Miyakogusa Predicted Gene
- Lj4g3v2563540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2563540.1 Non Chatacterized Hit- tr|I1LN68|I1LN68_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.19,0,F-box,F-box
domain, cyclin-like; A Receptor for Ubiquitination Targets,F-box
domain, cyclin-like; no,CUFF.51122.1
(453 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27340.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 577 e-165
AT1G30950.1 | Symbols: UFO | F-box family protein | chr1:1103618... 128 8e-30
AT5G15710.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 126 3e-29
AT4G33160.1 | Symbols: | F-box family protein | chr4:15994160-1... 112 6e-25
AT3G61590.2 | Symbols: HWS | Galactose oxidase/kelch repeat supe... 88 1e-17
AT3G61590.1 | Symbols: HWS, HS | Galactose oxidase/kelch repeat ... 88 1e-17
AT5G43190.1 | Symbols: | Galactose oxidase/kelch repeat superfa... 84 2e-16
AT5G49610.1 | Symbols: | F-box family protein | chr5:20131448-2... 66 5e-11
AT1G76920.1 | Symbols: | F-box family protein | chr1:28892295-2... 56 5e-08
AT3G49980.1 | Symbols: | F-box and associated interaction domai... 55 7e-08
AT3G19410.1 | Symbols: | F-box and associated interaction domai... 55 8e-08
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 55 8e-08
AT3G07870.1 | Symbols: | F-box and associated interaction domai... 55 9e-08
AT1G14315.2 | Symbols: | F-box and associated interaction domai... 52 8e-07
AT3G17480.1 | Symbols: | F-box and associated interaction domai... 51 2e-06
AT1G12855.1 | Symbols: | F-box family protein | chr1:4382223-43... 50 2e-06
AT1G12870.1 | Symbols: | F-box and associated interaction domai... 50 4e-06
>AT1G27340.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr1:9495741-9497857 FORWARD
LENGTH=467
Length = 467
Score = 577 bits (1488), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/470 (59%), Positives = 346/470 (73%), Gaps = 20/470 (4%)
Query: 1 MEEGVAMLRHLIGQLKHLSESDPSQSPS-----------FILLQHHTNPQPPPRWSFFDI 49
MEE +AMLR LIGQL+ L + PS F++L H PQ W I
Sbjct: 1 MEEELAMLRQLIGQLQELLHNGSPPPPSSSSSLSSSSPSFLVLHH---PQYQNGWCLPCI 57
Query: 50 DDNSVDDFCDLVMTAGKSAS-FSTMDLVKHPSTXXXXXXXXXXXXXXXXXVTEAMEEQIW 108
+D S DD CD+VM GK F ++ VK P ++ M+++IW
Sbjct: 58 EDTSADDCCDIVMAGGKRPGIFKMLETVKPPVKRTRKERTQGKSCTEVDEISGNMDQEIW 117
Query: 109 KDFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQANPWFYTITHEH 168
++FP+DLFE V++RLP+ATFF+FR+VCR+WN+L+ S+SFS+ ++PQ PWFYTITHE+
Sbjct: 118 QEFPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTITHEN 177
Query: 169 ANSGAMYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCFLDIGHRNFYVCNPLTQSFKE 228
NSG +YDPS+KKW+H I LP K IVLPMASAGGLVCFLDIGHRNFYV NPLT+SF+E
Sbjct: 178 VNSGQVYDPSLKKWHHPIIPALPKKSIVLPMASAGGLVCFLDIGHRNFYVSNPLTKSFRE 237
