Miyakogusa Predicted Gene
- Lj4g3v2539410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2539410.1 Non Chatacterized Hit- tr|G7LFG8|G7LFG8_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,82.46,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; no desc,CUFF.51113.1
(671 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 929 0.0
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 522 e-148
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 504 e-143
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 500 e-141
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 498 e-141
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 490 e-138
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 489 e-138
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 483 e-136
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 482 e-136
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 476 e-134
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 476 e-134
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 475 e-134
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 474 e-134
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 467 e-131
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 462 e-130
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 462 e-130
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 461 e-130
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 458 e-129
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 457 e-129
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 455 e-128
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 453 e-127
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 451 e-126
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 448 e-126
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 444 e-124
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 442 e-124
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 442 e-124
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 441 e-123
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 440 e-123
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 437 e-123
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 437 e-122
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 436 e-122
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 435 e-122
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 433 e-121
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 432 e-121
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 430 e-120
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 428 e-120
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 428 e-120
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-120
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 426 e-119
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 425 e-119
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 424 e-119
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 422 e-118
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 422 e-118
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 422 e-118
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 422 e-118
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-118
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 418 e-117
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-115
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 410 e-114
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 409 e-114
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 396 e-110
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-110
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 393 e-109
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 391 e-109
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 390 e-108
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-105
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 377 e-104
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 373 e-103
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 363 e-100
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 361 e-100
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 360 1e-99
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 360 1e-99
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 358 6e-99
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 5e-98
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 7e-97
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 351 1e-96
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 350 1e-96
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 347 1e-95
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 345 7e-95
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 4e-93
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 338 7e-93
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 7e-92
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 334 1e-91
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 2e-91
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 2e-91
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 4e-91
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 328 7e-90
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 326 3e-89
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 325 8e-89
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 9e-89
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 322 5e-88
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 322 5e-88
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 321 8e-88
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 321 9e-88
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 7e-87
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 1e-86
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 5e-86
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 8e-85
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 308 8e-84
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 307 2e-83
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 6e-83
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 303 4e-82
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 9e-82
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 1e-81
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 5e-81
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 7e-81
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 5e-80
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 2e-78
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 289 4e-78
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 8e-77
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 284 1e-76
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 284 1e-76
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 5e-76
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 281 1e-75
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 281 1e-75
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 281 1e-75
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 8e-74
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 3e-71
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 4e-71
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 6e-69
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 5e-68
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 250 2e-66
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 6e-66
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 7e-65
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 8e-62
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 3e-60
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 1e-59
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 209 4e-54
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 1e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 7e-51
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 1e-46
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 4e-30
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 113 5e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 107 3e-23
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 106 5e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 7e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 103 4e-22
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 6e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 6e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 102 1e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 100 4e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 97 4e-20
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 97 4e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 5e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 96 1e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 2e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 3e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 90 4e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 89 8e-18
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 87 3e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 86 6e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 2e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 3e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 7e-15
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 79 1e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 76 7e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 8e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 3e-11
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 67 4e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 64 3e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 64 5e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 8e-10
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 63 8e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 63 9e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 62 9e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 61 2e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 60 4e-09
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 8e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 3e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 6e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 1e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 1e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 51 3e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/661 (66%), Positives = 531/661 (80%), Gaps = 6/661 (0%)
Query: 17 SSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYA 76
SS K +SP V LLG+ LD YPDI L+ VH+++I + N SLG+KLMRAYA
Sbjct: 26 SSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYA 85
Query: 77 ACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPC 136
+ + +ARKVFDEI ERNV+ NVMIRSYVNN +Y + + VF M RPD+YT+PC
Sbjct: 86 SLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPC 145
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD 196
VLKACSCS + G ++HG+ KV L LFVGNGL+SMYGKCG L EAR VLDEM RRD
Sbjct: 146 VLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD 205
Query: 197 VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDI 256
VVSWNS+V GYAQN RFDDALEVCREM+ + DAGTMASL+PAV+NT+++NV+YVKD+
Sbjct: 206 VVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDM 265
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSAL 316
F + KKSLVSWNVMI VYMKN+MP A++LY +ME EPDA++ SVLPACGD SAL
Sbjct: 266 FFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 317 LLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAY 376
LG++IH Y+ERKKL PNLLLEN+LIDMYA+CGCLE A+ VF+ MK RDV SWT++ISAY
Sbjct: 326 SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY 385
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
G +G+GC+A+ALFS++Q+SG+ PD IAFV L+ACSH+GLLEEG+ FK MTD Y+ITPR
Sbjct: 386 GFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL 496
+EH AC+VDLLGRAG+V EAY I+ M +EPNERVWG LL +CRV+S+ DIGLLAAD L
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 497 QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGD 556
QL+PEQSGYYVLLSNIYAKAGRW+EVT +R++MK + ++K PG SNVE+N +HTFL GD
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGD 565
Query: 557 TSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLN 616
SHPQS EIY EL VLV KMKELGYVP+++SALHDVEEEDKE HLAVHSEKLAIVFAL+N
Sbjct: 566 RSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMN 625
Query: 617 THE------SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDY 670
T E + IRITKNLR+CGDCH+AAKLIS+I REI+IRDTNRFH F+ G+CSCGDY
Sbjct: 626 TKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDY 685
Query: 671 W 671
W
Sbjct: 686 W 686
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 522 bits (1345), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/659 (39%), Positives = 403/659 (61%), Gaps = 37/659 (5%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
LK +H +L+ L + L KL+ A ++ G+ AR+VFD++ + +N +IR Y
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
N + DALL++ M PD++T+P +LKACS +L+ G +H + ++ D ++FV
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 169 GNGLISMYGKCGCLLEARYVLD--EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
NGLI++Y KC L AR V + +P R +VSW ++V+ YAQN +ALE+ +M +
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 227 GQKPDAGTMASLMPAVTNTS-------------------------SDNVLYVK------- 254
KPD + S++ A T S N +Y K
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 255 -DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+F ++ +L+ WN MI+ Y KN AID++ +M +V PD I+ S + AC +
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
+L R ++EYV R R ++ + ++LIDM+A+CG +E A+ VFD+ RDV W+++I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
YG+ G+ A++L+ M+ G+ P+ + F+ +L AC+HSG++ EG +F +M D ++I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKI 455
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAAD 493
P+ +H+AC++DLLGRAG +D+AY+VIK MP++P VWG LLS+C+ + ++++G AA
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFL 553
L + P +G+YV LSN+YA A W V EVR MK + + K G S VE+ ++ F
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575
Query: 554 AGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFA 613
GD SHP+ +EI ++ + ++KE G+V D++LHD+ +E+ E L HSE++AI +
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635
Query: 614 LLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
L++T + +P+RITKNLR C +CH A KLISK+V REIV+RDTNRFHHFKDG+CSCGDYW
Sbjct: 636 LISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 174/406 (42%), Gaps = 36/406 (8%)
Query: 6 SRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENP 65
SRN AL+ LA L KA + + VH ++ L +
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 66 SLGIKLMRAYAACGEPGTARKVFD--EISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
+ L+ YA C G+AR VF+ + ER +V + ++ +Y N +AL +F +M
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMR 214
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
+PD VL A +C +L+ G +H +++K+ L+ + L +MY KCG +
Sbjct: 215 KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVA 274
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
A+ + D+M +++ WN+M++GYA+N +A+++ EM + +PD ++ S + A
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACA 334
Query: 244 NTSS-----------DNVLYVKDIFINLE----------------------KKSLVSWNV 270
S Y D+FI+ + +V W+
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
MI Y + AI LY ME+ V P+ +T +L AC + G + K
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK 454
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLISA 375
+ P +ID+ R G L+ A +V M + V W +L+SA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 169/381 (44%), Gaps = 39/381 (10%)
Query: 3 PPLSRNISKLQALVSSFQKSLASFQSPVIAVELLG--KALDQYPDIIAL----------- 49
P R I A+VS++ ++ P+ A+E+ + +D PD +AL
Sbjct: 181 PLPERTIVSWTAIVSAYAQN----GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 50 -----KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
+++H ++ + P L I L YA CG+ TA+ +FD++ N++ +N MI
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296
Query: 105 SYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
Y N + +A+ +F EM+N RPD + + AC+ +L ++ + +
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
++F+ + LI M+ KCG + AR V D RDVV W++M+ GY + R +A+ + R M+
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMI--TVYMKNSMPG 282
G P+ T L+ A ++ + ++ +N M + +
Sbjct: 417 RGGVHPNDVTFLGLLMACNHS-------------GMVREGWWFFNRMADHKINPQQQHYA 463
Query: 283 NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL--LENS 340
IDL + + + I C V P ALL + H +VE + L ++ S
Sbjct: 464 CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPS 523
Query: 341 LIDMYARCGCLEDAQKVFDKM 361
Y + L A +++D++
Sbjct: 524 NTGHYVQLSNLYAAARLWDRV 544
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/637 (39%), Positives = 375/637 (58%), Gaps = 32/637 (5%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
LG +++ Y ARKVFD + E++ + +N MI Y N Y +++ VFR+++N
Sbjct: 156 LGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINES 215
Query: 127 -FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
R D T +L A + LR G+Q+H K + +V G IS+Y KCG +
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP----- 240
+ E + D+V++N+M+ GY N + +L + +E+ G + + T+ SL+P
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 241 -----------------------AVTNTSS--DNVLYVKDIFINLEKKSLVSWNVMITVY 275
A+T S + + + +F +KSL SWN MI+ Y
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+N + +AI L+ +M+KSE P+ +T +L AC L AL LG+ +H+ V ++
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+ +LI MYA+CG + +A+++FD M ++ +W ++IS YG+ GQG AL +F EM NS
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
GI+P + F+ +L ACSH+GL++EG F M Y P ++H+AC+VD+LGRAG +
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 456 AYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAK 515
A I+ M +EP VW TLL +CR++ + ++ ++ L +L P+ GY+VLLSNI++
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Query: 516 AGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGK 575
+ + VR K+R++ K PG + +E+ H F +GD SHPQ KEIYE+L L GK
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGK 695
Query: 576 MKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDC 634
M+E GY PET+ ALHDVEEE++E + VHSE+LAI F L+ T + IRI KNLRVC DC
Sbjct: 696 MREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDC 755
Query: 635 HIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
H KLISKI R IV+RD NRFHHFKDG+CSCGDYW
Sbjct: 756 HTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 214/467 (45%), Gaps = 40/467 (8%)
Query: 46 IIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRS 105
I L H ++I + SL KL + + G AR +F + +V +NV++R
Sbjct: 33 ISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRG 92
Query: 106 YVNNRWYNDALLVFREMVNGG-FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
+ N + +L VF + +P++ TY + A S + R G +HG + D
Sbjct: 93 FSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDS 152
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM- 223
L +G+ ++ MY K + +AR V D MP +D + WN+M++GY +N + ++++V R++
Sbjct: 153 ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLI 212
Query: 224 DDLGQKPDAGTMASLMPAV----------------TNTSSDNVLYVKDIFINL------- 260
++ + D T+ ++PAV T T + YV FI+L
Sbjct: 213 NESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKI 272
Query: 261 ----------EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
K +V++N MI Y N ++ L+ ++ S + T S++P
Sbjct: 273 KMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVS 332
Query: 311 GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWT 370
G L+L IH Y + + + +L +Y++ +E A+K+FD+ + + SW
Sbjct: 333 GH---LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWN 389
Query: 371 SLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
++IS Y G +A++LF EMQ S SP+ + ILSAC+ G L GK + +
Sbjct: 390 AMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRS 448
Query: 431 YRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
I L+ + + G + EA + M + NE W T++S
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMIS 494
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 101/193 (52%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
+H + N + S+ L Y+ E +ARK+FDE E+++ +N MI Y N
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
DA+ +FREM F P+ T C+L AC+ L G +H + + +++V
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
LI MY KCG + EAR + D M +++ V+WN+M++GY + + +AL + EM + G P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 232 AGTMASLMPAVTN 244
T ++ A ++
Sbjct: 521 PVTFLCVLYACSH 533
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 500 bits (1287), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/692 (36%), Positives = 400/692 (57%), Gaps = 71/692 (10%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H + I S + S I ++ Y A +F + V+ + +IR + +
Sbjct: 25 KQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
++ AL F EM G PD+ +P VLK+C+ +LRFG +HG ++++ +D +L+ G
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 170 NGLISMYGKC-------------------------------GCLL-----EARYVLDEMP 193
N L++MY K C++ R V + MP
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP 203
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA------------ 241
R+DVVS+N+++AGYAQ+ ++DAL + REM KPD+ T++S++P
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 242 ----VTNTSSDNVLYVKDIFINLEKKSL-----------------VSWNVMITVYMKNSM 280
V D+ +Y+ +++ KS +SWN ++ Y++N
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
A+ L+ QM ++V+P A+ +SV+PAC L+ L LG+++H YV R N+ + ++
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
L+DMY++CG ++ A+K+FD+M D SWT++I + + G G A++LF EM+ G+ P+
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI 460
+AFVA+L+ACSH GL++E YF MT Y + +EH+A + DLLGRAG+++EAY+ I
Sbjct: 444 QVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFI 503
Query: 461 KQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWK 520
+M +EP VW TLLSSC V+ N+++ A+ + + E G YVL+ N+YA GRWK
Sbjct: 504 SKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWK 563
Query: 521 EVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELG 580
E+ ++R M+++ +RK P S +E+ ++ H F++GD SHP +I E L ++ +M++ G
Sbjct: 564 EMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEG 623
Query: 581 YVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAK 639
YV +T LHDV+EE K L HSE+LA+ F ++NT + IR+TKN+R+C DCH+A K
Sbjct: 624 YVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIK 683
Query: 640 LISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
ISKI REI++RD +RFHHF G CSCGDYW
Sbjct: 684 FISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 33/339 (9%)
Query: 40 LDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFY 99
+Y D+I K +H +I + +G L+ YA + +VF + R+ + +
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 100 NVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
N ++ YV N YN+AL +FR+MV +P + V+ AC+ L G QLHG +L+
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 160 VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEV 219
N+F+ + L+ MY KCG + AR + D M D VSW +++ G+A + +A+ +
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 220 CREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKN- 278
EM G KP+ +++ A ++ + L ++ +N M VY N
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSH-------------VGLVDEAWGYFNSMTKVYGLNQ 478
Query: 279 ------------SMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE-- 324
G + Y + K VEP +++L +C L L ++ E
Sbjct: 479 ELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKI 538
Query: 325 -YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
V+ + + +L+ N MYA G ++ K+ +M+
Sbjct: 539 FTVDSENMGAYVLMCN----MYASNGRWKEMAKLRLRMR 573
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 498 bits (1282), Expect = e-141, Method: Compositional matrix adjust.
Identities = 266/651 (40%), Positives = 391/651 (60%), Gaps = 52/651 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y G+ +++ + R++V +N ++ S N +AL REMV G PD
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
+T VL ACS + LR G +LH LK LD N FVG+ L+ MY C +L R V
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD-LGQKPDAGTMASLMPAVTNTSS- 247
D M R + WN+M+AGY+QN +AL + M++ G ++ TMA ++PA + +
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 248 ---------------DNVLYVKD-----------------IFINLEKKSLVSWNVMITVY 275
D +V++ IF +E + LV+WN MIT Y
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 276 MKNSMPGNAIDLYLQMEKSE-----------VEPDAITCASVLPACGDLSALLLGRRIHE 324
+ + +A+ L +M+ E ++P++IT ++LP+C LSAL G+ IH
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 325 YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCN 384
Y + L ++ + ++L+DMYA+CGCL+ ++KVFD++ ++V +W +I AYGM G G
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQE 601
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
A+ L M G+ P+ + F+++ +ACSHSG+++EG F M DY + P +H+AC+V
Sbjct: 602 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVV 661
Query: 445 DLLGRAGRVDEAYDVIKQMPLEPNER-VWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQS 503
DLLGRAGR+ EAY ++ MP + N+ W +LL + R+++N++IG +AA NL+QL P +
Sbjct: 662 DLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVA 721
Query: 504 GYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSK 563
+YVLL+NIY+ AG W + TEVR MK + +RK PG S +E +VH F+AGD+SHPQS+
Sbjct: 722 SHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 781
Query: 564 EIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHESP-- 621
++ L L +M++ GYVP+T LH+VEE++KE L HSEKLAI F +LNT SP
Sbjct: 782 KLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNT--SPGT 839
Query: 622 -IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
IR+ KNLRVC DCH+A K ISKIV REI++RD RFH FK+G CSCGDYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 159/611 (26%), Positives = 277/611 (45%), Gaps = 95/611 (15%)
Query: 32 AVELLGKALDQYPDIIALKNVHTKLIYLN-SHENPSLGIKLMRAYAACGEPGTARKVFDE 90
A L KA+ D+ K +H + ++ ++ L+ Y CG+ G KVFD
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 91 ISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACS---CSDNL 147
ISERN V +N +I S + + AL FR M++ P ++T V+ ACS + L
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 148 RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGY 207
G Q+H L+ + + N F+ N L++MYGK G L ++ +L RD+V+WN++++
Sbjct: 219 MMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 208 AQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT-----------------NTSSD-- 248
QN + +ALE REM G +PD T++S++PA + N S D
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 249 ---------------NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK 293
VL + +F + + + WN MI Y +N A+ L++ ME+
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 294 SE-VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLE 352
S + ++ T A V+PAC A IH +V ++ L + ++N+L+DMY+R G ++
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKID 457
Query: 353 DAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN-----------SGISPDH 401
A ++F KM+ RD+ +W ++I+ Y + +AL L +MQN + P+
Sbjct: 458 IAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNS 517
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
I + IL +C+ L +GK + + + + LVD+ + G + + V
Sbjct: 518 ITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVFD 576
Query: 462 QMP----------------------------------LEPNERVWGTLLSSCRVYSNMDI 487
Q+P ++PNE + ++ ++C +D
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Query: 488 GLLAADNLLQLSPE-----QSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN 542
GL + P+ S +Y + ++ +AGR KE ++ ++M R K S+
Sbjct: 637 GLRI---FYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP-RDFNKAGAWSS 692
Query: 543 VELNSQVHTFL 553
+ S++H L
Sbjct: 693 LLGASRIHNNL 703
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 209/471 (44%), Gaps = 57/471 (12%)
Query: 54 TKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEIS-----ERNVVFYNVMIRSYVN 108
++L+ + H++P L+RA A V S R+ ++ ++RS V
Sbjct: 19 SQLLPFSRHKHP----YLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVR 74
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN-LF 167
+ +A+L + +M+ G +PDNY +P +LKA + ++ G Q+H + K + +
Sbjct: 75 SNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVT 134
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
V N L+++Y KCG V D + R+ VSWNS+++ +++ ALE R M D
Sbjct: 135 VANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN 194
Query: 228 QKPDAGTMASLMPAVTNTSSDNVLYV---------------------------------- 253
+P + T+ S++ A +N L +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLAS 254
Query: 254 -KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
K + + + LV+WN +++ +N A++ +M VEPD T +SVLPAC
Sbjct: 255 SKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 313 LSALLLGRRIHEY-VERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
L L G+ +H Y ++ L N + ++L+DMY C + ++VFD M R + W +
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNA 374
Query: 372 LISAYGMTGQGCNALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGKV----YFKQ 426
+I+ Y AL LF M+ S G+ + ++ AC SG + K+
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 434
Query: 427 MTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
D R L+D+ R G++D A + +M + + W T+++
Sbjct: 435 GLDRDRFVQNT-----LMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMIT 479
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 490 bits (1262), Expect = e-138, Method: Compositional matrix adjust.
Identities = 275/718 (38%), Positives = 397/718 (55%), Gaps = 86/718 (11%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA + + ++ H + N +G L+ Y+ C ARKVFDE+S +VV
Sbjct: 135 KACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVV 194
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNG-GFRPDNYTYPCVLKACSCSDNLRFGLQLHGA 156
+N +I SY AL +F M N G RPDN T VL C+ G QLH
Sbjct: 195 SWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Query: 157 MLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDA 216
+ + N+FVGN L+ MY KCG + EA V M +DVVSWN+MVAGY+Q RF+DA
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDA 314
Query: 217 -----------------------------------LEVCREMDDLGQKPDAGTMASLMPA 241
L VCR+M G KP+ T+ S++
Sbjct: 315 VRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374
Query: 242 VTNTSSDNVLYVKDIF-------INLEK-------------------------------- 262
+ + +++ K+I I+L K
Sbjct: 375 CASVGA--LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 263 -----KSLVSWNVMITVYMKNSMPGNAIDLYLQM--EKSEVEPDAITCASVLPACGDLSA 315
+ +V+W VMI Y ++ A++L +M E + P+A T + L AC L+A
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 316 LLLGRRIHEYVERKKLRP-NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
L +G++IH Y R + L + N LIDMYA+CG + DA+ VFD M ++ +WTSL++
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
YGM G G AL +F EM+ G D + + +L ACSHSG++++G YF +M + ++
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
P EH+ACLVDLLGRAGR++ A +I++MP+EP VW LS CR++ +++G AA+
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEK 672
Query: 495 LLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLA 554
+ +L+ G Y LLSN+YA AGRWK+VT +RSLM+ + ++K PG S VE TF
Sbjct: 673 ITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFV 732
Query: 555 GDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFAL 614
GD +HP +KEIY+ L + ++K++GYVPET ALHDV++E+K+ L HSEKLA+ + +
Sbjct: 733 GDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGI 792
Query: 615 LNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
L T + + IRITKNLRVCGDCH A +S+I+ +I++RD++RFHHFK+G CSC YW
Sbjct: 793 LTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 159/571 (27%), Positives = 253/571 (44%), Gaps = 90/571 (15%)
Query: 22 SLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEP 81
SL S +P I + K I +K +H KL+ +L L+ Y + G
Sbjct: 21 SLFSTSAPEITPPFIHKC----KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCL 75
Query: 82 GTARKVFDEI--SERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLK 139
A + S+ V +N +IRSY +N N L +F M + + PDNYT+P V K
Sbjct: 76 SHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFK 135
Query: 140 ACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVS 199
AC ++R G H L N+FVGN L++MY +C L +AR V DEM DVVS
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 200 WNSMVAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMP-----------------A 241
WNS++ YA+ + ALE+ M ++ G +PD T+ +++P A
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 242 VTNTSSDNV--------LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAI 285
VT+ N+ +Y K +F N+ K +VSWN M+ Y + +A+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 286 DLYLQMEK-----------------------------------SEVEPDAITCASVLPAC 310
L+ +M++ S ++P+ +T SVL C
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGC 375
Query: 311 GDLSALLLGRRIHEYVERK--KLRPNL-----LLENSLIDMYARCGCLEDAQKVFDKM-- 361
+ AL+ G+ IH Y + LR N ++ N LIDMYA+C ++ A+ +FD +
Sbjct: 376 ASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSP 435
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEM--QNSGISPDHIAFVAILSACSHSGLLEE 419
K RDV +WT +I Y G AL L SEM ++ P+ L AC+ L
Sbjct: 436 KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRI 495
Query: 420 GK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
GK ++ + + P CL+D+ + G + +A V M + NE W +L++
Sbjct: 496 GKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTG 553
Query: 479 CRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
++ + L D + ++ + G +L+
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLV 584
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 489 bits (1259), Expect = e-138, Method: Compositional matrix adjust.
