLQK 467
           LPAWD+V +RLSKCS+LQ+
Sbjct: 470 LPAWDEVKERLSKCSILQQ 488


>AT5G46390.1 | Symbols:  | Peptidase S41 family protein |
           chr5:18816612-18818605 FORWARD LENGTH=428
          Length = 428

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 191/286 (66%), Positives = 239/286 (83%)

Query: 89  EDTVQTVVTNEGLVEEAWQIVNDSFLDTGRHRWSQDTWQLKREDILGNSIPTRSKAHQII 148
           +D    +VTNEG+VEEAW+IVN +FLDT  H W+ +TWQ +++DIL + I +RSKAH++I
Sbjct: 110 DDIEPQLVTNEGIVEEAWEIVNGAFLDTRSHSWTPETWQKQKDDILASPIKSRSKAHEVI 169

Query: 149 KRMLASLGDPYTRFLSPEEFSKMARYDMTGIGINLRELPDENGDLRMKVLGIILDGPAHS 208
           K MLASLGD YTRFLSP+EFS+M++YD+TGIGINLRE+ D  G++++KVLG++LD  A  
Sbjct: 170 KNMLASLGDQYTRFLSPDEFSRMSKYDITGIGINLREVSDGGGNVKLKVLGLVLDSAADI 229

Query: 209 AGVRQGDEILAVNNMEVKGKSAFEVSTLLQGPNGTSVTIQVKHGNCGPVELIEVQRQLVA 268
           AGV+QGDEILAVN M+V GKS+FEVS+LLQGP+ T V ++VKHG CGPV+ +++QRQ+ A
Sbjct: 230 AGVKQGDEILAVNGMDVSGKSSFEVSSLLQGPSKTFVVLKVKHGKCGPVKSLKIQRQVNA 289

Query: 269 RTPVSYRLEQTEGGATPVGYLRLKEFNALARKDLVIAMKRLQDMGASYFVLDLRDNLGGL 328
           +TPVSYRLE+ + G   VGY+RLKEFNALARKDLVIAMKRL D GASYFV+DLRDNLGGL
Sbjct: 290 QTPVSYRLEKVDNGTVSVGYIRLKEFNALARKDLVIAMKRLLDKGASYFVMDLRDNLGGL 349

Query: 329 VQAGIEISKLFLKEGDTVISTVGRDPQFQDAIVADTSPLIQAPVIV 374
           VQAGIE +KLFL EGDTVI T GRDP+ Q  +V+D  PLI AP+IV
Sbjct: 350 VQAGIETAKLFLDEGDTVIYTAGRDPEAQKTVVSDKKPLITAPLIV 395


>AT4G17740.2 | Symbols:  | Peptidase S41 family protein |
           chr4:9867088-9869719 REVERSE LENGTH=505
          Length = 505

 Score =  211 bits (536), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/355 (36%), Positives = 203/355 (57%), Gaps = 17/355 (4%)

Query: 101 LVEEAWQIVNDSFLDTGRHRWSQDTWQLKREDILGNS-IPTRSKAHQIIKRMLASLGDPY 159
           L  EAW+ ++ +++D     ++  +W   RE  L N  + TR + +  IK+M+A+L DP+
Sbjct: 123 LFLEAWRTIDRAYID---KTFNGQSWFRYRETALRNEPMNTREETYMAIKKMVATLDDPF 179

Query: 160 TRFLSPEEFSKM---ARYDMTGIGINLRELPDENGD-LRMKVLGIILDGPAHSAGVRQGD 215
           TRFL P +F  +    +  +TG+G+++      +G    + V+     GPA+ AG+  GD
Sbjct: 180 TRFLEPGKFKSLRSGTQGAVTGVGLSIGYPTASDGPPAGLVVISAAPGGPANRAGILPGD 239

Query: 216 EILAVNNMEVKGKSAFEVSTLLQGPNGTSVTIQVKHGNCGPVELIEVQRQLVARTPVSYR 275
            I  ++N   +  + ++ + +LQGP G++V + ++ G      L+ + R+ V+  PV  R
Sbjct: 240 VIQGIDNTTTETLTIYDAAQMLQGPEGSAVELAIRSGP--ETRLLTLTRERVSVNPVKSR 297

Query: 276 LEQTEGGAT---PVGYLRLKEFNALARKDLVIAMKRLQDMGASYFVLDLRDNLGGLVQAG 332
           L +  G  +    +GY++L  FN  A   +  A++ L+    + FVLDLRDN GG    G
Sbjct: 298 LCELPGSGSNSPKIGYIKLTTFNQNASSAVREAIETLRGNNVNAFVLDLRDNSGGSFPEG 357

Query: 333 IEISKLFLKEGDTVISTVGRDPQFQDAIVADTSPLIQA--PVIVLVNDKTASASEIVASA 390
           IEI+K +L +G  VI  +      +D    D S  I    P+ VLVN  TASASEI+A A
Sbjct: 358 IEIAKFWLDKG--VIVYICDSRGVRDIYDTDGSNAIATSEPLAVLVNKGTASASEILAGA 415

Query: 391 LHDNCKAVLVGKRTYGKGLIQSVFELQDGSGVVITVGKYVTPNHNDINGNGIEPD 445
           L DN +A++ G+ TYGKG IQSVFEL DGSG+ +TV +Y TP H DI+  G+ PD
Sbjct: 416 LKDNKRALVYGEPTYGKGKIQSVFELSDGSGLAVTVARYETPAHTDIDKVGVTPD 470


>AT4G17740.1 | Symbols:  | Peptidase S41 family protein |
           chr4:9867088-9869719 REVERSE LENGTH=515
          Length = 515