Query: 229 LPARSVKVWSRIGVGMTINGNS----YKILWVTCDGEYEIYDSVGKSWSRQGNMPAGIKL 284
LPARS KVWSR+ VGMT+NGNS YK+LWV C+GEYE+YDS+ W+++G +P+ IKL
Sbjct: 238 LPARSFKVWSRVAVGMTLNGNSTSHGYKVLWVGCEGEYEVYDSLSNVWTKRGTIPSNIKL 297
Query: 285 PLSLNFRSQAVSIDNKVYFMHSDPEGIVSYDMETGVWTQYMIPGPLHLTDHALAECGGRI 344
P+ LNF+SQ V+I + +YFM +DPEGI+SYDM +G W Q++IPGP L+DH LA CG R+
Sbjct: 298 PVLLNFKSQPVAIHSTLYFMLTDPEGILSYDMVSGKWKQFIIPGPPDLSDHTLAACGERL 357
Query: 345 MLVGLLSKNAATCVCIWELQKMMLLWKEVDRMPNEWCLDFYGKHVRMTCLGNKG-LLMLS 403
MLVGLL+KNAATCVCIWELQKM LLWKEVDRMPN WCL+FYGKH+RM CLGNKG L++LS
Sbjct: 358 MLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHIRMNCLGNKGCLILLS 417
Query: 404 LRSRQMNRLVTYNIASREWLKVPACVVPHGRKRQWIAYGTAFHPCLAAVA 453
LRSRQMNRL+TYN +REW KVP C VP GRKR WIA GTAFHP A A
Sbjct: 418 LRSRQMNRLITYNAVTREWTKVPGCTVPRGRKRLWIACGTAFHPSPTARA 467
>AT1G30950.1 | Symbols: UFO | F-box family protein |
chr1:11036180-11037508 FORWARD LENGTH=442
Length = 442
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 160/363 (44%), Gaps = 46/363 (12%)
Query: 103 MEEQIWKDFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQ-VPQANPWF 161
M+ +IW P L + VIA LP FFR R VC+R+ SLL S +F + Q +P + F
Sbjct: 42 MDGRIWSKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNCF 101
Query: 162 YTITHEHANS-----------------GAMYDPSVKKWYHLTISTLPTKLIVLPMASAGG 204
H+ S G ++DP+ +WY L+ + +P+ P S+GG
Sbjct: 102 LFFKHKTLKSYIYKRGGTNDDDSNKAEGFLFDPNEIRWYRLSFAYIPSGFY--PSGSSGG 159
Query: 205 LVCFL--DIGHRNFYVCNPLTQSFKELPARS-VKVWSRIGVGMTINGNSYKILWVTCDGE 261
LV ++ + G + +CNPL S +LP S +++ IG+ +T +
Sbjct: 160 LVSWVSEEAGLKTILLCNPLVGSVSQLPPISRPRLFPSIGLSVTPTSIDVTVAGDDLISP 219
Query: 262 YEIYDSVGKS-----------WSRQGNMPAGIKLPLSLNFRSQAVSIDNKVYFMHSDPEG 310
Y + + +S W+ ++P L + V + K Y M+ P
Sbjct: 220 YAVKNLSSESFHVDAGGFFSLWAMTSSLPRLCSLE-----SGKMVYVQGKFYCMNYSPFS 274
Query: 311 IVSYDMETGVWTQYMIPGPLHLTDHALAECGGRIMLVGLLSK---NAATCVCIWELQKMM 367
++SY++ W + P L +L E GR++LV + K N + +W LQ+
Sbjct: 275 VLSYEVTGNRWIKIQAPMRRFLRSPSLLESKGRLILVAAVEKSKLNVPKSLRLWSLQQDN 334
Query: 368 LLWKEVDRMPNEWCLDFYGKH--VRMTCLGNKGLLMLSLRSRQMNRLVTYNIASREWLKV 425
W E++RMP F + C+GN+ +M+ LR + L ++I + WL V
Sbjct: 335 ATWVEIERMPQPLYTQFAAEEGGKGFECVGNQEFVMIVLRGTSLQLL--FDIVRKSWLWV 392
Query: 426 PAC 428
P C
Sbjct: 393 PPC 395
>AT5G15710.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr5:5122791-5124137 FORWARD
LENGTH=448
Length = 448
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 156/342 (45%), Gaps = 25/342 (7%)
Query: 103 MEEQIWKDFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQANPWFY 162
ME+ IW PEDL ++AR+P FR RSVC++WN +L SF + + V P
Sbjct: 99 MEDGIWAMLPEDLLNEILARVPPFMIFRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLL 158
Query: 163 TI--THEHANSGAMYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCFLDIGHRNF--YV 218