Identities = 261/631 (41%), Positives = 368/631 (58%), Gaps = 35/631 (5%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
YA C + ARKVFD + ER++V +N ++ Y N AL + + M +P T
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
VL A S + G ++HG ++ D + + L+ MY KCG L AR + D M
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP-DAGTMASLMPAV----------- 242
R+VVSWNSM+ Y QN +A+ + ++M D G KP D M +L
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 243 ----------TNTSSDNVL---YVK--------DIFINLEKKSLVSWNVMITVYMKNSMP 281
N S N L Y K +F L+ ++LVSWN MI + +N P
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
+A++ + QM V+PD T SV+ A +LS + IH V R L N+ + +L
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
+DMYA+CG + A+ +FD M R V +W ++I YG G G AL LF EMQ I P+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
+ F++++SACSHSGL+E G F M ++Y I ++H+ +VDLLGRAGR++EA+D I
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 462 QMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKE 521
QMP++P V+G +L +C+++ N++ AA+ L +L+P+ GY+VLL+NIY A W++
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEK 659
Query: 522 VTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGY 581
V +VR M R+ +RKTPG S VE+ ++VH+F +G T+HP SK+IY L L+ +KE GY
Sbjct: 660 VGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGY 719
Query: 582 VPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKL 640
VP+T+ L VE + KE L+ HSEKLAI F LLNT + I + KNLRVC DCH A K
Sbjct: 720 VPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKY 778
Query: 641 ISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
IS + GREIV+RD RFHHFK+G CSCGDYW
Sbjct: 779 ISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 240/523 (45%), Gaps = 74/523 (14%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
KL+ + G A +VF+ I + V Y+ M++ + + AL F M P
Sbjct: 74 KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEP 133
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
Y + +LK C LR G ++HG ++K +LF GL +MY KC + EAR V
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT------ 243
D MP RD+VSWN++VAGY+QN ALE+ + M + KP T+ S++PAV+
Sbjct: 194 DRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLIS 253
Query: 244 ------------------NTSSDNV-LYVK--------DIFINLEKKSLVSWNVMITVYM 276
N S+ V +Y K +F + ++++VSWN MI Y+
Sbjct: 254 VGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYV 313
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
+N P A+ ++ +M V+P ++ L AC DL L GR IH+ L N+
Sbjct: 314 QNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ NSLI MY +C ++ A +F K++ R + SW ++I + G+ +AL FS+M++
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 397 ISPDHIAFVAILSACSHSGLLEE------------------------------GKVYFKQ 426
+ PD +V++++A + + G + +
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 427 MTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYS 483
+ D + + ++D G G A ++ ++M ++PN + +++S+C
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 484 NMDIGL-----LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKE 521
++ GL + + ++LS + G V ++ +AGR E
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMV---DLLGRAGRLNE 593
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 166/334 (49%), Gaps = 36/334 (10%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
++ L+ YA CG TAR++FD + ERNVV +N MI +YV N +A+L+F++M++
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G +P + + L AC+ +L G +H +++ LD N+ V N LISMY KC + A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
+ ++ R +VSWN+M+ G+AQN R DAL +M KPD T S++ A+
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAEL 451
Query: 246 SSDN---------------------------------VLYVKDIFINLEKKSLVSWNVMI 272
S + ++ + IF + ++ + +WN MI
Sbjct: 452 SITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMI 511
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
Y + A++L+ +M+K ++P+ +T SV+ AC + G + Y+ ++
Sbjct: 512 DGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYS 570
Query: 333 PNLLLEN--SLIDMYARCGCLEDAQKVFDKMKFR 364
L +++ +++D+ R G L +A +M +
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK 604
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 40/371 (10%)
Query: 129 PDN-YTYPC--VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
P N Y +P +L+ CS LR Q+ + K L F L+S++ + G + EA
Sbjct: 32 PANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEA 88
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQ------------NMRFDDA----------LEVC--- 220
V + + + V +++M+ G+A+ MR+DD L+VC
Sbjct: 89 ARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDE 148
Query: 221 ------REMDDLGQKPDAGTMASLMPAVTNTSSD--NVLYVKDIFINLEKKSLVSWNVMI 272
+E+ L K M + N + V + +F + ++ LVSWN ++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
Y +N M A+++ M + ++P IT SVLPA L + +G+ IH Y R
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM 392
+ + +L+DMYA+CG LE A+++FD M R+V SW S+I AY A+ +F +M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 393 QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGR 452
+ G+ P ++ + L AC+ G LE G+ + +++ + + + L+ + +
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 453 VDEAYDVIKQM 463
VD A + ++
Sbjct: 388 VDTAASMFGKL 398
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 13/299 (4%)
Query: 19 FQKSLASFQSPVIAVELLGKALDQYPDIIALKN---VHTKLIYLNSHENPSLGIKLMRAY 75
FQK L P V ++G AL D+ L+ +H + L N S+ L+ Y
Sbjct: 325 FQKMLDEGVKPT-DVSVMG-ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 76 AACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYP 135
C E TA +F ++ R +V +N MI + N DAL F +M + +PD +TY
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442
Query: 136 CVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR 195
V+ A + +HG +++ LD N+FV L+ MY KCG ++ AR + D M R
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502
Query: 196 DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT----SSDNVL 251
V +WN+M+ GY + ALE+ EM KP+ T S++ A +++ +
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
Y+ ++E S+ + M+ + + A D +QM V+P ++L AC
Sbjct: 563 YMMKENYSIE-LSMDHYGAMVDLLGRAGRLNEAWDFIMQM---PVKPAVNVYGAMLGAC 617
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/637 (40%), Positives = 381/637 (59%), Gaps = 40/637 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y+ G AR +FDE+ R++ +N MI Y + +AL + NG D
Sbjct: 191 LIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL----TLSNGLRAMD 246
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ T +L AC+ + + G+ +H +K L+ LFV N LI +Y + G L + + V D
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASL------------ 238
M RD++SWNS++ Y N + A+ + +EM +PD T+ SL
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 239 --------------MPAVTNTSSDNVLYVK--------DIFINLEKKSLVSWNVMITVYM 276
+ +T ++ V+Y K +F L ++SWN +I+ Y
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 277 KNSMPGNAIDLYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+N AI++Y ME+ E+ + T SVLPAC AL G ++H + + L ++
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+ SL DMY +CG LEDA +F ++ + W +LI+ +G G G A+ LF EM +
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
G+ PDHI FV +LSACSHSGL++EG+ F+ M DY ITP ++H+ C+VD+ GRAG+++
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET 606
Query: 456 AYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAK 515
A IK M L+P+ +WG LLS+CRV+ N+D+G +A+++L ++ PE GY+VLLSN+YA
Sbjct: 607 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 666
Query: 516 AGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGK 575
AG+W+ V E+RS+ + +RKTPG S++E++++V F G+ +HP +E+Y EL L K
Sbjct: 667 AGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAK 726
Query: 576 MKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNT-HESPIRITKNLRVCGDC 634
+K +GYVP+ L DVE+++KE L HSE+LAI FAL+ T ++ IRI KNLRVCGDC
Sbjct: 727 LKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDC 786
Query: 635 HIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
H K ISKI REI++RD+NRFHHFK+G+CSCGDYW
Sbjct: 787 HSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 242/503 (48%), Gaps = 55/503 (10%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H +L+ +N + KL+ Y G AR FD I R+V +N+MI Y
Sbjct: 71 KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRA 130
Query: 110 RWYNDALLVFR-EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
++ + F M++ G PD T+P VLKAC + G ++H LK W+++V
Sbjct: 131 GNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYV 187
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
LI +Y + + AR + DEMP RD+ SWN+M++GY Q+ +AL + + +
Sbjct: 188 AASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-- 245
Query: 229 KPDAGTMASLMPAVTNTSSDN----------------VLYVKDIFINLEK---------- 262
D+ T+ SL+ A T N L+V + I+L
Sbjct: 246 --DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 263 -------KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT---CASVLPACGD 312
+ L+SWN +I Y N P AI L+ +M S ++PD +T AS+L GD
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 313 LSALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
+ A R + + RK ++ + N+++ MYA+ G ++ A+ VF+ + DV SW +
Sbjct: 364 IRAC---RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 372 LISAYGMTGQGCNALALFSEMQNSG-ISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTD 429
+IS Y G A+ +++ M+ G I+ + +V++L ACS +G L +G K++ + + +
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
+ + L D+ G+ GR+++A + Q+P N W TL++ + + + +
Sbjct: 481 GLYLDVFV--VTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAV 537
Query: 490 LAADNLLQ--LSPEQSGYYVLLS 510
+ +L + P+ + LLS
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLS 560
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 159/366 (43%), Gaps = 42/366 (11%)
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
NL+ LH ++ + N+ + L+++Y G + AR+ D + RDV +WN M++
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 206 GYAQNMRFDDALEVCR----EMDDLGQKPDAGTMASLMPAVTNTSSDNVLY--------- 252
GY R ++ EV R M G PD T S++ A N ++
Sbjct: 126 GYG---RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM 182
Query: 253 ---------------------VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM 291
+ +F + + + SWN MI+ Y ++ GNA + L +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS---GNAKEA-LTL 238
Query: 292 EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCL 351
D++T S+L AC + G IH Y + L L + N LID+YA G L
Sbjct: 239 SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 352 EDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC 411
D QKVFD+M RD+ SW S+I AY + Q A++LF EM+ S I PD + +++ S
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 412 SHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERV 471
S G + + I +V + + G VD A V +P +
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVIS 417
Query: 472 WGTLLS 477
W T++S
Sbjct: 418 WNTIIS 423
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/629 (40%), Positives = 374/629 (59%), Gaps = 44/629 (6%)
Query: 87 VFDEISERNVVF-YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSD 145
+F+ ++ VF +N +I + +ALL F M P ++PC +KACS
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
++ G Q H ++FV + LI MY CG L +AR V DE+P+R++VSW SM+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 206 GYAQNMRFDDALEVCREM------DDLGQKPDAGTMASLMPA------------------ 241
GY N DA+ + +++ DD D+ + S++ A
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 242 ---------VTNTSSD--------NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNA 284
V NT D V + IF + K VS+N +++VY ++ M A
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 285 IDLYLQMEKSEVEP-DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
+++ ++ K++V +AIT ++VL A AL +G+ IH+ V R L ++++ S+ID
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
MY +CG +E A+K FD+MK ++V SWT++I+ YGM G AL LF M +SG+ P++I
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
FV++L+ACSH+GL EG +F M + + P +EH+ C+VDLLGRAG + +AYD+I++M
Sbjct: 391 FVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 464 PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVT 523
++P+ +W +LL++CR++ N+++ ++ L +L GYY+LLS+IYA AGRWK+V
Sbjct: 451 KMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVE 510
Query: 524 EVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVP 583
VR +MK R + K PG S +ELN +VH FL GD HPQ ++IYE L L K+ E GYV
Sbjct: 511 RVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Query: 584 ETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNT-HESPIRITKNLRVCGDCHIAAKLIS 642
T S HDV+EE+KE L VHSEKLAI F ++NT S + + KNLRVC DCH KLIS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630
Query: 643 KIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
KIV RE V+RD RFHHFKDG CSCGDYW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 176/382 (46%), Gaps = 44/382 (11%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA DI + K H + + + L+ Y+ CG+ ARKVFDEI +RN+V
Sbjct: 84 KACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIV 143
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMV------NGGFRPDNYTYPCVLKACSCSDNLRFGL 151
+ MIR Y N DA+ +F++++ + D+ V+ ACS
Sbjct: 144 SWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTE 203
Query: 152 QLHGAMLKVRLDWNLFVGNGLISMYGKC--GCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
+H ++K D + VGN L+ Y K G + AR + D++ +D VS+NS+++ YAQ
Sbjct: 204 SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ 263
Query: 210 NMRFDDALEVCREM-DDLGQKPDAGTMASLMPAVTNTSS-----------------DNVL 251
+ ++A EV R + + +A T+++++ AV+++ + D+V+
Sbjct: 264 SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 252 YVKDI----------------FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
I F ++ K++ SW MI Y + A++L+ M S
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVE-RKKLRPNLLLENSLIDMYARCGCLEDA 354
V P+ IT SVL AC + G R ++ R + P L ++D+ R G L+ A
Sbjct: 384 VRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 355 QKVFDKMKFR-DVASWTSLISA 375
+ +MK + D W+SL++A
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAA 465
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 259/658 (39%), Positives = 391/658 (59%), Gaps = 73/658 (11%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A VF I E N++ +N M R + + AL ++ M++ G P++YT+P VLK+C+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD------------- 190
S + G Q+HG +LK+ D +L+V LISMY + G L +A V D
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 191 ------------------EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDA 232
E+P +DVVSWN+M++GYA+ + +ALE+ ++M +PD
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 233 GTMASLMPAVTNTSSDNV-----LYVKD----------------------------IFIN 259
TM +++ A + S + L++ D +F
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 260 LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
L K ++SWN +I Y ++ A+ L+ +M +S P+ +T S+LPAC L A+ +G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 320 RRIHEYVER--KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
R IH Y+++ K + L SLIDMYA+CG +E A +VF+ + + ++SW ++I +
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 446
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRI 437
M G+ + LFS M+ GI PD I FV +LSACSHSG+L+ G+ F+ MT DY++TP++
Sbjct: 447 MHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Query: 438 EHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ 497
EH+ C++DLLG +G EA ++I M +EP+ +W +LL +C+++ N+++G A+NL++
Sbjct: 507 EHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIK 566
Query: 498 LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDT 557
+ PE G YVLLSNIYA AGRW EV + R+L+ + ++K PG S++E++S VH F+ GD
Sbjct: 567 IEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDK 626
Query: 558 SHPQSKEIY---EELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFAL 614
HP+++EIY EE+ VL+ K G+VP+T L ++EEE KEG L HSEKLAI F L
Sbjct: 627 FHPRNREIYGMLEEMEVLLEKA---GFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 683
Query: 615 LNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
++T + + I KNLRVC +CH A KLISKI REI+ RD RFHHF+DG+CSC DYW
Sbjct: 684 ISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 171/348 (49%), Gaps = 37/348 (10%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L++ YA+ G A+K+FDEI ++VV +N MI Y Y +AL +F++M+ RPD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T V+ AC+ S ++ G Q+H + NL + N LI +Y KCG L A + +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--------- 241
+P +DV+SWN+++ GY + +AL + +EM G+ P+ TM S++PA
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 242 --------------VTNTSSDNV----LYVK--------DIFINLEKKSLVSWNVMITVY 275
VTN SS +Y K +F ++ KSL SWN MI +
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK-KLRPN 334
+ + DL+ +M K ++PD IT +L AC L LGR I + + K+ P
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 505
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLISAYGMTGQ 381
L +ID+ G ++A+++ + M+ D W SL+ A M G
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 143/312 (45%), Gaps = 47/312 (15%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
Y +F +++ +L+ WN M + +S P +A+ LY+ M + P++ T VL +C
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR------- 364
A G++IH +V + +L + SLI MY + G LEDA KVFDK R
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 365 ------------------------DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
DV SW ++IS Y TG AL LF +M + + PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI 460
V ++SAC+ SG +E G+ DD+ ++ L+DL + G ++ A +
Sbjct: 266 ESTMVTVVSACAQSGSIELGR-QVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 461 KQMPLEPNERVWGTLLSSCRVYSNMDI---GLLAADNLLQLSPEQSGYYVLLSNIYAKA- 516
+++P + + W TL+ Y++M++ LL +L+ S E +LS + A A
Sbjct: 325 ERLPYK-DVISWNTLIGG---YTHMNLYKEALLLFQEMLR-SGETPNDVTMLSILPACAH 379
Query: 517 ------GRWKEV 522
GRW V
Sbjct: 380 LGAIDIGRWIHV 391
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/673 (38%), Positives = 384/673 (57%), Gaps = 39/673 (5%)
Query: 36 LGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERN 95
+ K+ + + +H ++ E S+G L+ Y +ARKVFDE++ER+
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 96 VVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHG 155
V+ +N +I YV+N L VF +M+ G D T V C+ S + G +H
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 156 AMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDD 215
+K N L+ MY KCG L A+ V EM R VVS+ SM+AGYA+ +
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 216 ALEVCREMDDLGQKPDAGTMASLMPA---------------------------VTNTSSD 248
A+++ EM++ G PD T+ +++ V+N D
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 249 NVLYVKD--------IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY-LQMEKSEVEPD 299
+Y K +F + K ++SWN +I Y KN A+ L+ L +E+ PD
Sbjct: 441 --MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPD 498
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD 359
T A VLPAC LSA GR IH Y+ R + + NSL+DMYA+CG L A +FD
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFD 558
Query: 360 KMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE 419
+ +D+ SWT +I+ YGM G G A+ALF++M+ +GI D I+FV++L ACSHSGL++E
Sbjct: 559 DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 420 GKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
G +F M + +I P +EH+AC+VD+L R G + +AY I+ MP+ P+ +WG LL C
Sbjct: 619 GWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 678
Query: 480 RVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPG 539
R++ ++ + A+ + +L PE +GYYVL++NIYA+A +W++V +R + +R +RK PG
Sbjct: 679 RIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPG 738
Query: 540 ISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEG 599
S +E+ +V+ F+AGD+S+P+++ I L + +M E GY P T AL D EE +KE
Sbjct: 739 CSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEE 798
Query: 600 HLAVHSEKLAIVFALLNT-HESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFH 658
L HSEKLA+ ++++ H IR+TKNLRVCGDCH AK +SK+ REIV+RD+NRFH
Sbjct: 799 ALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFH 858
Query: 659 HFKDGLCSCGDYW 671
FKDG CSC +W
Sbjct: 859 QFKDGHCSCRGFW 871
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 209/423 (49%), Gaps = 37/423 (8%)
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
+ +LG KL Y CG+ A +VFDE+ +F+N+++ + ++ ++ +F++M+
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
+ G D+YT+ CV K+ S ++ G QLHG +LK VGN L++ Y K +
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
AR V DEM RDV+SWNS++ GY N + L V +M G + D T+ S+
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 244 N---------------------------------TSSDNVLYVKDIFINLEKKSLVSWNV 270
+ + ++ K +F + +S+VS+
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
MI Y + + G A+ L+ +ME+ + PD T +VL C L G+R+HE+++
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFS 390
L ++ + N+L+DMYA+CG +++A+ VF +M+ +D+ SW ++I Y AL+LF+
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 391 -EMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA-CLVDLLG 448
++ SPD +L AC+ ++G+ + + + R H A LVD+
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYA 545
Query: 449 RAG 451
+ G
Sbjct: 546 KCG 548
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
+S+ N + + ++ NA+ L K +++P T SVL C D +L G+ +
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
++ + L + L MY CG L++A +VFD++K W L++ +G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 383 CNALALFSEMQNSGISPDHIAFVAI 407
++ LF +M +SG+ D F +
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCV 201
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 241/661 (36%), Positives = 383/661 (57%), Gaps = 37/661 (5%)
Query: 48 ALKNVHTKLIYLNSHENPSLGIK--LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRS 105
A+ VH + L NP L + L+++Y A +F+EI E++ V +N +I
Sbjct: 165 AVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 106 YVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN 165
Y + Y +++ +F +M G +P ++T+ VLKA + G QLH + +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
VGN ++ Y K +LE R + DEMP D VS+N +++ Y+Q +++ +L REM
Sbjct: 285 ASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQC 344
Query: 226 LGQKPDAGTMASLMPAVTNTSS----------------DNVLYVKD-------------- 255
+G A+++ N SS D++L+V +
Sbjct: 345 MGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEE 404
Query: 256 ---IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
IF +L +++ VSW +I+ Y++ + G + L+ +M S + D T A+VL A
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
++LLLG+++H ++ R N+ + L+DMYA+CG ++DA +VF++M R+ SW +L
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNAL 524
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
ISA+ G G A+ F++M SG+ PD ++ + +L+ACSH G +E+G YF+ M+ Y
Sbjct: 525 ISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAA 492
ITP+ +H+AC++DLLGR GR EA ++ +MP EP+E +W ++L++CR++ N + AA
Sbjct: 585 ITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAA 644
Query: 493 DNLLQLSP-EQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHT 551
+ L + + YV +SNIYA AG W++V +V+ M+ R I+K P S VE+N ++H
Sbjct: 645 EKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHV 704
Query: 552 FLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIV 611
F + D +HP EI ++ L +++ GY P+T S + DV+E+ K L HSE+LA+
Sbjct: 705 FSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVA 764
Query: 612 FALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDY 670
FAL++T E PI + KNLR C DCH A KLISKIV REI +RDT+RFHHF +G+CSCGDY
Sbjct: 765 FALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDY 824
Query: 671 W 671
W
Sbjct: 825 W 825
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 208/454 (45%), Gaps = 39/454 (8%)
Query: 62 HENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFRE 121
H+N ++ + G+ +AR +FD + +R VV + +++ Y N +++A +FR+
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQ 135
Query: 122 MVNGG--FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF--VGNGLISMYG 177
M PD+ T+ +L C+ + Q+H +K+ D N F V N L+ Y
Sbjct: 136 MCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYC 195
Query: 178 KCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMAS 237
+ L A + +E+P +D V++N+++ GY ++ + +++ + +M G +P T +
Sbjct: 196 EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 238 LMPAVTN---------------------------------TSSDNVLYVKDIFINLEKKS 264
++ AV + D VL + +F + +
Sbjct: 256 VLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELD 315
Query: 265 LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE 324
VS+NV+I+ Y + ++ + +M+ + A++L +LS+L +GR++H
Sbjct: 316 FVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC 375
Query: 325 YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCN 384
L + NSL+DMYA+C E+A+ +F + R SWT+LIS Y G
Sbjct: 376 QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGA 435
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
L LF++M+ S + D F +L A + L GK + + + + LV
Sbjct: 436 GLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL-ENVFSGSGLV 494
Query: 445 DLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
D+ + G + +A V ++MP + N W L+S+
Sbjct: 495 DMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA 527
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 168/376 (44%), Gaps = 41/376 (10%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA+ D + +H + + S+G +++ Y+ R +FDE+ E + V
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
YNV+I SY Y +L FREM GF N+ + +L + +L+ G QLH
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
L D L VGN L+ MY KC EA + +P+R VSW ++++GY Q L
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 218 EVCREMDDLGQKPDAGTMASLMPAVTNTSS-----------------DNV--------LY 252
++ +M + D T A+++ A + +S +NV +Y
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 253 VK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCA 304
K +F + ++ VSWN +I+ + N AI + +M +S ++PD+++
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 305 SVLPACGDLSALLLGRRIHEYVERKK----LRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
VL AC + G EY + + P ++D+ R G +A+K+ D+
Sbjct: 558 GVLTACSHCGFVEQGT---EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 361 MKFR-DVASWTSLISA 375
M F D W+S+++A
Sbjct: 615 MPFEPDEIMWSSVLNA 630
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 112/258 (43%), Gaps = 41/258 (15%)
Query: 157 MLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDA 216
++K D + N ++ + G + AR V DEMP ++ VS N+M++G+ +
Sbjct: 39 IIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK------- 91
Query: 217 LEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYM 276
+ +V +D+F + +++V+W +++ Y
Sbjct: 92 ------------------------------TGDVSSARDLFDAMPDRTVVTWTILMGWYA 121
Query: 277 KNSMPGNAIDLYLQMEKSE--VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL--R 332
+NS A L+ QM +S PD +T ++LP C D ++H + +
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM 392
P L + N L+ Y L+ A +F+++ +D ++ +LI+ Y G ++ LF +M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 393 QNSGISPDHIAFVAILSA 410
+ SG P F +L A
Sbjct: 242 RQSGHQPSDFTFSGVLKA 259
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/657 (37%), Positives = 375/657 (57%), Gaps = 60/657 (9%)
Query: 36 LGKALDQYPDIIALKNV------------HTKLIYLNSHENPSLGIKLMRAYAACGEPGT 83
+G LDQ+ + LK V H + + +P + M YA+CG
Sbjct: 105 VGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINY 164
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
AR VFDE+S R+VV +N MI Y ++A +F EM + PD ++ AC
Sbjct: 165 ARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGR 224
Query: 144 SDNLRFGLQLHGAMLK--VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWN 201
+ N+R+ ++ +++ VR+D +L L++MY GC+ AR +M R++
Sbjct: 225 TGNMRYNRAIYEFLIENDVRMDTHLL--TALVTMYAGAGCMDMAREFFRKMSVRNLFVST 282
Query: 202 SMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE 261
+MV+GY++ R DDA + IF E
Sbjct: 283 AMVSGYSKCGRLDDA-------------------------------------QVIFDQTE 305
Query: 262 KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRR 321
KK LV W MI+ Y+++ P A+ ++ +M S ++PD ++ SV+ AC +L L +
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKW 365
Query: 322 IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQ 381
+H + L L + N+LI+MYA+CG L+ + VF+KM R+V SW+S+I+A M G+
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 382 GCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA 441
+AL+LF+ M+ + P+ + FV +L CSHSGL+EEGK F MTD+Y ITP++EH+
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYG 485
Query: 442 CLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPE 501
C+VDL GRA + EA +VI+ MP+ N +WG+L+S+CR++ +++G AA +L+L P+
Sbjct: 486 CMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPD 545
Query: 502 QSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQ 561
G VL+SNIYA+ RW++V +R +M+ + + K G+S ++ N + H FL GD H Q
Sbjct: 546 HDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQ 605
Query: 562 SKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHESP 621
S EIY +L +V K+K GYVP+ S L DVEEE+K+ + HSEKLA+ F L+N +
Sbjct: 606 SNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEE 665
Query: 622 -------IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
IRI KNLRVC DCH+ KL+SK+ REI++RD RFH +K+GLCSC DYW
Sbjct: 666 EKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/606 (38%), Positives = 373/606 (61%), Gaps = 44/606 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y +CG+ +A KVF I E++VV +N MI +V + AL +F++M + +
Sbjct: 172 LIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKAS 231
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ T VL AC+ NL FG Q+ + + R++ NL + N ++ MY KCG + +A+ + D
Sbjct: 232 HVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFD 291
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
M +D V+W +M+ GYA + ++ A EV M
Sbjct: 292 AMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP-------------------------- 325
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY--LQMEKSEVEPDAITCASVLP 308
+K +V+WN +I+ Y +N P A+ ++ LQ++K+ ++ + IT S L
Sbjct: 326 -----------QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN-MKLNQITLVSTLS 373
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
AC + AL LGR IH Y+++ +R N + ++LI MY++CG LE +++VF+ ++ RDV
Sbjct: 374 ACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFV 433
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
W+++I M G G A+ +F +MQ + + P+ + F + ACSH+GL++E + F QM
Sbjct: 434 WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG 488
+Y I P +H+AC+VD+LGR+G +++A I+ MP+ P+ VWG LL +C++++N+++
Sbjct: 494 SNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA 553
Query: 489 LLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQ 548
+A LL+L P G +VLLSNIYAK G+W+ V+E+R M+ ++K PG S++E++
Sbjct: 554 EMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGM 613
Query: 549 VHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEED-KEGHLAVHSEK 607
+H FL+GD +HP S+++Y +L+ ++ K+K GY PE L +EEE+ KE L +HSEK
Sbjct: 614 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEK 673
Query: 608 LAIVFALLNTHESP--IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLC 665
LAI + L++T E+P IR+ KNLRVCGDCH AKLIS++ REI++RD RFHHF++G C
Sbjct: 674 LAICYGLIST-EAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Query: 666 SCGDYW 671
SC D+W
Sbjct: 733 SCNDFW 738
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 191/429 (44%), Gaps = 27/429 (6%)
Query: 227 GQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
G D + + L +S ++ Y + +F + K + +WN +I Y P +I
Sbjct: 57 GTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIW 116
Query: 287 LYLQM-EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
+L M +S+ P+ T ++ A ++S+L LG+ +H + + ++ + NSLI Y
Sbjct: 117 AFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCY 176
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
CG L+ A KVF +K +DV SW S+I+ + G AL LF +M++ + H+ V
Sbjct: 177 FSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMV 236
Query: 406 AILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPL 465
+LSAC+ LE G+ + ++ R+ + ++D+ + G +++A + M
Sbjct: 237 GVLSACAKIRNLEFGRQVCSYIEEN-RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME- 294
Query: 466 EPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQS--GYYVLLSNIYAKAGRWKE-- 521
E + W T+L + + + AA +L P++ + L+S Y + G+ E
Sbjct: 295 EKDNVTWTTMLDGYAISEDYE----AAREVLNSMPQKDIVAWNALIS-AYEQNGKPNEAL 349
Query: 522 -VTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKE--IYEELYV---LVGK 575
V L K ++ + +S + +QV G H K+ I +V L+
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 576 MKELGYVPETDSALHDVEEED------KEGHLAVH---SEKLAIVFALLNTHESPIRITK 626
+ G + ++ + VE+ D G LA+H +E + + + + + P +T
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 627 NLRVCGDCH 635
C H
Sbjct: 470 TNVFCACSH 478
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 237/610 (38%), Positives = 365/610 (59%), Gaps = 44/610 (7%)
Query: 65 PSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN 124
P L +KL RAYA+ G+ + +F + + ++ + I + N + A L++ ++++
Sbjct: 64 PVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLE 184
P+ +T+ +LK+CS + G +H +LK L + +V GL+ +Y K G ++
Sbjct: 124 SEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVS 179
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
A+ V D MP R +VS +M+ YA+
Sbjct: 180 AQKVFDRMPERSLVSSTAMITCYAKQ---------------------------------- 205
Query: 245 TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITC 303
NV + +F ++ ++ +VSWNVMI Y ++ P +A+ L+ ++ + + +PD IT
Sbjct: 206 ---GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
+ L AC + AL GR IH +V+ ++R N+ + LIDMY++CG LE+A VF+
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQN-SGISPDHIAFVAILSACSHSGLLEEGKV 422
+D+ +W ++I+ Y M G +AL LF+EMQ +G+ P I F+ L AC+H+GL+ EG
Sbjct: 323 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIR 382
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
F+ M +Y I P+IEH+ CLV LLGRAG++ AY+ IK M ++ + +W ++L SC+++
Sbjct: 383 IFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLH 442
Query: 483 SNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN 542
+ +G A+ L+ L+ + SG YVLLSNIYA G ++ V +VR+LMK + I K PGIS
Sbjct: 443 GDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGIST 502
Query: 543 VELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLA 602
+E+ ++VH F AGD H +SKEIY L + ++K GYVP T++ L D+EE +KE L
Sbjct: 503 IEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQ 562
Query: 603 VHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFK 661
VHSE+LAI + L++T SP++I KNLRVC DCH KLISKI GR+IV+RD NRFHHF
Sbjct: 563 VHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFT 622
Query: 662 DGLCSCGDYW 671
DG CSCGD+W
Sbjct: 623 DGSCSCGDFW 632
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 462 bits (1189), Expect = e-130, Method: Compositional matrix adjust.
