Miyakogusa Predicted Gene
- Lj4g3v2603880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2603880.1 Non Chatacterized Hit- tr|J3LRS0|J3LRS0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G3,47.66,4e-19,At5g01610-like,Protein of unknown function
DUF538; no description,Protein of unknown function DUF538,CUFF.51222.1
(158 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55265.1 | Symbols: | Protein of unknown function, DUF538 | ... 134 3e-32
AT5G19860.1 | Symbols: | Protein of unknown function, DUF538 | ... 89 1e-18
AT5G54530.1 | Symbols: | Protein of unknown function, DUF538 | ... 79 2e-15
AT1G61667.1 | Symbols: | Protein of unknown function, DUF538 | ... 75 2e-14
AT1G02813.1 | Symbols: | Protein of unknown function, DUF538 | ... 74 5e-14
AT5G16380.1 | Symbols: | Protein of unknown function, DUF538 | ... 70 4e-13
AT4G02370.1 | Symbols: | Protein of unknown function, DUF538 | ... 65 2e-11
AT3G07470.1 | Symbols: | Protein of unknown function, DUF538 | ... 63 6e-11
AT1G02816.1 | Symbols: | Protein of unknown function, DUF538 | ... 63 8e-11
AT2G03350.1 | Symbols: | Protein of unknown function, DUF538 | ... 61 3e-10
AT5G19590.1 | Symbols: | Protein of unknown function, DUF538 | ... 60 9e-10
AT3G07460.1 | Symbols: | Protein of unknown function, DUF538 | ... 59 1e-09
AT3G07460.2 | Symbols: | Protein of unknown function, DUF538 | ... 58 2e-09
AT5G37070.1 | Symbols: | Protein of unknown function, DUF538 | ... 55 2e-08
AT4G02360.1 | Symbols: | Protein of unknown function, DUF538 | ... 54 4e-08
AT5G01610.1 | Symbols: | Protein of unknown function, DUF538 | ... 54 5e-08
AT3G08890.2 | Symbols: | Protein of unknown function, DUF538 | ... 52 2e-07
AT3G08890.1 | Symbols: | Protein of unknown function, DUF538 | ... 52 2e-07
>AT1G55265.1 | Symbols: | Protein of unknown function, DUF538 |
chr1:20617326-20617853 FORWARD LENGTH=175
Length = 175
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
Query: 23 TSTDIHDLLPEYGFPKGLIPNNAISYTISTDGFFTIQLDSPCYVHFSDQYLVYFHTRLTG 82
+ DIHDLLP YGFPKGL+PNN SYTIS DG FT+ L S CYV FSDQ LV++ + G
Sbjct: 50 AADDIHDLLPRYGFPKGLLPNNVKSYTISDDGDFTVDLISSCYVKFSDQ-LVFYGKNIAG 108
Query: 83 KLSYGSVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAGALSQKLPAEEFVNVPGCS 141
KLSYGSV V GIQA+ FLW +T ++ S + F G +S+ LPA F NVP CS
Sbjct: 109 KLSYGSVKDVRGIQAKEAFLWLPITAMESDPSSATVVFSVGFVSKTLPASMFENVPSCS 167
>AT5G19860.1 | Symbols: | Protein of unknown function, DUF538 |
chr5:6714533-6715837 REVERSE LENGTH=181
Length = 181
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 27 IHDLLPEYGFPKGLIPNNAISYTISTDGFFTIQLDSPCYVHFSDQYLVYFHTRLTGKLSY 86
+++LLP+YG P GL+P+ +T+S DG F + L + C + F YLV++ ++G++ Y
Sbjct: 36 VYELLPKYGLPSGLLPDTVTDFTLSDDGRFVVHLPNSCEIEF--DYLVHYDKTISGRIGY 93
Query: 87 GSVTRVSGIQAQILFLWPSVTGIKVH-KDSGMLEFFAGALSQKLPAEEFVNVPGCSPKAC 145
GS+T + GIQ + F+W V IKV S + F G +++KL ++F + C
Sbjct: 94 GSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIYFKVGFINKKLDIDQFKTIHSCHDNGV 153
Query: 146 QG 147
G
Sbjct: 154 SG 155
>AT5G54530.1 | Symbols: | Protein of unknown function, DUF538 |
chr5:22152781-22154201 FORWARD LENGTH=161
Length = 161
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 27 IHDLLPEYGFPKGLIPNNAISYTISTDGFFTIQLDSPCYVHFSDQYLVYFHTRLTGKLSY 86