T +++ +K WY + + LP L + S+GGLVCF + F V
Sbjct: 159 TFWKNSPQIPQCSVFSLPLKTWYKIPFTFLPPWAFWL-VGSSGGLVCFSGLDGLTFRTLV 217
Query: 219 CNPLTQSFKELPARSVKVWSRIGVGMTINGNSYKILWVTCD--GE----YEIYDSVGKSW 272
CNPL QS++ LP+ ++ + + + S+K++ T D G+ E+YDS W
Sbjct: 218 CNPLMQSWRTLPSMHYNQQRQLIMVVDRSDKSFKVI-ATSDIYGDKSLPTEVYDSKTDKW 276
Query: 273 SRQGNMPAGIKLPLSLNF-RSQAVSIDNKVYFMHSDPEGIVSYDMETGVWTQYMIPGPLH 331
S MPA +N S+ D+++Y P G++ Y +++G W P
Sbjct: 277 SLHQIMPA-------VNLCSSKMAYCDSRLYLETLSPLGLMMYRLDSGQWEHIPAKFPRS 329
Query: 332 LTD-HALAECGGRIMLVGLLS-KNAATCVCIWELQKMMLLWKEVDRMPNEWCLDFYGKHV 389
L D + +A R+ LVG + + + IWEL + W E+ RMP ++
Sbjct: 330 LLDGYLVAGTQKRLFLVGRIGLYSTLQSMRIWELDHTKVSWVEISRMPPKYFRALLRLSA 389
Query: 390 -RMTCLGNKGLLMLSLRSRQMNRLVTYNIASREWLKVPACVV 430
R C G L+ + S + + YN+ + W + C +
Sbjct: 390 ERFECFGQDNLICFT--SWNQGKGLLYNVDKKIWSWISGCAL 429
>AT4G33160.1 | Symbols: | F-box family protein |
chr4:15994160-15995533 FORWARD LENGTH=457
Length = 457
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 176/395 (44%), Gaps = 59/395 (14%)
Query: 110 DFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQANPWFYTITHEHA 169
D +D+ E V++ LP + FFR SVC+RW S S+SF C+Q+P +PWF+ I ++
Sbjct: 69 DLNDDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSN 128
Query: 170 NSGAMYDPSVKKWYHLTISTL--PTKLIVLPMASAGGLVCFLDIGHRNFYVCNPLTQSFK 227
+S ++D + W +L + +P+AS+GGL+C+ +F + NPLT S +
Sbjct: 129 SSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTGSSR 188
Query: 228 ELPARSVKVWSRI-GVGMTING---NSYKILWVTCDGE-----YEIYDSVGKSW------ 272
++P++ + V MT +SY + VT GE ++IY+S SW
Sbjct: 189 DIPSQDNNNNKPLQAVAMTTTTVTPSSYTL--VTISGEIPNLSFKIYESNADSWSKDQEL 246
Query: 273 ------------------------SRQGNM---PAGIKLPLSLNFRSQAVSIDNK--VYF 303
S+QGN+ ++ S + S D VYF
Sbjct: 247 ESVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNNLQRSPSKQYSSVITVTDEAEIVYF 306
Query: 304 MHSDPEGIVSYDMETGVWTQY--MIPGPLHLTDHALAECGGRIMLVGLLSKNAATCVCIW 361
+ S IV+ D+ +T+ ++P P L EC G + ++ L + + IW
Sbjct: 307 LSS-YGTIVACDLTKRCFTELPKLLP-PFLEYSIDLVECEGTMYVILLSEFFESASLRIW 364
Query: 362 ELQKMMLLWKEVDRMPNEWCLDFYGKHVRMTCL---GNKGLLMLSLRSRQMN-RLVTYNI 417
L W +V +P + YGK + C+ GNK L+ + ++ R Y++
Sbjct: 365 RLDNNR-EWVQVGMLPPALSHELYGKKGDINCVGGAGNKILVCFNASPPEVYCRYFVYDL 423
Query: 418 ASREWLKVPACVVPHGRKRQWIAYGTAFHPCLAAV 452
+ EW ++P C G +++ +F P + A
Sbjct: 424 VAEEWNELPKC-FKDGEAVDFVS-ALSFQPRIEAT 456
>AT3G61590.2 | Symbols: HWS | Galactose oxidase/kelch repeat
superfamily protein | chr3:22792914-22794149 FORWARD
LENGTH=411
Length = 411
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 155/378 (41%), Gaps = 52/378 (13%)
Query: 111 FPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESF-SQHCAQVPQANPWFYTITHEHA 169
P+DL E +++ LPIA+ FR +VC+RWN +++S F PW++ T
Sbjct: 43 LPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQRPWYFMFTTTDD 102
Query: 170 NSGAMYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCFLDIGHRN-FYVCNPLTQSFKE 228
SG YDP ++KWY + + T + AS+ GLVCF+D RN YV NP+T+ ++
Sbjct: 103 PSGYAYDPIIRKWYSFDLPCIETSNWFV--ASSCGLVCFMDNDCRNKIYVSNPITKQWRT 160
Query: 229 L-----------PARSVKVWSRIGVGMTINGNSYKILWVTC----------DGEYEIYDS 267
L A S V +R + SY + V D +Y S
Sbjct: 161 LIEPPGHKSTDYTAMSTSV-NRANQAVNRANRSYSVSIVKSKQVPGNFFQWDLSIHLYSS 219
Query: 268 VGKSWSRQGNMPAGIKLPLSLNFRSQAVSIDNKVYFM------HSDPEGIVSYDMETGVW 321
+W+ N + +++V +N +YFM G+++ ++ +
Sbjct: 220 ETMTWTTLVN-----DVLSGWRGGNESVICNNVLYFMIYSTGGSDHRHGLIASNLSSIGS 274
Query: 322 T------QYMIPGPLHLTDHALAECGGRIMLVGLLSKN----AATCVCIWELQKMMLLWK 371
+ IP P LT L R+++VG + K+ + IW L+ W
Sbjct: 275 PSSGILMRSFIPMPCSLTCGRLMNLRERLVIVGGIGKHDRPEVIKGIGIWVLKGKE--WV 332
Query: 372 EVDRMPNEWCLDFYGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYNIASREWLKVPACVVP 431
E+ +MP + F G L+ ++S L+T+++ + W C V
Sbjct: 333 EMAKMPQRFFQGFGEFDEVFASSGTDDLVY--IQSYGSPALLTFDMNLKYWRWSQKCPVT 390
Query: 432 HGRKRQWIAYGTAFHPCL 449
Q + G F P L
Sbjct: 391 KKFPLQ-LFTGFCFEPRL 407
>AT3G61590.1 | Symbols: HWS, HS | Galactose oxidase/kelch repeat
superfamily protein | chr3:22792914-22794149 FORWARD
LENGTH=411
Length = 411
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 155/378 (41%), Gaps = 52/378 (13%)
Query: 111 FPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESF-SQHCAQVPQANPWFYTITHEHA 169
P+DL E +++ LPIA+ FR +VC+RWN +++S F PW++ T
Sbjct: 43 LPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQRPWYFMFTTTDD 102
Query: 170 NSGAMYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCFLDIGHRN-FYVCNPLTQSFKE 228
SG YDP ++KWY + + T + AS+ GLVCF+D RN YV NP+T+ ++
Sbjct: 103 PSGYAYDPIIRKWYSFDLPCIETSNWFV--ASSCGLVCFMDNDCRNKIYVSNPITKQWRT 160
Query: 229 L-----------PARSVKVWSRIGVGMTINGNSYKILWVTC----------DGEYEIYDS 267
L A S V +R + SY + V D +Y S
Sbjct: 161 LIEPPGHKSTDYTAMSTSV-NRANQAVNRANRSYSVSIVKSKQVPGNFFQWDLSIHLYSS 219
Query: 268 VGKSWSRQGNMPAGIKLPLSLNFRSQAVSIDNKVYFM------HSDPEGIVSYDMETGVW 321
+W+ N + +++V +N +YFM G+++ ++ +
Sbjct: 220 ETMTWTTLVN-----DVLSGWRGGNESVICNNVLYFMIYSTGGSDHRHGLIASNLSSIGS 274
Query: 322 T------QYMIPGPLHLTDHALAECGGRIMLVGLLSKN----AATCVCIWELQKMMLLWK 371
+ IP P LT L R+++VG + K+ + IW L+ W
Sbjct: 275 PSSGILMRSFIPMPCSLTCGRLMNLRERLVIVGGIGKHDRPEVIKGIGIWVLKGKE--WV 332
Query: 372 EVDRMPNEWCLDFYGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYNIASREWLKVPACVVP 431
E+ +MP + F G L+ ++S L+T+++ + W C V
Sbjct: 333 EMAKMPQRFFQGFGEFDEVFASSGTDDLVY--IQSYGSPALLTFDMNLKYWRWSQKCPVT 390
Query: 432 HGRKRQWIAYGTAFHPCL 449
Q + G F P L
Sbjct: 391 KKFPLQ-LFTGFCFEPRL 407
>AT5G43190.1 | Symbols: | Galactose oxidase/kelch repeat
superfamily protein | chr5:17340300-17341511 REVERSE
LENGTH=403
Length = 403
