Miyakogusa Predicted Gene

Lj4g3v2575000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2575000.1 Non Chatacterized Hit- tr|I1K3Q0|I1K3Q0_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,59.76,4e-19,coiled-coil,NULL,CUFF.51157.1
         (82 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G23670.2 | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-assoc...    66   5e-12
AT3G23670.1 | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-assoc...    66   6e-12
AT4G14150.1 | Symbols: PAKRP1, KINESIN-12A | phragmoplast-associ...    60   3e-10

>AT3G23670.2 | Symbols: PAKRP1L, KINESIN-12B |
           phragmoplast-associated kinesin-related protein,
           putative | chr3:8519290-8525055 FORWARD LENGTH=971
          Length = 971

 Score = 66.2 bits (160), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 1   MDKLKKKHAEEISVLNEL-IAKTRLPEEDVQPPCDDSVIPTYDDTKMSHPLNNQFESF-- 57
           +DKLK+K+  EIS +N+   A+ + P E +Q  C+D  +  YD+   S   N   E F  
Sbjct: 887 VDKLKRKYETEISTVNQQHNAEPQNPIESLQASCNDDAMAKYDEPSASDGDNQWREEFQP 946

Query: 58  YYEEDGELEKLAEQSPFSGYDRCNI 82
           +Y++D EL KLAE S FSGYDRCNI
Sbjct: 947 FYKKDEELSKLAEPSWFSGYDRCNI 971


>AT3G23670.1 | Symbols: PAKRP1L, KINESIN-12B | phragmoplast-associated
            kinesin-related protein, putative | chr3:8519290-8525055
            FORWARD LENGTH=1313
          Length = 1313

 Score = 65.9 bits (159), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 3/85 (3%)

Query: 1    MDKLKKKHAEEISVLNEL-IAKTRLPEEDVQPPCDDSVIPTYDDTKMSHPLNNQFESF-- 57
            +DKLK+K+  EIS +N+   A+ + P E +Q  C+D  +  YD+   S   N   E F  
Sbjct: 1229 VDKLKRKYETEISTVNQQHNAEPQNPIESLQASCNDDAMAKYDEPSASDGDNQWREEFQP 1288

Query: 58   YYEEDGELEKLAEQSPFSGYDRCNI 82
            +Y++D EL KLAE S FSGYDRCNI
Sbjct: 1289 FYKKDEELSKLAEPSWFSGYDRCNI 1313


>AT4G14150.1 | Symbols: PAKRP1, KINESIN-12A | phragmoplast-associated
            kinesin-related protein 1 | chr4:8158645-8165008 REVERSE
            LENGTH=1292
          Length = 1292

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 3/82 (3%)

Query: 1    MDKLKKKHAEEISVLNELIAKTRLPEEDVQPPCDDSVIPTYDDTKMSHPLNNQFESFYYE 60
            +DKLKKKH  EI+ LN+L+ ++ +  E     CD +V P+ + +       ++FE  Y +
Sbjct: 1214 IDKLKKKHENEINTLNQLVPQSHIHNE-CSTKCDQAVEPSVNASS-EQQWRDEFEPLYKK 1271

Query: 61   EDGELEKLAEQSPFSGYDRCNI 82
            E  E   LAE S FSGYDRCNI
Sbjct: 1272 ET-EFSNLAEPSWFSGYDRCNI 1292