+HD+L G P GL+P SY + DG + L +PCY F V+F + G LSY
Sbjct: 29 VHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETN--VHFEAVVRGNLSY 86
Query: 87 GSVTRVSGIQAQILFLWPSVTGIKVHK-DSGMLEFFAGALSQKLPAEEFVNVPGCSP 142
GS+ V G+ + LFLW V I V +SG++ F G ++L F + P C P
Sbjct: 87 GSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFEDPPKCKP 143
>AT1G61667.1 | Symbols: | Protein of unknown function, DUF538 |
chr1:22767674-22768269 FORWARD LENGTH=156
Length = 156
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 19 VISSTSTDIHDLLPEYGFPKGLIPNNAISYTISTD-GFFTIQLDSPCYVHFSDQYLVYFH 77
+ S+ + I +LL G P GL P+N SY++ G +QL +PC+ F ++ VYF
Sbjct: 14 ITPSSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFARFENR--VYFD 71
Query: 78 TRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVHK-DSGMLEFFAGALSQKLPAEEFVN 136
+ LSYG + + G+ + LFLW V GI V+ SG++ F G +++ F +
Sbjct: 72 RVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFED 131
Query: 137 VPGCSP 142
P C P
Sbjct: 132 PPVCYP 137
>AT1G02813.1 | Symbols: | Protein of unknown function, DUF538 |
chr1:620773-621222 FORWARD LENGTH=149
Length = 149
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 1 MSPLILNLLILCSTSLFHVISSTSTDIHDLLPEYGFPKGLIPNNAISYTISTD-GFFTIQ 59
MS I+ LL+L STS+ V ++ +L Y P+G++P Y ++ G F ++
Sbjct: 1 MSIFIIFLLLL-STSV-SVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVR 58
Query: 60 LDSPCYVHFS-DQYLVYFHTRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVHKDSGML 118
++ C FS D Y V + ++G ++ G V R+ G+ ++LF W +++ +V +D +
Sbjct: 59 FNTTC--QFSIDSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINIS--EVSRDGDDV 114
Query: 119 EFFAGALSQKLPAEEFVNVPGC 140
EFF GA S++ ++ FV+ P C
Sbjct: 115 EFFVGAASEEFSSKYFVDSPKC 136
>AT5G16380.1 | Symbols: | Protein of unknown function, DUF538 |
chr5:5359730-5360613 REVERSE LENGTH=195
Length = 195
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 4 LILNLLILCSTSLFHVISS-TSTDIHDLLPEYGFPKGLIPNNAISYTISTD-GFFTIQLD 61
L +++L S+ LF +SS +D L E P G++P +++I G FT+ L
Sbjct: 7 LFFLIIVLFSSILFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALP 66
Query: 62 SPCYVHFSDQYLVYFHTRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVH-KDSGMLEF 120
PC F +Q+ +F ++G LS G + +SG+ + LFLW +V GI V + SG++ F
Sbjct: 67 VPCDAKFENQF--HFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHF 124
Query: 121 FAGALSQKLPAEEFVNVPGCSPKACQGGSTATNLVD 156
G ++L F SP+ C + VD
Sbjct: 125 DVGVADKQLSLSLFE-----SPRDCTAAESQPRAVD 155
>AT4G02370.1 | Symbols: | Protein of unknown function, DUF538 |
chr4:1042458-1042961 FORWARD LENGTH=167
Length = 167
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 3 PLILNLLILCSTSLFHVISSTSTDI---HDLLPEYGFPKGLIPNNAISYTI-STDGFFTI 58
P+++ + S+ V+++ +D + LL Y FP G++P ++Y + +T G F
Sbjct: 5 PILIASCLFLSSLTAAVVTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHA 64
Query: 59 QLDSPCYVHFSDQYLVYFHTRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVHKDSGML 118
+ C + Y + + + ++G +S + +++G++ ++LFLW ++ ++V ++ +
Sbjct: 65 YFNDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNI--VEVIRNGDEM 122
Query: 119 EFFAGALSQKLPAEEFVNVPGC 140
EF G S +EF+ P C
Sbjct: 123 EFSVGITSANFAIQEFLESPQC 144
>AT3G07470.1 | Symbols: | Protein of unknown function, DUF538 |
