Miyakogusa Predicted Gene

Lj4g3v2603920.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603920.2 tr|A9RER0|A9RER0_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_158713,37.32,2e-17,seg,NULL,CUFF.51225.2
         (227 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55280.1 | Symbols:  | Lipase/lipooxygenase, PLAT/LH2 family ...   140   9e-34

>AT1G55280.1 | Symbols:  | Lipase/lipooxygenase, PLAT/LH2 family
           protein | chr1:20623099-20624533 REVERSE LENGTH=390
          Length = 390

 Score =  140 bits (352), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/210 (42%), Positives = 121/210 (57%), Gaps = 16/210 (7%)

Query: 17  ELRYTGFQYDFQIEDVLLGEGSDMSMLELRPTLVTELEGTDPISLFNKGVYDSSTLLLS- 75
           E +   ++YDF+++++LLGE SD+SM+ELRP+ +TEL  +D IS        SS L L  
Sbjct: 190 EAKTFCYRYDFEVDELLLGESSDLSMVELRPSRITELADSDQIS-------SSSALNLDR 242

Query: 76  TGISNEESMREYASLKFSLLFYDAVLTLIGTSIASLSAGENXXXXXXXXXXXXXXXXXXX 135
           T +SNEESM EYA+LK SLL YDAVL L+G+ + S S GEN                   
Sbjct: 243 TMVSNEESMEEYANLKLSLLLYDAVLILLGSLVFSFSLGENSAIAFFFGGTMGFLYLLLL 302

Query: 136 QRSVDEL--PASELITSNKGGSNALFRGLKGPIXXXXXXXXXXXXXXRYSEGGPV---MF 190
           QRSVDEL  P S   +S++  +  L  GLK P+              R   GG +     
Sbjct: 303 QRSVDELQVPGS---SSSENSNQILSGGLKIPVLSLALAIGLTVLAMRGHIGGEMTAFAV 359

Query: 191 TPKDLIVGMMGFLACKVSVVLAAFKPITPG 220
           TPK+++VG +GFL CKV+V+LAAFKP+  G
Sbjct: 360 TPKEIVVGTLGFLVCKVAVILAAFKPLKDG 389