Miyakogusa Predicted Gene

Lj4g3v2577140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2577140.1 Non Chatacterized Hit- tr|E0VHT4|E0VHT4_PEDHC
Putative uncharacterized protein OS=Pediculus humanus
,26.06,0.0000006,seg,NULL; Med18,Mediator complex, subunit Med18,
metazoa/fungi,CUFF.51164.1
         (194 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G22370.1 | Symbols:  | unknown protein; Has 127 Blast hits to...   273   7e-74

>AT2G22370.1 | Symbols:  | unknown protein; Has 127 Blast hits to
           127 proteins in 48 species: Archae - 0; Bacteria - 0;
           Metazoa - 87; Fungi - 0; Plants - 39; Viruses - 0; Other
           Eukaryotes - 1 (source: NCBI BLink). |
           chr2:9501019-9502078 REVERSE LENGTH=219
          Length = 219

 Score =  273 bits (697), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 125/154 (81%), Positives = 142/154 (92%)

Query: 1   MECVVQGIIETQHVEALEILLQGLCGVQRERLRIHEICLKNGPNLGNVASEVRLLCDLEQ 60
           MECVVQGIIETQHVEALEILLQGLCGVQRERLR+HE+CL++GPNLG V+SEVRLLCDL+Q
Sbjct: 3   MECVVQGIIETQHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQ 62

Query: 61  AEPSWTVKHIGGPIRGAGADQISVLVRNMVESKASKNVLRMFYTLGYKLDHELLRVGFSF 120
            EP+WTVKH+GG +RGAGADQISVLVRNM+ESK SKN LRMFY LGYKLDHELL+VGF+F
Sbjct: 63  PEPTWTVKHVGGAMRGAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAF 122

Query: 121 QFYRGAQITVTVSSINKMPKLHATDEAEPVTPGI 154
            F R A I+V+VSS+NKMPK+HA DEA PVTPG+
Sbjct: 123 HFQRTAHISVSVSSVNKMPKVHAIDEAVPVTPGM 156