Miyakogusa Predicted Gene

Lj4g3v2618560.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2618560.1 tr|A9SN34|A9SN34_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,34.75,3e-18,seg,NULL; BERNARDINELLI-SEIP CONGENITAL
LIPODYSTROPHY 2 HOMOLOG (BSCL2 PROTEIN),NULL;
Seipin,Adipose,CUFF.51351.1
         (555 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G29760.1 | Symbols:  | Putative adipose-regulatory protein (S...   358   6e-99
AT2G34380.1 | Symbols:  | Putative adipose-regulatory protein (S...   309   4e-84
AT5G16460.1 | Symbols:  | Putative adipose-regulatory protein (S...   146   3e-35

>AT1G29760.1 | Symbols:  | Putative adipose-regulatory protein
           (Seipin) | chr1:10422381-10424116 FORWARD LENGTH=526
          Length = 526

 Score =  358 bits (918), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 198/459 (43%), Positives = 275/459 (59%), Gaps = 13/459 (2%)

Query: 93  ENENSPKKIDSDEAKIRSFEEGNEE--STITTASHDEGPGDSADSVAAETGGSPEKIDSD 150
           E E S      D  +  S+ E N E    I T+   E   DS D +++E     + I S 
Sbjct: 62  ETEPSSSSDGFDVGEKSSYVEKNAELRGDIDTSDVIESTKDSID-LSSEKENDLDVISSS 120

Query: 151 EEKLRSIPPPSVVTEERNEESTITTASHDDEGPGDSADSVAADHGDSPSSS----LEFVA 206
              +  I       +   EEST+TT S DD+G  D A SV     + P+S+    L F+ 
Sbjct: 121 GNDMDVIDSGRNRVDPFQEESTVTTVSSDDQGDDDYAGSVPQ-FREPPNSTEWSLLGFLV 179

Query: 207 GLVIRVIMMQIKVFIFFVKSPVLLLFHGCMFFVDPFGTIRKGKSFFME----ILDRVWGC 262
           GLVI+ I  Q+      +  P  LL +  +FF DPF TIR G+ F M     I D ++G 
Sbjct: 180 GLVIKAIEFQVSFMTSLLTFPPWLLRNCFLFFFDPFSTIRFGRRFLMARVAGISDMIFGY 239

Query: 263 VSAQGLFSEQNSFWNVAFRCGWGFLWSIYVCCIXXXXXXXXXXXXXXXMKYLVEKPLQMK 322
           ++   L  +     ++  + GWG  W++YV  +               +  + +KP ++K
Sbjct: 240 MNPFRL-KDTKQMLSIVCKFGWGMFWAVYVGIVLFGLLVSSLMIGGYVINRIADKPFEVK 298

Query: 323 QVLNFDFTKQSPVAFVPVISCAGVGGGDDPENDLAVGKWMSRRVIPPKQKVQVTVALLVP 382
           + LNFD+TK SP A+VP+ SCAGV      +    + K    RVIP  QK+ + +++ +P
Sbjct: 299 ETLNFDYTKNSPEAYVPISSCAGVECEGSCKESNEMSKIRGLRVIPRDQKLDIILSMTLP 358

Query: 383 ESEYNTHLGIFQVRVDFLSYEGKTIASSSQPCMLKFRSEPIRLITTFLKIVPLVTGYGSE 442
           ES YN +LG+FQVRVDFLS +G+TIAS  +PCML+FRSEPIRL+ TF K+VPLVTGY SE
Sbjct: 359 ESAYNKNLGMFQVRVDFLSVDGQTIASIRRPCMLRFRSEPIRLVQTFFKVVPLVTGYVSE 418

Query: 443 TQTLKAKMRGFVEGDIPTSCLKVTLEQRAEYLPGAGIPQMYDSSIIVESELPFFKRIIWH 502
            QTL  K++GFVE DIPT+CLK+ +EQRAE+ PGAGIP++YD+S+ VES LPFF++IIW 
Sbjct: 419 IQTLSLKLKGFVEKDIPTACLKIIIEQRAEFRPGAGIPELYDASLSVESGLPFFRKIIWK 478

Query: 503 WKMSIFIWITMMAFMMELLFVLVCCWPIIIPRTRQRSGS 541
           W+ ++F+WI+M  F+ ELLF LVCC P+IIPRT+ R  S
Sbjct: 479 WRKTLFVWISMSLFITELLFTLVCCRPLIIPRTQPRDRS 517


>AT2G34380.1 | Symbols:  | Putative adipose-regulatory protein
           (Seipin) | chr2:14512777-14514306 FORWARD LENGTH=509
          Length = 509

 Score =  309 bits (791), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 156/347 (44%), Positives = 216/347 (62%), Gaps = 11/347 (3%)