chr3:2387291-2388343 REVERSE LENGTH=169
Length = 169
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 5/139 (3%)
Query: 6 LNLLILCSTSLFHVISSTSTDIHDLLPEYGFPKGLIPNNAISYTISTD-GFFTIQLDSPC 64
L L+++ S+ IS T T I+++L G P G+ P +T + G F++ L+ C
Sbjct: 11 LCLVLVAGISISTAISETET-IYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQAC 69
Query: 65 YVHFSDQYLVYFHTRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVH-KDSGMLEFFAG 123
+ + +++ +TG + ++ +SGI AQ LFLW V GI+V SG++ F G
Sbjct: 70 EAKYETE--IHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVG 127
Query: 124 ALSQKLPAEEFVNVPGCSP 142
+ ++ F C P
Sbjct: 128 VVRKQYSLSLFETPRDCVP 146
>AT1G02816.1 | Symbols: | Protein of unknown function, DUF538 |
chr1:621637-622137 FORWARD LENGTH=166
Length = 166
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 28 HDLLPEYGFPKGLIPNNAISYTI-STDGFFTIQLDSPCYVHFSDQYLVYFHTRLTGKLSY 86
+ LL Y FP G++P +SY + + G F + C Y + + + ++G +S
Sbjct: 33 YTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKSTISGYISE 92
Query: 87 GSVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAGALSQKLPAEEFVNVPGC 140
+T+++G++ ++LFLW ++ ++V ++ LEF G S +EF P C
Sbjct: 93 NKITKLTGVKVKVLFLWLNI--VEVIRNGDELEFSVGITSANFEIDEFYESPQC 144
>AT2G03350.1 | Symbols: | Protein of unknown function, DUF538 |
chr2:1019733-1021071 REVERSE LENGTH=179
Length = 179
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 29 DLLPEYGFPKGLIPNNAISYTI-STDGFFTIQLDSPCYVHFSDQYLVYFHTRLTGKLSYG 87
DLL EY P GL P N I Y T T+ SPC V F D + + TR+ G L G
Sbjct: 61 DLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRG 120
Query: 88 SVTRVSGIQAQILFLWPSVTGIKVH-KDSGMLEFFAG 123
+ V G++ ++L +W VT I V S L F AG
Sbjct: 121 KLMGVEGMKTKVL-VWVKVTTISVESSKSDKLWFTAG 156
>AT5G19590.1 | Symbols: | Protein of unknown function, DUF538 |
chr5:6611614-6612069 REVERSE LENGTH=151
Length = 151
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
Query: 25 TDIHDLLPEYGFPKGLIPNNAISYTIS-TDGFFTIQLDSPCYVHFS-DQYLVYFHTRLTG 82
T H L +GFP GL+P + Y ++ T G F++ L+ C + D Y+ + ++TG
Sbjct: 29 TRAHAELTNHGFPIGLLPLSVKDYFLNQTSGDFSLFLNGACKITLPPDNYIATYSNKVTG 88
Query: 83 KLSYGSVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAGALSQKLPAEEFVNVPGCSP 142
++S G + + GI+ + F S+TGI+ D+ L F ++ K P++ F C
Sbjct: 89 RISQGKIAELQGIRVRAFFKSWSITGIRSSGDN--LVFEVAGITAKYPSKNFDESLDCEG 146
Query: 143 K 143
K
Sbjct: 147 K 147
>AT3G07460.1 | Symbols: | Protein of unknown function, DUF538 |
chr3:2384837-2385617 REVERSE LENGTH=177
Length = 177
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 5 ILNLLILC-----STSLFHVISSTSTDIHDLLPEYGFPKGLIPNNAISYTISTD-GFFTI 58
I+ + +LC S+ VI+ + I ++L G P GL P +T++ + G F++
Sbjct: 4 IVQITLLCFVLAAGISISAVIAENES-IDEILLANGLPLGLFPKGVKGFTVNGETGRFSV 62
Query: 59 QLDSPCYVHFSDQYLVYFHTRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVH-KDSGM 117
L+ C + + +++ ++G + Y + +SGI AQ LFLW V GI+V SG+
Sbjct: 63 YLNQSCQAKYETE--LHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGL 120
Query: 118 LEFFAGALSQK 128
+ F G L ++
Sbjct: 121 IFFDVGVLRKQ 131
>AT3G07460.2 | Symbols: | Protein of unknown function, DUF538 |
chr3:2384544-2385617 REVERSE LENGTH=271
Length = 271
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 5 ILNLLILC-----STSLFHVISSTSTDIHDLLPEYGFPKGLIPNNAISYTISTD-GFFTI 58