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 153/352 (43%), Gaps = 41/352 (11%)
Query: 103 MEEQIWKDFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESF-SQHCAQVPQANPWF 161
++ IW + P L E +++ LP T RS+ R SL+ S SF S H +P F
Sbjct: 43 LDPNIWSNLPNHLLEHILSLLPFKTLLTLRSISRHLRSLILSPSFISDHSFSLPS----F 98
Query: 162 YTITHEHA-NSGAMYDPSVKKWYHLTI-STLPTKLIVLPMASAGGLVCF--LDIGHRNFY 217
++H + NS +++P++ W L + +L ++S+ GL+CF +
Sbjct: 99 LLLSHPQSFNSFPLFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVSSLS 158
Query: 218 VCNPLTQSFKELPARSVKV----WSRIGVGMTINGNSYKILWVTCDGEYE------IYDS 267
+ NPLT+S +RS+K+ + + + + YKI + +YDS
Sbjct: 159 IFNPLTRS-----SRSIKLPCYPFPFELLSLVTSPKGYKIFTLCSSSSAASSRSVCLYDS 213
Query: 268 VGKSWSRQGNMPAGIKLPLSLNFRSQAVSIDNKVYFMHSDPEGIVSYDMETGVWTQYMIP 327
+SW + G G+ L F V + +YF S+P IVS D+ G WT
Sbjct: 214 GDRSWRKFG----GVDQVLPRGFNQDGVFYNGSLYFARSEPFLIVSVDLNDGKWTTATGD 269
Query: 328 GPLHLTDHA-----LAECGGRI--MLVGLLSKNAATCVCIWELQKMMLLWKEVDRMPNEW 380
G D +++ +I M+ G+ S + IWE ++ W EV+ +P+
Sbjct: 270 GVFPADDEITFARLVSDPEKKILYMVGGIGSNGICRSIKIWEFKEETESWIEVETLPDIV 329
Query: 381 CLDF----YGKHVRMTCLGNKGLLMLSLRSRQMNRLVTYNIASREWLKVPAC 428
C F Y + + CL +K M+ + ++ +++ R W VP C
Sbjct: 330 CRKFTSVCYHNYEHVYCLWHKE--MICVCCYNWPEILFFHVGRRTWHWVPKC 379
>AT5G49610.1 | Symbols: | F-box family protein |
chr5:20131448-20132527 REVERSE LENGTH=359
Length = 359
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 103 MEEQIWKDFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQANPWFY 162
M+ Q FP+++ ++ARLP+ + FRF+SVC+ W L + + F+ Q+
Sbjct: 1 MDNQKGALFPDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLL- 59
Query: 163 TITHEHANSGAMYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCFLDIGHRN-FYVCNP 221
+ +S + +++ L++ + ++ + S+ GL+C I + +YVCNP
Sbjct: 60 -VAEVSDSSSLICVDNLRGVSELSLDFVRDRVRI--RVSSNGLLCCSSIPEKGVYYVCNP 116
Query: 222 LTQSFKELPARSVKVWSR---------IGVGMTINGNSYKILWVTC--------DGEY-- 262
T+ +++LP + +R +G+ ++ N + ++ DG +
Sbjct: 117 STREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSFIC 176
Query: 263 EIYDSVGKSWSRQGNMPAGIKLPLSLNFRSQAVSIDNKVYFMHSDPEGIVSYDMETGVWT 322
++DS W + ++ + + ++Q V ++ ++++ S I++ D+E VW
Sbjct: 177 LVFDSESNKWRKFVSVLE--ECSFTHMSKNQVVFVNGMLHWLMSGLCYILALDVEHDVWR 234
Query: 323 QYMIPGPLHLTDHALAECGGRIMLV---GLLS 351
+ +P + + + G R+ L+ G LS
Sbjct: 235 KISLPDEIRIGNGG----GNRVYLLESDGFLS 262
>AT1G76920.1 | Symbols: | F-box family protein |
chr1:28892295-28893419 FORWARD LENGTH=374
Length = 374
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 83/205 (40%), Gaps = 24/205 (11%)
Query: 103 MEEQIWKDFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQAN---- 158
ME P D + + LPI RSVC+ +N LL S+ F + + P N
Sbjct: 1 MESSPVNCLPPDSLHQIFSSLPIRDIMICRSVCKFFNQLLTSQCFIEIISTRPPLNLLAL 60
Query: 159 ------PWFYTITHEHANSGA----MYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCF 208