Query: 205 VAGLVIRVIMMQIKVFIFFVKSPVLLLFHGCMFFVDPFGTIRKGKSFFMEILDRVWGCVS 264
           +  LVIR I  Q+ + I F++ P  L+     F  DP+ T+R+G+ + +      W    
Sbjct: 162 LTSLVIRSIEFQVSLMITFIRFPPWLISKCLSFVFDPYRTMRRGRRYLVS-----WIVGL 216

Query: 265 AQGLFSEQNSFWNVAFRCGWGFLWSIYVCCIXXXXXXXXXXXXXXXMKYLVEKPLQMKQV 324
                 +      +  R  WG   ++YV  +               + YL  +PL +K+ 
Sbjct: 217 CDSGLKDDKPVLELVRRVTWGLFCAVYVGIMLFALLVSAFMISGFVITYLAHEPLVIKES 276

Query: 325 LNFDFTKQSPVAFVPVISCAGVGGGDDPENDLAVGKWMSRRVIPPKQKVQVTVALLVPES 384
           LNFD+TK SP A+VP+ SCAGV  G   +  +  GK     V   K + ++TV++ +PES
Sbjct: 277 LNFDYTKSSPEAYVPISSCAGVAFGLSGKESIETGK-----VKGLKDRTEITVSMTLPES 331

Query: 385 EYNTHLGIFQVRVDFLSYEGKTIASSSQPCMLKFRSEPIRLITTFLKIVPLVTGYGSETQ 444
           EYN +LG+FQVRVDFLS  G  +ASS +PCM+KF SEPIRL+ T LKI PLVTGY SE Q
Sbjct: 332 EYNRNLGMFQVRVDFLSASGHVLASSRRPCMVKFSSEPIRLVQTLLKIAPLVTGYVSEIQ 391

Query: 445 TLKAKMRGFVEGDI-PTSCLKVTLEQRAEYLPGAGIPQMYDSSIIVESELPFFKRIIWHW 503
           TL  K++G VE DI PT+CLK+ +EQRAE+ PGAGIP++YD+S+ +ES+LPF KRIIW+W
Sbjct: 392 TLNLKLKGLVEKDIIPTACLKIMIEQRAEFRPGAGIPEIYDASLFLESKLPFLKRIIWNW 451

Query: 504 KMSIFIWITMMAFMMELLFVLVCCWPIIIPRTRQRSGSARGDGTQNN 550
           + ++F+WI+M  F+MELLF LV   P+IIPRT QR+    G  + NN
Sbjct: 452 RKTLFVWISMSLFIMELLFALVFFRPLIIPRTGQRTQQRDGTHSINN 498


>AT5G16460.1 | Symbols:  | Putative adipose-regulatory protein
           (Seipin) | chr5:5377085-5378533 REVERSE LENGTH=368
          Length = 368

 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 141/265 (53%), Gaps = 21/265 (7%)

Query: 277 NVAFRCGWGFLWSIYVCCIXXXXXXXXXXXXXXXMKYLVEKPLQMKQVLNFDFTKQSPVA 336
            V  R  +G L + +V  +               +   VEKP+ ++  L FD+T+++P  
Sbjct: 83  RVVRRTWFGILGACHVSMVMVLALILAVVIGVGIVSLYVEKPVVVRDRLFFDYTEENP-- 140

Query: 337 FVPVISCAGVGGGDDPENDLAVGKWMSRRVIPPKQKVQVTVALLVPESEYNTHLGIFQVR 396
                  + V   D  +   +V         P    V V++ L +PESE N  +G+FQ++
Sbjct: 141 -------SAVFSFDKKKRSFSV---------PVGHSVHVSLVLWMPESEINRRIGVFQLK 184

Query: 397 VDFLSYEGKTIASSSQPCMLKFRSEPIRLITTFLKIVPLVTGYGSETQTLKAKMRGFVEG 456
           V+ LS +G+TIA SSQPCML+FRS+PIRL  TF+  VPL+ G  +E QT++       E 
Sbjct: 185 VELLSLKGETIARSSQPCMLRFRSKPIRLARTFVMSVPLIAGIANEAQTMRIDALKHQEK 244

Query: 457 DIPTSCLKVTLEQRAEYLPGAGIPQMYDSSIIVESELPFFKRIIWHWKMSIFIWITMMAF 516
              T  ++ TL  RA+      +PQ+Y++ I++ S+ P+ KR+ ++WK ++ +W +M  +
Sbjct: 245 MPRTKAVRATLIPRAQ---TRTLPQLYEAEIVINSKPPWIKRMAYNWKWTLCVWTSMYLY 301

Query: 517 MMELLFVLVCCWPIIIPRTRQRSGS 541
           +  L  +L C  P++ P T  R+ S
Sbjct: 302 VAILTALLWCFRPVLFPYTSSRTIS 326