Miyakogusa Predicted Gene

Lj4g3v2593480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2593480.1 Non Chatacterized Hit- tr|F6I752|F6I752_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.03,1e-17,seg,NULL; coiled-coil,NULL,CUFF.51232.1
         (478 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48610.1 | Symbols:  | unknown protein; Has 43043 Blast hits ...    54   3e-07

>AT5G48610.1 | Symbols:  | unknown protein; Has 43043 Blast hits
          to 23768 proteins in 1327 species: Archae - 108;
          Bacteria - 3952; Metazoa - 17076; Fungi - 3614; Plants
          - 1643; Viruses - 204; Other Eukaryotes - 16446
          (source: NCBI BLink). | chr5:19712614-19714861 FORWARD
          LENGTH=354
          Length = 354

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/24 (87%), Positives = 21/24 (87%)

Query: 1  MSRCFPFPPPGYEKKTRTDEVDLL 24
          MSRCFPFPPPGYEKK RTDE D L
Sbjct: 1  MSRCFPFPPPGYEKKIRTDEADPL 24