Miyakogusa Predicted Gene

Lj4g3v2603980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603980.1 tr|Q94KY7|Q94KY7_BRANA Acetyl-CoA synthetase
(Fragment) OS=Brassica napus GN=MYJ24-3-BN-2 PE=4 SV=1,56.94,1e-17,no
description,NULL; Acetyl-CoA synthetase-like,NULL;
AMP-binding,AMP-dependent synthetase/ligase,CUFF.51235.1
         (228 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55320.2 | Symbols: AAE18 | acyl-activating enzyme 18 | chr1:...   385   e-108
AT1G55320.1 | Symbols: AAE18 | acyl-activating enzyme 18 | chr1:...   384   e-107
AT5G23050.1 | Symbols: AAE17 | acyl-activating enzyme 17 | chr5:...   261   4e-70

>AT1G55320.2 | Symbols: AAE18 | acyl-activating enzyme 18 |
           chr1:20634194-20636659 FORWARD LENGTH=511
          Length = 511

 Score =  385 bits (990), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 175/228 (76%), Positives = 202/228 (88%)

Query: 1   MRSAADGWAFIDLQPGDVYCWPTNLGWVMGPTIIYSCFLSGATLALYHGSPLGHGFGKFV 60
           +RSA DGWA +D+Q G  YCWPTNLGWVMGPT+++SCFL+GATLALY GSPLG GFGKFV
Sbjct: 164 IRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCFLTGATLALYSGSPLGRGFGKFV 223

Query: 61  QDAGVTILGTVPSIVKAWKSTQCMEGLDWTKIKTFCSTGETSNVDDDLWLSSKSYYKPII 120
           QDAGVT+LGTVPS+VK WK T CMEGL+WTKIK F +TGE SNVDD LWLSSK+ YKP+I
Sbjct: 224 QDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATTGEASNVDDVLWLSSKADYKPVI 283

Query: 121 ECCGGTELASSYIMGSPLQHQAFGAFSTASMTTGLVILDENGIPYPEDVPCVGEVGLFPV 180
           ECCGGTELASSYI+GSPLQ QAFGAFST SMTT ++I DENG+PYP+D PC GEVGLFP 
Sbjct: 284 ECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIFDENGVPYPDDQPCTGEVGLFPQ 343

Query: 181 YMGSTDRLLNADHEEVYFKGMPIYKGKVLRRHGDIIKRTVGGHFIVQG 228
           ++G+TDRLLNA+H+EVYFKGMP+YK   LRRHGDI+KRTVGG++ VQG
Sbjct: 344 HLGATDRLLNANHDEVYFKGMPMYKETRLRRHGDIVKRTVGGYYNVQG 391


>AT1G55320.1 | Symbols: AAE18 | acyl-activating enzyme 18 |
           chr1:20633371-20636659 FORWARD LENGTH=727
          Length = 727

 Score =  384 bits (985), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 175/228 (76%), Positives = 202/228 (88%)

Query: 1   MRSAADGWAFIDLQPGDVYCWPTNLGWVMGPTIIYSCFLSGATLALYHGSPLGHGFGKFV 60
           +RSA DGWA +D+Q G  YCWPTNLGWVMGPT+++SCFL+GATLALY GSPLG GFGKFV
Sbjct: 380 IRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCFLTGATLALYSGSPLGRGFGKFV 439

Query: 61  QDAGVTILGTVPSIVKAWKSTQCMEGLDWTKIKTFCSTGETSNVDDDLWLSSKSYYKPII 120
           QDAGVT+LGTVPS+VK WK T CMEGL+WTKIK F +TGE SNVDD LWLSSK+ YKP+I
Sbjct: 440 QDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATTGEASNVDDVLWLSSKADYKPVI 499

Query: 121 ECCGGTELASSYIMGSPLQHQAFGAFSTASMTTGLVILDENGIPYPEDVPCVGEVGLFPV 180
           ECCGGTELASSYI+GSPLQ QAFGAFST SMTT ++I DENG+PYP+D PC GEVGLFP 
Sbjct: 500 ECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIFDENGVPYPDDQPCTGEVGLFPQ 559

Query: 181 YMGSTDRLLNADHEEVYFKGMPIYKGKVLRRHGDIIKRTVGGHFIVQG 228
           ++G+TDRLLNA+H+EVYFKGMP+YK   LRRHGDI+KRTVGG++ VQG
Sbjct: 560 HLGATDRLLNANHDEVYFKGMPMYKETRLRRHGDIVKRTVGGYYNVQG 607


>AT5G23050.1 | Symbols: AAE17 | acyl-activating enzyme 17 |
           chr5:7731513-7735399 REVERSE LENGTH=721
          Length = 721

 Score =  261 bits (666), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 117/228 (51%), Positives = 164/228 (71%)

Query: 1   MRSAADGWAFIDLQPGDVYCWPTNLGWVMGPTIIYSCFLSGATLALYHGSPLGHGFGKFV 60
           ++SAAD W  +D+Q GDV  WPTNLGW+MGP ++Y+  ++GA + LY+GSPLG  F KFV
Sbjct: 375 LKSAADAWCHLDVQRGDVVAWPTNLGWMMGPWLVYASLINGACMGLYNGSPLGPTFAKFV 434

Query: 61  QDAGVTILGTVPSIVKAWKSTQCMEGLDWTKIKTFCSTGETSNVDDDLWLSSKSYYKPII 120
           QDA V++LG +PSIV+ W+++    G DW++I+ F STGE SN+D+ LWL  +++YKP+I
Sbjct: 435 QDAEVSVLGVIPSIVRTWQNSNSTSGYDWSRIRCFGSTGEASNIDEYLWLMGRAHYKPVI 494

Query: 121 ECCGGTELASSYIMGSPLQHQAFGAFSTASMTTGLVILDENGIPYPEDVPCVGEVGLFPV 180
           E CGGTE+  S+I GS LQ Q+  AFSTA+M   L ILDE+  P P     VGE+ L P 
Sbjct: 495 EYCGGTEIGGSFISGSLLQPQSLAAFSTAAMGCKLFILDEDSNPIPPYAAGVGELALCPH 554

Query: 181 YMGSTDRLLNADHEEVYFKGMPIYKGKVLRRHGDIIKRTVGGHFIVQG 228
             G++  LLN +H +VYF+GMP ++G++LRRHGD+ +RT  G++   G
Sbjct: 555 MFGASSTLLNGNHFKVYFQGMPTFQGQILRRHGDLFERTSKGYYRAHG 602