Miyakogusa Predicted Gene

Lj4g3v2604650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2604650.1 Non Chatacterized Hit- tr|C6SXW0|C6SXW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25610
PE,86.81,0,DUF640,Domain of unknown function DUF640; seg,NULL; FAMILY
NOT NAMED,NULL,CUFF.51301.1
         (175 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF6...   226   5e-60
AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF6...   226   5e-60
AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF64...   208   1e-54
AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF64...   200   5e-52
AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF64...   199   9e-52
AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF64...   191   2e-49
AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF64...   186   5e-48
AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF64...   180   4e-46
AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF64...   179   6e-46
AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF64...   175   2e-44
AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF64...   171   3e-43

>AT2G42610.2 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  226 bits (577), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 103/123 (83%), Positives = 113/123 (91%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YESQKRRDWNTFGQYLKN+ P VP+S C+ NHVLDFLRYLDQFGKTKVH  GC+F+GQP 
Sbjct: 26  YESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQPE 85

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PPAPC CPLRQAWGSLDALIGRLRAAYEE+GG P+TNPF +GAIR+YLREV+ECQAKARG
Sbjct: 86  PPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKARG 145

Query: 164 IPY 166
           IPY
Sbjct: 146 IPY 148


>AT2G42610.1 | Symbols: LSH10 | Protein of unknown function (DUF640)
           | chr2:17748005-17748538 FORWARD LENGTH=177
          Length = 177

 Score =  226 bits (577), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 103/123 (83%), Positives = 113/123 (91%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YESQKRRDWNTFGQYLKN+ P VP+S C+ NHVLDFLRYLDQFGKTKVH  GC+F+GQP 
Sbjct: 26  YESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTKVHVPGCMFYGQPE 85

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PPAPC CPLRQAWGSLDALIGRLRAAYEE+GG P+TNPF +GAIR+YLREV+ECQAKARG
Sbjct: 86  PPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVYLREVRECQAKARG 145

Query: 164 IPY 166
           IPY
Sbjct: 146 IPY 148


>AT4G18610.1 | Symbols: LSH9 | Protein of unknown function (DUF640)
           | chr4:10250794-10251369 FORWARD LENGTH=191
          Length = 191

 Score =  208 bits (530), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 95/124 (76%), Positives = 107/124 (86%), Gaps = 1/124 (0%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YESQKRRDWNTF QYLK++ P + +SQ ++ HVL FLRYLDQFGKTKVH   C+FFGQP 
Sbjct: 38  YESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHHQACVFFGQPD 97

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEH-GGSPDTNPFGAGAIRLYLREVKECQAKAR 162
           PP PC CPL+QAWGSLDALIGRLRAAYEEH GGSPDTNPF  G+IR++LREV+E QAKAR
Sbjct: 98  PPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLREVRESQAKAR 157

Query: 163 GIPY 166
           GIPY
Sbjct: 158 GIPY 161


>AT1G78815.1 | Symbols: LSH7 | Protein of unknown function (DUF640)
           | chr1:29632054-29632641 REVERSE LENGTH=195
          Length = 195

 Score =  200 bits (508), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 89/123 (72%), Positives = 104/123 (84%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YESQKRRDWNTF QYL+N+ P V +SQC  NH+LDFL+YLDQFGKTKVH HGC+FFGQ  
Sbjct: 41  YESQKRRDWNTFCQYLRNQQPPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQVE 100

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           P   C CPL+QAWGSLDALIGRLRAA+EE+GG P+ NPF  G IR++LREV++ QAKARG
Sbjct: 101 PAGQCNCPLKQAWGSLDALIGRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKARG 160

Query: 164 IPY 166
           +PY
Sbjct: 161 VPY 163


>AT1G07090.1 | Symbols: LSH6 | Protein of unknown function (DUF640)
           | chr1:2174202-2174792 REVERSE LENGTH=196
          Length = 196

 Score =  199 bits (506), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 105/123 (85%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YESQKRRDWNTF QYLKN  P + LS+C+  HV++FL+YLDQFGKTKVH   C +FG   
Sbjct: 32  YESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPYFGHQQ 91

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PP+PC+CPL+QAWGSLDALIGRLRAAYEE+GG PD+NPF A A+R+YLREV+E QAKARG
Sbjct: 92  PPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQAKARG 151

Query: 164 IPY 166
           IPY
Sbjct: 152 IPY 154


>AT5G58500.1 | Symbols: LSH5 | Protein of unknown function (DUF640)
           | chr5:23645535-23646083 REVERSE LENGTH=182
          Length = 182

 Score =  191 bits (486), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/124 (70%), Positives = 106/124 (85%), Gaps = 1/124 (0%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YESQKRRDWNTF QYL+N  P + LS+C+  HVL+FL+YLDQFGKTKVH+  C FFGQP+
Sbjct: 20  YESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQFGKTKVHATACPFFGQPN 79

