Miyakogusa Predicted Gene

Lj4g3v2573620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2573620.1 tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein
OS=Oryza sativa subsp. japonica GN=Os09g0507400 PE=2
SV=,46.9,0.000000000000006,seg,NULL,CUFF.51128.1
         (132 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G27290.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   123   4e-29
AT1G27290.1 | Symbols:  | unknown protein; Has 44 Blast hits to ...   123   4e-29

>AT1G27290.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; EXPRESSED IN: 25 plant
           structures; EXPRESSED DURING: 15 growth stages; Has 44
           Blast hits to 44 proteins in 12 species: Archae - 0;
           Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44;
           Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
           | chr1:9481788-9482576 FORWARD LENGTH=142
          Length = 142

 Score =  123 bits (308), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 93/133 (69%), Gaps = 12/133 (9%)

Query: 12  NSRVFCELSALVFNLLRSHPTPVSFPDRAPIVP--VRPSESPLARRSSTA--GQITPAGF 67
            SRVF +LS+LV NLLRS P P+S PD  P  P  +RP  S     SS+     I+P+GF
Sbjct: 10  QSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPSLAHISPSGF 69

Query: 68  AALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIFY------ 121
           A+LLLGISV+LMLCGSVTFF+GF+LMPWV+ L++V YVAG+V+++S++GRSI        
Sbjct: 70  ASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPP 129

Query: 122 --PRKDFPEWKLI 132
               K+  EWKL+
Sbjct: 130 SPSGKEISEWKLL 142


>AT1G27290.1 | Symbols:  | unknown protein; Has 44 Blast hits to 44
           proteins in 12 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:9481788-9482576 FORWARD LENGTH=142
          Length = 142

 Score =  123 bits (308), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 71/133 (53%), Positives = 93/133 (69%), Gaps = 12/133 (9%)

Query: 12  NSRVFCELSALVFNLLRSHPTPVSFPDRAPIVP--VRPSESPLARRSSTA--GQITPAGF 67
            SRVF +LS+LV NLLRS P P+S PD  P  P  +RP  S     SS+     I+P+GF
Sbjct: 10  QSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPSLAHISPSGF 69

Query: 68  AALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIFY------ 121
           A+LLLGISV+LMLCGSVTFF+GF+LMPWV+ L++V YVAG+V+++S++GRSI        
Sbjct: 70  ASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRSILCYVLTPP 129

Query: 122 --PRKDFPEWKLI 132
               K+  EWKL+
Sbjct: 130 SPSGKEISEWKLL 142