Miyakogusa Predicted Gene

Lj4g3v2603600.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603600.1 tr|G7LHB5|G7LHB5_MEDTR Glutamyl-tRNA(Gln)
amidotransferase subunit A OS=Medicago truncatula GN=MTR_8,80.47,0,no
description,Amidase signature domain; Amidase signature (AS)
enzymes,Amidase signature domain; AM,CUFF.51202.1
         (509 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34880.1 | Symbols:  | Amidase family protein | chr4:16615549...   462   e-130
AT5G07360.1 | Symbols:  | Amidase family protein | chr5:2326925-...    98   1e-20
AT5G07360.2 | Symbols:  | Amidase family protein | chr5:2326925-...    96   5e-20
AT3G25660.1 | Symbols:  | Amidase family protein | chr3:9339640-...    95   1e-19
AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase...    65   1e-10
AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidas...    51   2e-06

>AT4G34880.1 | Symbols:  | Amidase family protein |
           chr4:16615549-16617424 FORWARD LENGTH=466
          Length = 466

 Score =  462 bits (1188), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/481 (52%), Positives = 319/481 (66%), Gaps = 59/481 (12%)

Query: 25  FSIKEATVHDLQLAFKRNQLTSKQLVEFYLKQIQIQNPVLKGVLEVNPDAVXXXXXXXXX 84
           FSI+EAT+ D+++AF   +LTSKQLVE YL+ I   NP+L  V+E NPDA+         
Sbjct: 38  FSIQEATIEDIRVAFNEKRLTSKQLVELYLEAISKLNPILHAVIETNPDALIQAEIADRE 97

Query: 85  XXXXXXTGYLLSGLHGIPILVKDNIASKDKLNTTAGSYALLGSVVPRDAGVVARLRKAGA 144
                 T   L  LHG+P+L+KD+I++KDKLNTTAGS+ALLGSVV RDAGVV RLR++GA
Sbjct: 98  RDLKNTTK--LPILHGVPVLLKDSISTKDKLNTTAGSFALLGSVVARDAGVVKRLRESGA 155

Query: 145 IILGKASLSEWSYFRSNGAPSGWSARGGQGKNPYTLGDPCXXXXXXXXXXXXNLVTVSLG 204
           +ILGKASLSEW++FRS   P GWSA                                   
Sbjct: 156 VILGKASLSEWAHFRSFSIPDGWSA----------------------------------- 180

Query: 205 TETDGSILCPSNSNSVVGIKPTVGLTSRSGVVPISPRQDTVGPICRTVSDAALVLETIAG 264
                    PS  NSVVGIKP+VGLTSR+GVVPIS RQD++GPICRTVSDA  +L+ I G
Sbjct: 181 ---------PSQ-NSVVGIKPSVGLTSRAGVVPISLRQDSIGPICRTVSDAVHLLDAIVG 230

Query: 265 IDAFDKETIEASKYIPKGGYTQYLKKDGLRGKRLGIVRSYYDFGDDTFLDETFKLHLKTL 324
            D  D+ T  AS++IP+GGY Q+L   GL+GKRLGIV  +      + LD     H+KTL
Sbjct: 231 YDPLDEATKTASEFIPEGGYKQFLTTSGLKGKRLGIVMKH-----SSLLDH----HIKTL 281

Query: 325 RQRGAVLVDHLKXXXXXXXX--XXXXXXXALDFEFKLSLNAYLKDLVASPVRSLADVIAY 382
           R+ GA+++++L                  AL  EFK+SLNAYLK+LV SPVRSLADVIAY
Sbjct: 282 RREGAIVINNLTIPNIEVIVGGTDSGEEIALLAEFKMSLNAYLKELVKSPVRSLADVIAY 341

Query: 383 NKKHPKLEKLDEYGQDVMLQAEKTNGIGKVLEQALLNMTRLSQNGFEKLMKRNKLDAVVI 442
           N++  + EK+ E+GQ+V L AE T+G+G+  + AL  M  LS+NG EKL++ NKLDA+V 
Sbjct: 342 NEEFAEQEKVKEWGQEVFLTAEATSGMGEKEKTALQKMKELSRNGIEKLIEENKLDAIVT 401

Query: 443 PSYSFSNILAIGGYPGVIVPAGYEK-GVPFGICFGGLKGSEPKLIEIAYSFEQATMIRKP 501
                S++LAIGGYPG+ VPAGY+  GVP+GI FGGL+ SEPKLIEIA++FEQAT+IRKP
Sbjct: 402 LGSDLSSVLAIGGYPGINVPAGYDSGGVPYGISFGGLRFSEPKLIEIAFAFEQATLIRKP 461

Query: 502 P 502
           P
Sbjct: 462 P 462


>AT5G07360.1 | Symbols:  | Amidase family protein |
           chr5:2326925-2330011 REVERSE LENGTH=659
          Length = 659