Identities = 239/657 (36%), Positives = 365/657 (55%), Gaps = 34/657 (5%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
LK +H LI + H + L L++ + + +F N+ YN +I +VN
Sbjct: 29 LKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
N +++ L +F + G +T+P VLKAC+ + + + G+ LH ++K + ++
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
L+S+Y G L +A + DE+P R VV+W ++ +GY + R +A+++ ++M ++G
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 229 KPDAGTMASLMPAVTNTSSDNV-------------------------LYVK--------D 255
KPD+ + ++ A + + LY K
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+F ++ +K +V+W+ MI Y NS P I+L+LQM + ++PD + L +C L A
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L LG ++R + NL + N+LIDMYA+CG + +VF +MK +D+ + IS
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
G + A+F + + GISPD F+ +L C H+GL+++G +F ++ Y +
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
+EH+ C+VDL GRAG +D+AY +I MP+ PN VWG LLS CR+ + + L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
+ L P +G YV LSNIY+ GRW E EVR +M ++ ++K PG S +EL +VH FLA
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLAD 568
Query: 556 DTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALL 615
D SHP S +IY +L L +M+ +G+VP T+ DVEEE+KE L HSEKLA+ L+
Sbjct: 569 DKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLI 628
Query: 616 NT-HESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+T H IR+ KNLRVCGDCH KLISKI REIV+RD NRFH F +G CSC DYW
Sbjct: 629 STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 461 bits (1186), Expect = e-130, Method: Compositional matrix adjust.
Identities = 241/644 (37%), Positives = 364/644 (56%), Gaps = 76/644 (11%)
Query: 66 SLGIKLMRAYAACGEP----GTARKVFDEISERN-------------------------- 95
S+ L+ Y+ C +ARKVFDEI E++
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 96 ------VVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRF 149
+V YN MI YVN +Y +AL + R MV+ G D +TYP V++AC+ + L+
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 150 GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
G Q+H +L+ R D++ N L+S+Y KCG EAR + ++MP +D+VSWN++++GY
Sbjct: 305 GKQVHAYVLR-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGY-- 361
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWN 269
SS ++ K IF +++K+++SW
Sbjct: 362 -----------------------------------VSSGHIGEAKLIFKEMKEKNILSWM 386
Query: 270 VMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
+MI+ +N + L+ M++ EP + + +C L A G++ H + +
Sbjct: 387 IMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI 446
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
+L N+LI MYA+CG +E+A++VF M D SW +LI+A G G G A+ ++
Sbjct: 447 GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVY 506
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
EM GI PD I + +L+ACSH+GL+++G+ YF M YRI P +H+A L+DLL R
Sbjct: 507 EEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCR 566
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
+G+ +A VI+ +P +P +W LLS CRV+ NM++G++AAD L L PE G Y+LL
Sbjct: 567 SGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLL 626
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
SN++A G+W+EV VR LM+ R ++K S +E+ +QVHTFL DTSHP+++ +Y L
Sbjct: 627 SNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYL 686
Query: 570 YVLVGKMKELGYVPETDSALHDVEEED-KEGHLAVHSEKLAIVFALLNTHE-SPIRITKN 627
L +M+ LGYVP+T LHDVE + KE L HSEK+A+ F L+ + IRI KN
Sbjct: 687 QDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKN 746
Query: 628 LRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
LR CGDCH + +S +V R+I++RD RFHHF++G CSCG++W
Sbjct: 747 LRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 228/508 (44%), Gaps = 93/508 (18%)
Query: 71 LMRAYAACGEPGTARKVFDE--ISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFR 128
++ Y A G+ AR VF++ + R+ V YN MI + +N A+ +F +M + GF+
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 129 PDNYTYPCVLKACS-CSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGC----LL 183
PDN+T+ VL + +D+ + +Q H A LK + V N L+S+Y KC L
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
AR V DE+ +D SW +M+ GY +N FD E+ MDD
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDD------------------ 247
Query: 244 NTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
LV++N MI+ Y+ A+++ +M S +E D T
Sbjct: 248 ------------------NMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
SV+ AC L LG+++H YV R++ + +NSL+ +Y +CG ++A+ +F+KM
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
+D+ SW +L+S Y +G A +F EM+ I ++++ ++S + +G EEG
Sbjct: 349 KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEG--- 401
Query: 424 FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYS 483
++ F+C+ K+ EP + + + SC V
Sbjct: 402 -------------LKLFSCM-----------------KREGFEPCDYAFSGAIKSCAVLG 431
Query: 484 NMDIGLLAADNLLQLSPEQS-GYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN 542
G LL++ + S L +YAK G +E +V R P + +
Sbjct: 432 AYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV--------FRTMPCLDS 483
Query: 543 VELNSQVHTFLAGDTSH-PQSKEIYEEL 569
V N+ + G H ++ ++YEE+
Sbjct: 484 VSWNALIAAL--GQHGHGAEAVDVYEEM 509
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 154/381 (40%), Gaps = 99/381 (25%)
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
+L+ +HG ++ + N LI +Y K L AR + DE+ D ++ +MV+
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 206 GYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK--- 262
GY +S ++ + +F EK
Sbjct: 89 GYC-------------------------------------ASGDITLARGVF---EKAPV 108
Query: 263 --KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGR 320
+ V +N MIT + N+ +AI+L+ +M+ +PD T ASVL AL+
Sbjct: 109 CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGL----ALVADD 164
Query: 321 -----RIHEYVERKKLRPNLLLENSLIDMYARCGC----LEDAQKVFDKMKFRDVASWTS 371
+ H + + N+L+ +Y++C L A+KVFD++ +D SWT+
Sbjct: 165 EKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTT 224
Query: 372 LISAY------------------------------GMTGQGC--NALALFSEMQNSGISP 399
+++ Y G +G AL + M +SGI
Sbjct: 225 MMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQM--TDDYRITPRIEHF-ACLVDLLGRAGRVDEA 456
D + +++ AC+ +GLL+ GK + +D+ HF LV L + G+ DEA
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEA 339
Query: 457 YDVIKQMPLEPNERVWGTLLS 477
+ ++MP + + W LLS
Sbjct: 340 RAIFEKMPAK-DLVSWNALLS 359
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 2/159 (1%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ H +L+ + + S G L+ YA CG AR+VF + + V +N +I + +
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKV-RLDWNLFV 168
+A+ V+ EM+ G RPD T VL ACS + + G + +M V R+
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADH 556
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVS-WNSMVAG 206
LI + + G +A V++ +P + W ++++G
Sbjct: 557 YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMK--FRDVASWTSLISAYGMTGQGCNALALFS 390
P+ + +++ Y G + A+ VF+K RD + ++I+ + G +A+ LF
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 391 EMQNSGISPDHIAFVAILSACS------------HSGLLEEGKVYFKQMTDDYRITPRIE 438
+M++ G PD+ F ++L+ + H+ L+ G Y +++ +
Sbjct: 138 KMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSN--ALVSVYS 195
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG---LLAADNL 495
A LL A +V +D I LE +ER W T+++ D+G L D+
Sbjct: 196 KCASSPSLLHSARKV---FDEI----LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN 248
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTE-VRSLMKR----------RRIRKTPGISNVE 544
++L Y ++S Y G ++E E VR ++ IR ++
Sbjct: 249 MKL----VAYNAMISG-YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQ 303
Query: 545 LNSQVHTFL 553
L QVH ++
Sbjct: 304 LGKQVHAYV 312
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 234/590 (39%), Positives = 346/590 (58%), Gaps = 39/590 (6%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A+ VFD + +N+MIR + + +LL+++ M+ + YT+P +LKACS
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
Q+H + K+ + +++ N LI+ Y G A + D +P D VSWNS+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
+ GY + + D AL + R+M + K
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAE-------------------------------------K 210
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
+ +SW MI+ Y++ M A+ L+ +M+ S+VEPD ++ A+ L AC L AL G+ IH
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
Y+ + ++R + +L LIDMYA+CG +E+A +VF +K + V +WT+LIS Y G G
Sbjct: 271 SYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGR 330
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACL 443
A++ F EMQ GI P+ I F A+L+ACS++GL+EEGK+ F M DY + P IEH+ C+
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Query: 444 VDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQS 503
VDLLGRAG +DEA I++MPL+PN +WG LL +CR++ N+++G + L+ + P
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450
Query: 504 GYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSK 563
G YV +NI+A +W + E R LMK + + K PG S + L H FLAGD SHP+ +
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 510
Query: 564 EIYEELYVLVGKMKELGYVPETDSALHD-VEEEDKEGHLAVHSEKLAIVFALLNTHESP- 621
+I + ++ K++E GYVPE + L D V+++++E + HSEKLAI + L+ T
Sbjct: 511 KIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTI 570
Query: 622 IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
IRI KNLRVC DCH KLISKI R+IV+RD RFHHF+DG CSCGDYW
Sbjct: 571 IRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 33/267 (12%)
Query: 242 VTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAI 301
+++TSSD + Y + +F ++ WN+MI + + P ++ LY +M S +A
Sbjct: 57 ISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAY 116
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD-- 359
T S+L AC +LSA +IH + + ++ NSLI+ YA G + A +FD
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 360 -----------------------------KMKFRDVASWTSLISAYGMTGQGCNALALFS 390
KM ++ SWT++IS Y AL LF
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 391 EMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA 450
EMQNS + PD+++ LSAC+ G LE+GK + + RI L+D+ +
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGK-WIHSYLNKTRIRMDSVLGCVLIDMYAKC 295
Query: 451 GRVDEAYDVIKQMPLEPNERVWGTLLS 477
G ++EA +V K + + + + W L+S
Sbjct: 296 GEMEEALEVFKNIK-KKSVQAWTALIS 321
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 10/259 (3%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
+++ Y G+ A +F +++E+N + + MI YV +AL +F EM N PD
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
N + L AC+ L G +H + K R+ + +G LI MY KCG + EA V
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
+ ++ V +W ++++GYA + +A+ EM +G KP+ T +++ A + T V
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL--V 364
Query: 251 LYVKDIFINLE-----KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
K IF ++E K ++ + ++ + + + A +M ++P+A+ +
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM---PLKPNAVIWGA 421
Query: 306 VLPACGDLSALLLGRRIHE 324
+L AC + LG I E
Sbjct: 422 LLKACRIHKNIELGEEIGE 440
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H+ L + LG L+ YA CGE A +VF I +++V + +I Y +
Sbjct: 267 KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYH 326
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+A+ F EM G +P+ T+ VL ACS + + G + +M + D+NL
Sbjct: 327 GHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER---DYNLKPT 383
Query: 170 ----NGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMV 204
++ + G+ G L EA+ + EMP + + V W +++
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/637 (37%), Positives = 370/637 (58%), Gaps = 69/637 (10%)
Query: 71 LMRAYAACGEPGTARKVFDEISER-----------------------------------N 95
+ Y CG G ARKVFD +S++ N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 96 VVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHG 155
+V +N ++ + + ++ +A+++F+++ + GF PD T VL + S+ L G +HG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 156 AMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDD 215
++K L + V + +I MYGK G + + ++ + N+ + G ++N D
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 216 ALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVY 275
ALE+ + T NV VSW +I
Sbjct: 337 ALEMFELFKE------------------QTMELNV---------------VSWTSIIAGC 363
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+N A++L+ +M+ + V+P+ +T S+LPACG+++AL GR H + R L N+
Sbjct: 364 AQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV 423
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+ ++LIDMYA+CG + +Q VF+ M +++ W SL++ + M G+ +++F + +
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
+ PD I+F ++LSAC GL +EG YFK M+++Y I PR+EH++C+V+LLGRAG++ E
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 456 AYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAK 515
AYD+IK+MP EP+ VWG LL+SCR+ +N+D+ +AA+ L L PE G YVLLSNIYA
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAA 603
Query: 516 AGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGK 575
G W EV +R+ M+ ++K PG S +++ ++V+T LAGD SHPQ +I E++ + +
Sbjct: 604 KGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKE 663
Query: 576 MKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDC 634
M++ G+ P D ALHDVEE+++E L HSEKLA+VF LLNT + +P+++ KNLR+CGDC
Sbjct: 664 MRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 635 HIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
H K IS GREI IRDTNRFHHFKDG+CSCGD+W
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 106/201 (52%), Gaps = 2/201 (0%)
Query: 227 GQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
G + D A L+ + +N + N + + ++ ++ S++ +I K + +I
Sbjct: 45 GAQNDGYISAKLIASYSNYNCFNDADL--VLQSIPDPTIYSFSSLIYALTKAKLFTQSIG 102
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYA 346
++ +M + PD+ ++ C +LSA +G++IH L + ++ S+ MY
Sbjct: 103 VFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYM 162
Query: 347 RCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVA 406
RCG + DA+KVFD+M +DV + ++L+ AY G + + SEM++SGI + +++
Sbjct: 163 RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 407 ILSACSHSGLLEEGKVYFKQM 427
ILS + SG +E V F+++
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKI 243
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/645 (39%), Positives = 376/645 (58%), Gaps = 40/645 (6%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+G L+ YA CG AR+VF +++++ V +N MI N + +A+ ++ M
Sbjct: 351 IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHD 410
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
P ++T L +C+ + G Q+HG LK+ +D N+ V N L+++Y + G L E R
Sbjct: 411 ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECR 470
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVC-REMDDLGQKPDAGTMASLMP----- 240
+ MP D VSWNS++ A++ R VC GQK + T +S++
Sbjct: 471 KIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSL 530
Query: 241 ------------AVTN-----TSSDNVLYV-----------KDIFINL-EKKSLVSWNVM 271
A+ N +++N L + IF + E++ V+WN M
Sbjct: 531 SFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSM 590
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
I+ Y+ N + A+DL M ++ D+ A+VL A ++ L G +H R L
Sbjct: 591 ISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACL 650
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
++++ ++L+DMY++CG L+ A + F+ M R+ SW S+IS Y GQG AL LF
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 392 MQNSGISP-DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA 450
M+ G +P DH+ FV +LSACSH+GLLEEG +F+ M+D Y + PRIEHF+C+ D+LGRA
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 451 GRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSN--MDIGLLAADNLLQLSPEQSGYYVL 508
G +D+ D I++MP++PN +W T+L +C + ++G AA+ L QL PE + YVL
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVL 830
Query: 509 LSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEE 568
L N+YA GRW+++ + R MK ++K G S V + VH F+AGD SHP + IY++
Sbjct: 831 LGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKK 890
Query: 569 LYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES--PIRITK 626
L L KM++ GYVP+T AL+D+E+E+KE L+ HSEKLA+ F L S PIRI K
Sbjct: 891 LKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMK 950
Query: 627 NLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
NLRVCGDCH A K ISKI GR+I++RD+NRFHHF+DG CSC D+W
Sbjct: 951 NLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 214/475 (45%), Gaps = 47/475 (9%)
Query: 48 ALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYV 107
A + H++L ++ L L+ AY G+ +ARKVFDE+ RN V + ++ Y
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACS--CSDNLRFGLQLHGAMLKVRLDWN 165
N + +AL+ R+MV G + Y + VL+AC S + FG Q+HG M K+ +
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 166 LFVGNGLISMYGKC-GCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
V N LISMY KC G + A ++ ++ VSWNS+++ Y+Q A + M
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 225 DLGQKPDAGTMASLMPAVTNTS-----------------------------------SDN 249
G +P T SL+ + + S +
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 250 VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKS-EVEPDA-ITCASVL 307
+ Y + +F +E ++ V+ N ++ ++ A L++ M +V P++ + S
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318
Query: 308 P--ACGDLSALLLGRRIHEYVERKKLRPNLL-LENSLIDMYARCGCLEDAQKVFDKMKFR 364
P + + L GR +H +V L ++ + N L++MYA+CG + DA++VF M +
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 365 DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVY 423
D SW S+I+ G A+ + M+ I P ++ LS+C+ + G +++
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIH 438
Query: 424 FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
+ + + + + L+ L G ++E + MP E ++ W +++ +
Sbjct: 439 GESLKLGIDLNVSVSN--ALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 219/477 (45%), Gaps = 48/477 (10%)
Query: 44 PDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
PD+ L+ + + + +G L+ A+A G ARKVF+++ RN V N ++
Sbjct: 222 PDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLM 281
Query: 104 RSYVNNRWYNDALLVFREMVNG-GFRPDNY-----TYPCVLKACSCSDNLRFGLQLHGAM 157
V +W +A +F +M + P++Y ++P A L+ G ++HG +
Sbjct: 282 VGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV--GLKKGREVHGHV 339
Query: 158 LKVRL-DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDA 216
+ L D+ + +GNGL++MY KCG + +AR V M +D VSWNSM+ G QN F +A
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA 399
Query: 217 LEVCREMDDLGQKPDAGTMASLMPAVT----------------------NTSSDNVLYV- 253
+E + M P + T+ S + + N S N L
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 254 ----------KDIFINLEKKSLVSWNVMITVYMKN--SMPGNAIDLYLQMEKSEVEPDAI 301
+ IF ++ + VSWN +I ++ S+P A+ +L +++ + + I
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP-EAVVCFLNAQRAGQKLNRI 518
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
T +SVL A LS LG++IH + + EN+LI Y +CG ++ +K+F +M
Sbjct: 519 TFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRM 578
Query: 362 -KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
+ RD +W S+IS Y AL L M +G D + +LSA + LE G
Sbjct: 579 AERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERG 638
Query: 421 KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+ + + + + LVD+ + GR+D A MP+ N W +++S
Sbjct: 639 -MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMIS 693
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 162/341 (47%), Gaps = 28/341 (8%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER-NVVFYNVMIRSYVN 108
K +H + N + + L+ Y CGE K+F ++ER + V +N MI Y++
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
N AL + M+ G R D++ Y VL A + L G+++H ++ L+ ++ V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
G+ L+ MY KCG L A + MP R+ SWNSM++GYA++ + ++AL++ M GQ
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 229 K-PDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKS--------LVSWNVMITVYMKNS 279
PD T ++ A ++ +++ F + E S + ++ M V +
Sbjct: 717 TPPDHVTFVGVLSACSHAG-----LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR-- 769
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPAC--GDLSALLLGRRIHEYVERKKLRPNLLL 337
G L +EK ++P+ + +VL AC + LG++ E + +L P +
Sbjct: 770 -AGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEML--FQLEPENAV 826
Query: 338 ENSLI-DMYARCGCLEDAQKVFDKMKFRDVA-----SWTSL 372
L+ +MYA G ED K KMK DV SW ++
Sbjct: 827 NYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 867
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/629 (37%), Positives = 366/629 (58%), Gaps = 38/629 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ YA G AR VFD + E+N V +N ++ +YV N +A ++F+ N
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL--- 219
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAM-LKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
++ C+L + Q +M ++ + WN +I+ Y + G + EAR +
Sbjct: 220 -VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNT-----IITGYAQSGKIDEARQLF 273
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD--------------LGQKPD-AGT 234
DE P +DV +W +MV+GY QN ++A E+ +M + G++ + A
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 235 MASLMPAVTNTSSDNVLYV-----------KDIFINLEKKSLVSWNVMITVYMKNSMPGN 283
+ +MP N S+ N + K++F + K+ VSW MI Y ++
Sbjct: 334 LFDVMPC-RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFE 392
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
A+ L++QME+ + + +S L C D+ AL LG+++H + + + N+L+
Sbjct: 393 ALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL 452
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
MY +CG +E+A +F +M +D+ SW ++I+ Y G G AL F M+ G+ PD
Sbjct: 453 MYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDAT 512
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
VA+LSACSH+GL+++G+ YF MT DY + P +H+AC+VDLLGRAG +++A++++K M
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 464 PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVT 523
P EP+ +WGTLL + RV+ N ++ AAD + + PE SG YVLLSN+YA +GRW +V
Sbjct: 573 PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVG 632
Query: 524 EVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVP 583
++R M+ + ++K PG S +E+ ++ HTF GD HP+ EI+ L L +MK+ GYV
Sbjct: 633 KLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVS 692
Query: 584 ETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKLIS 642
+T LHDVEEE+KE + HSE+LA+ + ++ PIR+ KNLRVC DCH A K ++
Sbjct: 693 KTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMA 752
Query: 643 KIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+I GR I++RD NRFHHFKDG CSCGDYW
Sbjct: 753 RITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 203/446 (45%), Gaps = 52/446 (11%)
Query: 74 AYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYT 133
+Y G A +VF + + V YN MI Y+ N + A +F EM D +
Sbjct: 73 SYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPE----RDLVS 128
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP 193
+ ++K + NL +L ++ + ++ N ++S Y + GC+ +AR V D MP
Sbjct: 129 WNVMIKGYVRNRNLGKAREL----FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG---------------------QKPDA 232
++ VSWN++++ Y QN + ++A + + ++ Q D+
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 233 GTMASLMPAVT----NTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY 288
+ ++ T S + + +F + + +W M++ Y++N M A +L+
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 289 LQM-EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP--NLLLENSLIDMY 345
+M E++EV +A+ L+ + G R+ E + P N+ N++I Y
Sbjct: 305 DKMPERNEVSWNAM-----------LAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
A+CG + +A+ +FDKM RD SW ++I+ Y +G AL LF +M+ G + +F
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFS 413
Query: 406 AILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPL 465
+ LS C+ LE GK ++ T A L+ + + G ++EA D+ K+M
Sbjct: 414 SALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL-MYCKCGSIEEANDLFKEMA- 471
Query: 466 EPNERVWGTLLSSCRVYSNMDIGLLA 491
+ W T+++ YS G +A
Sbjct: 472 GKDIVSWNTMIAG---YSRHGFGEVA 494
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 150/317 (47%), Gaps = 29/317 (9%)
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
N S ++ YA CG+ A+ +FD++ +R+ V + MI Y + +AL +F +M
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
G R + ++ L C+ L G QLHG ++K + FVGN L+ MY KCG +
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
EA + EM +D+VSWN+M+AGY+++ + AL M G KPD TM +++ A +
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 244 NTSSDNVLYVKDIFINLEKKSLVSWN-----VMITVYMKNSMPGNAIDLYLQMEKSEVEP 298
+T V + F + + V N M+ + + + +A +L M+ EP
Sbjct: 522 HTGL--VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNL---MKNMPFEP 576
Query: 299 DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL----ENS-----LIDMYARCG 349
DA ++L A R+H E + + + ENS L ++YA G
Sbjct: 577 DAAIWGTLLGAS----------RVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSG 626
Query: 350 CLEDAQKVFDKMKFRDV 366
D K+ +M+ + V
Sbjct: 627 RWGDVGKLRVRMRDKGV 643
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 39/320 (12%)
Query: 163 DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCRE 222
+WN+ IS Y + G EA V MPR VS+N M++GY +N F+ A ++ E
Sbjct: 66 EWNV-----AISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 223 MDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPG 282
M P+ ++ + + N+ +++F + ++ + SWN M++ Y +N
Sbjct: 121 M------PERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 283 NAIDLYLQM-EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN--LLLEN 339
+A ++ +M EK++V +A+ LSA + ++ E K R N L+ N
Sbjct: 175 DARSVFDRMPEKNDVSWNAL-----------LSAYVQNSKMEEACMLFKSRENWALVSWN 223
Query: 340 SLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISP 399
L+ + + + +A++ FD M RDV SW ++I+ Y +G+ A LF E SP
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE------SP 277
Query: 400 --DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAY 457
D + A++S + ++EE + F +M + ++ + ++ + R++ A
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVS-----WNAMLAGYVQGERMEMAK 332
Query: 458 DVIKQMPLEPNERVWGTLLS 477
++ MP N W T+++
Sbjct: 333 ELFDVMPCR-NVSTWNTMIT 351
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 14 ALVSSFQKSLASFQSPVIAVEL-----------LGKALDQYPDIIAL---KNVHTKLIYL 59
A+++ + +S SF++ + V++ AL D++AL K +H +L+
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 60 NSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVF 119
+G L+ Y CG A +F E++ +++V +N MI Y + + AL F
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 120 REMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG----LISM 175
M G +PD+ T VL ACS + + G Q M + D+ + + ++ +
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ---DYGVMPNSQHYACMVDL 555
Query: 176 YGKCGCLLEARYVLDEMP-RRDVVSWNSMVAG 206
G+ G L +A ++ MP D W +++
Sbjct: 556 LGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGA 587
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 247/636 (38%), Positives = 369/636 (58%), Gaps = 36/636 (5%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y P AR+VFDE+ R+ V YN MI Y+ +++ +F E ++ F+PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T VL+AC +L ++ MLK V N LI +Y KCG ++ AR V +
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT------- 243
M +D VSWNS+++GY Q+ +A+++ + M + ++ D T L+ T
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 244 ---------------NTSSDNVL---YVK--------DIFINLEKKSLVSWNVMITVYMK 277
+ S N L Y K IF ++ V+WN +I+ ++
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
+ + QM KSEV PD T LP C L+A LG+ IH + R L +
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
N+LI+MY++CGCLE++ +VF++M RDV +WT +I AYGM G+G AL F++M+ SGI
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 398 SPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAY 457
PD + F+AI+ ACSHSGL++EG F++M Y+I P IEH+AC+VDLL R+ ++ +A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 458 DVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAG 517
+ I+ MP++P+ +W ++L +CR +M+ + +++L+P+ GY +L SN YA
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 518 RWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMK 577
+W +V+ +R +K + I K PG S +E+ VH F +GD S PQS+ IY+ L +L M
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMA 786
Query: 578 ELGYVPETDSALHDVEEEDKEGHLAV-HSEKLAIVFALLNTHE-SPIRITKNLRVCGDCH 635
+ GY+P+ ++EEE+++ L HSE+LAI F LLNT +P+++ KNLRVCGDCH
Sbjct: 787 KEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCH 846
Query: 636 IAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
KLISKIVGREI++RD NRFH FKDG CSC D W
Sbjct: 847 EVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 158/620 (25%), Positives = 293/620 (47%), Gaps = 42/620 (6%)
Query: 31 IAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDE 90
++ + +AL ++ L+ +H +I L + KL+ Y+ EP ++ VF
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRR 64
Query: 91 IS-ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRF 149
+S +NV +N +IR++ N + +AL + ++ PD YT+P V+KAC+ +
Sbjct: 65 VSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 150 GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
G ++ +L + + +LFVGN L+ MY + G L AR V DEMP RD+VSWNS+++GY+
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN------------------------- 244
+ +++ALE+ E+ + PD+ T++S++PA N
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 245 TSSDNVLYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
+ +Y+K +F ++ + VS+N MI Y+K M ++ ++L+ +
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQF 303
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
+PD +T +SVL ACG L L L + I+ Y+ + + N LID+YA+CG + A+
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
VF+ M+ +D SW S+IS Y +G A+ LF M DHI ++ ++S +
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 417 LEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTL 475
L+ GK ++ + I + + L+D+ + G V ++ + M + W T+
