Miyakogusa Predicted Gene
- Lj4g3v2604080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2604080.1 Non Chatacterized Hit- tr|I3SNP4|I3SNP4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.9,0,seg,NULL;
Bet v1-like,NULL; PHEOPHORBIDE A OXYGENASE,NULL; IRON-SULFUR DOMAIN
CONTAINING PROTEIN,NUL,CUFF.51318.1
(303 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25650.1 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | ... 392 e-109
AT4G25650.2 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | ... 379 e-105
AT3G44880.1 | Symbols: ACD1, LLS1, PAO | Pheophorbide a oxygenas... 124 7e-29
AT2G24820.1 | Symbols: TIC55-II | translocon at the inner envelo... 72 4e-13
>AT4G25650.1 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like |
chr4:13081021-13083153 REVERSE LENGTH=536
Length = 536
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/308 (59%), Positives = 231/308 (75%), Gaps = 7/308 (2%)
Query: 1 MGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKVKADREGGRPLELSIEKLDINGF 60
MGNRDI YGY+VL+ENLMDP+HVPYAHYGLMR +PK K DREGG+PLE++++KLD GF
Sbjct: 227 MGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKEKIDREGGKPLEINVKKLDNKGF 286
Query: 61 SADQGWSKSKFMPPCIFYAYT---PDQ----PASSAETKKPSFQKKFGLIFICVPVSPGN 113
+ Q W S F+ PC++ + T P+Q PA +A K +++ LIFIC+PVSPG
Sbjct: 287 FSKQEWGYSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGR 346
Query: 114 SRLIWCFPRNFGLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIMDVGQANWQKSCFV 173
SRLIW FPRNFG++IDKIVPRW+FH+GQN EE+KI++ G NWQK+CF+
Sbjct: 347 SRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKILERGPENWQKACFI 406
Query: 174 PTKADALVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTPPREQLLDRYWSHTVNCRSCNSA 233
PTK+DA VV FR+W KY+ ++V+WRGK+ +LPPTPPREQL DRYWSH NC SC A
Sbjct: 407 PTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQLFDRYWSHVENCSSCKKA 466
Query: 234 YKSLKVVEVMLQIISVASIGIVATMKQGGMSVVTRNSMVVFAVLSFALSRWLAHFIYKNF 293
+K L +EV+LQI SVA IG++A +KQ MS V R +++V AVLSFA S+WL+HFIYK F
Sbjct: 467 HKYLNALEVILQIASVAMIGVMAVLKQTTMSNVARIAVLVAAVLSFAASKWLSHFIYKTF 526
Query: 294 HYHDYNHA 301
HYHDYNHA
Sbjct: 527 HYHDYNHA 534
>AT4G25650.2 | Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like |
chr4:13081021-13083153 REVERSE LENGTH=559
Length = 559
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/331 (55%), Positives = 231/331 (69%), Gaps = 30/331 (9%)
Query: 1 MGNRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPK----------------------- 37
MGNRDI YGY+VL+ENLMDP+HVPYAHYGLMR +PK
Sbjct: 227 MGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGKYIICISNSCFNPFTNLQILLA 286
Query: 38 VKADREGGRPLELSIEKLDINGFSADQGWSKSKFMPPCIFYAYT---PDQ----PASSAE 90
K DREGG+PLE++++KLD GF + Q W S F+ PC++ + T P+Q PA +A
Sbjct: 287 EKIDREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDPLPEQEHEYPAPAAS 346
Query: 91 TKKPSFQKKFGLIFICVPVSPGNSRLIWCFPRNFGLWIDKIVPRWMFHVGQNXXXXXXXX 150
K +++ LIFIC+PVSPG SRLIW FPRNFG++IDKIVPRW+FH+GQN
Sbjct: 347 DKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLH 406
Query: 151 XXXXEEQKIMDVGQANWQKSCFVPTKADALVVGFRKWLKKYAGSQVEWRGKYSGGVLPPT 210