+ HA + +YDP +W+ + LP + P+AS+ GL+
Sbjct: 61 RPPHHHHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFR-SPQPVASSSGLIYL 119
Query: 209 ----LDIGH--RNFYVCNPLTQSFKELPARSVKVWSRIGVGMTINGNSYKILWVTCDGEY 262
+D+ ++ CNPLT+ FK LP WSR G + + N +L Y
Sbjct: 120 WGDSIDLAESSKSLVACNPLTRQFKVLPQLG-SAWSRHGTVLVDSVNRVMVL-TELAALY 177
Query: 263 EIYDSVGKSWSR-QGNMPAGIKLPL 286
V W + N+P+ + P+
Sbjct: 178 YSGTVVANQWLKFSSNLPSKPRSPV 202
>AT3G49980.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:18530329-18531477
REVERSE LENGTH=382
Length = 382
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 37/274 (13%)
Query: 110 DFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFS-QHCAQVPQANPWFYTITHEH 168
+ P++L E ++ R+P + + R C+ WN L +FS +H + P+ + T+ E
Sbjct: 4 NLPQELLEEILCRVPATSLKQLRLTCKEWNRLFNDRTFSRKHFDKAPKQ--FLITVLEER 61
Query: 169 ANSGAMYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCFLDIGH-RNFYVCNPLTQSFK 227
++ S+ +L + S V + I H +VC L +
Sbjct: 62 CRLSSL---SINLHSGFPSEEFTGELSPIDYHSNSSQVIIMKIFHCDGLFVCTILKDTRI 118
Query: 228 EL--PARSVKVWSRIGVGMTINGN---------------SYKIL----WVTCDGEYEIYD 266
+ P K W + G + NG SYKIL + D E++IYD
Sbjct: 119 VVWNPCTGQKKWIQTGENLDENGQDFVLGYYQDNKSSDKSYKILSYKGYNYGDQEFKIYD 178
Query: 267 SVGKSWSRQGNMPAGIKLPLSLNFRSQAVSIDNKVYFMHSDPE----GIVSYDMETGVWT 322
+W P ++R VS+ Y+ D + G++S+D T +
Sbjct: 179 IKSNTWRNLDVTPIPGNYFTCSDYR---VSLKGNTYWFAYDLKDEQLGLISFDYTTERFE 235
Query: 323 QYMIPGPLHLTDH--ALAECGGRIMLVGLLSKNA 354
+ +P ++DH +L+ G + V L K+A
Sbjct: 236 RLWLPFQCDISDHDYSLSVVGEEKLSVVLQLKDA 269
>AT3G19410.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6729585-6730706
FORWARD LENGTH=373
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 27/271 (9%)
Query: 110 DFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASE---SFSQHCAQVPQANPWFYTITH 166
+ P+DL E ++ +P R RS C+ WN L + + + Q P T
Sbjct: 5 ELPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAAKQFLPLMSTNEE 64
Query: 167 EHANSGAMYD--PSV----KKWYHLTISTLPTKLIVLPMASAGGLVCFLDIGHRNFYVCN 220
A S ++ PS+ K W ++ S I S G L+CF G + V N
Sbjct: 65 LCAMSVNLHGTIPSLEVKDKPWLFVSDSKHCDIEISRIFHSGGLLLCFSRDGEISIIVWN 124
Query: 221 PLTQSFKELPARSVKVWSR---IGVGMTINGNSYKILWVTCDG-EYEIYDSVGKSWSRQG 276
PLT + + R+ + R +G YKIL D ++EI++ SW
Sbjct: 125 PLTSETRLIRTRNRRDKGRNFVLGYYQEDKKTYYKILSFYLDSKDFEIFEFNSDSWRFID 184
Query: 277 NMPAGIKLPLSLNFRSQAVSIDNKVYFMHSDPEGI--VSYDMETGVWTQYMIPGPLHLTD 334
++ G LSL + Q VS+ Y D + + YD T+ +P PL
Sbjct: 185 DICPG----LSLLYSDQCVSLKGNTYMFAIDDLSVSLLKYDFS----TETSVPVPLPYKS 236
Query: 335 HALAECGGRIM----LVGLLSKNAATCVCIW 361
+ ++ L LL ++ ++ IW
Sbjct: 237 RSFEAISLSVVREEKLSVLLQRDKSSKTEIW 267
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD LENGTH=441
Length = 441