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGS-PDTNPFGAGAIRLYLREVKECQAKAR 162
           PP+ C CPL+QAWGSLDALIGRLRAA+EE GG  P++NPF A A+R+YL+EV++ QAKAR
Sbjct: 80  PPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAAKAVRIYLKEVRQTQAKAR 139

Query: 163 GIPY 166
           GIPY
Sbjct: 140 GIPY 143


>AT3G23290.2 | Symbols: LSH4 | Protein of unknown function (DUF640)
           | chr3:8326958-8328010 FORWARD LENGTH=195
          Length = 195

 Score =  186 bits (473), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 97/123 (78%), Positives = 111/123 (90%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YE+QKRRDWNTFGQYL+N  P + LS+C+  HVL+FLRYLDQFGKTKVH+H C FFG P+
Sbjct: 49  YENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPN 108

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PPAPCACPLRQAWGSLDALIGRLRAA+EE+GGSP+TNPFGA A+RLYLREV++ QAKARG
Sbjct: 109 PPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARG 168

Query: 164 IPY 166
           I Y
Sbjct: 169 ISY 171


>AT2G31160.1 | Symbols: LSH3 | Protein of unknown function (DUF640)
           | chr2:13277903-13278562 FORWARD LENGTH=219
          Length = 219

 Score =  180 bits (457), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 91/123 (73%), Positives = 109/123 (88%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YE+QKRRDWNTFGQYL+N  P + LS+C+  HVL+FLRYLDQFGKTKVH++ C F+G P+
Sbjct: 55  YENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPN 114

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PPAPC CPLRQAWGSLDALIGRLRAA+EE+GG P+TNPFGA A+RLYLREV++ Q+KARG
Sbjct: 115 PPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARG 174

Query: 164 IPY 166
           + Y
Sbjct: 175 VSY 177


>AT1G16910.1 | Symbols: LSH8 | Protein of unknown function (DUF640)
           | chr1:5785373-5785867 FORWARD LENGTH=164
          Length = 164

 Score =  179 bits (455), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 95/123 (77%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YESQK RDWNTF QYL  + P V + +C  NH+LDFL+  DQFGKTKVH  GC+FFGQ  
Sbjct: 24  YESQKSRDWNTFCQYLMTKMPPVHVWECESNHILDFLQSRDQFGKTKVHIQGCVFFGQKE 83

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PP  C CPL+QAWGSLDALIGRLRAAYEE+GG  + NPF  G IR++LREV+  QAKARG
Sbjct: 84  PPGECNCPLKQAWGSLDALIGRLRAAYEENGGLTEKNPFARGGIRIFLREVRGSQAKARG 143

Query: 164 IPY 166
           + Y
Sbjct: 144 VLY 146


>AT3G04510.1 | Symbols: LSH2 | Protein of unknown function (DUF640)
           | chr3:1215812-1216417 REVERSE LENGTH=201
          Length = 201

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 89/132 (67%), Positives = 108/132 (81%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YE+QKRRDWNTF QYL+N  P + L+ C+  HVLDFLRYLDQFGKTKVH   C FFG P+
Sbjct: 34  YENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVLDFLRYLDQFGKTKVHHQNCAFFGLPN 93

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PPAPC CPLRQAWGSLDALIGRLRAAYEE+GG+P+T+PFG+ ++R++LREV++ QAK+RG
Sbjct: 94  PPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAPETSPFGSRSVRIFLREVRDFQAKSRG 153

Query: 164 IPYXXXXXXXNN 175
           + Y       NN
Sbjct: 154 VSYEKKRKRVNN 165


>AT5G28490.1 | Symbols: LSH1 | Protein of unknown function (DUF640)
           | chr5:10454541-10455113 REVERSE LENGTH=190
          Length = 190

 Score =  171 bits (432), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 90/131 (68%), Positives = 104/131 (79%)

Query: 44  YESQKRRDWNTFGQYLKNRTPQVPLSQCNFNHVLDFLRYLDQFGKTKVHSHGCIFFGQPS 103
           YE+QKRRDWNTF QYL+N  P + L  C+  HVL+FLRYLDQFGKTKVH   C FFG P+
Sbjct: 26  YENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFFGLPN 85

Query: 104 PPAPCACPLRQAWGSLDALIGRLRAAYEEHGGSPDTNPFGAGAIRLYLREVKECQAKARG 163
           PPAPC CPLRQAWGSLDALIGRLRAAYEE+GG P+ NPFG+ A+RL+LREV++ QAKARG
Sbjct: 86  PPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQAKARG 145

Query: 164 IPYXXXXXXXN 174
           + Y       N
Sbjct: 146 VSYEKKRKRVN 156