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 13/245 (5%)

Query: 31  TVHDLQLAFKRNQLTSKQLVEFYLKQIQIQNPVLKGVLEVNPDAVXXXXXXXXXXXXXXX 90
           +V +L    K  Q+TSK+LV  YLKQ++  N VL+ V+    +                 
Sbjct: 204 SVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDLLSQ-- 261

Query: 91  TGYLLSGLHGIPILVKDNIASKDKLNTTAGSYALLGSVVPRDAGVVARLRKAGAIILGKA 150
            G  L  LHGIP  +KD I +     TT GS +     +  +A V  RL+ +GA+++ K 
Sbjct: 262 -GTYLGPLHGIPYGLKD-IVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAKL 319

Query: 151 SLSEWSYFRSNGAPSGWSARGGQGKNPYTLGD-PCXXXXXXXXXXXXNLVTVSLGTETDG 209
                +Y         W   GG+ +NP+ + +                +V  ++G+ET G
Sbjct: 320 VTGSMAY------DDIWF--GGRTRNPWNIEEFSTGSSAGPAASTSAGMVPFAIGSETAG 371

Query: 210 SILCPSNSNSVVGIKPTVGLTSRSGVVPISPRQDTVGPICRTVSDAALVLETIAGIDAFD 269
           S+  P+    +  ++PT G   R+GV+ IS   D +GP CRT +D A++L+ I G D  D
Sbjct: 372 SMTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPDD 431

Query: 270 KETIE 274
             + E
Sbjct: 432 LSSRE 436


>AT5G07360.2 | Symbols:  | Amidase family protein |
           chr5:2326925-2330011 REVERSE LENGTH=652
          Length = 652

 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 18/244 (7%)

Query: 31  TVHDLQLAFKRNQLTSKQLVEFYLKQIQIQNPVLKGVLEVNPDAVXXXXXXXXXXXXXXX 90
           +V +L    K  Q+TSK+LV  YLKQ++  N VL+ V+    +                 
Sbjct: 204 SVLELGELIKTRQITSKELVRIYLKQLKRYNHVLEAVVTYTEELAYKQAKEADDLLSQ-- 261

Query: 91  TGYLLSGLHGIPILVKDNIASKDKLNTTAGSYALLGSVVPRDAGVVARLRKAGAIILGKA 150
            G  L  LHGIP  +KD I +     TT GS +     +  +A V  RL+ +GA+++ K 
Sbjct: 262 -GTYLGPLHGIPYGLKD-IVAVPGYKTTWGSTSFKDQFLDIEAWVYKRLKASGAVLVAKL 319

Query: 151 SLSEWSYFRSNGAPSGWSARGGQGKNPYTLGDPCXXXXXXXXXXXXNLVTVSLGTETDGS 210
                +Y         W   GG+ +NP+ + +                 + S G+ET GS
Sbjct: 320 VTGSMAY------DDIWF--GGRTRNPWNIEE------FSTGSSAGPAASTSAGSETAGS 365

Query: 211 ILCPSNSNSVVGIKPTVGLTSRSGVVPISPRQDTVGPICRTVSDAALVLETIAGIDAFDK 270
           +  P+    +  ++PT G   R+GV+ IS   D +GP CRT +D A++L+ I G D  D 
Sbjct: 366 MTYPAARCGITALRPTFGSVGRTGVMSISESLDKLGPFCRTAADCAVILDAIKGKDPDDL 425

Query: 271 ETIE 274
            + E
Sbjct: 426 SSRE 429


>AT3G25660.1 | Symbols:  | Amidase family protein |
           chr3:9339640-9342044 REVERSE LENGTH=537
          Length = 537

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 211/512 (41%), Gaps = 107/512 (20%)

Query: 43  QLTSKQLVEFYLKQIQIQNPVLKGVLEVNPDAVXXXXXXXXXXXXXXXTGYLLSGLHGIP 102
           + T+ ++ + YL +I++  P LK  L V+ + +                G  L  L G+ 
Sbjct: 57  ETTAVEIAKSYLSRIRLTEPQLKCFLHVSENVLKDAQEIDQRIAK----GEELGPLAGVL 112

Query: 103 ILVKDNIASKDKLNTTAGSYALLGSVVPRDAGVVARLRKAGAIILGKASLSEWSYFRSNG 162
           I VKDNI ++  + +TA S  L     P DA  V ++++ G I++GK ++ E+      G
Sbjct: 113 IGVKDNICTQG-MPSTAASRILEHYRPPFDATAVKKIKELGGIVVGKTNMDEF------G 165

Query: 163 APSGWSARGGQ-GKNPYTLGD-PCXXXXXXXXXXXXNLVTVSLGTETDGSILCPSNSNSV 220
             S   A   Q   NP+ L   P                 VSLG++T GS+  P++   V
Sbjct: 166 MGSTTEASAFQVTANPWDLSRVPGGSSGGSAAAVAARQCMVSLGSDTGGSVRQPASFCGV 225