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTV 480
Query: 476 LSSCRVYSNMDIGLLAADNLL--QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRR 533
+S+C + + GL + ++ P+ + + V L + A + + E+ + R
Sbjct: 481 ISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK-RLGKEIHCCLLRFG 539
Query: 534 IRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVE 593
I N + ++S + ++ G + G E + AL
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 594 EEDKEGHLAVHSEKLAIVFA 613
+ +K G + +AI++A
Sbjct: 600 DMEKSGIVPDSVVFIAIIYA 619
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 35/400 (8%)
Query: 16 VSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAY 75
V F ++L F+ ++ V + +A D+ K ++ ++ ++ L+ Y
Sbjct: 293 VRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVY 352
Query: 76 AACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYP 135
A CG+ TAR VF+ + ++ V +N +I Y+ + +A+ +F+ M+ + D+ TY
Sbjct: 353 AKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
Query: 136 CVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR 195
++ + +L+FG LH +K + +L V N LI MY KCG + ++ + M
Sbjct: 413 MLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG 472
Query: 196 DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV----- 250
D V+WN++++ + F L+V +M PD T +P + ++ +
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIH 532
Query: 251 --------------------LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPG 282
+Y K +F + ++ +V+W MI Y
Sbjct: 533 CCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGE 592
Query: 283 NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK-KLRPNLLLENSL 341
A++ + MEKS + PD++ +++ AC + G E ++ K+ P + +
Sbjct: 593 KALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACV 652
Query: 342 IDMYARCGCLEDAQKVFDKMKFR-DVASWTSLISAYGMTG 380
+D+ +R + A++ M + D + W S++ A +G
Sbjct: 653 VDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSG 692
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 132/292 (45%), Gaps = 30/292 (10%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H+ I + S+ L+ YA CGE G + K+F + + V +N +I + V
Sbjct: 428 KGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRF 487
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ L V +M PD T+ L C+ R G ++H +L+ + L +G
Sbjct: 488 GDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIG 547
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
N LI MY KCGCL + V + M RRDVV+W M+ Y + ALE +M+ G
Sbjct: 548 NALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIV 607
Query: 230 PDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGN---AID 286
PD+ +++ A +++ L + L + M T Y + M + +D
Sbjct: 608 PDSVVFIAIIYACSHS-------------GLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 287 LYLQMEKSE----------VEPDAITCASVLPAC---GDL-SALLLGRRIHE 324
L + +K ++PDA ASVL AC GD+ +A + RRI E
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 706
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 455 bits (1170), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/654 (36%), Positives = 381/654 (58%), Gaps = 33/654 (5%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VHT ++ + + L+ Y CG AR +FD+ ++VV +N MI Y N
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+AL +F M R ++ V+K C+ LRF QLH +++K ++ +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 171 GLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
L+ Y KC +L+A + E+ +VVSW +M++G+ QN ++A+++ EM G +
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 230 PDAGTMASLMPAVTNTSSDNV---------------------LYVK--------DIFINL 260
P+ T + ++ A+ S V YVK +F +
Sbjct: 395 PNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 261 EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL-LG 319
+ K +V+W+ M+ Y + AI ++ ++ K ++P+ T +S+L C +A + G
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMT 379
++ H + + +L +L + ++L+ MYA+ G +E A++VF + + +D+ SW S+IS Y
Sbjct: 515 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQH 574
Query: 380 GQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH 439
GQ AL +F EM+ + D + F+ + +AC+H+GL+EEG+ YF M D +I P EH
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634
Query: 440 FACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLS 499
+C+VDL RAG++++A VI+ MP +W T+L++CRV+ ++G LAA+ ++ +
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMK 694
Query: 500 PEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSH 559
PE S YVLLSN+YA++G W+E +VR LM R ++K PG S +E+ ++ ++FLAGD SH
Sbjct: 695 PEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSH 754
Query: 560 PQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE 619
P +IY +L L ++K+LGY P+T L D+++E KE LA HSE+LAI F L+ T +
Sbjct: 755 PLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPK 814
Query: 620 -SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHF-KDGLCSCGDYW 671
SP+ I KNLRVCGDCH+ KLI+KI REIV+RD+NRFHHF DG+CSCGD+W
Sbjct: 815 GSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 227/470 (48%), Gaps = 55/470 (11%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H + I ++ S+G L+ Y RKVFDE+ ERNVV + +I Y N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
++ L +F M N G +P+++T+ L + GLQ+H ++K LD + V
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVS 232
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN------------MR----- 212
N LI++Y KCG + +AR + D+ + VV+WNSM++GYA N MR
Sbjct: 233 NSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVR 292
Query: 213 -----FDDALEVCREMDDL-------------GQKPDAGTMASLMPAVTNTSS--DNVLY 252
F +++C + +L G D +LM A + ++ D +
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRL 352
Query: 253 VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
K+I ++VSW MI+ +++N A+DL+ +M++ V P+ T + +L A
Sbjct: 353 FKEIGC---VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
+S +H V + + + +L+D Y + G +E+A KVF + +D+ +W+++
Sbjct: 410 ISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL-LEEGKVYFKQMTDDY 431
++ Y TG+ A+ +F E+ GI P+ F +IL+ C+ + + +GK + +
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF-----HGF 520
Query: 432 RITPRIEHFAC----LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
I R++ C L+ + + G ++ A +V K+ E + W +++S
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMIS 569
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 192/428 (44%), Gaps = 40/428 (9%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A +FD+ R+ Y ++ + + +A +F + G D + VLK +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
+ FG QLH +K ++ VG L+ Y K + R V DEM R+VV+W ++
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM----------------PAVTNTSS 247
++GYA+N D+ L + M + G +P++ T A+ + V
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 248 DNVLYVKDIFINL-----------------EKKSLVSWNVMITVYMKNSMPGNAIDLYLQ 290
D + V + INL E KS+V+WN MI+ Y N + A+ ++
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYS 285
Query: 291 MEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGC 350
M + V + ASV+ C +L L ++H V + + + +L+ Y++C
Sbjct: 286 MRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 351 LEDAQKVFDKMK-FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILS 409
+ DA ++F ++ +V SWT++IS + A+ LFSEM+ G+ P+ + IL+
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 410 ACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNE 469
A ++ +V+ + + +Y + + L+D + G+V+EA V + + +
Sbjct: 406 ALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAKVFSGID-DKDI 459
Query: 470 RVWGTLLS 477
W +L+
Sbjct: 460 VAWSAMLA 467
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Query: 46 IIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRS 105
+I+ VH +++ N + ++G L+ AY G+ A KVF I ++++V ++ M+
Sbjct: 409 VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 106 YVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSD-NLRFGLQLHGAMLKVRLDW 164
Y A+ +F E+ GG +P+ +T+ +L C+ ++ ++ G Q HG +K RLD
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
+L V + L++MY K G + A V +D+VSWNSM++GYAQ+ + AL+V +EM
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 225 DLGQKPDAGTMASLMPAVTN 244
K D T + A T+
Sbjct: 589 KRKVKMDGVTFIGVFAACTH 608
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%)
Query: 246 SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
SS + ++F + S+ ++ + ++ A L+L + + +E D +S
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
VL L L GR++H + ++ + SL+D Y + +D +KVFD+MK R+
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
V +WT+LIS Y L LF MQN G P+ F A L + G+ G
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 453 bits (1165), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/659 (37%), Positives = 373/659 (56%), Gaps = 75/659 (11%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFD-------------------- 89
K VH+ ++ L N S+ L+ YA CG+P A+ VFD
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 90 -----------EISERNVVFYNVMIRSYVNNRWYN-DALLVFREMVNGGF-RPDNYTYPC 136
+++ER++V +N MI + N R Y+ AL +F +M+ PD +T
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGF-NQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD 196
VL AC+ + L G Q+H ++ D + V N LISMY +CG + AR ++++ +D
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 197 --VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVK 254
+ + +++ GY + + D+ Q K
Sbjct: 345 LKIEGFTALLDGYIK-------------LGDMNQ------------------------AK 367
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
+IF++L+ + +V+W MI Y ++ G AI+L+ M P++ T A++L L+
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF-RDVASWTSLI 373
+L G++IH + ++ + N+LI MYA+ G + A + FD ++ RD SWTS+I
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
A G AL LF M G+ PDHI +V + SAC+H+GL+ +G+ YF M D +I
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAAD 493
P + H+AC+VDL GRAG + EA + I++MP+EP+ WG+LLS+CRV+ N+D+G +AA+
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFL 553
LL L PE SG Y L+N+Y+ G+W+E ++R MK R++K G S +E+ +VH F
Sbjct: 608 RLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFG 667
Query: 554 AGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFA 613
D +HP+ EIY + + ++K++GYVP+T S LHD+EEE KE L HSEKLAI F
Sbjct: 668 VEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFG 727
Query: 614 LLNT-HESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
L++T ++ +RI KNLRVC DCH A K ISK+VGREI++RDT RFHHFKDG CSC DYW
Sbjct: 728 LISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 229/525 (43%), Gaps = 109/525 (20%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ AY+ G+ + + FD++ +R+ V + MI Y N Y+ A+ V +MV G P
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+T VL + + + + G ++H ++K+ L N+ V N L++MY KCG + A++V D
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
M RD+ SWN+M+A + Q + D A+
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQ------------------------------- 234
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK-SEVEPDAITCASVLPA 309
F + ++ +V+WN MI+ + + A+D++ +M + S + PD T ASVL A
Sbjct: 235 ------FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK------------- 356
C +L L +G++IH ++ + ++ N+LI MY+RCG +E A++
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 357 --------------------VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+F +K RDV +WT++I Y G A+ LF M G
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGG 408
Query: 397 ISPDHIAFVAILSACS-----------HSGLLEEGKVYFKQMT----------------- 428
P+ A+LS S H ++ G++Y ++
Sbjct: 409 QRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSAS 468
Query: 429 ---DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVY 482
D R + ++ L + G +EA ++ + M +E P+ + + S+C
Sbjct: 469 RAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHA 528
Query: 483 SNMDIGLLAAD---NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTE 524
++ G D ++ ++ P S +Y + +++ +AG +E E
Sbjct: 529 GLVNQGRQYFDMMKDVDKIIPTLS-HYACMVDLFGRAGLLQEAQE 572
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 156/351 (44%), Gaps = 73/351 (20%)
Query: 146 NLRFGLQL-HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMV 204
N RF QL H ++K L +++++ N L+++Y K G L AR + DEMP R SWN+++
Sbjct: 28 NGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL 87
Query: 205 AGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKS 264
+ Y++ D E F L ++
Sbjct: 88 SAYSKRGDMDSTCE-------------------------------------FFDQLPQRD 110
Query: 265 LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE 324
VSW MI Y AI + M K +EP T +VL + + G+++H
Sbjct: 111 SVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHS 170
Query: 325 YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS---------------- 368
++ + LR N+ + NSL++MYA+CG A+ VFD+M RD++S
Sbjct: 171 FIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDL 230
Query: 369 ---------------WTSLISAYGMTGQGCNALALFSEM-QNSGISPDHIAFVAILSACS 412
W S+IS + G AL +FS+M ++S +SPD ++LSAC+
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 413 HSGLLEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
+ L GK ++ +T + I+ + L+ + R G V+ A +I+Q
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVETARRLIEQ 339
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 249/657 (37%), Positives = 367/657 (55%), Gaps = 37/657 (5%)
Query: 52 VHTKLI-YLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VH +++ L+S P L L+ Y+ P +AR V RNVV + +I N
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
++ AL+ F EM G P+++T+PC KA + G Q+H +K ++FVG
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGC 147
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
MY K +AR + DE+P R++ +WN+ ++ + R +A+E E + P
Sbjct: 148 SAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP 207
Query: 231 DAGTMASLMPAV----------------------TNTSSDNVLY-----------VKDIF 257
++ T + + A T+ S N L + IF
Sbjct: 208 NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIF 267
Query: 258 INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
+ K+ VSW ++ Y++N A LYL+ K VE +SVL AC ++ L
Sbjct: 268 TEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLE 327
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
LGR IH + + + + + ++L+DMY +CGC+ED+++ FD+M +++ + SLI Y
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 378 MTGQGCNALALFSEM--QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
GQ ALALF EM + G +P+++ FV++LSACS +G +E G F M Y I P
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
EH++C+VD+LGRAG V+ AY+ IK+MP++P VWG L ++CR++ +GLLAA+NL
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENL 507
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
+L P+ SG +VLLSN +A AGRW E VR +K I+K G S + + +QVH F A
Sbjct: 508 FKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAK 567
Query: 556 DTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALL 615
D SH +KEI L L +M+ GY P+ +L+D+EEE+K ++ HSEKLA+ F LL
Sbjct: 568 DRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLL 627
Query: 616 NTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+ S PIRITKNLR+CGDCH K +S V REI++RD NRFH FKDG+CSC DYW
Sbjct: 628 SLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 163/363 (44%), Gaps = 37/363 (10%)
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNL--FVGNGLISMYGKCGCLLEARYVLDEMPR 194
+LK + ++R G +H ++K LD F+ N LI+MY K AR VL P
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN------TSSD 248
R+VVSW S+++G AQN F AL EM G P+ T AV +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 249 NVLYVK-----DIFIN----------------------LEKKSLVSWNVMITVYMKNSMP 281
+ L VK D+F+ + +++L +WN I+ + + P
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
AI+ +++ + + P++IT + L AC D L LG ++H V R ++ + N L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
ID Y +C + ++ +F +M ++ SW SL++AY + A L+ + +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
++LSAC+ LE G+ + I + LVD+ G+ G ++++
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKCGCIEDSEQAFD 369
Query: 462 QMP 464
+MP
Sbjct: 370 EMP 372
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Query: 314 SALLLGRRIH-EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
S++ LGR +H V+ P L N LI+MY++ E A+ V R+V SWTSL
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
IS G AL F EM+ G+ P+ F A + L GK R
Sbjct: 80 ISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGR 139
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
I + D+ + D+A + ++P E N W +S+
Sbjct: 140 ILDVFVGCSAF-DMYCKTRLRDDARKLFDEIP-ERNLETWNAFISN 183
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/606 (38%), Positives = 362/606 (59%), Gaps = 55/606 (9%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYND--ALLVFREMVNGGF-RPDNYTYPCVLKA 140
A K+F+++ +RN +N +IR + + A+ +F EM++ F P+ +T+P VLKA
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 141 CSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARY------------V 188
C+ + ++ G Q+HG LK + FV + L+ MY CG + +AR V
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 189 LDEMPRRD--VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS 246
+ + +RD +V WN M+ GY MR D C+ A M
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGY---MRLGD----CK----------AARM----------- 229
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
+F + ++S+VSWN MI+ Y N +A++++ +M+K ++ P+ +T SV
Sbjct: 230 ---------LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
LPA L +L LG +H Y E +R + +L ++LIDMY++CG +E A VF+++ +V
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 367 ASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQ 426
+W+++I+ + + GQ +A+ F +M+ +G+ P +A++ +L+ACSH GL+EEG+ YF Q
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 427 MTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMD 486
M + PRIEH+ C+VDLLGR+G +DEA + I MP++P++ +W LL +CR+ N++
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVE 460
Query: 487 IGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELN 546
+G A+ L+ + P SG YV LSN+YA G W EV+E+R MK + IRK PG S ++++
Sbjct: 461 MGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDID 520
Query: 547 SQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSE 606
+H F+ D SHP++KEI L + K++ GY P T L ++EEEDKE L HSE
Sbjct: 521 GVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSE 580
Query: 607 KLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLC 665
K+A F L++T PIRI KNLR+C DCH + KLISK+ R+I +RD RFHHF+DG C
Sbjct: 581 KIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSC 640
Query: 666 SCGDYW 671
SC DYW
Sbjct: 641 SCMDYW 646
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 154/310 (49%), Gaps = 29/310 (9%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y G+ AR +FD++ +R+VV +N MI Y N ++ DA+ VFREM G RP+
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 131 NYTYPCVLKACSCSDNLRFG--LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
T VL A S +L G L L+ +R+D L G+ LI MY KCG + +A +V
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL--GSALIDMYSKCGIIEKAIHV 331
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN---T 245
+ +PR +V++W++M+ G+A + + DA++ +M G +P +L+ A ++
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 246 SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
+ + + ++ + + + M+ + ++ + A + L M ++PD + +
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKA 448
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLEN---------SLIDMYARCGCLEDAQK 356
+L AC R+ VE K N+L++ +L +MYA G + +
Sbjct: 449 LLGAC----------RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 498
Query: 357 VFDKMKFRDV 366
+ +MK +D+
Sbjct: 499 MRLRMKEKDI 508
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 91/218 (41%), Gaps = 20/218 (9%)
Query: 7 RNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHE--- 63
R++ ++S + SL F + V K D P+ + L +V + L S E
Sbjct: 237 RSVVSWNTMISGY--SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGE 294
Query: 64 -------------NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
+ LG L+ Y+ CG A VF+ + NV+ ++ MI + +
Sbjct: 295 WLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHG 354
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR-LDWNLFVG 169
DA+ F +M G RP + Y +L ACS + G + M+ V L+ +
Sbjct: 355 QAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 414
Query: 170 NGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAG 206
++ + G+ G L EA + MP + D V W +++
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGA 452
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 249/631 (39%), Positives = 366/631 (58%), Gaps = 45/631 (7%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A KVFD++SE NVV + +MI + + +A+ F +MV GF D +T V AC+
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKC---GCLLEARYVLDEMPRRDVVSW 200
+NL G QLH ++ L + V L+ MY KC G + + R V D M V+SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 201 NSMVAGYAQNMRF-DDALEVCREMDDLGQ-KPDAGTMASLMPAVTNTSSDNV-------- 250
+++ GY +N +A+ + EM G +P+ T +S A N S V
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 251 -----------------LYVKD--------IFINLEKKSLVSWNVMITVYMKNSMPGNAI 285
++VK F +L +K+LVS+N + +N A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 286 DLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
L ++ + E+ A T AS+L ++ ++ G +IH V + L N + N+LI MY
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
++CG ++ A +VF+ M+ R+V SWTS+I+ + G L F++M G+ P+ + +V
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579
Query: 406 AILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPL 465
AILSACSH GL+ EG +F M +D++I P++EH+AC+VDLL RAG + +A++ I MP
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPF 639
Query: 466 EPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEV 525
+ + VW T L +CRV+SN ++G LAA +L+L P + Y+ LSNIYA AG+W+E TE+
Sbjct: 640 QADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEM 699
Query: 526 RSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPET 585
R MK R + K G S +E+ ++H F GDT+HP + +IY+EL L+ ++K GYVP+T
Sbjct: 700 RRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDT 759
Query: 586 DSALHDVEEEDKEGH----LAVHSEKLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKL 640
D LH +EEE+ E L HSEK+A+ F L++T +S P+R+ KNLRVCGDCH A K
Sbjct: 760 DLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKY 819
Query: 641 ISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
IS + GREIV+RD NRFHHFKDG CSC DYW
Sbjct: 820 ISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 172/339 (50%), Gaps = 52/339 (15%)
Query: 122 MVNGGFRP-DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
M G RP D+ T+ +LK+C + + R G +H +++ ++ + + N LIS+Y K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 181 CLLEARYVLDEMPR---RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMAS 237
+A V + M R RDVVSW++M+A Y N R DA++V E +LG P+ +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 238 LMPAVTNTSSDNV--------------------------LYVK---------DIFINLEK 262
++ A +N+ V ++VK +F + +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
++V+W +MIT M+ P AI +L M S E D T +SV AC +L L LG+++
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 323 HEYVERKKLRPNLLLENSLIDMYARC---GCLEDAQKVFDKMKFRDVASWTSLISAYGMT 379
H + R L + +E SL+DMYA+C G ++D +KVFD+M+ V SWT+LI+ Y
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY--- 346
Query: 380 GQGCN----ALALFSEMQNSG-ISPDHIAFVAILSACSH 413
+ CN A+ LFSEM G + P+H F + AC +
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 216/471 (45%), Gaps = 47/471 (9%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEI---SERNVVFYNVMIRSY 106
K VH +LI + + L L+ Y+ G+ A VF+ + +R+VV ++ M+ Y
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 107 VNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKV-RLDWN 165
NN DA+ VF E + G P++Y Y V++ACS SD + G G ++K + +
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
Query: 166 LFVGNGLISMYGKCGCLLEARY-VLDEMPRRDVVSWNSMVA-----GYAQN-MRF----- 213
+ VG LI M+ K E Y V D+M +VV+W M+ G+ + +RF
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 214 -----------DDALEVCREMDDLGQKPDAGTMA-----------SLMPAVTNTSSD-NV 250
C E+++L + A SL+ S+D +V
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSV 321
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKN-SMPGNAIDLYLQM-EKSEVEPDAITCASVLP 308
+ +F +E S++SW +IT YMKN ++ AI+L+ +M + VEP+ T +S
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
ACG+LS +G+++ ++ L N + NS+I M+ + +EDAQ+ F+ + +++ S
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
+ + + A L SE+ + F ++LS ++ G + +G+ Q+
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 429 DDYRITPRIEHFAC--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
++ C L+ + + G +D A V M N W ++++
Sbjct: 502 ---KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMIT 548
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 178/393 (45%), Gaps = 42/393 (10%)
Query: 23 LASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPG 82
L+ F+S + + A + ++ K +H+ I S + L+ YA C G
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAI--RSGLVDDVECSLVDMYAKCSADG 319
Query: 83 TA---RKVFDEISERNVVFYNVMIRSYVNN-RWYNDALLVFREMVNGG-FRPDNYTYPCV 137
+ RKVFD + + +V+ + +I Y+ N +A+ +F EM+ G P+++T+
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 138 LKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV 197
KAC + R G Q+ G K L N V N +ISM+ K + +A+ + + +++
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL 439
Query: 198 VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS---------- 247
VS+N+ + G +N+ F+ A ++ E+ + A T ASL+ V N S
Sbjct: 440 VSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 248 -----------------------DNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNA 284
++ +F +E ++++SW MIT + K+
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRV 559
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG-RRIHEYVERKKLRPNLLLENSLID 343
++ + QM + V+P+ +T ++L AC + + G R + E K++P + ++D
Sbjct: 560 LETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVD 619
Query: 344 MYARCGCLEDAQKVFDKMKFR-DVASWTSLISA 375
+ R G L DA + + M F+ DV W + + A
Sbjct: 620 LLCRAGLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 157/362 (43%), Gaps = 42/362 (11%)
Query: 17 SSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYA 76
SS K+ + P + ++LG+A + N S+ ++ +
Sbjct: 377 SSAFKACGNLSDPRVGKQVLGQAFKR-----------------GLASNSSVANSVISMFV 419
Query: 77 ACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPC 136
A++ F+ +SE+N+V YN + N + A + E+ +T+
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFAS 479
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD 196
+L + ++R G Q+H ++K+ L N V N LISMY KCG + A V + M R+
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRN 539
Query: 197 VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVK 254
V+SW SM+ G+A++ LE +M + G KP+ T +++ A ++ S+ +
Sbjct: 540 VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 255 DIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
++ + + K + + M+ + + + +A + M + D + + L AC
Sbjct: 600 SMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM---PFQADVLVWRTFLGAC--- 653
Query: 314 SALLLGRRIHEYVERKKLRPNLLLE---------NSLIDMYARCGCLEDAQKVFDKMKFR 364
R+H E KL +LE L ++YA G E++ ++ KMK R
Sbjct: 654 -------RVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKER 706
Query: 365 DV 366
++
Sbjct: 707 NL 708
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 9/202 (4%)
Query: 283 NAIDLYLQMEKSEVEP-DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
+A+DL M + + P D++T +S+L +C LG+ +H + + P+ +L NSL
Sbjct: 47 SALDL---MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSL 103
Query: 342 IDMYARCGCLEDAQKVFDKMKF---RDVASWTSLISAYGMTGQGCNALALFSEMQNSGIS 398
I +Y++ G A+ VF+ M+ RDV SW+++++ YG G+ +A+ +F E G+
Sbjct: 104 ISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV 163
Query: 399 PDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA-GRVDEAY 457
P+ + A++ ACS+S + G+V + + L+D+ + + AY
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 458 DVIKQMPLEPNERVWGTLLSSC 479
V +M E N W +++ C
Sbjct: 224 KVFDKMS-ELNVVTWTLMITRC 244
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 20/310 (6%)
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPR-----RDVVSWNSMVAGYAQNMRFDDALEVCRE 222
V + LI + G L A LD M R D V+++S++ + F V
Sbjct: 28 VADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHAR 87
Query: 223 MDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE---KKSLVSWNVMITVYMKNS 279
+ + +PD+ SL+ ++ + S D+ +D+F + K+ +VSW+ M+ Y N
Sbjct: 88 LIEFDIEPDSVLYNSLI-SLYSKSGDSA-KAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK-KLRPNLLLE 338
+AI ++++ + + P+ +V+ AC + + +GR ++ + ++ +
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 339 NSLIDMYARC-GCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
SLIDM+ + E+A KVFDKM +V +WT +I+ G A+ F +M SG
Sbjct: 206 CSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGF 265
Query: 398 SPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC-LVDLLGRA---GRV 453
D ++ SAC+ L G KQ+ + ++ C LVD+ + G V
Sbjct: 266 ESDKFTLSSVFSACAELENLSLG----KQLHSWAIRSGLVDDVECSLVDMYAKCSADGSV 321
Query: 454 DEAYDVIKQM 463
D+ V +M
Sbjct: 322 DDCRKVFDRM 331
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 246/663 (37%), Positives = 374/663 (56%), Gaps = 37/663 (5%)
Query: 45 DIIAL-KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
D +AL + VH + L ++ L+ Y + G AR VFD +SER+++ +N +I
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 104 RSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC-SDNLRFGLQLHGAMLKVRL 162
N +A+ +F +++ G +PD YT VLKA S + L Q+H +K+
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 163 DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCRE 222
+ FV LI Y + C+ EA +L E D+V+WN+M+AGY Q+ L++
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAE-ILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFAL 507
