Miyakogusa Predicted Gene

Lj4g3v2628860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2628860.1 tr|Q6L4D2|Q6L4D2_ORYSJ Os05g0381400 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0088M05.8 PE=2
,43.23,4e-19,AWPM-19,AWPM-19-like; seg,NULL,CUFF.51395.1
         (160 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G46530.1 | Symbols:  | AWPM-19-like family protein | chr5:188...   210   4e-55
AT1G29520.1 | Symbols:  | AWPM-19-like family protein | chr1:103...   208   1e-54
AT5G18970.1 | Symbols:  | AWPM-19-like family protein | chr5:633...   108   1e-24
AT1G04560.1 | Symbols:  | AWPM-19-like family protein | chr1:124...    91   3e-19

>AT5G46530.1 | Symbols:  | AWPM-19-like family protein |
           chr5:18875576-18876779 FORWARD LENGTH=157
          Length = 157

 Score =  210 bits (534), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 100/154 (64%), Positives = 119/154 (77%)

Query: 1   MANEQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMG 60
           M   QMKP+A+ LL LNFCMY IVLGIG W+MN+AI+ GF+IG +  LPAHFSPI FPMG
Sbjct: 1   MVEHQMKPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMG 60

Query: 61  NASTGFFVTFALXXXXXXXXXXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWK 120
           NA+TGFF+ FAL              +H++SWT  SLP+A S AT+AW+LTLLAMGF  K
Sbjct: 61  NAATGFFIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCK 120

Query: 121 EVELRIRNARLKTMEAFLIILSATQLFYIAAIHG 154
           E+EL +RNARL+TMEAFLIILSATQL YIAAI+G
Sbjct: 121 EIELGMRNARLRTMEAFLIILSATQLLYIAAIYG 154


>AT1G29520.1 | Symbols:  | AWPM-19-like family protein |
           chr1:10323735-10324525 FORWARD LENGTH=158
          Length = 158

 Score =  208 bits (530), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/154 (71%), Positives = 127/154 (82%)

Query: 1   MANEQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMG 60
           MA EQ+KP+A+ LL LNFCMYVIVLGIGGWAMNRAID GF +GP L+LPAHFSPI+FPMG
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NASTGFFVTFALXXXXXXXXXXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWK 120
           NA+TGFFV FAL              +HIRSWT  SLP+AA+ AT+AWTLT+LAMGFAWK
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 EVELRIRNARLKTMEAFLIILSATQLFYIAAIHG 154
           E+EL+ RNA+L+TMEAFLIILS TQL YIAA+HG
Sbjct: 121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHG 154


>AT5G18970.1 | Symbols:  | AWPM-19-like family protein |
           chr5:6333714-6334539 REVERSE LENGTH=171
          Length = 171

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 86/153 (56%)

Query: 1   MANEQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMG 60
           MA+   K  A +LL LN  +Y ++  I  WA+N  I++       L LPA   PI+FP+G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NASTGFFVTFALXXXXXXXXXXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWK 120
           N +TGFFV F L               ++  W + +L SAA+ + ++W+LTLLAMG A K
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 EVELRIRNARLKTMEAFLIILSATQLFYIAAIH 153
           E+ +    A L+T+E   II+SATQL    AIH
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIH 153


>AT1G04560.1 | Symbols:  | AWPM-19-like family protein |
           chr1:1245070-1245888 FORWARD LENGTH=186
          Length = 186

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 14/154 (9%)

Query: 1   MANEQMKPIATLLLGLNFCMYVIVLGIGGWAMNRAIDQGFIIGPELQLPAHFSPIFFPMG 60
           MA    + IA  LL LN  MY+IVLG   W +N+ I+ G    P               G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYIN-GQTNHPSFG------------G 47

Query: 61  NASTGFFVTFALXXXXXXXXXXXXXXNHIRSWTAESLPSAASVATMAWTLTLLAMGFAWK 120
           N +T FF+TF++              NHIR W  +SL +A + + +AW +T LAMG A K
Sbjct: 48  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 107

Query: 121 EVELRI-RNARLKTMEAFLIILSATQLFYIAAIH 153
           ++ +   R  RLK +EAF+IIL+ TQL Y+  IH
Sbjct: 108 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIH 141