Miyakogusa Predicted Gene

Lj4g3v2605950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2605950.1 Non Chatacterized Hit- tr|G5AB42|G5AB42_PHYSP
Putative uncharacterized protein OS=Phytophthora sojae,27.24,9e-19,no
description,WD40/YVTN repeat-like-containing domain; WD40,WD40 repeat;
WD40 repeats,WD40 repeat;
,NODE_77264_length_1426_cov_26.746845.path2.1
         (321 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G45760.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   351   3e-97
AT5G45760.2 | Symbols:  | Transducin/WD40 repeat-like superfamil...   301   5e-82

>AT5G45760.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:18561121-18563005 FORWARD LENGTH=360
          Length = 360

 Score =  351 bits (901), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 177/324 (54%), Positives = 235/324 (72%), Gaps = 20/324 (6%)

Query: 1   MDVSTEAVVSLCFKPGKEDNIYVSSGKEINCFDVR-LATAKWEPLESYNYNKEEINKVTC 59
           +DV TE V SLCFK G E+ +Y S G EI  FDV  L+   W+PLESYNYNK+E+N+V C
Sbjct: 54  IDVGTEPVSSLCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVC 113

Query: 60  NSRSSFLAAADDSGEVKIIDIRQQCLHKTLRAGHTSICSSVEFLPWRSWEVISGGLDSAL 119
           N RSSFLA+ADDSG+VKIID+ Q+CL+KTLRAGHTSICSSV+F+PWR WEVI+GGLDS L
Sbjct: 114 NGRSSFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKL 173

Query: 120 VWWDFSNGRHNKIANFGNVSSSNAGQCYNPSFIHAIAVPETDMIDKLDKICXXXXXXXXX 179
           V WDFS GR  KI +FG+ +++N+GQC NP+F+H+IA+PE DM+DKLDKIC         
Sbjct: 174 VLWDFSKGRSQKIIDFGSDTNNNSGQCLNPAFVHSIAIPEMDMVDKLDKIC--------- 224

Query: 180 XXXXEAEIACMKSKGFSN--SRKGSQSRPKQGSSTSNTDADQNGRRRLQLDYTLGGHNAA 237
                   A  +  G  N  + +   SR    S  S++ +  N  +R+ LDY++GGHN+A
Sbjct: 225 --------AVARGDGIVNLINIESELSRKGTSSKGSSSSSSNNVVKRVCLDYSVGGHNSA 276

Query: 238 VSSLEFSLFGERGKFLVSGGNDRLVKVWNWSSYRDAGISDGNNDILHLNIGVPQKVNCLC 297
           VS + FSLF E+G+FL+SGGND+ VK+W+     D   ++ N+D+LHLNI + +KVN LC
Sbjct: 277 VSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLHLNINLSKKVNWLC 336

Query: 298 TTTADTDNLVVCDTSKTVKVYSVT 321
           T  +D++NLVVCDT++ VKVYS++
Sbjct: 337 TNQSDSENLVVCDTTRVVKVYSIS 360


>AT5G45760.2 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:18561121-18563005 FORWARD LENGTH=334
          Length = 334

 Score =  301 bits (770), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 159/324 (49%), Positives = 215/324 (66%), Gaps = 46/324 (14%)

Query: 1   MDVSTEAVVSLCFKPGKEDNIYVSSGKEINCFDVR-LATAKWEPLESYNYNKEEINKVTC 59
           +DV TE V SLCFK G E+ +Y S G EI  FDV  L+   W+PLESYNYNK+E+N+V C
Sbjct: 54  IDVGTEPVSSLCFKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVC 113

Query: 60  NSRSSFLAAADDSGEVKIIDIRQQCLHKTLRAGHTSICSSVEFLPWRSWEVISGGLDSAL 119
           N RSSFLA+ADDSG+VKIID+ Q+CL+KTLRAGHTSICSSV+F+PWR WE          
Sbjct: 114 NGRSSFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWE---------- 163

Query: 120 VWWDFSNGRHNKIANFGNVSSSNAGQCYNPSFIHAIAVPETDMIDKLDKICXXXXXXXXX 179
                           G+ +++N+GQC NP+F+H+IA+PE DM+DKLDKIC         
Sbjct: 164 ----------------GSDTNNNSGQCLNPAFVHSIAIPEMDMVDKLDKIC--------- 198

Query: 180 XXXXEAEIACMKSKGFSN--SRKGSQSRPKQGSSTSNTDADQNGRRRLQLDYTLGGHNAA 237
                   A  +  G  N  + +   SR    S  S++ +  N  +R+ LDY++GGHN+A
Sbjct: 199 --------AVARGDGIVNLINIESELSRKGTSSKGSSSSSSNNVVKRVCLDYSVGGHNSA 250

Query: 238 VSSLEFSLFGERGKFLVSGGNDRLVKVWNWSSYRDAGISDGNNDILHLNIGVPQKVNCLC 297
           VS + FSLF E+G+FL+SGGND+ VK+W+     D   ++ N+D+LHLNI + +KVN LC
Sbjct: 251 VSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLHLNINLSKKVNWLC 310

Query: 298 TTTADTDNLVVCDTSKTVKVYSVT 321
           T  +D++NLVVCDT++ VKVYS++
Sbjct: 311 TNQSDSENLVVCDTTRVVKVYSIS 334