Query: 223 MDDLGQKPDAGTMASLMPA----------------VTNTSSDNVLYVK----DIFINLEK 262
M G++ D T+A++ + D L+V D+++
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 263 KSL-------------VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA 309
S V+W MI+ ++N A ++ QM V PD T A++ A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
L+AL GR+IH + + + SL+DMYA+CG ++DA +F +++ ++ +W
Sbjct: 628 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 687
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
+++ G+G L LF +M++ GI PD + F+ +LSACSHSGL+ E + + M
Sbjct: 688 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 747
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
DY I P IEH++CL D LGRAG V +A ++I+ M +E + ++ TLL++CRV + + G
Sbjct: 748 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGK 807
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV 549
A LL+L P S YVLLSN+YA A +W E+ R++MK +++K PG S +E+ +++
Sbjct: 808 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKI 867
Query: 550 HTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLA 609
H F+ D S+ Q++ IY ++ ++ +K+ GYVPETD L DVEEE+KE L HSEKLA
Sbjct: 868 HIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLA 927
Query: 610 IVFALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
+ F LL+T S PIR+ KNLRVCGDCH A K I+K+ REIV+RD NRFH FKDG+CSCG
Sbjct: 928 VAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCG 987
Query: 669 DYW 671
DYW
Sbjct: 988 DYW 990
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 198/422 (46%), Gaps = 37/422 (8%)
Query: 89 DEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLR 148
D S ++F N + Y+++ Y+ L F +MV D T+ +L D+L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 149 FGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYA 208
G Q+H LK+ LD L V N LI+MY K AR V D M RD++SWNS++AG A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT-------------------NTSSDN 249
QN +A+ + ++ G KPD TM S++ A + N SD+
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 250 VLY------------VKDIFINLEKKS--LVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
+ +K+ I E+ + LV+WN M+ Y ++ + L+ M K
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
D T A+V CG L A+ G+++H Y + +L + + ++DMY +CG + AQ
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 356 KVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
FD + D +WT++IS G+ A +FS+M+ G+ PD + A S
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 416 LLEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGT 474
LE+G+ ++ + + P + LVD+ + G +D+AY + K++ + N W
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNA 689
Query: 475 LL 476
+L
Sbjct: 690 ML 691
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 184/392 (46%), Gaps = 15/392 (3%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
D++ K H +++ + L L+ Y+ CG AR+VFD++ +R++V +N ++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 105 SYVNNRW-----YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
+Y + A L+FR + T +LK C S + HG K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 160 VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEV 219
+ LD + FV L+++Y K G + E + + +EMP RDVV WN M+ Y + ++A+++
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 220 CREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVS----WNVMITVY 275
G P+ T+ L+ ++ SD VK F N S VS N ++ Y
Sbjct: 234 SSAFHSSGLNPNEITL-RLLARISGDDSD-AGQVKS-FANGNDASSVSEIIFRNKGLSEY 290
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+ + + + M +S+VE D +T +L + +L LG+++H + L L
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+ NSLI+MY + A+ VFD M RD+ SW S+I+ G A+ LF ++
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
G+ PD ++L A S L EG KQ+
Sbjct: 411 GLKPDQYTMTSVLKAASS---LPEGLSLSKQV 439
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 118/316 (37%), Gaps = 80/316 (25%)
Query: 138 LKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV 197
L+ S +L G H +L + F+ N LISMY KCG L AR V D+MP RD+
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 198 VSWNSMVAGYAQN---------------------------MRFDDALEVCREMDDL---- 226
VSWNS++A YAQ+ M L++C +
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 227 ------------GQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITV 274
G + AG + ++ VL F + + +V WN+M+
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVL-----FEEMPYRDVVLWNLMLKA 220
Query: 275 YMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN 334
Y++ AIDL S + P+ IT + GD S
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDS-------------------- 260
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
+ + +A DA V ++ FR+ +S Y +GQ L F++M
Sbjct: 261 ---DAGQVKSFANGN---DASSV-SEIIFRNKG-----LSEYLHSGQYSALLKCFADMVE 308
Query: 395 SGISPDHIAFVAILSA 410
S + D + F+ +L+
Sbjct: 309 SDVECDQVTFILMLAT 324
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
S L+LG+ H + + P L N+LI MY++CG L A++VFDKM RD+ SW S++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 374 SAYGMTGQGC-----NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
+AY + + A LF ++ + + +L C HSG + + +
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 429 DDYRITPRIEHF--ACLVDLLGRAGRVDEAYDVIKQMP 464
+I + F LV++ + G+V E + ++MP
Sbjct: 173 ---KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMP 207
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/609 (38%), Positives = 349/609 (57%), Gaps = 42/609 (6%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
+NV +R +++++ ++R M+ G PD +++P +LK+C+ G QLH +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVS--WNSMVAGYAQNMRFDDA 216
K + FV LISMY KCG + +AR V +E P+ +S +N++++GY N + DA
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 217 LEVCREMDDLGQKPDAGTMASLMP---------------------------AVTNT---- 245
+ R M + G D+ TM L+P AV N+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 246 --SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
+V + +F + K L++WN +I+ Y +N + + ++LY QM+ S V PD T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
SVL +C L A +G + + VE PN+ + N+ I MYARCG L A+ VFD M
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
+ + SWT++I YGM G G L LF +M GI PD FV +LSACSHSGL ++G
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 424 FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYS 483
F+ M +Y++ P EH++CLVDLLGRAGR+DEA + I+ MP+EP+ VWG LL +C+++
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 484 NMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNV 543
N+D+ LA +++ P GYYVL+SNIY+ + + + +R +M+ R RK PG S V
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Query: 544 ELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAV 603
E +VH FLAGD SH Q++E++ L L + EL + D +V +E
Sbjct: 501 EHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRG-EEVSSTTRE----- 554
Query: 604 HSEKLAIVFALLNT-HESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKD 662
HSE+LAI F +LN+ + I + KNLRVC DCH+ K +SKIV R+ V+RD +RFH+FKD
Sbjct: 555 HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKD 614
Query: 663 GLCSCGDYW 671
G+CSC DYW
Sbjct: 615 GVCSCKDYW 623
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 177/398 (44%), Gaps = 38/398 (9%)
Query: 16 VSSFQKSLASFQSP-VIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRA 74
+S ++ L S SP + + K+ ++ + +H + P + L+
Sbjct: 38 ISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISM 97
Query: 75 YAACGEPGTARKVFDE--ISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNY 132
Y CG ARKVF+E S + V YN +I Y N DA +FR M G D+
Sbjct: 98 YCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSV 157
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
T ++ C+ + L G LHG +K LD + V N I+MY KCG + R + DEM
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM 217
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV-- 250
P + +++WN++++GY+QN D LE+ +M G PD T+ S++ + + + +
Sbjct: 218 PVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGH 277
Query: 251 ---------LYVKDIFI------------NLEK----------KSLVSWNVMITVYMKNS 279
+V ++F+ NL K KSLVSW MI Y +
Sbjct: 278 EVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHG 337
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK-KLRPNLLLE 338
M + L+ M K + PD VL AC G + ++R+ KL P
Sbjct: 338 MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY 397
Query: 339 NSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLISA 375
+ L+D+ R G L++A + + M D A W +L+ A
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 223/512 (43%), Positives = 317/512 (61%), Gaps = 36/512 (7%)
Query: 196 DVVSWNSMVAGYAQNMRFDDALEVCREMDDLG-QKPDAGTMASLMPAVTNTSS------- 247
+V WN+++ GYA+ A + REM G +PD T L+ AVT +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 248 ---------DNVLYVKD-----------------IFINLEKKSLVSWNVMITVYMKNSMP 281
+++YV++ +F + +K LV+WN +I + +N P
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
A+ LY +M ++PD T S+L AC + AL LG+R+H Y+ + L NL N L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS-GISPD 400
+D+YARCG +E+A+ +FD+M ++ SWTSLI + G G A+ LF M+++ G+ P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI 460
I FV IL ACSH G+++EG YF++M ++Y+I PRIEHF C+VDLL RAG+V +AY+ I
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 461 KQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWK 520
K MP++PN +W TLL +C V+ + D+ A +LQL P SG YVLLSN+YA RW
Sbjct: 384 KSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWS 443
Query: 521 EVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELG 580
+V ++R M R ++K PG S VE+ ++VH FL GD SHPQS IY +L + G+++ G
Sbjct: 444 DVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEG 503
Query: 581 YVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAK 639
YVP+ + DVEEE+KE + HSEK+AI F L++T E SPI + KNLRVC DCH+A K
Sbjct: 504 YVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIK 563
Query: 640 LISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
L+SK+ REIV+RD +RFHHFK+G CSC DYW
Sbjct: 564 LVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 175/367 (47%), Gaps = 46/367 (12%)
Query: 84 ARKVFDEISER-NVVFYNVMIRSYVNNRWYNDALLVFREM-VNGGFRPDNYTYPCVLKAC 141
A KVF +I + NV +N +IR Y A ++REM V+G PD +TYP ++KA
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 142 SCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWN 201
+ ++R G +H +++ ++V N L+ +Y CG + A V D+MP +D+V+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 202 SMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA-------------------- 241
S++ G+A+N + ++AL + EM+ G KPD T+ SL+ A
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 242 --VTNTSSDNVLY-----------VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY 288
N S NVL K +F + K+ VSW +I N AI+L+
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 289 LQMEKSE-VEPDAITCASVLPACGDLSALLLG----RRIHEYVERKKLRPNLLLENSLID 343
ME +E + P IT +L AC + G RR+ E K+ P + ++D
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR---EEYKIEPRIEHFGCMVD 368
Query: 344 MYARCGCLEDAQKVFDKMKFR-DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHI 402
+ AR G ++ A + M + +V W +L+ A T G + LA F+ +Q + P+H
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA--CTVHGDSDLAEFARIQILQLEPNHS 426
Query: 403 AFVAILS 409
+LS
Sbjct: 427 GDYVLLS 433
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 163/343 (47%), Gaps = 25/343 (7%)
Query: 35 LLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER 94
L KA+ D+ + +H+ +I + L+ YA CG+ +A KVFD++ E+
Sbjct: 126 FLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
++V +N +I + N +AL ++ EM + G +PD +T +L AC+ L G ++H
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
M+KV L NL N L+ +Y +CG + EA+ + DEM ++ VSW S++ G A N
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 215 DALEVCREMDDL-GQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVS-WNV 270
+A+E+ + M+ G P T ++ A ++ + Y + + + + + +
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC 365
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC---GDLSALLLGRRIHEYVE 327
M+ + + G Y ++ ++P+ + ++L AC GD R ++
Sbjct: 366 MVDLLAR---AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFAR-----IQ 417
Query: 328 RKKLRPN-----LLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
+L PN +LL N MYA D QK+ +M RD
Sbjct: 418 ILQLEPNHSGDYVLLSN----MYASEQRWSDVQKIRKQM-LRD 455
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 440 bits (1131), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/592 (37%), Positives = 344/592 (58%), Gaps = 39/592 (6%)
Query: 82 GTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKAC 141
G A +F +I N+ +N++IR + + A + +M+ PDN T+P ++KA
Sbjct: 68 GYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKAS 127
Query: 142 SCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWN 201
S + + G Q H +++ +++V N L+ MY CG + A + +M RDVVSW
Sbjct: 128 SEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWT 187
Query: 202 SMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE 261
SMVAGY + ++A REM D +
Sbjct: 188 SMVAGYCKCGMVENA----REMFD---------------------------------EMP 210
Query: 262 KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRR 321
++L +W++MI Y KN+ AIDL+ M++ V + SV+ +C L AL G R
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 322 IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQ 381
+EYV + + NL+L +L+DM+ RCG +E A VF+ + D SW+S+I + G
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGH 330
Query: 382 GCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA 441
A+ FS+M + G P + F A+LSACSH GL+E+G ++ M D+ I PR+EH+
Sbjct: 331 AHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYG 390
Query: 442 CLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPE 501
C+VD+LGRAG++ EA + I +M ++PN + G LL +C++Y N ++ + L+++ PE
Sbjct: 391 CIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPE 450
Query: 502 QSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG-DTSHP 560
SGYYVLLSNIYA AG+W ++ +R +MK + ++K PG S +E++ +++ F G D HP
Sbjct: 451 HSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHP 510
Query: 561 QSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE- 619
+ +I + ++GK++ +GY T A DV+EE+KE + +HSEKLAI + ++ T
Sbjct: 511 EMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPG 570
Query: 620 SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+ IRI KNLRVC DCH KLIS++ GRE+++RD NRFHHF++G+CSC DYW
Sbjct: 571 TTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 140/302 (46%), Gaps = 21/302 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y CG AR++FDE+ RN+ +++MI Y N + A+ +F M G +
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
V+ +C+ L FG + + ++K + NL +G L+ M+ +CG + +A +V +
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
+P D +SW+S++ G A + A+ +M LG P T +++ A ++ V
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL--V 366
Query: 251 LYVKDIFINLEKKS-----LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
+I+ N++K L + ++ + + A + L+M V+P+A +
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM---HVKPNAPILGA 423
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPN-----LLLENSLIDMYARCGCLEDAQKVFDK 360
+L AC + R+ + K++P +LL N +YA G + + + D
Sbjct: 424 LLGACKIYKNTEVAERVGNML--IKVKPEHSGYYVLLSN----IYACAGQWDKIESLRDM 477
Query: 361 MK 362
MK
Sbjct: 478 MK 479
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/603 (37%), Positives = 351/603 (58%), Gaps = 39/603 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y C A+++FDE N+ N M +YV +AL VF M++ G RPD
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ + +CS N+ +G HG +L+ + + N LI MY KC A + D
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
M + VV+WNS+VAGY +N D A E
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWET------------------------------- 425
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITCASVLPA 309
F + +K++VSWN +I+ ++ S+ AI+++ M+ E V D +T S+ A
Sbjct: 426 ------FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
CG L AL L + I+ Y+E+ ++ ++ L +L+DM++RCG E A +F+ + RDV++W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
T+ I A M G A+ LF +M G+ PD +AFV L+ACSH GL+++GK F M
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
+ ++P H+ C+VDLLGRAG ++EA +I+ MP+EPN+ +W +LL++CRV N+++
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV 549
AA+ + L+PE++G YVLLSN+YA AGRW ++ +VR MK + +RK PG S++++ +
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 550 HTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLA 609
H F +GD SHP+ I L + + LG+VP+ + L DV+E++K L+ HSEKLA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLA 779
Query: 610 IVFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
+ + L+++++ + IRI KNLRVC DCH AK SK+ REI++RD NRFH+ + G CSCG
Sbjct: 780 MAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCG 839
Query: 669 DYW 671
D+W
Sbjct: 840 DFW 842
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 209/448 (46%), Gaps = 70/448 (15%)
Query: 84 ARKVFDEISERNVVF-YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACS 142
A++VF+ F YN +IR Y ++ N+A+L+F M+N G PD YT+P L AC+
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 143 CSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
S G+Q+HG ++K+ +LFV N L+ Y +CG L AR V DEM R+VVSW S
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 203 MVAGYAQNMRFDDALEV-CREMDDLGQKPDAGTMASLMPAVTN----TSSDNV------- 250
M+ GYA+ DA+++ R + D P++ TM ++ A + + V
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 251 --------------LYVKDIFINLEKKSLVSW--------NVMITVYMKNSMPGNAIDLY 288
+Y+K I++ K+ + N M + Y++ + A+ ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARC 348
M S V PD I+ S + +C L +L G+ H YV R + N+LIDMY +C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 349 GCLEDAQKVFDKMKFRDVASWTSLISAYGMTG---------------------------- 380
+ A ++FD+M + V +W S+++ Y G
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 381 QGC---NALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGK-VYFKQMTDDYRITP 435
QG A+ +F MQ+ G++ D + ++I SAC H G L+ K +Y+ + ++
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQM 463
R+ LVD+ R G + A + +
Sbjct: 506 RLG--TTLVDMFSRCGDPESAMSIFNSL 531
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 216 ALEVCREMDDL----------GQKPDAGTMASLMPAVTNTSS-DNVLYVKDIFINLEK-K 263
+L+ C+ +D+L G D T+ L+ + +++ + K++F N E
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
+ +N +I Y + + AI L+L+M S + PD T L AC A G +IH
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
+ + +L ++NSL+ YA CG L+ A+KVFD+M R+V SWTS+I Y
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 384 NALALFSEM-QNSGISPDHIAFVAILSACSHSGLLEEG-KVY 423
+A+ LF M ++ ++P+ + V ++SAC+ LE G KVY
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/636 (37%), Positives = 357/636 (56%), Gaps = 35/636 (5%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+R YA G A VF ++ ++++ +N ++ S+VN+ DAL + M++ G +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T+ L AC D G LHG ++ L +N +GN L+SMYGK G + E+R VL
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV-------- 242
+MPRRDVV+WN+++ GYA++ D AL + M G + T+ S++ A
Sbjct: 422 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 243 -----------TNTSSDN-------VLYVK--------DIFINLEKKSLVSWNVMITVYM 276
SD +Y K D+F L+ +++++WN M+
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
+ + L +M V D + + L A L+ L G+++H + +
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 601
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ N+ DMY++CG + + K+ R + SW LISA G G A F EM G
Sbjct: 602 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
I P H+ FV++L+ACSH GL+++G Y+ + D+ + P IEH C++DLLGR+GR+ EA
Sbjct: 662 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 721
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKA 516
I +MP++PN+ VW +LL+SC+++ N+D G AA+NL +L PE YVL SN++A
Sbjct: 722 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 781
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKM 576
GRW++V VR M + I+K S V+L +V +F GD +HPQ+ EIY +L + +
Sbjct: 782 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 841
Query: 577 KELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCH 635
KE GYV +T AL D +EE KE +L HSE+LA+ +AL++T E S +RI KNLR+C DCH
Sbjct: 842 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCH 901
Query: 636 IAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
K +S+++GR IV+RD RFHHF+ GLCSC DYW
Sbjct: 902 SVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 205/450 (45%), Gaps = 52/450 (11%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ + G A +FD++SER+ + +N + +Y N ++ +F M +
Sbjct: 201 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 260
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ T +L D+ ++G +HG ++K+ D + V N L+ MY G +EA V
Sbjct: 261 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 320
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--------- 241
+MP +D++SWNS++A + + R DAL + M G+ + T S + A
Sbjct: 321 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 380
Query: 242 -------------VTNTSSDNVLY-----------VKDIFINLEKKSLVSWNVMITVYMK 277
N N L + + + + ++ +V+WN +I Y +
Sbjct: 381 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 440
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC---GDLSALLLGRRIHEYVERKKLRPN 334
+ P A+ + M V + IT SVL AC GDL L G+ +H Y+ +
Sbjct: 441 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESD 498
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
++NSLI MYA+CG L +Q +F+ + R++ +W ++++A G G L L S+M++
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH----FACLVDLLGRA 450
G+S D +F LSA + +LEEG Q + EH F D+ +
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEG-----QQLHGLAVKLGFEHDSFIFNAAADMYSKC 613
Query: 451 GRVDEAYDVIKQMPLEPNERV--WGTLLSS 478
G + E V+K +P N + W L+S+
Sbjct: 614 GEIGE---VVKMLPPSVNRSLPSWNILISA 640
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 221/474 (46%), Gaps = 37/474 (7%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
Y G AR +FD + RN V +N M+ V Y + + FR+M + G +P ++
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 135 PCVLKACSCSDNL-RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP 193
++ AC S ++ R G+Q+HG + K L +++V ++ +YG G + +R V +EMP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP------------- 240
R+VVSW S++ GY+ ++ +++ + M G + +M+ ++
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 241 --------------AVTNT------SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSM 280
AV N+ S NV Y IF + ++ +SWN + Y +N
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
+ ++ M + E ++ T +++L G + GR IH V + + + N+
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
L+ MYA G +A VF +M +D+ SW SL++++ G+ +AL L M +SG S +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI 460
++ F + L+AC E+G++ + +I A LV + G+ G + E+ V+
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVL 420
Query: 461 KQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYA 514
QMP + W L+ + D LAA +++ S Y ++S + A
Sbjct: 421 LQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSA 472
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 34/385 (8%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y G +RKVF+E+ +RNVV + ++ Y + + + +++ M G +
Sbjct: 100 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 159
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ V+ +C + G Q+ G ++K L+ L V N LISM G G + A Y+ D
Sbjct: 160 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 219
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--------- 241
+M RD +SWNS+ A YAQN +++ + M + ++ T+++L+
Sbjct: 220 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 279
Query: 242 -------VTNTSSDNVLYVKD-----------------IFINLEKKSLVSWNVMITVYMK 277
V D+V+ V + +F + K L+SWN ++ ++
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
+ +A+ L M S + +T S L AC GR +H V L N ++
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
N+L+ MY + G + ++++V +M RDV +W +LI Y ALA F M+ G+
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 398 SPDHIAFVAILSACSHSG-LLEEGK 421
S ++I V++LSAC G LLE GK
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGK 484
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 153/342 (44%), Gaps = 44/342 (12%)
Query: 175 MYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGT 234
MY K G + AR++ D MP R+ VSWN+M++G + + + +E R+M DLG KP +
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 235 MASLMPAVTNTS------------------------SDNVLYV----------KDIFINL 260
+ASL+ A + S +L++ + +F +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 261 EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGR 320
+++VSW ++ Y P ID+Y M V + + + V+ +CG L LGR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 321 RIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTG 380
+I V + L L +ENSLI M G ++ A +FD+M RD SW S+ +AY G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 381 QGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHF 440
+ +FS M+ + +LS H + G+ + + +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV-----VKMGFDSV 295
Query: 441 ACLVDLLGR----AGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
C+ + L R AGR EA V KQMP + + W +L++S
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 178/401 (44%), Gaps = 36/401 (8%)
Query: 7 RNISKLQALVSSF------QKSLASFQSP---------VIAVELLGKALDQYPDIIALKN 51
R++ AL+ + K+LA+FQ+ + V +L L + K
Sbjct: 426 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 485
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
+H ++ + + L+ YA CG+ +++ +F+ + RN++ +N M+ + ++
Sbjct: 486 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 545
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
+ L + +M + G D +++ L A + L G QLHG +K+ + + F+ N
Sbjct: 546 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNA 605
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
MY KCG + E +L R + SWN +++ ++ F++ EM ++G KP
Sbjct: 606 AADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 665
Query: 232 AGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYL 289
T SL+ A ++ + Y I + + + + + + S G +
Sbjct: 666 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS--GRLAEAET 723
Query: 290 QMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLI----DMY 345
+ K ++P+ + S+L +C L GR+ E + KL P ++S+ +M+
Sbjct: 724 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL--SKLEPE---DDSVYVLSSNMF 778
Query: 346 ARCGCLEDAQKVFDKMKFRDV-----ASWTSL---ISAYGM 378
A G ED + V +M F+++ SW L +S++G+
Sbjct: 779 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 819
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/631 (37%), Positives = 358/631 (56%), Gaps = 40/631 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG----- 125
L+ Y GE ARKVFD + ERNVV + +++ YV+N + A +F +M
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW 144
Query: 126 -----GFRPDNYTYPCVLKACSC------SDNLRFGLQLHGAMLKVRLD----------- 163
GF D + AC DN+ +HG + R+D
Sbjct: 145 TVMLIGFLQDGR----IDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 164 WNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM 223
++ +++ YG+ + +AR + D MP + VSW SM+ GY QN R +DA E+ M
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Query: 224 DDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGN 283
P +A + + +F ++++++ SW +I ++ +N
Sbjct: 261 ------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
A+DL++ M+K V P T S+L C L++L G+++H + R + ++ + + L+
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG-ISPDHI 402
MY +CG L ++ +FD+ +D+ W S+IS Y G G AL +F EM SG P+ +
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 403 AFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
FVA LSACS++G++EEG ++ M + + P H+AC+VD+LGRAGR +EA ++I
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 463 MPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEV 522
M +EP+ VWG+LL +CR +S +D+ A L+++ PE SG Y+LLSN+YA GRW +V
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADV 554
Query: 523 TEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGD-TSHPQSKEIYEELYVLVGKMKELGY 581
E+R LMK R +RK+PG S E+ ++VH F G SHP+ + I + L L G ++E GY
Sbjct: 555 AELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGY 614
Query: 582 VPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKL 640
P+ ALHDV+EE+K L HSE+LA+ +ALL E PIR+ KNLRVC DCH A K+
Sbjct: 615 NPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKI 674
Query: 641 ISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
ISK+ REI++RD NRFHHF++G CSC DYW
Sbjct: 675 ISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 212/512 (41%), Gaps = 116/512 (22%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVL 138
G+ ARK+FD +++ +N M+ Y N DA +F EM PD
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDR------- 77
Query: 139 KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV 198
N+ NGL+S Y K G + EAR V D MP R+VV
Sbjct: 78 --------------------------NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMDDL---------------GQKPDAGTMASLMPAVT 243
SW ++V GY N + D A + +M + G+ DA + ++P
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD 171
Query: 244 NTSSDNVLY----------VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-E 292
N + ++++ ++IF + ++S+++W M+T Y +N+ +A ++ M E
Sbjct: 172 NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 293 KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP--NLLLENSLIDMYARCGC 350
K+EV ++ L + RI + E ++ P ++ N++I + G
Sbjct: 232 KTEVSWTSM-----------LMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGE 280
Query: 351 LEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA 410
+ A++VFD MK R+ ASW ++I + G AL LF MQ G+ P ++ILS
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 411 CSHSGLLEEGKVYFKQMTD------------------------------DYRITPRIEHF 440
C+ L GK Q+ D + I +
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 441 ACLVDLLGRAGRVDEAYDVIKQMPL----EPNERVWGTLLSSCRVYSNMDIGLL---AAD 493
