Miyakogusa Predicted Gene
- Lj4g3v2573560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2573560.1 Non Chatacterized Hit- tr|I1KS30|I1KS30_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.8,9.99995e-41,no
description,NULL; SENSOR PROTEIN,NULL; TWO COMPONENT SIGNAL
TRANSDUCTION PROTEIN-RELATED,NULL; RE,CUFF.51124.1
(87 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948... 136 3e-33
AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139... 132 3e-32
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 113 2e-26
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 113 2e-26
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 113 2e-26
AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 | c... 61 2e-10
AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | ch... 59 5e-10
AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kina... 49 7e-07
AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kina... 49 7e-07
>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
chr1:9487780-9492027 FORWARD LENGTH=1036
Length = 1036
Score = 136 bits (342), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/91 (71%), Positives = 75/91 (82%), Gaps = 5/91 (5%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVS-----MDGFENVSNWHVPILAMTADVIQATH 55
MDIQMPEMDGFEATRRIR+ME +N+ + + N ++WH+P+LAMTADVIQATH
Sbjct: 940 MDIQMPEMDGFEATRRIRDMEEEMNKRIKNGEALIVENGNKTSWHLPVLAMTADVIQATH 999
Query: 56 EECLRYGMDGYVSKPFEAEQLYREVSRFFPS 86
EECL+ GMDGYVSKPFEAEQLYREVSRFF S
Sbjct: 1000 EECLKCGMDGYVSKPFEAEQLYREVSRFFNS 1030
>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
chr5:13911743-13916337 REVERSE LENGTH=1176
Length = 1176
Score = 132 bits (333), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/89 (69%), Positives = 72/89 (80%), Gaps = 5/89 (5%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNR-----EVSMDGFENVSNWHVPILAMTADVIQATH 55
MD+QMPEMDGFEATRR+RE+E +N+ EVS + F S+WHVPILAMTADVIQATH
Sbjct: 1085 MDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCKFSSWHVPILAMTADVIQATH 1144
Query: 56 EECLRYGMDGYVSKPFEAEQLYREVSRFF 84
EEC++ GMDGYVSKPFE E LY V+RFF
Sbjct: 1145 EECMKCGMDGYVSKPFEEEVLYTAVARFF 1173
>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-368016
REVERSE LENGTH=1080
Length = 1080
Score = 113 bits (283), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVSMDGFENVSNWHVPILAMTADVIQATHEECLR 60
MDIQMP+MDGFEATR+IR ME + +++ WH+PILAMTADVI AT+EECL+
Sbjct: 995 MDIQMPQMDGFEATRQIRMMEKETKEKTNLE-------WHLPILAMTADVIHATYEECLK 1047
Query: 61 YGMDGYVSKPFEAEQLYREVSRFF 84
GMDGYVSKPFE E LY+ V++ F
Sbjct: 1048 SGMDGYVSKPFEEENLYKSVAKSF 1071
>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 113 bits (283), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVSMDGFENVSNWHVPILAMTADVIQATHEECLR 60
MDIQMP+MDGFEATR+IR ME + +++ WH+PILAMTADVI AT+EECL+
Sbjct: 972 MDIQMPQMDGFEATRQIRMMEKETKEKTNLE-------WHLPILAMTADVIHATYEECLK 1024
Query: 61 YGMDGYVSKPFEAEQLYREVSRFF 84
GMDGYVSKPFE E LY+ V++ F
Sbjct: 1025 SGMDGYVSKPFEEENLYKSVAKSF 1048
>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 113 bits (283), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 64/84 (76%), Gaps = 7/84 (8%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVSMDGFENVSNWHVPILAMTADVIQATHEECLR 60
MDIQMP+MDGFEATR+IR ME + +++ WH+PILAMTADVI AT+EECL+
Sbjct: 972 MDIQMPQMDGFEATRQIRMMEKETKEKTNLE-------WHLPILAMTADVIHATYEECLK 1024
Query: 61 YGMDGYVSKPFEAEQLYREVSRFF 84
GMDGYVSKPFE E LY+ V++ F
Sbjct: 1025 SGMDGYVSKPFEEENLYKSVAKSF 1048
>AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 |
chr2:7743133-7748013 REVERSE LENGTH=1207
Length = 1207
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 13/72 (18%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVSMDGFENVSNWHVPILAMTADVIQATHEECLR 60
MD QMP+MDG+EAT+ IR E + E+ H+PI+A+TA + + +CL
Sbjct: 1126 MDCQMPKMDGYEATKAIRRAE--IGTEL-----------HIPIVALTAHAMSSDEAKCLE 1172
Query: 61 YGMDGYVSKPFE 72
GMD Y++KP +
Sbjct: 1173 VGMDAYLTKPID 1184
>AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 |
chr5:3386835-3390541 FORWARD LENGTH=922
Length = 922
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 11/95 (11%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVSMDGFENVSNWH-----------VPILAMTAD 49
MD+ MP +DG +ATR IR E N +++ ++S +PI+AMTA+
Sbjct: 827 MDVCMPVLDGLKATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPTNRLPIIAMTAN 886
Query: 50 VIQATHEECLRYGMDGYVSKPFEAEQLYREVSRFF 84
+ + EEC GMD ++SKP ++L + ++
Sbjct: 887 TLAESSEECYANGMDSFISKPVTLQKLRECLQQYL 921
>AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 17/88 (19%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVSMDGFENVSNWHVP-ILAMTADVIQATHEECL 59
+D+QMPEMDGFE +IR+ H P I+A+TA E CL
Sbjct: 693 LDLQMPEMDGFEVAMKIRKF----------------CGHHWPLIIALTASTEDHVRERCL 736
Query: 60 RYGMDGYVSKPFEAEQLYREVSRFFPSS 87
+ GM+G + KP + E+ R ++
Sbjct: 737 QMGMNGMIQKPVLLHVMASELRRALQTA 764
>AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 17/88 (19%)
Query: 1 MDIQMPEMDGFEATRRIREMEHNVNREVSMDGFENVSNWHVP-ILAMTADVIQATHEECL 59
+D+QMPEMDGFE +IR+ H P I+A+TA E CL
Sbjct: 693 LDLQMPEMDGFEVAMKIRKF----------------CGHHWPLIIALTASTEDHVRERCL 736
Query: 60 RYGMDGYVSKPFEAEQLYREVSRFFPSS 87
+ GM+G + KP + E+ R ++
Sbjct: 737 QMGMNGMIQKPVLLHVMASELRRALQTA 764