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 63 TAGKS--ASFSTMDLVKHPSTXXXXXXXXXXXXXXXXXVTEAMEEQIWKDFPEDLFEAVI 120
T GKS S +T+ +V HP+ E + + P+ L E ++
Sbjct: 47 TNGKSPRCSKATLAVVVHPTASTTHDDFLRKKQERSGKSPSCSETTLAVELPDVLVEEIL 106
Query: 121 ARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQANPWF--YTITHEHANSGAMYDPS 178
RLP+ R +S+ + W SL+ S+ ++ ++ + IT E + S ++
Sbjct: 107 QRLPVKYLVRLKSISKGWKSLIESDHLAEKHLRLLEKKYGLKEIKITVERSTSKSICIKF 166
Query: 179 VKKWYHLT-ISTLPTKLIVLPMASAGGLVCFLDIGHRNFYVCNPLTQSFKEL-PARSVKV 236
+ + I++ L+ +P S GLVC ++ Y+ NP+T + L P R K+
Sbjct: 167 FSRRSGMNAINSDSDDLLRVP-GSCNGLVCVYELDSVYIYLLNPMTGVTRTLTPPRGTKL 225
Query: 237 WSRIGVGMTINGNSYKIL 254
+G G+ + +YK++
Sbjct: 226 --SVGFGIDVVTGTYKVM 241
>AT3G07870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2510871-2512124
FORWARD LENGTH=417
Length = 417
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 136/370 (36%), Gaps = 77/370 (20%)
Query: 109 KDFPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASES-------------FSQHCAQVP 155
+ PED+ + +RLPI++ R VCR W S+L HC
Sbjct: 26 ESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Query: 156 QANPWFYTITHEHANSGAMYDPSVKKWYHLTISTLPTKLIVLPMASAGGLVCFLD-IGHR 214
+ F ++ E KK+ S++P +V S GL+C D + +
Sbjct: 86 RNGLHFLDLSEEEKRI------KTKKFTLRFASSMPEFDVV---GSCNGLLCLSDSLYND 136
Query: 215 NFYVCNPLTQSFKELPARSVKVWSR---IGVGMTINGNSYKILWV-----TCDGEYEIYD 266
+ Y+ NP T + ELP S K + G G YK+L + + IY
Sbjct: 137 SLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYR 196
Query: 267 SVGKSWSRQGNMPAGI----------------KLPLSLNFRSQAVSIDNKVYFM-----H 305
G+ +Q + K P RS ++ +++F+ H
Sbjct: 197 GRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRH 256
Query: 306 SDPEGIVSYDMETGVWTQYMIP--GPLHLTDHALAECGGRIMLVGLLSKNAATCVCIWEL 363
VS+D+E + + P G L+ T+H L G L ++ N + IW +
Sbjct: 257 VPDRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKG--CLCAVVYGNYGK-LDIWVM 313
Query: 364 QKMML-----------------LWKEVDRMPNEWCLDFYGKHVRMTCLGNKGLLMLSLRS 406
+ + L + +DR W GK VR+ CL G ++L +S
Sbjct: 314 KTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKS 373
Query: 407 RQMNRLVTYN 416
R LV Y+
Sbjct: 374 RV---LVAYD 380
>AT1G14315.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4886861-4887933
REVERSE LENGTH=303
Length = 303
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 36/223 (16%)
Query: 111 FPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQANPWFYTITHEHAN 170
P D E ++ R+P+ + RF+S C++W + S+ F QA + + N
Sbjct: 4 LPHDTVEDILERVPVKSLLRFKSACKQWKLTIESQYF--------QAKQLICSAGGKDLN 55
Query: 171 SGAMYD-PSVKKW-YHLTISTLPTKLIVLPMA------------SAGGLVCFLDIGHRNF 216
+ + PS +H+T + P K VL ++ S GLVC D N
Sbjct: 56 LVLVSEVPSTLVLPHHVTADSPPLKTNVLLISSERYHIYQLFHNSCDGLVCLFDYQTLNN 115
Query: 217 YVCNPLTQSFKELPARSVKVWSRIGVG--MTINGNSYKILWVTCDGEYEIYDSVGKSWSR 274
V NP T+ + P S W I IN +S + + DG +Y GK