I+ + +LC S+ VI+ + I ++L G P GL P +T++ + G F++
Sbjct: 4 IVQITLLCFVLAAGISISAVIAENES-IDEILLANGLPLGLFPKGVKGFTVNGETGRFSV 62
Query: 59 QLDSPCYVHFSDQYLVYFHTRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVH-KDSGM 117
L+ C + + +++ ++G + Y + +SGI AQ LFLW V GI+V SG+
Sbjct: 63 YLNQSCQAKYETE--LHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGL 120
Query: 118 LEFFAGALSQK 128
+ F G L ++
Sbjct: 121 IFFDVGVLRKQ 131
>AT5G37070.1 | Symbols: | Protein of unknown function, DUF538 |
chr5:14651091-14652147 FORWARD LENGTH=170
Length = 170
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 29 DLLPEYGFPKGLIPNNAISYTISTD-GFFTIQLDSPCYVHFSDQYLVYFHTRLTGKLSYG 87
+LL E+G P G+ P +A +Y + + G T+ + C V + D ++ F T +TG L G
Sbjct: 56 ELLKEFGLPVGIFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKG 115
Query: 88 SVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAG 123
+ V G++ +++ +W VT I DS + F AG
Sbjct: 116 KLAEVEGMKTKVM-IWVKVTCISA--DSSKVYFTAG 148
>AT4G02360.1 | Symbols: | Protein of unknown function, DUF538 |
chr4:1041179-1041643 FORWARD LENGTH=154
Length = 154
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 20 ISSTSTDIHDLLPEYGFPKGLIPNNAISYTIS-TDGFFTIQLDSPCYVHFSDQ-YLVYFH 77
+S +D + Y P G++P + Y ++ G F + + C F+ Q Y + +
Sbjct: 22 VSGQKPTAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTC--EFTIQSYQLKYK 79
Query: 78 TRLTGKLSYGSVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAGALSQKLPAEEFVNV 137
+ ++G +S G V + G+ ++LF W ++ +V D L+F G S PA F
Sbjct: 80 STISGVISPGHVKNLKGVSVKVLFFWVNIA--EVSLDGADLDFSVGIASASFPAANFEES 137
Query: 138 PGC 140
P C
Sbjct: 138 PQC 140
>AT5G01610.1 | Symbols: | Protein of unknown function, DUF538 |
chr5:231075-231994 FORWARD LENGTH=170
Length = 170
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 29 DLLPEYGFPKGLIPNNAISYTISTD-GFFTIQLDSPCYVHFSDQYLVYFHTRLTGKLSYG 87
+LL EY P G+ P +A +Y + T+ + S C V + D ++ F T +TG L G
Sbjct: 56 ELLKEYDLPIGIFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKG 115
Query: 88 SVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAG 123
+T V GI+ +++ +W VT I D+ + F AG
Sbjct: 116 KLTDVEGIKTKVM-IWVKVTSIST--DASKVYFTAG 148
>AT3G08890.2 | Symbols: | Protein of unknown function, DUF538 |
chr3:2706701-2707775 FORWARD LENGTH=170
Length = 170
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 29 DLLPEYGFPKGLIPNNAISYTISTDGF-FTIQLDSPCYVHFSDQYLVYFHTRLTGKLSYG 87
+LL E+G P G+ P +A +Y + T+ + S C V + D ++ F T +TG L G
Sbjct: 56 ELLKEFGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKG 115
Query: 88 SVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAG 123
+ V G++ +++ +W VT I DS + F AG
Sbjct: 116 KLADVEGMKTKVM-IWVKVTSISA--DSSKVHFTAG 148
>AT3G08890.1 | Symbols: | Protein of unknown function, DUF538 |
chr3:2706701-2707775 FORWARD LENGTH=170
Length = 170
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 29 DLLPEYGFPKGLIPNNAISYTISTDGF-FTIQLDSPCYVHFSDQYLVYFHTRLTGKLSYG 87
+LL E+G P G+ P +A +Y + T+ + S C V + D ++ F T +TG L G
Sbjct: 56 ELLKEFGLPVGIFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKG 115
Query: 88 SVTRVSGIQAQILFLWPSVTGIKVHKDSGMLEFFAG 123
+ V G++ +++ +W VT I DS + F AG
Sbjct: 116 KLADVEGMKTKVM-IWVKVTSISA--DSSKVHFTAG 148