Miyakogusa Predicted Gene

Lj4g3v2603990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603990.1 tr|Q0DMJ5|Q0DMJ5_ORYSJ Os03g0805500 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os03g08055,65.62,3e-17,seg,NULL,TC67535.path2.1
         (203 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55320.1 | Symbols: AAE18 | acyl-activating enzyme 18 | chr1:...   219   8e-58
AT5G23050.1 | Symbols: AAE17 | acyl-activating enzyme 17 | chr5:...    96   2e-20

>AT1G55320.1 | Symbols: AAE18 | acyl-activating enzyme 18 |
           chr1:20633371-20636659 FORWARD LENGTH=727
          Length = 727

 Score =  219 bits (559), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 105/200 (52%), Positives = 135/200 (67%), Gaps = 8/200 (4%)

Query: 4   KSIRELGVKDFVNAGLSVAEANQLDLVLKDVLSLTITNNPAEIWRHLITRRALKPSYPHP 63
           KSI EL   D+V AGL++ +A + D ++ DV++  I  +P + W+ L+    LKP +PHP
Sbjct: 3   KSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHPHP 62

Query: 64  LHQXXXXXXXXXXXXXXXXXNTASPPPYWFPSLEQSRSTNLGRLMETHASKLLGPSYKDP 123
           LHQ                 +   PP YWFPSL QS+STNLG+LME H  +LLGPSYK+P
Sbjct: 63  LHQLLYYSVYSNWDS-----SVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNP 117

Query: 124 ISSFHLFQKFSVQHPQVYWSLVLKELSLSFVEPPKCILDTSDPSKHGGTWFPGSVLNIAE 183
           + SF LF++FSV+HP+VYWS V+ ELSL F  PP+CIL+ S P    GTW P +VLNIAE
Sbjct: 118 LESFELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILNKSKPE---GTWLPDAVLNIAE 174

Query: 184 CCLQPSGHPNKQDDSVAIVW 203
           CCL PS HP K+DDSVA+VW
Sbjct: 175 CCLMPSSHPKKEDDSVAVVW 194


>AT5G23050.1 | Symbols: AAE17 | acyl-activating enzyme 17 |
           chr5:7731513-7735399 REVERSE LENGTH=721
          Length = 721

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 15/204 (7%)

Query: 1   MAKKSIRELGVKDFVNAGLSVAEANQLDLVLKDVLSLTITNNPAEIWRHLITRRALKPSY 60
           MA KS+  +   D    G+S   + +L   L+D++  + T  P E W   I+RR L P+ 
Sbjct: 1   MAYKSLNSITKSDIEALGISGDVSEKLLRDLEDIIHGSST--PPETWIQ-ISRRILHPNL 57

Query: 61  PHPLHQXXXXXXXXXXXXXXXXXNTASPPPYWFPSLEQSRSTNLGRLMETHASKLLGPSY 120
           P   HQ                 +     P W P  + +  TN+G+L+E    + LG +Y
Sbjct: 58  PFSFHQMMYYGCYK---------DFGPDLPAWIPDPKVASLTNVGKLLEKRGKEFLGGNY 108

Query: 121 KDPISSFHLFQKFSVQHPQVYWSLVLKELSLSFVEPPKCILDTSDPSKH-GGTWFPGSVL 179
           K+P+SSF  FQ+FSV +P+VYW  VL EL++ F  PPKCIL+      + GG W PG+ L
Sbjct: 109 KNPVSSFSSFQEFSVSNPEVYWKTVLDELNILFSVPPKCILEKDTSGDNPGGKWLPGAYL 168

Query: 180 NIAECCLQPSGHPNKQDDSVAIVW 203
           N A  CL  +G   + DD + I W
Sbjct: 169 NPARNCLT-NGFKRRLDD-IVIRW 190