++ G +EA V +MPL +PNE + LS+C ++ GL + +
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEV 525
++ + P + +Y + ++ +AGR+ E E+
Sbjct: 461 SVFGVKP-ITAHYACMVDMLGRAGRFNEAMEM 491
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K VH +L+ + + LM Y CGE ++ +FD ++++ +N +I Y ++
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 110 RWYNDALLVFREM-VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
+AL VF EM ++G +P+ T+ L ACS + + GL+++ +M V +
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 169 GNG-LISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEVC 220
++ M G+ G EA ++D M D W S++ + + D A E C
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA-EFC 523
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/656 (35%), Positives = 366/656 (55%), Gaps = 34/656 (5%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H L N + L+ YA C + TA F E NVV +NVM+ +Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
++ +FR+M P+ YTYP +LK C +L G Q+H ++K N +V
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ LI MY K G L A +L +DVVSW +M+AGY Q D AL R+M D G +
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 230 PDAGTMASLMPA------------------VTNTSSD----NVLY--------VKDIFIN 259
D + + + A V+ SSD N L +++ ++
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA 648
Query: 260 LEKKSL---VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSAL 316
E+ ++WN +++ + ++ A+ ++++M + ++ + T S + A + + +
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 317 LLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAY 376
G+++H + + + N+LI MYA+CG + DA+K F ++ ++ SW ++I+AY
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
G G AL F +M +S + P+H+ V +LSACSH GL+++G YF+ M +Y ++P+
Sbjct: 769 SKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPK 828
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL 496
EH+ C+VD+L RAG + A + I++MP++P+ VW TLLS+C V+ NM+IG AA +LL
Sbjct: 829 PEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL 888
Query: 497 QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGD 556
+L PE S YVLLSN+YA + +W R MK + ++K PG S +E+ + +H+F GD
Sbjct: 889 ELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGD 948
Query: 557 TSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLN 616
+HP + EI+E L + E+GYV + S L++++ E K+ + +HSEKLAI F LL+
Sbjct: 949 QNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLS 1008
Query: 617 THES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+ PI + KNLRVC DCH K +SK+ REI++RD RFHHF+ G CSC DYW
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 224/474 (47%), Gaps = 35/474 (7%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
++ +H +++Y ++ + L+ Y+ G AR+VFD + ++ + MI
Sbjct: 206 VEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
N +A+ +F +M G P Y + VL AC ++L G QLHG +LK+ + +V
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
N L+S+Y G L+ A ++ M +RD V++N+++ G +Q + A+E+ + M G
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 229 KPDAGTMASLMPAVT------------------NTSSDNV-------LYVK--------D 255
+PD+ T+ASL+ A + +S+N LY K D
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
F+ E +++V WNVM+ Y N+ ++ QM+ E+ P+ T S+L C L
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L LG +IH + + + N + + LIDMYA+ G L+ A + + +DV SWT++I+
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
Y AL F +M + GI D + +SAC+ L+EG+ Q +
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSS 624
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
+ LV L R G+++E+Y +Q N W L+S + N + L
Sbjct: 625 DLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGNNEEAL 677
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 225/484 (46%), Gaps = 42/484 (8%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H++++ L N L KL Y G+ A KVFDE+ ER + +N MI+ +
Sbjct: 105 RKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASR 164
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGL--QLHGAMLKVRLDWNLF 167
+ +F MV+ P+ T+ VL+AC ++ F + Q+H +L L +
Sbjct: 165 NLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR-GGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
V N LI +Y + G + AR V D + +D SW +M++G ++N +A+ + +M LG
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLG 283
Query: 228 QKPDAGTMASLMPAVTNT------------------SSD---------------NVLYVK 254
P +S++ A SSD N++ +
Sbjct: 284 IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAE 343
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
IF N+ ++ V++N +I + A++L+ +M +EPD+ T AS++ AC
Sbjct: 344 HIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADG 403
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
L G+++H Y + N +E +L+++YA+C +E A F + + +V W ++
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
AYG+ N+ +F +MQ I P+ + +IL C G LE G+ Q+ +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII---KTN 520
Query: 435 PRIEHFAC--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAA 492
++ + C L+D+ + G++D A+D++ + + W T+++ Y+ D L
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTF 579
Query: 493 DNLL 496
+L
Sbjct: 580 RQML 583
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 193/464 (41%), Gaps = 69/464 (14%)
Query: 124 NGGFRPDNYTYPCVLKAC-SCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCL 182
N G RP++ T +L+ C + +L G +LH +LK+ LD N + L Y G L
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 183 LEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
A V DEMP R + +WN M+ A + + M P+ GT + ++ A
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
Query: 243 TNTS------------------SDNV--------LYVKDIFINLEK--------KSLVSW 268
S D+ LY ++ F++L + K SW
Sbjct: 197 RGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
MI+ KN AI L+ M + P +SVL AC + +L +G ++H V +
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
+ + N+L+ +Y G L A+ +F M RD ++ +LI+ G G A+ L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD------------------- 429
F M G+ PD +++ ACS G L G+ T
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 430 --------DYRITPRIEHFACLVDLLGRAGRVDE---AYDVIKQMPLE---PNERVWGTL 475
DY + +E+ +L G +D+ ++ + +QM +E PN+ + ++
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 476 LSSCRVYSNMDIGLLAADNLLQLSPEQSGYYV-LLSNIYAKAGR 518
L +C ++++G +++ + + + Y +L ++YAK G+
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 14 ALVSSFQKSLASFQSPVIAVEL-----------LG---KALDQYPDIIALKNVHTKLIYL 59
ALVS FQ+S + ++ + V + G KA + ++ K VH +
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 60 NSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVF 119
+ L+ YA CG A K F E+S +N V +N +I +Y + + ++AL F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 120 REMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM-----LKVRLDWNLFVGNGLIS 174
+M++ RP++ T VL ACS + G+ +M L + + + V +
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV----VD 837
Query: 175 MYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAG 206
M + G L A+ + EMP + D + W ++++
Sbjct: 838 MLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 25/218 (11%)
Query: 272 ITVYMKN--SMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL-LGRRIHEYVER 328
I+VY+ S ID +E + P+ T +L C + L GR++H + +
Sbjct: 57 ISVYISEDESFQEKRID---SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILK 113
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
L N L L D Y G L A KVFD+M R + +W +I L
Sbjct: 114 LGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGL 173
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH-------FA 441
F M + ++P+ F +L AC G V F + +I RI +
Sbjct: 174 FVRMVSENVTPNEGTFSGVLEAC------RGGSVAFDVVE---QIHARILYQGLRDSTVV 224
Query: 442 C--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
C L+DL R G VD A V + L+ + W ++S
Sbjct: 225 CNPLIDLYSRNGFVDLARRVFDGLRLKDHSS-WVAMIS 261
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/720 (35%), Positives = 389/720 (54%), Gaps = 55/720 (7%)
Query: 7 RNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQ--YPDIIAL--------------- 49
RN+ +++ F + S +S ++ E++ + D PD+ L
Sbjct: 251 RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 310
Query: 50 -KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
K VH + L + L LM Y+ CG A+ +F + +NVV +N M+ +
Sbjct: 311 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 370
Query: 109 NRWYNDALLVFREMVNGG--FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL 166
+ V R+M+ GG + D T + C L +LH LK +N
Sbjct: 371 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 430
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
V N ++ Y KCG L A+ V + + V SWN+++ G+AQ+ +L+ +M
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 227 GQKPDAGTMASLMPAVTNTSS------------------DNVLY---------------V 253
G PD+ T+ SL+ A + S D +Y V
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 254 KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+ +F +E KSLVSWN +IT Y++N P A+ ++ QM ++ I+ V AC L
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 610
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
+L LGR H Y + L + + SLIDMYA+ G + + KVF+ +K + ASW ++I
Sbjct: 611 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
YG+ G A+ LF EMQ +G +PD + F+ +L+AC+HSGL+ EG Y QM + +
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVI-KQMPLEPNERVWGTLLSSCRVYSNMDIGLLAA 492
P ++H+AC++D+LGRAG++D+A V+ ++M E + +W +LLSSCR++ N+++G A
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 493 DNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF 552
L +L PE+ YVLLSN+YA G+W++V +VR M +RK G S +ELN +V +F
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 850
Query: 553 LAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVF 612
+ G+ +EI +L K+ ++GY P+T S HD+ EE+K L HSEKLA+ +
Sbjct: 851 VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 910
Query: 613 ALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
L+ T E + IR+ KNLR+C DCH AAKLISK++ REIV+RD RFHHFK+G+CSCGDYW
Sbjct: 911 GLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 218/458 (47%), Gaps = 41/458 (8%)
Query: 5 LSRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHEN 64
L ++ +Q V + S +F A+ LL +A + DI + +H + N
Sbjct: 59 LDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRN 118
Query: 65 PS-LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
L +++ YA CG P +R VFD + +N+ +N +I SY N Y++ L F EM+
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 124 NG-GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCL 182
+ PD++TYPCV+KAC+ ++ GL +HG ++K L ++FVGN L+S YG G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 183 LEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL----EVCREMDDLGQKPDAGTMASL 238
+A + D MP R++VSWNSM+ ++ N +++ E+ E D PD T+ ++
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 239 MPAVTNTSS----------------DNVLYVKDIFINL-----------------EKKSL 265
+P D L + + +++ K++
Sbjct: 299 LPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNV 358
Query: 266 VSWNVMITVYMKNSMPGNAIDLYLQM--EKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
VSWN M+ + D+ QM +V+ D +T + +P C S L + +H
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELH 418
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
Y +++ N L+ N+ + YA+CG L AQ+VF ++ + V SW +LI + +
Sbjct: 419 CYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPR 478
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
+L +M+ SG+ PD ++LSACS L GK
Sbjct: 479 LSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 306 VLPACGDLSALLLGRRIHEYVE-RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
+L A G + +GR+IH+ V +LR + +L +I MYA CG +D++ VFD ++ +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 365 DVASWTSLISAYGMTGQGCNALALFSEM-QNSGISPDHIAFVAILSACSHS-----GLLE 418
++ W ++IS+Y L F EM + + PDH + ++ AC+ GL
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 419 EGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
G V + +D + LV G G V +A + MP E N W +++
Sbjct: 210 HGLVVKTGLVEDVFVGN------ALVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI-- 260
Query: 479 CRVYSN 484
RV+S+
Sbjct: 261 -RVFSD 265
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/663 (36%), Positives = 371/663 (55%), Gaps = 42/663 (6%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VH L+ S N L+ Y C EP A KVFD + ERNVV ++ ++ +V N
Sbjct: 27 QVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNG 86
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+L +F EM G P+ +T+ LKAC + L GLQ+HG LK+ + + VGN
Sbjct: 87 DLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 146
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD--LGQ 228
L+ MY KCG + EA V + R ++SWN+M+AG+ AL+ M + + +
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 229 KPDAGTMASLMPAVTNT---------------------SSDNV------LYVK------- 254
+PD T+ SL+ A ++T SS + LYVK
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 255 -DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
F +++K+++SW+ +I Y + A+ L+ ++++ + D+ +S++ D
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
+ L G+++ + + NS++DMY +CG +++A+K F +M+ +DV SWT +I
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
+ YG G G ++ +F EM I PD + ++A+LSACSHSG+++EG+ F ++ + + I
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGI 446
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAAD 493
PR+EH+AC+VDLLGRAGR+ EA +I MP++PN +W TLLS CRV+ ++++G
Sbjct: 447 KPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGK 506
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFL 553
LL++ + YV++SN+Y +AG W E R L + ++K G+S VE+ +VH F
Sbjct: 507 ILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFR 566
Query: 554 AGDTSHPQSKEIYEELYVLVGKMK-ELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVF 612
+G+ SHP + I E L +++ ELGYV LHD+++E KE +L HSEKLAI
Sbjct: 567 SGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGL 626
Query: 613 AL----LNTHESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
AL LN IR+ KNLRVC DCH K +SKI V+RD RFH F+DG CSCG
Sbjct: 627 ALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCG 686
Query: 669 DYW 671
DYW
Sbjct: 687 DYW 689
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
S+L C G ++H Y+ + NL+ N LIDMY +C A KVFD M R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 365 DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG---- 420
+V SW++L+S + + G +L+LFSEM GI P+ F L AC LE+G
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 421 ----KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
K+ F+ M +E LVD+ + GR++EA V +++
Sbjct: 131 GFCLKIGFEMM---------VEVGNSLVDMYSKCGRINEAEKVFRRI 168
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/660 (36%), Positives = 365/660 (55%), Gaps = 38/660 (5%)
Query: 50 KNVHTKLIYLNSHENPSLGIK---LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSY 106
+++H LI N + L+ Y C E ARK+FD + ERNVV + M++ Y
Sbjct: 51 ESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGY 110
Query: 107 VNNRWYNDALLVFREMV-NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN 165
N+ + + L +F+ M +G RP+ + V K+CS S + G Q HG LK L +
Sbjct: 111 QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISH 170
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
FV N L+ MY C EA VLD++P D+ ++S ++GY + F + L+V R+ +
Sbjct: 171 EFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTAN 230
Query: 226 LGQKPDAGTMASLMPAVTNTSSDN---------------------------------VLY 252
+ T S + +N N VLY
Sbjct: 231 EDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLY 290
Query: 253 VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+ +F + +++ ++ Y ++ A++L+ +M+ EV P+ T A +L + +
Sbjct: 291 AQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAE 350
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
LS L G +H V + R ++++ N+L++MYA+ G +EDA+K F M FRD+ +W ++
Sbjct: 351 LSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTM 410
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
IS G G AL F M +G P+ I F+ +L ACSH G +E+G YF Q+ +
Sbjct: 411 ISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFD 470
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAA 492
+ P I+H+ C+V LL +AG +A D ++ P+E + W TLL++C V N +G A
Sbjct: 471 VQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVA 530
Query: 493 DNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF 552
+ ++ P SG YVLLSNI+AK+ W+ V +VRSLM R ++K PG+S + + +Q H F
Sbjct: 531 EYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVF 590
Query: 553 LAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVF 612
LA D HP+ IY ++ ++ K+K LGY P+ A HDV+EE +E +L+ HSEKLA+ +
Sbjct: 591 LAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAY 650
Query: 613 ALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
L+ T E SP+ +TKN+R+C DCH A KLISKI R IVIRD+NRFHHF DG CSC DYW
Sbjct: 651 GLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 166/384 (43%), Gaps = 47/384 (12%)
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDW---NLFVGNGLISMYGKCGCLLEARYVLDEMP 193
+LK C+ S LR G +H ++ + + N LI++Y KC + AR + D MP
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 194 RRDVVSWNSMVAGYAQNMRFD-DALEVCREMDDLGQ-KPDAGTMASLMPAVTNTSSDNVL 251
R+VVSW +M+ GY QN FD + L++ + M G+ +P+ + + +N S +
Sbjct: 97 ERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSN--SGRIE 153
Query: 252 YVKDIFINLEKKSLVSW----NVMITVYMKNSMPGNAI---------------------- 285
K K L+S N ++ +Y S G AI
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 286 ---------DLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
D+ + + + +T S L +L L L ++H + R +
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+LI+MY +CG + AQ+VFD +++ T+++ AY AL LFS+M
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFK-QMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
+ P+ F +L++ + LL++G + + YR + + LV++ ++G +++
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN--ALVNMYAKSGSIED 391
Query: 456 AYDVIKQMPLEPNERVWGTLLSSC 479
A M + W T++S C
Sbjct: 392 ARKAFSGMTFR-DIVTWNTMISGC 414
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 432 bits (1111), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/602 (37%), Positives = 350/602 (58%), Gaps = 39/602 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y C A+++FDE N+ N M +YV +AL VF M++ G RPD
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPD 336
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ + +CS N+ +G HG +L+ + + N LI MY KC A + D
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
M + VV+WNS+VAGY +N D A E
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWET------------------------------- 425
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITCASVLPA 309
F + +K++VSWN +I+ ++ S+ AI+++ M+ E V D +T S+ A
Sbjct: 426 ------FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASA 479
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
CG L AL L + I+ Y+E+ ++ ++ L +L+DM++RCG E A +F+ + RDV++W
Sbjct: 480 CGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
T+ I A M G A+ LF +M G+ PD +AFV L+ACSH GL+++GK F M
Sbjct: 540 TAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLK 599
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
+ ++P H+ C+VDLLGRAG ++EA +I+ MP+EPN+ +W +LL++CRV N+++
Sbjct: 600 LHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV 549
AA+ + L+PE++G YVLLSN+YA AGRW ++ +VR MK + +RK PG S++++ +
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 550 HTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLA 609
H F +GD SHP+ I L + + LG+VP+ + L DV+E++K L+ HSEKLA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLA 779
Query: 610 IVFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
+ + L+++++ + IRI KNLRVC DCH AK SK+ REI++RD NRFH+ + G CSCG
Sbjct: 780 MAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCG 839
Query: 669 DY 670
D+
Sbjct: 840 DF 841
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 209/448 (46%), Gaps = 70/448 (15%)
Query: 84 ARKVFDEISERNVVF-YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACS 142
A++VF+ F YN +IR Y ++ N+A+L+F M+N G PD YT+P L AC+
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 143 CSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
S G+Q+HG ++K+ +LFV N L+ Y +CG L AR V DEM R+VVSW S
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 203 MVAGYAQNMRFDDALEV-CREMDDLGQKPDAGTMASLMPAVTN----TSSDNV------- 250
M+ GYA+ DA+++ R + D P++ TM ++ A + + V
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 251 --------------LYVKDIFINLEKKSLVSW--------NVMITVYMKNSMPGNAIDLY 288
+Y+K I++ K+ + N M + Y++ + A+ ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARC 348
M S V PD I+ S + +C L +L G+ H YV R + N+LIDMY +C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 349 GCLEDAQKVFDKMKFRDVASWTSLISAYGMTG---------------------------- 380
+ A ++FD+M + V +W S+++ Y G
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 381 QGC---NALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGK-VYFKQMTDDYRITP 435
QG A+ +F MQ+ G++ D + ++I SAC H G L+ K +Y+ + ++
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDV 505
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQM 463
R+ LVD+ R G + A + +
Sbjct: 506 RLG--TTLVDMFSRCGDPESAMSIFNSL 531
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 114/222 (51%), Gaps = 14/222 (6%)
Query: 216 ALEVCREMDDL----------GQKPDAGTMASLMPAVTNTSS-DNVLYVKDIFINLEK-K 263
+L+ C+ +D+L G D T+ L+ + +++ + K++F N E
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
+ +N +I Y + + AI L+L+M S + PD T L AC A G +IH
Sbjct: 98 TCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIH 157
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
+ + +L ++NSL+ YA CG L+ A+KVFD+M R+V SWTS+I Y
Sbjct: 158 GLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAK 217
Query: 384 NALALFSEM-QNSGISPDHIAFVAILSACSHSGLLEEG-KVY 423
+A+ LF M ++ ++P+ + V ++SAC+ LE G KVY
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/576 (38%), Positives = 340/576 (59%), Gaps = 36/576 (6%)
Query: 123 VNGGFRP-DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGC 181
+ G + P D Y +LK C+ L G +H +L+ ++ +GN L++MY KCG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 182 LLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
L EAR V ++MP+RD V+W ++++GY+Q+ R DAL +M G P+ T++S++ A
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 242 VT----------------NTSSDNVLYVKD-----------------IFINLEKKSLVSW 268
D+ ++V +F LE ++ VSW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N +I + + S A++L+ M + P + AS+ AC L G+ +H Y+ +
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
+ N+L+DMYA+ G + DA+K+FD++ RDV SW SL++AY G G A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
F EM+ GI P+ I+F+++L+ACSHSGLL+EG Y++ M D I P H+ +VDLLG
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 449 RAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVL 508
RAG ++ A I++MP+EP +W LL++CR++ N ++G AA+++ +L P+ G +V+
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 509 LSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEE 568
L NIYA GRW + VR MK ++K P S VE+ + +H F+A D HPQ +EI +
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529
Query: 569 LYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKN 627
++ K+KELGYVP+T + V+++++E +L HSEK+A+ FALLNT S I I KN
Sbjct: 530 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 589
Query: 628 LRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDG 663
+RVCGDCH A KL SK+VGREI++RDTNRFHHFKD
Sbjct: 590 IRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 177/367 (48%), Gaps = 34/367 (9%)
Query: 46 IIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRS 105
+I + VH ++ + +G L+ YA CG ARKVF+++ +R+ V + +I
Sbjct: 76 LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISG 135
Query: 106 YVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN 165
Y + DALL F +M+ G+ P+ +T V+KA + G QLHG +K D N
Sbjct: 136 YSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 195
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
+ VG+ L+ +Y + G + +A+ V D + R+ VSWN+++AG+A+ + ALE+ + M
Sbjct: 196 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR 255
Query: 226 LGQKPDAGTMASLMPAVTNTS---------------------------------SDNVLY 252
G +P + ASL A ++T S ++
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 315
Query: 253 VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+ IF L K+ +VSWN ++T Y ++ A+ + +M + + P+ I+ SVL AC
Sbjct: 316 ARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WTS 371
L G +E +++ + P +++D+ R G L A + ++M A+ W +
Sbjct: 376 SGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKA 435
Query: 372 LISAYGM 378
L++A M
Sbjct: 436 LLNACRM 442
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/595 (40%), Positives = 341/595 (57%), Gaps = 57/595 (9%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A ++FDEI E + YN+M+ YV N + A F M K +
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP--------------FKDAAS 157
Query: 144 SDNLRFGLQLHGAMLKVR------LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV 197
+ + G G M K R ++ N N +IS Y +CG L +A + P R V
Sbjct: 158 WNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGV 217
Query: 198 VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIF 257
V+W +M+ GY + + +E+ M KD+
Sbjct: 218 VAWTAMITGYMKAKK----VELAEAM-----------------------------FKDMT 244
Query: 258 INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
+N K+LV+WN MI+ Y++NS P + + L+ M + + P++ +S L C +LSAL
Sbjct: 245 VN---KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
LGR+IH+ V + L ++ SLI MY +CG L DA K+F+ MK +DV +W ++IS Y
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRI 437
G AL LF EM ++ I PD I FVA+L AC+H+GL+ G YF+ M DY++ P+
Sbjct: 362 QHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQP 421
Query: 438 EHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ 497
+H+ C+VDLLGRAG+++EA +I+ MP P+ V+GTLL +CRV+ N+++ AA+ LLQ
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQ 481
Query: 498 LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDT 557
L+ + + YV L+NIYA RW++V VR MK + K PG S +E+ ++VH F + D
Sbjct: 482 LNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDR 541
Query: 558 SHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNT 617
HP+ I+++L L KMK GY PE + ALH+VEEE KE L HSEKLA+ F +
Sbjct: 542 IHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKL 601
Query: 618 HE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+ S I++ KNLR+CGDCH A K IS+I REI++RDT RFHHFKDG CSCGDYW
Sbjct: 602 PQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 142/328 (43%), Gaps = 20/328 (6%)
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN-MRFDDALEVCREM 223
+F N +I+ + G + A V M ++ ++WNS++ G +++ R +A ++ E+
Sbjct: 60 QIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 224 DDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGN 283
P+ T + + + N + F + K SWN MIT Y +
Sbjct: 120 ------PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEK 173
Query: 284 AIDL-YLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLI 342
A +L Y MEK+EV +A+ + CGDL + + + +R ++ ++I
Sbjct: 174 ARELFYSMMEKNEVSWNAMISGYI--ECGDLE------KASHFFKVAPVR-GVVAWTAMI 224
Query: 343 DMYARCGCLEDAQKVFDKMKF-RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
Y + +E A+ +F M +++ +W ++IS Y + + L LF M GI P+
Sbjct: 225 TGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
+ L CS L+ G+ Q+ + + L+ + + G + +A+ + +
Sbjct: 285 SGLSSALLGCSELSALQLGR-QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE 343
Query: 462 QMPLEPNERVWGTLLSSCRVYSNMDIGL 489
M + + W ++S + N D L
Sbjct: 344 VMK-KKDVVAWNAMISGYAQHGNADKAL 370
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/528 (39%), Positives = 329/528 (62%), Gaps = 36/528 (6%)
Query: 180 GCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
G + AR V DEM + + WN++ GY +N ++L + ++M DLG +PD T ++
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 240 PAVTNTSSDN-------------------------VLYVKD--------IFINLEKKSLV 266
A++ + ++Y+K +F +++ K LV
Sbjct: 117 KAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLV 176
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
+WN + V ++ A++ + +M V+ D+ T S+L ACG L +L +G I++
Sbjct: 177 AWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRA 236
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNAL 386
++++ N+++EN+ +DM+ +CG E A+ +F++MK R+V SW+++I Y M G AL
Sbjct: 237 RKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREAL 296
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM--TDDYRITPRIEHFACLV 444
LF+ MQN G+ P+++ F+ +LSACSH+GL+ EGK YF M ++D + PR EH+AC+V
Sbjct: 297 TLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMV 356
Query: 445 DLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSG 504
DLLGR+G ++EAY+ IK+MP+EP+ +WG LL +C V+ +M +G AD L++ +P+
Sbjct: 357 DLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGS 416
Query: 505 YYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKE 564
Y+VLLSNIYA AG+W V +VRS M++ +K S+VE ++H F GD SHPQSK
Sbjct: 417 YHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKA 476
Query: 565 IYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES-PIR 623
IYE+L ++ K++++GYVP+T S HDVE E+KE L+ HSEKLAI F L+ PIR
Sbjct: 477 IYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIR 536
Query: 624 ITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+ KNLR C DCH +K +S + EI++RD NRFHHF++G+CSC ++W
Sbjct: 537 VMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 164/364 (45%), Gaps = 37/364 (10%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
LK +H ++ E SL +L+ G+ AR+VFDE+ + + +N + + YV
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
N+ ++LL++++M + G RPD +TYP V+KA S + G LH ++K V
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIV 146
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
L+ MY K G L A ++ + M +D+V+WN+ +A Q ALE +M
