Miyakogusa Predicted Gene

Lj4g3v2606080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2606080.1 tr|B9MTA3|B9MTA3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_675990 PE=4
SV=1,41.22,4e-18,seg,NULL; DUF1685,Protein of unknown function
DUF1685,CUFF.51317.1
         (248 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42760.1 | Symbols:  | unknown protein; CONTAINS InterPro DOM...   130   6e-31
AT1G05870.4 | Symbols:  | Protein of unknown function (DUF1685) ...    55   3e-08
AT1G05870.3 | Symbols:  | Protein of unknown function (DUF1685) ...    55   3e-08
AT1G05870.2 | Symbols:  | Protein of unknown function (DUF1685) ...    55   3e-08
AT1G05870.1 | Symbols:  | Protein of unknown function (DUF1685) ...    55   3e-08
AT2G31560.2 | Symbols:  | Protein of unknown function (DUF1685) ...    55   4e-08
AT2G31560.1 | Symbols:  | Protein of unknown function (DUF1685) ...    55   4e-08

>AT2G42760.1 | Symbols:  | unknown protein; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF1685
           (InterPro:IPR012881); Has 170 Blast hits to 164 proteins
           in 34 species: Archae - 0; Bacteria - 1; Metazoa - 26;
           Fungi - 10; Plants - 107; Viruses - 0; Other Eukaryotes
           - 26 (source: NCBI BLink). | chr2:17796382-17797185
           REVERSE LENGTH=267
          Length = 267

 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/184 (46%), Positives = 108/184 (58%), Gaps = 20/184 (10%)

Query: 79  PNSVL-LAP---KLQTIFSGKEVVDSEAEETPVVQHHEVLLSEKNNNGNSTSCEKKKKNR 134
           P SVL + P   KLQTI SGKEV          +   E LLSEK         +   + R
Sbjct: 89  PRSVLPVKPTPMKLQTILSGKEV------NAFTIAERERLLSEKEEQRKKKKKKSNVRTR 142

Query: 135 GSKSLSDLEFEELKGFMDLGFVFSLED-KNSSLASIIPGLQRLGKKXXXXXXXXXXXDSN 193
             KS+SDLE+EELKGFMDLGFVFS +D K+S L SI+PGLQRL KK           +  
Sbjct: 143 KGKSMSDLEYEELKGFMDLGFVFSEDDHKDSDLVSILPGLQRLVKKDDGVTKEEEEEEEE 202

Query: 194 ESL----VPRPYLSEAWEFHGKRKKE---NPLMNWKV--PSLKNEIDMKDSLRLWAHTVA 244
           + +      RPYLSEAW+  G RK +    P + W+V  P+  +E+D+KD+LRLWAH VA
Sbjct: 203 DKIGGNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNLRLWAHAVA 262

Query: 245 STVR 248
           ST+R
Sbjct: 263 STIR 266


>AT1G05870.4 | Symbols:  | Protein of unknown function (DUF1685) |
           chr1:1772454-1773228 REVERSE LENGTH=189
          Length = 189

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 109 QHHEVLLSEKNNNGNSTSCEKKKKN-RGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLA 167
           +  +VLL       +S+S + +K +   SKSL+D + E+L+G +DLGF FS  D+   L 
Sbjct: 53  KKSQVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSY-DEIPELC 111

Query: 168 SIIPGLQ---RLGKKXXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVP 224
           + +P L+    + +K            S+    P P L  A           P+ NWK+ 
Sbjct: 112 NTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVTA----------TPIANWKIS 161

Query: 225 SL-KNEIDMKDSLRLWAHTVASTVR 248
           S   N  D+K  L+ WA  VA TV+
Sbjct: 162 SPGDNPDDVKARLKYWAQAVACTVQ 186


>AT1G05870.3 | Symbols:  | Protein of unknown function (DUF1685) |
           chr1:1772454-1773228 REVERSE LENGTH=189
          Length = 189

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 109 QHHEVLLSEKNNNGNSTSCEKKKKN-RGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLA 167
           +  +VLL       +S+S + +K +   SKSL+D + E+L+G +DLGF FS  D+   L 
Sbjct: 53  KKSQVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSY-DEIPELC 111

Query: 168 SIIPGLQ---RLGKKXXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVP 224
           + +P L+    + +K            S+    P P L  A           P+ NWK+ 
Sbjct: 112 NTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVTA----------TPIANWKIS 161