Query: 221 VGIKPTVGLTSRSGVVPISPRQDTVGPICRTVSDAALVLETIAGIDAFDKETIEASKYIP 280
           VG+KPT G  SR G++  +   D +G    TV+DA ++L  I+G D FD  +  + + +P
Sbjct: 226 VGLKPTYGRVSRFGLMAYASSLDVIGCFGSTVADAGMLLHAISGYDRFD--STSSKQDVP 283

Query: 281 KGGYTQYLKKDG-----LRGKRLGIVRSYYDFGDDTFLDETFKLHLKTLRQRGAVLVDHL 335
           +   +Q+L  D      L G ++GI+R   + G D+ +    +     L   G +L +  
Sbjct: 284 E-FQSQFLSVDHFESKPLNGVKVGIIRETLEDGVDSGVRSATQEAASHLEALGCILTE-- 340

Query: 336 KXXXXXXXXXXXXXXXALDFEFKLSLNAYLKDLVASPVRSLADVIAYNKKHPKLEKLD-- 393
                           +L   F L L AY              VIA ++    L + D  
Sbjct: 341 ---------------VSLP-SFSLGLPAYY-------------VIASSESSSNLSRYDGV 371

Query: 394 EYGQDVMLQAEKTNGI----------GKVLEQALLNMTRLSQNGFEKLMKRNKLDAVVI- 442
            YG  VM  AE+ N +          G+V  + L+    LS   ++   KR +    +I 
Sbjct: 372 RYGNQVM--AEELNKLYECSRGEGFGGEVKMRILMGTYALSAGYYDAYYKRAQQVRTLIR 429

Query: 443 ------------------PSYSFS--------------NILAI----GGYPGVIVPAGYE 466
                             PS ++               +I+ +     G P +++P G  
Sbjct: 430 KDFKAALEQNDILISPAAPSAAYKIGEKKDDPLAMYAGDIMTVNVNLAGLPAMVLPCGLV 489

Query: 467 KGVPFGICFG----GLKGSEPKLIEIAYSFEQ 494
           +G P G+  G    G    E KL+++ + FEQ
Sbjct: 490 EGGPSGLPVGLQMIGAAFDEEKLLKVGHIFEQ 521


>AT5G64440.1 | Symbols: AtFAAH, FAAH | fatty acid amide hydrolase |
           chr5:25766229-25770260 FORWARD LENGTH=607
          Length = 607

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 4/185 (2%)

Query: 92  GYLLSGLHGIPILVKDNIASKDKLNTTAGSYALLGSVVPRDAGVVARLRKAGAIILGKAS 151
           G  +S L GI + +KD+I           ++      V +D+ VV++LR  GAI+LGKA+
Sbjct: 191 GNPISVLDGIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKAN 250

Query: 152 LSEWSYFRSNGAPSGWSARGGQGKNPYTLGDPCXXXXXXXXXXXXNLVTVSLGTETDGSI 211
           + E     +    +  + R       YT G                L + +LGT+  GS+
Sbjct: 251 MHELGMGTTGNNSNYGTTRNPHDPKRYTGGS----SSGSAAIVAAGLCSAALGTDGGGSV 306

Query: 212 LCPSNSNSVVGIKPTVGLTSRSGVVPISPRQDTVGPICRTVSDAALVLETIAGIDAFDKE 271
             PS    + G+K T G T  +G +      + +GP+  ++ DA LV   I G  + D+ 
Sbjct: 307 RIPSALCGITGLKTTYGRTDMTGSLCEGGTVEIIGPLASSLEDAFLVYAAILGSSSADRY 366

Query: 272 TIEAS 276
            ++ S
Sbjct: 367 NLKPS 371


>AT1G08980.1 | Symbols: ATAMI1, AMI1, ATTOC64-I, TOC64-I | amidase 1
           | chr1:2884455-2886430 FORWARD LENGTH=425
          Length = 425

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 127 SVVPRDAGVVARLRKAGAIILGKASLSEWSYFRSNGAPSGWSARGGQGKNPYTLGD-PCX 185
           S     A VV+ L +AGA  LG   + E +Y     + +G +A  G  +NP      P  
Sbjct: 58  SAATSTAPVVSSLLEAGATALGITIMDEMAY-----SINGENAHYGTPRNPIAFDRVPGG 112

Query: 186 XXXXXXXXXXXNLVTVSLGTETDGSILCPSNSNSVVGIKPTVGLTSRSGVVPISPRQDTV 245
                       LV  S+GT+T GS+  P++   + G +P+ G  S  G+ P++   DTV
Sbjct: 113 SSSGSAVAVAARLVDFSIGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGLTPMAQSFDTV 172

Query: 246 GPICR 250
           G   R
Sbjct: 173 GWFAR 177