Miyakogusa Predicted Gene

Lj4g3v2581420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2581420.1 tr|G7KJI2|G7KJI2_MEDTR Heat stress transcription
factor A-5 OS=Medicago truncatula GN=MTR_6g044500
P,54.9,4e-16,seg,NULL,CUFF.51193.1
         (314 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13980.1 | Symbols: AT-HSFA5, HSFA5 | winged-helix DNA-bindin...   238   3e-63

>AT4G13980.1 | Symbols: AT-HSFA5, HSFA5 | winged-helix DNA-binding
           transcription factor family protein |
           chr4:8077519-8079247 REVERSE LENGTH=466
          Length = 466

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 151/319 (47%), Positives = 190/319 (59%), Gaps = 33/319 (10%)

Query: 1   MEKRQKQLLNFFEKALQNPTFVEHLSRKIESMDLSAYNKKRRXXXXXXXXXXXXXESSSV 60
           ME RQK+LLNF E A++NPTFV++  +K+E +D+SAYNKKRR             E S +
Sbjct: 176 MENRQKKLLNFLETAIRNPTFVKNFGKKVEQLDISAYNKKRRLPEVEQSKPPS--EDSHL 233

Query: 61  DNHSNFRMEFG-NVIHHDFSNKLRLELSPAVSDMNLVSHSTQSSNEDGESPQNKLSEGEL 119
           DN S        N+ H +FSNKLRLELSPA SDMN+VSHS QSSNE+G SP+  LS G+ 
Sbjct: 234 DNSSGSSRRESGNIFHQNFSNKLRLELSPADSDMNMVSHSIQSSNEEGASPKGILSGGDP 293

Query: 120 KGVQT-RTALAFAPETLELADTGTSFTFKMDPCLSQRTTTAESSKLHSME---PSSEEGD 175
               T R  L FAPE LELADTGT        C  +R    +++++ +++    SSEE D
Sbjct: 294 NTTLTKREGLPFAPEALELADTGT--------C-PRRLLLNDNTRVETLQQRLTSSEETD 344

Query: 176 SHISCQLNLTLASCPLPANRNSYSARSPQIDCQEIGKIAESRFYASGKESDIGVSSNQNV 235
              SC LNLTLAS PLP    S  A++  +  QE+     +    S  E + G    Q +
Sbjct: 345 GSFSCHLNLTLASAPLPDKTASQIAKT-TLKSQELNF---NSIETSASEKNRG---RQEI 397

Query: 236 ANEVTNLAAPTPSSNQVSPAAPDRVNDVFWEQFLTERPGCSDNEEAISNYRANPYDEQEE 295
           A             +Q + A P RVNDVFWEQFLTERPG SDNEEA S YR NPY+EQEE
Sbjct: 398 A----------VGGSQANAAPPARVNDVFWEQFLTERPGSSDNEEASSTYRGNPYEEQEE 447

Query: 296 GRSVHGISRNIKGMDQLTL 314
            R+   + RN K ++QLTL
Sbjct: 448 KRNGSMMLRNTKNIEQLTL 466