Sbjct: 147 ATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 229 KPDAGTMASLMPA---------------------------VTNTSSD------NVLYVKD 255
+ D+ T+ S++ A V N D N +
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+F ++++++VSW+ MI Y N A+ L+ M+ + P+ +T VL AC
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 316 LLLGRRIHEYVER---KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTS 371
+ G+R + + K L P ++D+ R G LE+A + KM D W +
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 372 LISA 375
L+ A
Sbjct: 387 LLGA 390
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/418 (48%), Positives = 283/418 (67%), Gaps = 2/418 (0%)
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+F + +K LV+WN +I + +N P A+ LY +M ++PD T S+L AC + A
Sbjct: 45 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 104
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L LG+R+H Y+ + L NL N L+D+YARCG +E+A+ +FD+M ++ SWTSLI
Sbjct: 105 LTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG 164
Query: 376 YGMTGQGCNALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
+ G G A+ LF M+++ G+ P I FV IL ACSH G+++EG YF++M ++Y+I
Sbjct: 165 LAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIE 224
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
PRIEHF C+VDLL RAG+V +AY+ IK MP++PN +W TLL +C V+ + D+ A
Sbjct: 225 PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQ 284
Query: 495 LLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLA 554
+LQL P SG YVLLSN+YA RW +V ++R M R ++K PG S VE+ ++VH FL
Sbjct: 285 ILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLM 344
Query: 555 GDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFAL 614
GD SHPQS IY +L + G+++ GYVP+ + DVEEE+KE + HSEK+AI F L
Sbjct: 345 GDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFML 404
Query: 615 LNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
++T E SPI + KNLRVC DCH+A KL+SK+ REIV+RD +RFHHFK+G CSC DYW
Sbjct: 405 ISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 44/303 (14%)
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
++R G +H +++ ++V N L+ +Y CG + A V D+MP +D+V+WNS++
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 206 GYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT---------------------- 243
G+A+N + ++AL + EM+ G KPD T+ SL+ A
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 244 NTSSDNVLY-----------VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQME 292
N S NVL K +F + K+ VSW +I N AI+L+ ME
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 293 KSE-VEPDAITCASVLPACGDLSALLLG----RRIHEYVERKKLRPNLLLENSLIDMYAR 347
+E + P IT +L AC + G RR+ E K+ P + ++D+ AR
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR---EEYKIEPRIEHFGCMVDLLAR 239
Query: 348 CGCLEDAQKVFDKMKFR-DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVA 406
G ++ A + M + +V W +L+ A T G + LA F+ +Q + P+H
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGA--CTVHGDSDLAEFARIQILQLEPNHSGDYV 297
Query: 407 ILS 409
+LS
Sbjct: 298 LLS 300
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 150/303 (49%), Gaps = 17/303 (5%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ YA CG+ +A KVFD++ E+++V +N +I + N +AL ++ EM + G +PD
Sbjct: 29 LLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 88
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+T +L AC+ L G ++H M+KV L NL N L+ +Y +CG + EA+ + D
Sbjct: 89 GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD 148
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL-GQKPDAGTMASLMPAVTNTS--S 247
EM ++ VSW S++ G A N +A+E+ + M+ G P T ++ A ++
Sbjct: 149 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 248 DNVLYVKDIFINLEKKSLVS-WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
+ Y + + + + + + M+ + + G Y ++ ++P+ + ++
Sbjct: 209 EGFEYFRRMREEYKIEPRIEHFGCMVDLLAR---AGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 307 LPAC---GDLSALLLGRRIHEYVERKKLRPNLLLENSLI-DMYARCGCLEDAQKVFDKMK 362
L AC GD R ++ +L PN + L+ +MYA D QK+ +M
Sbjct: 266 LGACTVHGDSDLAEFAR-----IQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM- 319
Query: 363 FRD 365
RD
Sbjct: 320 LRD 322
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
LG IH V R + ++NSL+ +YA CG + A KVFDKM +D+ +W S+I+ +
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK---VYFKQMTDDYRIT 434
G+ ALAL++EM + GI PD V++LSAC+ G L GK VY ++ +T
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG----LT 121
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
+ L+DL R GRV+EA + +M ++ N W +L+
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/592 (39%), Positives = 350/592 (59%), Gaps = 10/592 (1%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGF-RPDNYTYPCVLKACS 142
AR++ E + +N ++R Y + ++++ VF EM+ GF PD++++ V+KA
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 143 CSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
+LR G Q+H LK L+ +LFVG LI MYG CGC+ AR V DEM + ++V+WN+
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 203 MVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK 262
++ + A E+ +M +A + A S+ K IF +
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESA------KRIFSEMPH 231
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
+ VSW+ MI N + + +++++ + P+ ++ VL AC + G+ +
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK-FRDVASWTSLISAYGMTGQ 381
H +VE+ + + N+LIDMY+RCG + A+ VF+ M+ R + SWTS+I+ M GQ
Sbjct: 292 HGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ 351
Query: 382 GCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA 441
G A+ LF+EM G++PD I+F+++L ACSH+GL+EEG+ YF +M Y I P IEH+
Sbjct: 352 GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 411
Query: 442 CLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPE 501
C+VDL GR+G++ +AYD I QMP+ P VW TLL +C + N+++ L +L P
Sbjct: 412 CMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPN 471
Query: 502 QSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQ 561
SG VLLSN YA AG+WK+V +R M +RI+KT S VE+ ++ F AG+
Sbjct: 472 NSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGI 531
Query: 562 SKEIYEELYVLVGKMK-ELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES 620
E +E+L ++ ++K E GY PE SAL+DVEEE+KE ++ HSEKLA+ FAL +
Sbjct: 532 DIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKG 591
Query: 621 P-IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
IRI KNLR+C DCH KL SK+ G EI++RD NRFH FKDG CSC DYW
Sbjct: 592 ANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 29/340 (8%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
D+ + + K++ N H + ++ ++ Y GE +A+++F E+ R+ V ++ MI
Sbjct: 187 DVAGAREIFDKMLVRN-HTSWNV---MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIV 242
Query: 105 SYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
+N +N++ L FRE+ G P+ + VL ACS S + FG LHG + K W
Sbjct: 243 GIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSW 302
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEM-PRRDVVSWNSMVAGYAQNMRFDDALEVCREM 223
+ V N LI MY +CG + AR V + M +R +VSW SM+AG A + + ++A+ + EM
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 224 DDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK-----KSLVSWNVMITVYMKN 278
G PD + SL+ A ++ + +D F +++ + + M+ +Y ++
Sbjct: 363 TAYGVTPDGISFISLLHACSHAGL--IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRS 420
Query: 279 SMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN---- 334
A D QM + P AI ++L AC + L ++ + + +L PN
Sbjct: 421 GKLQKAYDFICQM---PIPPTAIVWRTLLGACSSHGNIELAEQVKQRL--NELDPNNSGD 475
Query: 335 -LLLENSLIDMYARCGCLEDAQKVFDKM---KFRDVASWT 370
+LL N+ YA G +D + M + + +W+
Sbjct: 476 LVLLSNA----YATAGKWKDVASIRKSMIVQRIKKTTAWS 511
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 177/398 (44%), Gaps = 20/398 (5%)
Query: 142 SCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLI--SMYGKCGCLLEARYVLDEMPRRDVVS 199
SC NLR Q+HG +K +D + + LI L AR +L P D
Sbjct: 14 SCK-NLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFM 72
Query: 200 WNSMVAGYAQNMRFDDALEVCREMDDLG-QKPDAGTMASLMPAVTNTSSDNV---LYVKD 255
+N++V GY+++ +++ V EM G PD+ + A ++ AV N S ++ +
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+ LE V +I +Y A ++ +M +P+ + +V+ AC +
Sbjct: 133 LKHGLESHLFVG-TTLIGMYGGCGCVEFARKVFDEMH----QPNLVAWNAVITACFRGND 187
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
+ R I + K L N N ++ Y + G LE A+++F +M RD SW+++I
Sbjct: 188 VAGAREIFD----KMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVG 243
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
G + F E+Q +G+SP+ ++ +LSACS SG E GK+ + +
Sbjct: 244 IAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI-LHGFVEKAGYSW 302
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMD--IGLLAAD 493
+ L+D+ R G V A V + M + W ++++ ++ + + L
Sbjct: 303 IVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM 362
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR 531
++P+ + LL + + AG +E + S MKR
Sbjct: 363 TAYGVTPDGISFISLL-HACSHAGLIEEGEDYFSEMKR 399
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/583 (38%), Positives = 340/583 (58%), Gaps = 40/583 (6%)
Query: 129 PDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
P TY ++ C +L L++H +L D + F+ LI MY G + AR V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA-VTNTSS 247
D+ +R + WN++ ++ L + +M+ +G + D T ++ A V + +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 248 DNVL------------------------------------YVKDIFINLEKKSLVSWNVM 271
N L Y +F + +++VSW+ M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 272 ITVYMKNSMPGNAIDLYLQM--EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
I Y KN A+ + +M E + P+++T SVL AC L+AL G+ IH Y+ R+
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
L L + ++L+ MY RCG LE Q+VFD+M RDV SW SLIS+YG+ G G A+ +F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
EM +G SP + FV++L ACSH GL+EEGK F+ M D+ I P+IEH+AC+VDLLGR
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
A R+DEA +++ M EP +VWG+LL SCR++ N+++ A+ L L P+ +G YVLL
Sbjct: 435 ANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLL 494
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
++IYA+A W EV V+ L++ R ++K PG +E+ ++++F++ D +P ++I+ L
Sbjct: 495 ADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFL 554
Query: 570 YVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES-PIRITKNL 628
L MKE GY+P+T L+++E E+KE + HSEKLA+ F L+NT + PIRITKNL
Sbjct: 555 VKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNL 614
Query: 629 RVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
R+C DCH+ K ISK + +EI++RD NRFH FK+G+CSCGDYW
Sbjct: 615 RLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 175/370 (47%), Gaps = 41/370 (11%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
VH ++ S ++P L KL+ Y+ G ARKVFD+ +R + +N + R+
Sbjct: 99 VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGH 158
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSD----NLRFGLQLHGAMLKVRLDWNLF 167
+ L ++ +M G D +TY VLKAC S+ +L G ++H + + +++
Sbjct: 159 GEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVY 218
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM--DD 225
+ L+ MY + GC+ A YV MP R+VVSW++M+A YA+N + +AL REM +
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 226 LGQKPDAGTMASLMPAVTNTSS----------------DNVLYV---------------- 253
P++ TM S++ A + ++ D++L V
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 254 -KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+ +F + + +VSWN +I+ Y + AI ++ +M + P +T SVL AC
Sbjct: 339 GQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSH 398
Query: 313 LSALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WT 370
+ G+R+ E + R ++P + ++D+ R L++A K+ M+ W
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWG 458
Query: 371 SLISAYGMTG 380
SL+ + + G
Sbjct: 459 SLLGSCRIHG 468
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 167/371 (45%), Gaps = 23/371 (6%)
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
+++ + N+ LK SCS L GA K+ N LI K G
Sbjct: 8 QVIQPTYHTVNFLPRSPLKPPSCSVALNNPSISSGAGAKIS-------NNQLIQSLCKEG 60
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
L +A VL + ++ ++ DAL V R + D G D L+
Sbjct: 61 KLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIG 120
Query: 241 AVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
++ S V Y + +F K+++ WN + + LY +M + VE D
Sbjct: 121 MYSDLGS--VDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178
Query: 301 ITCASVLPAC----GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
T VL AC ++ L+ G+ IH ++ R+ ++ + +L+DMYAR GC++ A
Sbjct: 179 FTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASY 238
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM--QNSGISPDHIAFVAILSACSHS 414
VF M R+V SW+++I+ Y G+ AL F EM + SP+ + V++L AC+
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 415 GLLEEGKV---YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERV 471
LE+GK+ Y + D I P I + LV + GR G+++ V +M + +
Sbjct: 299 AALEQGKLIHGYILRRGLD-SILPVI---SALVTMYGRCGKLEVGQRVFDRMH-DRDVVS 353
Query: 472 WGTLLSSCRVY 482
W +L+SS V+
Sbjct: 354 WNSLISSYGVH 364
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H L + + L+ YA G A VF + RNVV ++ MI Y N
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261
Query: 110 RWYNDALLVFREMV--NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
+AL FREM+ P++ T VL+AC+ L G +HG +L+ LD L
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP 321
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
V + L++MYG+CG L + V D M RDVVSWNS+++ Y + A+++ EM G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 228 QKPDAGTMASLMPAVTN 244
P T S++ A ++
Sbjct: 382 ASPTPVTFVSVLGACSH 398
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 16/169 (9%)
Query: 7 RNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPS 66
RN+ A+++ + K+ +F++ E++ + D P+ + + +V L + E
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 67 L--GIKLMRA--------------YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
L G L R Y CG+ ++VFD + +R+VV +N +I SY +
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
+ A+ +F EM+ G P T+ VL ACS + G +L M +
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR 414
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 341/585 (58%), Gaps = 48/585 (8%)
Query: 98 FYNVMIRSYVNN---RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
+N++IR+ V+N + + V+ M N PD +T+P +L + +L G + H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
+L LD + FV L++MY CG L A+ V D+ +D+ +WNS+V YA+ D
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITV 274
DA + +F + +++++SW+ +I
Sbjct: 146 DA-------------------------------------RKLFDEMPERNVISWSCLING 168
Query: 275 YMKNSMPGNAIDLYLQME-----KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
Y+ A+DL+ +M+ ++ V P+ T ++VL ACG L AL G+ +H Y+++
Sbjct: 169 YVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKY 228
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKM-KFRDVASWTSLISAYGMTGQGCNALAL 388
+ +++L +LIDMYA+CG LE A++VF+ + +DV +++++I M G L
Sbjct: 229 HVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQL 288
Query: 389 FSEMQNS-GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLL 447
FSEM S I+P+ + FV IL AC H GL+ EGK YFK M +++ ITP I+H+ C+VDL
Sbjct: 289 FSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLY 348
Query: 448 GRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYV 507
GR+G + EA I MP+EP+ +WG+LLS R+ ++ A L++L P SG YV
Sbjct: 349 GRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYV 408
Query: 508 LLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYE 567
LLSN+YAK GRW EV +R M+ + I K PG S VE+ VH F+ GD S +S+ IY
Sbjct: 409 LLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYA 468
Query: 568 ELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITK 626
L ++ +++E GYV +T L D+ E+DKE L+ HSEKLAI F L+ T +P+RI K
Sbjct: 469 MLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIK 528
Query: 627 NLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
NLR+CGDCH+ K+ISK+ REIV+RD NRFHHF+DG CSC D+W
Sbjct: 529 NLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 75/318 (23%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV----NGG 126
++ AYA G ARK+FDE+ ERNV+ ++ +I YV Y +AL +FREM N
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEA 193
Query: 127 F-RPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
F RP+ +T VL AC L G +H + K ++ ++ +G LI MY KCG L A
Sbjct: 194 FVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 186 RYVLDEM-PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
+ V + + ++DV ++++M+ A D+ ++ EM
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEM--------------------- 292
Query: 245 TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCA 304
T+SDN+ P+++T
Sbjct: 293 TTSDNI----------------------------------------------NPNSVTFV 306
Query: 305 SVLPACGDLSALLLGRRIHE-YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
+L AC + G+ + +E + P++ ++D+Y R G +++A+ M
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 364 R-DVASWTSLISAYGMTG 380
DV W SL+S M G
Sbjct: 367 EPDVLIWGSLLSGSRMLG 384
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/654 (35%), Positives = 365/654 (55%), Gaps = 45/654 (6%)
Query: 25 SFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEP--G 82
S Q ++ L+ K LD ++ +K +H ++ ++ + KL+R G P
Sbjct: 42 SNQKELLVSSLISK-LDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDP 100
Query: 83 TARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACS 142
AR+V + + RN + +IR Y +++A+ ++ M P ++T+ +LKAC
Sbjct: 101 YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACG 160
Query: 143 CSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
+L G Q H ++R ++VGN +I MY KC + AR V DEMP RDV+SW
Sbjct: 161 TMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 203 MVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK 262
++A YA+ + A E +F +L
Sbjct: 221 LIAAYARVGNMECAAE-------------------------------------LFESLPT 243
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
K +V+W M+T + +N+ P A++ + +MEKS + D +T A + AC L A R
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 323 HEYVERKKLRP--NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTG 380
+ ++ P ++++ ++LIDMY++CG +E+A VF M ++V +++S+I G
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 381 QGCNALALFSEM-QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH 439
+ AL LF M + I P+ + FV L ACSHSGL+++G+ F M + + P +H
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDH 423
Query: 440 FACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLS 499
+ C+VDLLGR GR+ EA ++IK M +EP+ VWG LL +CR+++N +I +AA++L +L
Sbjct: 424 YTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELE 483
Query: 500 PEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGIS-NVELNSQVHTFLAGDTS 558
P+ G Y+LLSN+YA AG W V VR L+K + ++KTP +S V+ N Q+H F G+ +
Sbjct: 484 PDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLN 543
Query: 559 HPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTH 618
HP S +I ++L LV ++ LGY P+ S +DV + K L H+EKLA+ F+LL T+
Sbjct: 544 HPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTN 603
Query: 619 -ESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+S I I KNLR+C DCH +L S++ G+ I++RD RFHHF+ G CSCGD+W
Sbjct: 604 RDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/650 (34%), Positives = 360/650 (55%), Gaps = 48/650 (7%)
Query: 27 QSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEP--GTA 84
+ P IA+ LD ++ +H KL + ++ L ++A A A
Sbjct: 6 KHPAIAL------LDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYA 59
Query: 85 RKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG--FRPDNYTYPCVLKACS 142
++ D + + N MIR++ + + +R +++ G +PDNYT +++AC+
Sbjct: 60 NQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT 119
Query: 143 CSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
GLQ+HG ++ D + V GLIS+Y + GCL V + +P D V +
Sbjct: 120 GLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTA 179
Query: 203 MVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK 262
MV A+ +V++ + +F + +
Sbjct: 180 MVTACAR-------------------------------------CGDVVFARKLFEGMPE 202
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
+ ++WN MI+ Y + A++++ M+ V+ + + SVL AC L AL GR
Sbjct: 203 RDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWA 262
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
H Y+ER K++ + L +L+D+YA+CG +E A +VF M+ ++V +W+S ++ M G G
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
L LFS M+ G++P+ + FV++L CS G ++EG+ +F M +++ I P++EH+ C
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGC 382
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ 502
LVDL RAGR+++A +I+QMP++P+ VW +LL + R+Y N+++G+LA+ +L+L
Sbjct: 383 LVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETAN 442
Query: 503 SGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQS 562
G YVLLSNIYA + W V+ VR MK + +RK PG S +E+N +VH F GD SHP+
Sbjct: 443 HGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKY 502
Query: 563 KEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES-P 621
+I + +++ GY +T + D++EE+KE L +HSEK AI F +++ E P
Sbjct: 503 TQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVP 562
Query: 622 IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
IRI KNLRVCGDCH + +ISKI REI++RD NRFHHFKDG CSC +W
Sbjct: 563 IRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 422 bits (1086), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/667 (34%), Positives = 354/667 (53%), Gaps = 67/667 (10%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ AY+ G F+++ +R+ V +NV+I Y + A+ + M+ F +
Sbjct: 78 LLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSAN 136
Query: 131 --NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR-- 186
T +LK S + ++ G Q+HG ++K+ + L VG+ L+ MY GC+ +A+
Sbjct: 137 LTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKV 196
Query: 187 -YVLDEMP---------------------------RRDVVSWNSMVAGYAQNMRFDDALE 218
Y LD+ +D VSW +M+ G AQN +A+E
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 219 VCREMDDLGQKPDAGTMASLMPAVTNTSSDN----------------------------- 249
REM G K D S++PA + N
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYC 316
Query: 250 ----VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
+ Y K +F +++K++VSW M+ Y + A+ ++L M++S ++PD T
Sbjct: 317 KCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQ 376
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
+ AC ++S+L G + H L + + NSL+ +Y +CG ++D+ ++F++M RD
Sbjct: 377 AISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRD 436
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFK 425
SWT+++SAY G+ + LF +M G+ PD + ++SACS +GL+E+G+ YFK
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFK 496
Query: 426 QMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM 485
MT +Y I P I H++C++DL R+GR++EA I MP P+ W TLLS+CR N+
Sbjct: 497 LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNL 556
Query: 486 DIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
+IG AA++L++L P Y LLS+IYA G+W V ++R M+ + ++K PG S ++
Sbjct: 557 EIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKW 616
Query: 546 NSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHS 605
++H+F A D S P +IY +L L K+ + GY P+T HDVEE K L HS
Sbjct: 617 KGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHS 676
Query: 606 EKLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGL 664
E+LAI F L+ PIR+ KNLRVC DCH A K IS + GREI++RD RFH FKDG
Sbjct: 677 ERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGT 736
Query: 665 CSCGDYW 671
CSCGD+W
Sbjct: 737 CSCGDFW 743
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 172/391 (43%), Gaps = 65/391 (16%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYN--------- 100
K +H ++I L +G L+ YA G A+KVF + +RN V YN
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218
Query: 101 ---------------------VMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLK 139
MI+ N +A+ FREM G + D Y + VL
Sbjct: 219 GMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 140 ACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVS 199
AC + G Q+H +++ +++VG+ LI MY KC CL A+ V D M +++VVS
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 200 WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDN---------- 249
W +MV GY Q R ++A+++ +M G PD T+ + A N SS
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 250 ---------------VLYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
LY K +F + + VSW M++ Y + I
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK-KLRPNLLLENSLIDMY 345
L+ +M + ++PD +T V+ AC + G+R + + + + P++ + +ID++
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 346 ARCGCLEDAQKVFDKMKF-RDVASWTSLISA 375
+R G LE+A + + M F D WT+L+SA
Sbjct: 519 SRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 18/303 (5%)
Query: 33 VELLGKALDQYP------------DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGE 80
+++ G +DQYP I K +H +I N ++ +G L+ Y C
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 81 PGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKA 140
A+ VFD + ++NVV + M+ Y +A+ +F +M G PD+YT + A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 141 CSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSW 200
C+ +L G Q HG + L + V N L+++YGKCG + ++ + +EM RD VSW
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 201 NSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFI 258
+MV+ YAQ R + +++ +M G KPD T+ ++ A + Y K +
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 259 NLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
S+ ++ MI ++ ++ A+ M PDAI ++L AC + L
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM---PFPPDAIGWTTLLSACRNKGNLE 557
Query: 318 LGR 320
+G+
Sbjct: 558 IGK 560
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 178/475 (37%), Gaps = 116/475 (24%)
Query: 131 NYTYPCVLKAC---SCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARY 187
NY Y +K C + R+ +HG +++ F+ N ++ Y AR
Sbjct: 4 NY-YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARR 62
Query: 188 VLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS 247
V D +P+ ++ SWN+++ Y++ A L+ + +T
Sbjct: 63 VFDRIPQPNLFSWNNLLLAYSK--------------------------AGLISEMEST-- 94
Query: 248 DNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKS-EVEPDAITCASV 306
F L + V+WNV+I Y + + G A+ Y M + +T ++
Sbjct: 95 ---------FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVF-------- 358
L + LG++IH V + LL+ + L+ MYA GC+ DA+KVF
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 359 -----------------DKMKF-----RDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
D ++ +D SW ++I G A+ F EM+ G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 397 ISPDHIAFVAILSACSHSGLLEEGK--------------VYFKQMTDDYRITPRIEHFA- 441
+ D F ++L AC G + EGK +Y D + H+A
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAK 325
Query: 442 ---------------CLVDLLGRAGRVDEAYDVIKQMP---LEPNERVWGTLLSSCRVYS 483
+V G+ GR +EA + M ++P+ G +S+C S
Sbjct: 326 TVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVS 385
Query: 484 NMDIGLLAADNLLQLSPEQSG--YYVLLSN----IYAKAGRWKEVTEVRSLMKRR 532
+++ G + SG +YV +SN +Y K G + T + + M R
Sbjct: 386 SLEEG-----SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR 435
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/655 (34%), Positives = 367/655 (56%), Gaps = 35/655 (5%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
+H+ ++ L N +G L+ AY+ CG +AR VF+ I +++V + ++ YV N +
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
+ D+L + M GF P+NYT+ LKA F +HG +LK + VG G
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
L+ +Y + G + +A V +EMP+ DVV W+ M+A + QN ++A+++ M + P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 232 AGTMASLMPA----------------VTNTSSDNVLYVKD-----------------IFI 258
T++S++ V D +YV + +F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 259 NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL 318
L K+ VSWN +I Y G A ++ + +++V +T +S L AC L+++ L
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 319 GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGM 378
G ++H + + + NSLIDMYA+CG ++ AQ VF++M+ DVASW +LIS Y
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
G G AL + M++ P+ + F+ +LS CS++GL+++G+ F+ M D+ I P +E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQL 498
H+ C+V LLGR+G++D+A +I+ +P EP+ +W +LS+ +N + +A+ +L++
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 499 SPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTS 558
+P+ YVL+SN+YA A +W V +R MK ++K PG+S +E VH F G +
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSD 707
Query: 559 HPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTH 618
HP K I L L K GYVP+ ++ L D+++E+K+ L VHSE+LA+ + L+
Sbjct: 708 HPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMP 767
Query: 619 ESPIR--ITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
S R I KNLR+C DCH A K+IS IV R++VIRD NRFHHF G+CSCGD+W
Sbjct: 768 SSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/480 (24%), Positives = 209/480 (43%), Gaps = 42/480 (8%)
Query: 42 QYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNV 101
Q D I+ K +H ++ S + L+ AY G A +FDE+ ERN V +
Sbjct: 61 QKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVT 120
Query: 102 MIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR 161
+ + Y D + ++ + G + + + LK D LH ++K+
Sbjct: 121 LAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLG 176
Query: 162 LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR 221
D N FVG LI+ Y CG + AR V + + +D+V W +V+ Y +N F+D+L++
Sbjct: 177 YDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLS 236
Query: 222 EMDDLGQKPDAGTMASLMPAVTNTSSDN-----------VLYVKD--------------- 255
M G P+ T + + A + + YV D
