Miyakogusa Predicted Gene
- Lj4g3v2551480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2551480.1 tr|A8I9X7|A8I9X7_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_141205 PE=4
SV=1,32.95,2e-18,seg,NULL; DUF493,Uncharacterised protein family
UPF0250; YbeD-like,NULL,CUFF.51118.1
(232 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27385.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 231 2e-61
AT1G27385.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 230 5e-61
AT1G27385.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 225 2e-59
AT1G27385.4 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 225 2e-59
>AT1G27385.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF493 (InterPro:IPR007454); Has 76
Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr1:9511129-9512820 REVERSE LENGTH=202
Length = 202
Score = 231 bits (590), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/147 (78%), Positives = 128/147 (87%), Gaps = 5/147 (3%)
Query: 86 LRCSHDETPSFQDDQGGPPQEAVLKAISEVSKTEGRVGQTTNMVIGGTVTDDSTNEWLAL 145
L CSH++ Q DQG PPQEAVLKAISEVSKT+GRVG+TTNM+IGGTV DDS +WL L
Sbjct: 61 LNCSHND----QSDQG-PPQEAVLKAISEVSKTDGRVGKTTNMIIGGTVADDSAKDWLEL 115
Query: 146 DQKVNSYPTNRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGRVKQKLSARGKYVSVNIG 205
DQKVN+YPT RGFTAIGTGG DFV AMVVAVESVI + IP+ VKQ LS++GKYVSVNIG
Sbjct: 116 DQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIG 175
Query: 206 PIQVVSSEQVQAVYNAMRRDDRMKYFL 232
PIQVVSSEQVQAVYNAMRRD+RMKYFL
Sbjct: 176 PIQVVSSEQVQAVYNAMRRDERMKYFL 202
>AT1G27385.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF493 (InterPro:IPR007454); Has 77
Blast hits to 77 proteins in 22 species: Archae - 0;
Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 72;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
| chr1:9510475-9512820 REVERSE LENGTH=230
Length = 230
Score = 230 bits (587), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/147 (78%), Positives = 127/147 (86%), Gaps = 5/147 (3%)
Query: 86 LRCSHDETPSFQDDQGGPPQEAVLKAISEVSKTEGRVGQTTNMVIGGTVTDDSTNEWLAL 145
L CSH++ Q DQG PPQEAVLKAISEVSKT+GRVG+TTNM+IGGTV DDS +WL L
Sbjct: 61 LNCSHND----QSDQG-PPQEAVLKAISEVSKTDGRVGKTTNMIIGGTVADDSAKDWLEL 115
Query: 146 DQKVNSYPTNRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGRVKQKLSARGKYVSVNIG 205
DQKVN+YPT RGFTAIGTGG DFV AMVVAVESVI + IP+ VKQ LS++GKYVSVNIG
Sbjct: 116 DQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIG 175
Query: 206 PIQVVSSEQVQAVYNAMRRDDRMKYFL 232
PIQVVSSEQVQAVYNAMRRD+RMKYF
Sbjct: 176 PIQVVSSEQVQAVYNAMRRDERMKYFF 202
>AT1G27385.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF493
(InterPro:IPR007454); Has 76 Blast hits to 76 proteins
in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0;
Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink). | chr1:9511129-9512820 REVERSE
LENGTH=201
Length = 201
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/147 (78%), Positives = 127/147 (86%), Gaps = 6/147 (4%)
Query: 86 LRCSHDETPSFQDDQGGPPQEAVLKAISEVSKTEGRVGQTTNMVIGGTVTDDSTNEWLAL 145
L CSH++ Q DQG PPQEAVLKAIS VSKT+GRVG+TTNM+IGGTV DDS +WL L
Sbjct: 61 LNCSHND----QSDQG-PPQEAVLKAIS-VSKTDGRVGKTTNMIIGGTVADDSAKDWLEL 114
Query: 146 DQKVNSYPTNRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGRVKQKLSARGKYVSVNIG 205
DQKVN+YPT RGFTAIGTGG DFV AMVVAVESVI + IP+ VKQ LS++GKYVSVNIG
Sbjct: 115 DQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIG 174
Query: 206 PIQVVSSEQVQAVYNAMRRDDRMKYFL 232
PIQVVSSEQVQAVYNAMRRD+RMKYFL
Sbjct: 175 PIQVVSSEQVQAVYNAMRRDERMKYFL 201
>AT1G27385.4 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF493
(InterPro:IPR007454); Has 79 Blast hits to 79 proteins
in 23 species: Archae - 0; Bacteria - 6; Metazoa - 0;
Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink). | chr1:9510475-9512820 REVERSE
LENGTH=254
Length = 254
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/147 (78%), Positives = 127/147 (86%), Gaps = 6/147 (4%)
Query: 86 LRCSHDETPSFQDDQGGPPQEAVLKAISEVSKTEGRVGQTTNMVIGGTVTDDSTNEWLAL 145
L CSH++ Q DQG PPQEAVLKAIS VSKT+GRVG+TTNM+IGGTV DDS +WL L
Sbjct: 61 LNCSHND----QSDQG-PPQEAVLKAIS-VSKTDGRVGKTTNMIIGGTVADDSAKDWLEL 114
Query: 146 DQKVNSYPTNRGFTAIGTGGEDFVQAMVVAVESVIQQPIPQGRVKQKLSARGKYVSVNIG 205
DQKVN+YPT RGFTAIGTGG DFV AMVVAVESVI + IP+ VKQ LS++GKYVSVNIG
Sbjct: 115 DQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSSKGKYVSVNIG 174
Query: 206 PIQVVSSEQVQAVYNAMRRDDRMKYFL 232
PIQVVSSEQVQAVYNAMRRD+RMKYFL
Sbjct: 175 PIQVVSSEQVQAVYNAMRRDERMKYFL 201