 Score =  210 bits (535), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/355 (36%), Positives = 203/355 (57%), Gaps = 17/355 (4%)

Query: 101 LVEEAWQIVNDSFLDTGRHRWSQDTWQLKREDILGNS-IPTRSKAHQIIKRMLASLGDPY 159
           L  EAW+ ++ +++D     ++  +W   RE  L N  + TR + +  IK+M+A+L DP+
Sbjct: 133 LFLEAWRTIDRAYID---KTFNGQSWFRYRETALRNEPMNTREETYMAIKKMVATLDDPF 189

Query: 160 TRFLSPEEFSKM---ARYDMTGIGINLRELPDENGD-LRMKVLGIILDGPAHSAGVRQGD 215
           TRFL P +F  +    +  +TG+G+++      +G    + V+     GPA+ AG+  GD
Sbjct: 190 TRFLEPGKFKSLRSGTQGAVTGVGLSIGYPTASDGPPAGLVVISAAPGGPANRAGILPGD 249

Query: 216 EILAVNNMEVKGKSAFEVSTLLQGPNGTSVTIQVKHGNCGPVELIEVQRQLVARTPVSYR 275
            I  ++N   +  + ++ + +LQGP G++V + ++ G      L+ + R+ V+  PV  R
Sbjct: 250 VIQGIDNTTTETLTIYDAAQMLQGPEGSAVELAIRSGP--ETRLLTLTRERVSVNPVKSR 307

Query: 276 LEQTEGGAT---PVGYLRLKEFNALARKDLVIAMKRLQDMGASYFVLDLRDNLGGLVQAG 332
           L +  G  +    +GY++L  FN  A   +  A++ L+    + FVLDLRDN GG    G
Sbjct: 308 LCELPGSGSNSPKIGYIKLTTFNQNASSAVREAIETLRGNNVNAFVLDLRDNSGGSFPEG 367

Query: 333 IEISKLFLKEGDTVISTVGRDPQFQDAIVADTSPLIQA--PVIVLVNDKTASASEIVASA 390
           IEI+K +L +G  VI  +      +D    D S  I    P+ VLVN  TASASEI+A A
Sbjct: 368 IEIAKFWLDKG--VIVYICDSRGVRDIYDTDGSNAIATSEPLAVLVNKGTASASEILAGA 425

Query: 391 LHDNCKAVLVGKRTYGKGLIQSVFELQDGSGVVITVGKYVTPNHNDINGNGIEPD 445
           L DN +A++ G+ TYGKG IQSVFEL DGSG+ +TV +Y TP H DI+  G+ PD
Sbjct: 426 LKDNKRALVYGEPTYGKGKIQSVFELSDGSGLAVTVARYETPAHTDIDKVGVTPD 480


>AT3G57680.1 | Symbols:  | Peptidase S41 family protein |
           chr3:21381054-21383629 FORWARD LENGTH=519
          Length = 519

 Score =  204 bits (519), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 211/365 (57%), Gaps = 18/365 (4%)

Query: 95  VVTNEGLVEEAWQIVNDSFLDTGRHRWSQDTWQLKREDILGNSIPTRSK--AHQIIKRML 152
           V T +  + EAW ++ ++F+D     ++   W  K +  +    P RS   A+  +K ML
Sbjct: 114 VTTVQRTLVEAWGLIRETFVDP---TFNHQDWDFKLQQTMVEMFPLRSADAAYGKLKAML 170

Query: 153 ASLGDPYTRFLSPEEFSKM---ARYDMTGIGINLRELPDENGDLRMKVLGIILDGPAHSA 209
           ++LGDP+TR ++P+E+      +  ++ G+G+ +   P       + V+  +   PA  A
Sbjct: 171 STLGDPFTRLITPKEYQSFRIGSDGNLQGVGLFINSEPRTG---HLVVMSCVEGSPADRA 227

Query: 210 GVRQGDEILAVNNMEVKGKSAFEVSTLLQGPNGTSVTIQVKH----GNCGPVELIEVQRQ 265
           G+ +G+E++ +N  ++    +   +  L+G  GT VTI++K+    G    +  +++ R 
Sbjct: 228 GIHEGEELVEINGEKLDDVDSEAAAQKLRGRVGTFVTIKLKNVNGSGTDSGIREVKLPRD 287

Query: 266 LVARTPVSYRL---EQTEGGATPVGYLRLKEFNALARKDLVIAMKRLQDMGASYFVLDLR 322
            +  +P+S  +      +G     GY++L  F+  A  D+  A+  +++     ++LDLR
Sbjct: 288 YIKLSPISSAIIPHTTPDGRLAKTGYVKLTAFSQTAASDMENAVHEMENQDVQSYILDLR 347

Query: 323 DNLGGLVQAGIEISKLFLKEGDTVISTVGRDPQFQDAIVADTSPLIQAPVIVLVNDKTAS 382
           +N GGLV+AG+++++L+L   +T++ T+ R+       + +   +   P++VLVN+ +AS
Sbjct: 348 NNPGGLVRAGLDVAQLWLDGDETLVYTIDREGVTSPINMINGHAVTHDPLVVLVNEGSAS 407

Query: 383 ASEIVASALHDNCKAVLVGKRTYGKGLIQSVFELQDGSGVVITVGKYVTPNHNDINGNGI 442
           ASEI+A ALHDN +A+LVG RT+GKG IQS+ EL DGS + +TV KY++P+ ++I+  GI
Sbjct: 408 ASEILAGALHDNGRAILVGNRTFGKGKIQSITELNDGSALFVTVAKYLSPSLHEIDQVGI 467

Query: 443 EPDFQ 447
            PD Q
Sbjct: 468 APDVQ 472