EE+KI++ G NWQK+CF+PTK+DA VV FR+W KY+ ++V+WRGK+ +LPPT
Sbjct: 407 LLHVEERKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPT 466
Query: 211 PPREQLLDRYWSHTVNCRSCNSAYKSLKVVEVMLQIISVASIGIVATMKQGGMSVVTRNS 270
PPREQL DRYWSH NC SC A+K L +EV+LQI SVA IG++A +KQ MS V R +
Sbjct: 467 PPREQLFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQTTMSNVARIA 526
Query: 271 MVVFAVLSFALSRWLAHFIYKNFHYHDYNHA 301
++V AVLSFA S+WL+HFIYK FHYHDYNHA
Sbjct: 527 VLVAAVLSFAASKWLSHFIYKTFHYHDYNHA 557
>AT3G44880.1 | Symbols: ACD1, LLS1, PAO | Pheophorbide a oxygenase
family protein with Rieske [2Fe-2S] domain |
chr3:16383858-16386204 FORWARD LENGTH=537
Length = 537
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 148/324 (45%), Gaps = 47/324 (14%)
Query: 3 NRDITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKVKADREGGRPLELSIEKLDINGFSA 62
RD+ YGY+ L+EN+ DPSH+ +AH+ KV R+ +PL +E GF
Sbjct: 233 QRDLFYGYDTLMENVSDPSHIDFAHH--------KVTGRRDRAKPLPFKVESSGPWGFQG 284
Query: 63 ---DQGWSKSKFMPPCIFYAYTPDQPASSAETKKPSFQKKFGLIFIC---VPVSPGNSRL 116
D +KF+ PC Y+ ++ + K P + +I+IC +P++PG +R
Sbjct: 285 ANDDSPRITAKFVAPC----YSMNK--IELDAKLPIVGNQKWVIWICSFNIPMAPGKTRS 338
Query: 117 IWCFPRNF--------GLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIM-------- 160
I C RNF W ++VPRW H N +E+ +
Sbjct: 339 IVCSARNFFQFSVPGPAWW--QVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPD 396
Query: 161 -DVGQANWQKSCFVPTKADALVVGFRKWLKKYAGSQVEWRGKY-SGGVLPPTP-PREQLL 217
DV + + K F PT+AD V+ FR WL+++ SQ EW G S LP T + Q+L
Sbjct: 397 YDVNK-QYTKLTFTPTQADRFVLAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTKRQML 455
Query: 218 DRYWSHTVNCRSCNSAYKSLKVVEVMLQIISVASIGIVATMKQGGMSVVTRNSMVVFAVL 277
DR+ HT C SC AY S ++++ L +V + +V ++ A
Sbjct: 456 DRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIRLVLAGLSLISAAS 515
Query: 278 SFALSRWLAHFIYKNFHYHDYNHA 301
++AL H KNF + DY H+
Sbjct: 516 AYAL-----HEQEKNFVFRDYVHS 534
>AT2G24820.1 | Symbols: TIC55-II | translocon at the inner envelope
membrane of chloroplasts 55-II | chr2:10575038-10576829
FORWARD LENGTH=539
Length = 539
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 106/271 (39%), Gaps = 52/271 (19%)
Query: 5 DITYGYEVLIENLMDPSHVPYAHYGLMRTQQPKVKADREGGRPLELSIEKLDINGFSADQ 64
++ Y + +L+ENLMDP+HVP +H + A RE +PL + + GF+
Sbjct: 225 ELPYDHSILLENLMDPAHVPISH------DRTDFTAKREDAQPLVFEVTERSNRGFAGTW 278
Query: 65 GWSKS--------KFMPPCIFYAYTPDQPASSAETKKPSFQKKFGLIFICVPVSPGNSRL 116
G K +F PC+ Q E K + F +F+C P G S L
Sbjct: 279 GREKEGGKGSNLLRFDAPCVL------QNNREFEGKD-GVKNYFSGLFLCRPTGQGKSML 331
Query: 117 IWCFPRNFGLWIDKIVPRWMFHVGQNXXXXXXXXXXXXEEQKIMDVGQANWQKSCFVPTK 176
I F + ++P+W +H QN Q + + + K ++ K
Sbjct: 332 IVRFGVTKRSPLVSVLPQWFWH--QNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLK 389
Query: 177 -ADALVVGFRKWLKKYAGSQVEWRGKYSGGVLPPTPP----------------------- 212
+D V +RKW+ K G + + + LP PP
Sbjct: 390 SSDTWVAEYRKWMDK-VGHGMPYHFGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGI 448
Query: 213 ----REQLLDRYWSHTVNCRSCNSAYKSLKV 239
L +RY+ H ++CRSC++ KS ++
Sbjct: 449 GTMHAPNLANRYFRHIIHCRSCSNVIKSFEL 479