Query: 225 SL-KNEIDMKDSLRLWAHTVASTVR 248
           S   N  D+K  L+ WA  VA TV+
Sbjct: 162 SPGDNPDDVKARLKYWAQAVACTVQ 186


>AT1G05870.2 | Symbols:  | Protein of unknown function (DUF1685) |
           chr1:1772454-1773228 REVERSE LENGTH=189
          Length = 189

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 109 QHHEVLLSEKNNNGNSTSCEKKKKN-RGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLA 167
           +  +VLL       +S+S + +K +   SKSL+D + E+L+G +DLGF FS  D+   L 
Sbjct: 53  KKSQVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSY-DEIPELC 111

Query: 168 SIIPGLQ---RLGKKXXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVP 224
           + +P L+    + +K            S+    P P L  A           P+ NWK+ 
Sbjct: 112 NTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVTA----------TPIANWKIS 161

Query: 225 SL-KNEIDMKDSLRLWAHTVASTVR 248
           S   N  D+K  L+ WA  VA TV+
Sbjct: 162 SPGDNPDDVKARLKYWAQAVACTVQ 186


>AT1G05870.1 | Symbols:  | Protein of unknown function (DUF1685) |
           chr1:1772454-1773228 REVERSE LENGTH=189
          Length = 189

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 109 QHHEVLLSEKNNNGNSTSCEKKKKN-RGSKSLSDLEFEELKGFMDLGFVFSLEDKNSSLA 167
           +  +VLL       +S+S + +K +   SKSL+D + E+L+G +DLGF FS  D+   L 
Sbjct: 53  KKSQVLLEGYVETASSSSVDDQKDDLTRSKSLTDDDLEDLRGCLDLGFGFSY-DEIPELC 111

Query: 168 SIIPGLQ---RLGKKXXXXXXXXXXXDSNESLVPRPYLSEAWEFHGKRKKENPLMNWKVP 224
           + +P L+    + +K            S+    P P L  A           P+ NWK+ 
Sbjct: 112 NTLPALELCYSMSQKFLDDKQNKSPETSSVEDCPSPPLVTA----------TPIANWKIS 161

Query: 225 SL-KNEIDMKDSLRLWAHTVASTVR 248
           S   N  D+K  L+ WA  VA TV+
Sbjct: 162 SPGDNPDDVKARLKYWAQAVACTVQ 186


>AT2G31560.2 | Symbols:  | Protein of unknown function (DUF1685) |
           chr2:13436611-13437312 FORWARD LENGTH=202
          Length = 202

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 30/124 (24%)

Query: 136 SKSLSDLEFEELKGFMDLGFVFSLEDKNSSLASIIPGLQRLGKKXXXXXXXXXXXDSNES 195
           +KSL+D + EELKG +DLGF FS  D+   L + +P L+                     
Sbjct: 95  AKSLTDDDLEELKGCLDLGFGFSY-DEIPELCNTLPALELCYS----------------- 136

Query: 196 LVPRPYLSEAWEFHGKRKKEN----------PLMNWKVPSLKNEI-DMKDSLRLWAHTVA 244
            + + +L +  + H K ++E+          P+ NWK+ S  ++  D+K  L+ WA TVA
Sbjct: 137 -MSQKFLDDKQQNHHKSQEEDDSSPPPTTTAPIANWKISSPGDDPDDVKARLKYWAQTVA 195

Query: 245 STVR 248
            TVR
Sbjct: 196 CTVR 199


>AT2G31560.1 | Symbols:  | Protein of unknown function (DUF1685) |
           chr2:13436611-13437312 FORWARD LENGTH=202
          Length = 202

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 30/124 (24%)

Query: 136 SKSLSDLEFEELKGFMDLGFVFSLEDKNSSLASIIPGLQRLGKKXXXXXXXXXXXDSNES 195
           +KSL+D + EELKG +DLGF FS  D+   L + +P L+                     
Sbjct: 95  AKSLTDDDLEELKGCLDLGFGFSY-DEIPELCNTLPALELCYS----------------- 136

Query: 196 LVPRPYLSEAWEFHGKRKKEN----------PLMNWKVPSLKNEI-DMKDSLRLWAHTVA 244
            + + +L +  + H K ++E+          P+ NWK+ S  ++  D+K  L+ WA TVA
Sbjct: 137 -MSQKFLDDKQQNHHKSQEEDDSSPPPTTTAPIANWKISSPGDDPDDVKARLKYWAQTVA 195

Query: 245 STVR 248
            TVR
Sbjct: 196 CTVR 199