Sbjct: 116 IVYNPATRWHRRFPVSSTNTWRYINPSSPYRINTSSSRGHALYVDG--SLYWLTGK---- 169
Query: 275 QGNMPAGIKLPLSLNFRSQAVSIDNKVYFMHSDPEGIVSYDME 317
IK+ L+L+ ++ + +K F +D I++ +
Sbjct: 170 -----KEIKV-LALDLHTETFQVISKAPFAEADHRNIITRSLN 206
>AT3G17480.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:5983199-5984320
FORWARD LENGTH=373
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 25/217 (11%)
Query: 113 EDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQANPWFYTITHEHANSG 172
EDL E +++R+P + R RS C++WN++L F + + + +S
Sbjct: 13 EDLVEDILSRVPATSLVRLRSTCKQWNAILNDRRFIKKHFDTAEKEYLDMLLRSLRVSSM 72
Query: 173 AM--------YDPSVKKWYHLTISTL---PTKLIVLPMASAGGLVCFLDIGHRNFYVCNP 221
++ DPS++ L + L K+ + GL+ F + V NP
Sbjct: 73 SVNLHGLHDNIDPSIELKRELNLKGLLCNSGKVESFEVFHCNGLLLFTNTS--TIVVWNP 130
Query: 222 LTQSFKELPARSVKV-WSRIGVGMTINGN---SYKILWVTCDG---EYEIYDSVGKSWSR 274
T K + S + + +G N N YKIL DG E EIY+ SW
Sbjct: 131 CTGQTKWIQTESANTRYHKYALGYE-NKNLCRDYKILRFLDDGTNFELEIYEFNSSSW-- 187
Query: 275 QGNMPAGIKLPLSLNFRSQAVSIDNKVYFMHSDPEGI 311
+ +++ L+ SQ +S+ Y++ D +
Sbjct: 188 --RVLDSVEIDFELDIGSQGMSVKGNTYWIVIDDHEV 222
>AT1G12855.1 | Symbols: | F-box family protein |
chr1:4382223-4383611 FORWARD LENGTH=462
Length = 462
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 73/181 (40%), Gaps = 35/181 (19%)
Query: 111 FPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQAN----PWFYTITH 166
P D+ E + RLP+ + +S+ ++W S + S SF + ++ + + P ++
Sbjct: 71 LPNDVVEEIFLRLPVKAIIQLKSLSKQWRSTIESRSFEERHLKIVERSRVDFPQVMVMSE 130
Query: 167 EHANSGAMYD---PSVKKWYHL----TISTLPTKLIVLPMA---------SAGGLVCFLD 210
E++ G+ + P + + S L + LI P S GL C
Sbjct: 131 EYSLKGSKGNQPRPDTDIGFSTICLESASILSSTLITFPQGFQHRIYASESCDGLFCIHS 190
Query: 211 IGHRNFYVCNPLTQSFKELPARSVKV-----------WSRIG----VGMTINGNSYKILW 255
+ + YV NP T+ F++LP ++ W I + N YK++W
Sbjct: 191 LKTQAIYVVNPATRWFRQLPPARFQILMQKLYPTQDTWIDIKPVVCYTAFVKANDYKLVW 250
Query: 256 V 256
+
Sbjct: 251 L 251
>AT1G12870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4387129-4389110
REVERSE LENGTH=416
Length = 416
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 84/206 (40%), Gaps = 43/206 (20%)
Query: 111 FPEDLFEAVIARLPIATFFRFRSVCRRWNSLLASESFSQHCAQVPQA----NPWFYTITH 166
P+D+ E + +LP+ RF+S+ ++W S L S FSQ ++ + +P IT
Sbjct: 33 LPDDVVEEIFLKLPVKALMRFKSLSKQWRSTLESCYFSQRHLKIAERSHVDHPKVMIITE 92
Query: 167 EHANSGAMYDPSVKKWYHL----TISTLPTKLIVLPMA---------SAGGLVCFLDIGH 213
+ ++P ++ + ++S L + L P S G+ C
Sbjct: 93 K-------WNPDIEISFRTISLESVSFLSSALFNFPRGFHHPIYASESCDGIFCIHSPKT 145
Query: 214 RNFYVCNPLTQSFKELPARSVKVWSR--------------IGVGMTINGNSYKILWV-TC 258
++ YV NP T+ F++LP +++ + + YK++W+
Sbjct: 146 QDIYVVNPATRWFRQLPPARFQIFMHKLNPTLDTLRDMIPVNHLAFVKATDYKLVWLYNS 205
Query: 259 DG----EYEIYDSVGKSWSRQGNMPA 280
D + E++D +W +P+
Sbjct: 206 DASRVTKCEVFDFKANAWRYLTCIPS 231