Sbjct: 237 CMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLG 296
Query: 256 -------IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLP 308
+F + K +V W+ MI + +N A+DL+++M ++ V P+ T +S+L
Sbjct: 297 DMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
C LG ++H V + ++ + N+LID+YA+C ++ A K+F ++ ++ S
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVS 416
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
W ++I Y G+G A ++F E + +S + F + L AC+ ++ G V +
Sbjct: 417 WNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG-VQVHGLA 475
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG 488
++ L+D+ + G + A V +M + W L+S YS +G
Sbjct: 476 IKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TIDVASWNALISG---YSTHGLG 531
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 167/361 (46%), Gaps = 35/361 (9%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K VH +++ +P +G+ L++ Y G+ A KVF+E+ + +VV ++ MI + N
Sbjct: 267 KGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ N+A+ +F M P+ +T +L C+ G QLHG ++KV D +++V
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGY---------------------- 207
N LI +Y KC + A + E+ ++ VSWN+++ GY
Sbjct: 387 NALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 208 AQNMRFDDALEVCREMD--DLGQKPDA---GTMASLMPAVTNTSSD------NVLYVKDI 256
+ F AL C + DLG + T + AV+N+ D ++ + + +
Sbjct: 447 VTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSAL 316
F +E + SWN +I+ Y + + A+ + M+ + +P+ +T VL C + +
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 317 LLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLIS 374
G+ E + R + P L ++ + R G L+ A K+ + + + V W +++S
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 375 A 375
A
Sbjct: 627 A 627
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/660 (36%), Positives = 362/660 (54%), Gaps = 37/660 (5%)
Query: 44 PDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
PD+ K VH ++ + + L+ Y CG+ +AR +FD + R+++ +N MI
Sbjct: 210 PDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMI 269
Query: 104 RSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD 163
Y N ++ L +F M PD T V+ AC + R G +H ++
Sbjct: 270 SGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFA 329
Query: 164 WNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM 223
++ V N L MY G EA + M R+D+VSW +M++GY N D A++ R M
Sbjct: 330 VDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM 389
Query: 224 DDLGQKPDAGTMASLMPAVTNTS-----------------------SDNV--LYVK---- 254
D KPD T+A+++ A ++N+ +Y K
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 255 ----DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
DIF N+ +K+++SW +I N+ A+ ++L+ K ++P+AIT + L AC
Sbjct: 450 DKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAAC 508
Query: 311 GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWT 370
+ AL+ G+ IH +V R + + L N+L+DMY RCG + A F+ K +DV SW
Sbjct: 509 ARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWN 567
Query: 371 SLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
L++ Y GQG + LF M S + PD I F+++L CS S ++ +G +YF +M +D
Sbjct: 568 ILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-ED 626
Query: 431 YRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLL 490
Y +TP ++H+AC+VDLLGRAG + EA+ I++MP+ P+ VWG LL++CR++ +D+G L
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGEL 686
Query: 491 AADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVH 550
+A ++ +L + GYY+LL N+YA G+W+EV +VR +MK + G S VE+ +VH
Sbjct: 687 SAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746
Query: 551 TFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAI 610
FL+ D HPQ+KEI L KM E+G ++S+ D E ++ HSE+ AI
Sbjct: 747 AFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAI 806
Query: 611 VFALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGD 669
F L+NT PI +TKNL +C +CH K ISK V REI +RD FHHFKDG CSCGD
Sbjct: 807 AFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 168/348 (48%), Gaps = 36/348 (10%)
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
+GN ++M+ + G L++A YV +M R++ SWN +V GYA+ FD+A+ + M +G
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 228 Q-KPDAGTMASLM------PAVTNTSSDNV-------------------LYVKD------ 255
KPD T ++ P + +V +YVK
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 256 --IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+F + ++ ++SWN MI+ Y +N M ++L+ M V+PD +T SV+ AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
LGR IH YV ++ + NSL MY G +A+K+F +M+ +D+ SWT++I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
S Y A+ + M + PD I A+LSAC+ G L+ G V ++ R+
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG-VELHKLAIKARL 429
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRV 481
+ L+++ + +D+A D+ +P N W ++++ R+
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAGLRL 476
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/582 (38%), Positives = 338/582 (58%), Gaps = 43/582 (7%)
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN-----LFVGNGLISMYGKCG 180
G D+ TY ++K C + + G ++ L +N +F+ N LI+MY K
Sbjct: 56 GLWADSATYSELIKCCISNRAVH-----EGNLICRHLYFNGHRPMMFLVNVLINMYVKFN 110
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
L +A + D+MP+R+V+SW +M++ Y++ ALE+ M +P+ T +S++
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 241 AVTNTSSDNVLYV--------KDIFI----------------------NLEKKSLVSWNV 270
+ S +L+ D+F+ + + WN
Sbjct: 171 SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+I + +NS A++L+ +M+++ + T SVL AC L+ L LG + H ++ K
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VK 288
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFS 390
+L+L N+L+DMY +CG LEDA +VF++MK RDV +W+++IS G AL LF
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 391 EMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA 450
M++SG P++I V +L ACSH+GLLE+G YF+ M Y I P EH+ C++DLLG+A
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 451 GRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLS 510
G++D+A ++ +M EP+ W TLL +CRV NM + AA ++ L PE +G Y LLS
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELY 570
NIYA + +W V E+R+ M+ R I+K PG S +E+N Q+H F+ GD SHPQ E+ ++L
Sbjct: 469 NIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLN 528
Query: 571 VLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTH-ESPIRITKNLR 629
L+ ++ +GYVPET+ L D+E E E L HSEKLA+ F L+ E IRI KNLR
Sbjct: 529 QLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLR 588
Query: 630 VCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+CGDCH+ KL SK+ R IVIRD R+HHF+DG CSCGDYW
Sbjct: 589 ICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 174/361 (48%), Gaps = 41/361 (11%)
Query: 51 NVHTKLIYLNSHENPSLGIK-LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
N+ + +Y N H + L+ Y A ++FD++ +RNV+ + MI +Y
Sbjct: 81 NLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKC 140
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ + AL + M+ RP+ YTY VL++C+ ++R LH ++K L+ ++FV
Sbjct: 141 KIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVR 197
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ LI ++ K G +A V DEM D + WNS++ G+AQN R D ALE+ + M G
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFI 257
Query: 230 PDAGTMASLMPAVTNTS---------SDNVLYVKDIFIN--------------------- 259
+ T+ S++ A T + V Y +D+ +N
Sbjct: 258 AEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 260 -LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL 318
++++ +++W+ MI+ +N A+ L+ +M+ S +P+ IT VL AC A LL
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACS--HAGLL 375
Query: 319 GRRIHEYVERKKL---RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLIS 374
+ + KKL P +ID+ + G L+DA K+ ++M+ D +W +L+
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 375 A 375
A
Sbjct: 436 A 436
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 16/247 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ +A GEP A VFDE+ + + +N +I + N + AL +F+ M GF +
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T VL+AC+ L G+Q H + V+ D +L + N L+ MY KCG L +A V +
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SD 248
+M RDV++W++M++G AQN +AL++ M G KP+ T+ ++ A ++ D
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 249 NVLYVKDIFINLEKKSLVS-----WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
Y F +++K + + MI + K +A+ L +M E EPDA+T
Sbjct: 378 GWYY----FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTW 430
Query: 304 ASVLPAC 310
++L AC
Sbjct: 431 RTLLGAC 437
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/610 (37%), Positives = 331/610 (54%), Gaps = 66/610 (10%)
Query: 128 RPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARY 187
+P TY +++ CS + L G ++H + + + N L+ MY KCG L++AR
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 188 VLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG---------------QKPDA 232
V DEMP RD+ SWN MV GYA+ ++A ++ EM + Q +A
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 233 GTMASLMPAVTNT-----------------------------------SSDNVLY----- 252
+ SLM V N+ SD VL+
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 253 ----------VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
++IF + +K +VSW MI Y K+S L+ ++ S P+ T
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
A VL AC DL+ LG+++H Y+ R P +SL+DMY +CG +E A+ V D
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 363 FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKV 422
D+ SWTSLI GQ AL F + SG PDH+ FV +LSAC+H+GL+E+G
Sbjct: 382 KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLE 441
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
+F +T+ +R++ +H+ CLVDLL R+GR ++ VI +MP++P++ +W ++L C Y
Sbjct: 442 FFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 483 SNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN 542
N+D+ AA L ++ PE YV ++NIYA AG+W+E ++R M+ + K PG S
Sbjct: 502 GNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 543 VELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLA 602
E+ + H F+A DTSHP +I E L L KMKE GYVP T LHDVE+E KE +L
Sbjct: 562 TEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLV 621
Query: 603 VHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFK 661
HSEKLA+ FA+L+T E + I++ KNLR C DCH A K IS I R+I +RD+ RFH F+
Sbjct: 622 YHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFE 681
Query: 662 DGLCSCGDYW 671
+G CSCGDYW
Sbjct: 682 NGQCSCGDYW 691
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 160/334 (47%), Gaps = 18/334 (5%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H ++ + L LM Y CG AR +FD+I E++VV + MI Y +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKS 297
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ + +F E+V RP+ YT+ VL AC+ G Q+HG M +V D F
Sbjct: 298 SRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFAS 357
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ L+ MY KCG + A++V+D P+ D+VSW S++ G AQN + D+AL+ + G K
Sbjct: 358 SSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK 417
Query: 230 PDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVS-----WNVMITVYMKNSMPGNA 284
PD T +++ A T+ V + F ++ +K +S + ++ + ++ G
Sbjct: 418 PDHVTFVNVLSACTHAGL--VEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS---GRF 472
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP-NLLLENSLID 343
L + + ++P ASVL C + L + E K+ P N + ++ +
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ--ELFKIEPENPVTYVTMAN 530
Query: 344 MYARCGCLEDAQKVFDKMK-----FRDVASWTSL 372
+YA G E+ K+ +M+ R +SWT +
Sbjct: 531 IYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 204/482 (42%), Gaps = 88/482 (18%)
Query: 32 AVELLGKA----LDQYPDIIAL----------KNVHTKLIYLNSHENPSLGI--KLMRAY 75
AV+LLG+A Y ++I + K VH + S P + I +L+R Y
Sbjct: 73 AVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHI--RTSGFVPGIVIWNRLLRMY 130
Query: 76 AACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN----------G 125
A CG ARKVFDE+ R++ +NVM+ Y +A +F EM
Sbjct: 131 AKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVT 190
Query: 126 GF----------------------RPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD 163
G+ RP+ +T + A + +R G ++HG +++ LD
Sbjct: 191 GYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 164 WNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM 223
+ + + L+ MYGKCGC+ EAR + D++ +DVVSW SM+ Y ++ R+ + + E+
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 224 DDLGQKPDAGTMASLMPAVTNTSSD---------------------------------NV 250
++P+ T A ++ A + +++ N+
Sbjct: 311 VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNI 370
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
K + K LVSW +I +N P A+ + + KS +PD +T +VL AC
Sbjct: 371 ESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Query: 311 GDLSALLLGRR-IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS- 368
+ G + E+ +L L+D+ AR G E + V +M +
Sbjct: 431 THAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL 490
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDH-IAFVAILSACSHSGLLEEGKVYFKQM 427
W S++ G + G LA + + I P++ + +V + + + +G EE K+M
Sbjct: 491 WASVLG--GCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Query: 428 TD 429
+
Sbjct: 549 QE 550
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/633 (36%), Positives = 352/633 (55%), Gaps = 35/633 (5%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+R YA G A VF ++ ++++ +N ++ S+VN+ DAL + M++ G +
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 344
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T+ L AC D G LHG ++ L +N +GN L+SMYGK G + E+R VL
Sbjct: 345 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 404
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV-------- 242
+MPRRDVV+WN+++ GYA++ D AL + M G + T+ S++ A
Sbjct: 405 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 464
Query: 243 -----------TNTSSDN-------VLYVK--------DIFINLEKKSLVSWNVMITVYM 276
SD +Y K D+F L+ +++++WN M+
Sbjct: 465 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 524
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
+ + L +M V D + + L A L+ L G+++H + +
Sbjct: 525 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 584
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ N+ DMY++CG + + K+ R + SW LISA G G A F EM G
Sbjct: 585 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 644
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
I P H+ FV++L+ACSH GL+++G Y+ + D+ + P IEH C++DLLGR+GR+ EA
Sbjct: 645 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 704
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKA 516
I +MP++PN+ VW +LL+SC+++ N+D G AA+NL +L PE YVL SN++A
Sbjct: 705 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 764
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKM 576
GRW++V VR M + I+K S V+L +V +F GD +HPQ+ EIY +L + +
Sbjct: 765 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 824
Query: 577 KELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCH 635
KE GYV +T AL D +EE KE +L HSE+LA+ +AL++T E S +RI KNLR+C DCH
Sbjct: 825 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCH 884
Query: 636 IAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
K +S+++GR IV+RD RFHHF+ GL G
Sbjct: 885 SVYKFVSRVIGRRIVLRDQYRFHHFERGLFGKG 917
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 205/450 (45%), Gaps = 52/450 (11%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ + G A +FD++SER+ + +N + +Y N ++ +F M +
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ T +L D+ ++G +HG ++K+ D + V N L+ MY G +EA V
Sbjct: 244 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--------- 241
+MP +D++SWNS++A + + R DAL + M G+ + T S + A
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 363
Query: 242 -------------VTNTSSDNVLY-----------VKDIFINLEKKSLVSWNVMITVYMK 277
N N L + + + + ++ +V+WN +I Y +
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 423
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC---GDLSALLLGRRIHEYVERKKLRPN 334
+ P A+ + M V + IT SVL AC GDL L G+ +H Y+ +
Sbjct: 424 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESD 481
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
++NSLI MYA+CG L +Q +F+ + R++ +W ++++A G G L L S+M++
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH----FACLVDLLGRA 450
G+S D +F LSA + +LEEG Q + EH F D+ +
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEG-----QQLHGLAVKLGFEHDSFIFNAAADMYSKC 596
Query: 451 GRVDEAYDVIKQMPLEPNERV--WGTLLSS 478
G + E V+K +P N + W L+S+
Sbjct: 597 GEIGE---VVKMLPPSVNRSLPSWNILISA 623
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 181/385 (47%), Gaps = 34/385 (8%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y G +RKVF+E+ +RNVV + ++ Y + + + +++ M G +
Sbjct: 83 ILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCN 142
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ V+ +C + G Q+ G ++K L+ L V N LISM G G + A Y+ D
Sbjct: 143 ENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFD 202
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--------- 241
+M RD +SWNS+ A YAQN +++ + M + ++ T+++L+
Sbjct: 203 QMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 262
Query: 242 -------VTNTSSDNVLYVKD-----------------IFINLEKKSLVSWNVMITVYMK 277
V D+V+ V + +F + K L+SWN ++ ++
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
+ +A+ L M S + +T S L AC GR +H V L N ++
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
N+L+ MY + G + ++++V +M RDV +W +LI Y ALA F M+ G+
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 442
Query: 398 SPDHIAFVAILSACSHSG-LLEEGK 421
S ++I V++LSAC G LLE GK
Sbjct: 443 SSNYITVVSVLSACLLPGDLLERGK 467
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 213/455 (46%), Gaps = 37/455 (8%)
Query: 94 RNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNL-RFGLQ 152
RN V +N M+ V Y + + FR+M + G +P ++ ++ AC S ++ R G+Q
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMR 212
+HG + K L +++V ++ +YG G + +R V +EMP R+VVSW S++ GY+
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 213 FDDALEVCREMDDLGQKPDAGTMASLMP---------------------------AVTNT 245
++ +++ + M G + +M+ ++ AV N+
Sbjct: 124 PEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 246 ------SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
S NV Y IF + ++ +SWN + Y +N + ++ M + E +
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD 359
+ T +++L G + GR IH V + + + N+L+ MYA G +A VF
Sbjct: 244 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 303
Query: 360 KMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE 419
+M +D+ SW SL++++ G+ +AL L M +SG S +++ F + L+AC E+
Sbjct: 304 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 363
Query: 420 GKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
G++ + +I A LV + G+ G + E+ V+ QMP + W L+
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGY 421
Query: 480 RVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYA 514
+ D LAA +++ S Y ++S + A
Sbjct: 422 AEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSA 455
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 178/401 (44%), Gaps = 36/401 (8%)
Query: 7 RNISKLQALVSSF------QKSLASFQSP---------VIAVELLGKALDQYPDIIALKN 51
R++ AL+ + K+LA+FQ+ + V +L L + K
Sbjct: 409 RDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKP 468
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
+H ++ + + L+ YA CG+ +++ +F+ + RN++ +N M+ + ++
Sbjct: 469 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGH 528
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
+ L + +M + G D +++ L A + L G QLHG +K+ + + F+ N
Sbjct: 529 GEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNA 588
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
MY KCG + E +L R + SWN +++ ++ F++ EM ++G KP
Sbjct: 589 AADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 648
Query: 232 AGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYL 289
T SL+ A ++ + Y I + + + + + + S G +
Sbjct: 649 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS--GRLAEAET 706
Query: 290 QMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLI----DMY 345
+ K ++P+ + S+L +C L GR+ E + KL P ++S+ +M+
Sbjct: 707 FISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL--SKLEPE---DDSVYVLSSNMF 761
Query: 346 ARCGCLEDAQKVFDKMKFRDV-----ASWTSL---ISAYGM 378
A G ED + V +M F+++ SW L +S++G+
Sbjct: 762 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGI 802
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/569 (37%), Positives = 341/569 (59%), Gaps = 34/569 (5%)
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD 196
+L+ C+ + + HG ++++ L+ ++ + N LI+ Y KCG + AR V D M R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 197 VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV-------------- 242
+VSWN+M+ Y +N +AL++ EM + G K T++S++ A
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 243 --TNTSSDNVLYV--------------KD---IFINLEKKSLVSWNVMITVYMKNSMPGN 283
T D LYV KD +F +++ KS V+W+ M+ Y++N
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
A+ LY + ++ +E + T +SV+ AC +L+AL+ G+++H + + N+ + +S +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
MYA+CG L ++ +F +++ +++ W ++IS + + + LF +MQ G+ P+ +
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 366
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
F ++LS C H+GL+EEG+ +FK M Y ++P + H++C+VD+LGRAG + EAY++IK +
Sbjct: 367 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 464 PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVT 523
P +P +WG+LL+SCRVY N+++ +AA+ L +L PE +G +VLLSNIYA +W+E+
Sbjct: 427 PFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIA 486
Query: 524 EVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVP 583
+ R L++ ++K G S +++ +VHTF G++ HP+ +EI L LV K ++ GY P
Sbjct: 487 KSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKP 546
Query: 584 ETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKLIS 642
+ LHDVE KE L HSEKLA+VF L+ E SP+RI KNLR+C DCH K S
Sbjct: 547 SVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAAS 606
Query: 643 KIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
R I++RD NRFHHF DG CSCGD+W
Sbjct: 607 MATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 211/410 (51%), Gaps = 41/410 (10%)
Query: 5 LSRNISKL----QALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLN 60
LSRNIS L Q VS + S F + + E+L + + ++ K H K+I ++
Sbjct: 34 LSRNISVLASYDQEEVSPGRYS-NEFSNRNLVHEIL-QLCARNGAVMEAKACHGKIIRID 91
Query: 61 SHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR 120
+ +L L+ AY+ CG AR+VFD + ER++V +N MI Y NR ++AL +F
Sbjct: 92 LEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
EM N GF+ +T VL AC + + +LH +K +D NL+VG L+ +Y KCG
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG 211
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
+ +A V + M + V+W+SMVAGY QN +++AL + R + + + T++S++
Sbjct: 212 MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 241 AVTNTSS-----------------DNV--------LYVK--------DIFINLEKKSLVS 267
A +N ++ NV +Y K IF +++K+L
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 268 WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVE 327
WN +I+ + K++ P + L+ +M++ + P+ +T +S+L CG + GRR + +
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 328 RK-KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WTSLISA 375
L PN++ + ++D+ R G L +A ++ + F AS W SL+++
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/542 (39%), Positives = 322/542 (59%), Gaps = 37/542 (6%)
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM--D 224
F+G+ L+ Y + G + A + DEMP RD+VSWNS+++GY+ EV M
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNV----------------LYVKDIFIN--------- 259
++G +P+ T S++ A S + V + FIN
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 260 --------LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
L K+LVSWN MI ++++N + + + + EPD T +VL +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
D+ + L + IH + N + +L+D+Y++ G LED+ VF ++ D +WT+
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
+++AY G G +A+ F M + GISPDH+ F +L+ACSHSGL+EEGK YF+ M+ Y
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRY 366
Query: 432 RITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLA 491
RI PR++H++C+VDLLGR+G + +AY +IK+MP+EP+ VWG LL +CRVY + +G A
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKA 426
Query: 492 ADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHT 551
A+ L +L P YV+LSNIY+ +G WK+ + +R+LMK++ + + G S +E +++H
Sbjct: 427 AERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHK 486
Query: 552 FLAGDTSHPQSKEIYEELYVLVGKMK-ELGYVPETDSALHDVEEEDKEGHLAVHSEKLAI 610
F+ GD SHP+S++I ++L + KMK E+GY +T+ LHDV E+ KE + HSEK+A+
Sbjct: 487 FVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAM 546
Query: 611 VFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGD 669
F LL PI I KNLR+CGDCH AK IS I R I+IRD+ RFHHF DG CSC D
Sbjct: 547 AFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSD 606
Query: 670 YW 671
YW
Sbjct: 607 YW 608
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 172/396 (43%), Gaps = 43/396 (10%)
Query: 17 SSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYA 76
SSF SL + S +IA A+ I + +H K++ S+ + +G +L+ Y
Sbjct: 24 SSFVHSLDANVSSLIA------AVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYL 77
Query: 77 ACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV--NGGFRPDNYTY 134
G A K+FDE+ ER++V +N +I Y + V M+ GFRP+ T+
Sbjct: 78 RLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTF 137
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
++ AC + G +HG ++K + + V N I+ YGK G L + + +++
Sbjct: 138 LSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI 197
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN---------- 244
+++VSWN+M+ + QN + L +G +PD T +++ + +
Sbjct: 198 KNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGI 257
Query: 245 ---------------TSSDNVLYVK--------DIFINLEKKSLVSWNVMITVYMKNSMP 281
T++ LY K +F + ++W M+ Y +
Sbjct: 258 HGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFG 317
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV-ERKKLRPNLLLENS 340
+AI + M + PD +T +L AC + G+ E + +R ++ P L +
Sbjct: 318 RDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC 377
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVAS-WTSLISA 375
++D+ R G L+DA + +M + W +L+ A
Sbjct: 378 MVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGA 413
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 17/296 (5%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
Y G+ ++ K+F+++S +N+V +N MI ++ N L F G PD T+
Sbjct: 179 YGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
VL++C +R +HG ++ N + L+ +Y K G L ++ V E+
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVK 254
D ++W +M+A YA + DA++ M G PD T L+ A ++ S V K
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSH--SGLVEEGK 356
Query: 255 DIFINLEKK-----SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA 309
F + K+ L ++ M+ + ++ + +A L +M +EP + ++L A
Sbjct: 357 HYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM---PMEPSSGVWGALLGA 413
Query: 310 CGDLSALLLGRRIHEY---VERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
C LG + E +E + R ++L N +Y+ G +DA ++ + MK
Sbjct: 414 CRVYKDTQLGTKAAERLFELEPRDGRNYVMLSN----IYSASGLWKDASRIRNLMK 465
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 231/617 (37%), Positives = 350/617 (56%), Gaps = 40/617 (6%)
Query: 92 SERNVVFYNVM-IRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFG 150
S N V ++ I +N +ALL EM G + Y +L AC LR G
Sbjct: 15 SPTNYVLQTILPISQLCSNGRLQEALL---EMAMLGPEMGFHGYDALLNACLDKRALRDG 71
Query: 151 LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
++H M+K R ++ L+ YGKC CL +AR VLDEMP ++VVSW +M++ Y+Q
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS----------------DNVLYV- 253
+AL V EM KP+ T A+++ + S D+ ++V
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 254 ----------------KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
++IF L ++ +VS +I Y + + A++++ ++ +
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
P+ +T AS+L A L+ L G++ H +V R++L +L+NSLIDMY++CG L A+++
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRL 311
Query: 358 FDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG-ISPDHIAFVAILSACSHSGL 416
FD M R SW +++ Y G G L LF M++ + PD + +A+LS CSH +
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 417 LEEGKVYFKQM-TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTL 475
+ G F M +Y P EH+ C+VD+LGRAGR+DEA++ IK+MP +P V G+L
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSL 431
Query: 476 LSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIR 535
L +CRV+ ++DIG L+++ PE +G YV+LSN+YA AGRW +V VR++M ++ +
Sbjct: 432 LGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVT 491
Query: 536 KTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEE 595
K PG S ++ +H F A D +HP+ +E+ ++ + KMK+ GYVP+ L+DV+EE
Sbjct: 492 KEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEE 551
Query: 596 DKEGHLAVHSEKLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDT 654
KE L HSEKLA+ F L+ T E PIR+ KNLR+C DCH AK+ SK+ RE+ +RD
Sbjct: 552 QKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDK 611
Query: 655 NRFHHFKDGLCSCGDYW 671
NRFH DG+CSCGDYW
Sbjct: 612 NRFHQIVDGICSCGDYW 628
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 168/355 (47%), Gaps = 36/355 (10%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ VH +I L +L+ Y C ARKV DE+ E+NVV + MI Y
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
++AL VF EM+ +P+ +T+ VL +C + L G Q+HG ++K D ++FVG
Sbjct: 132 GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ L+ MY K G + EAR + + +P RDVVS +++AGYAQ ++ALE+ + G
Sbjct: 192 SSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS 251
Query: 230 PDAGTMASLMPAVTN---------------------------------TSSDNVLYVKDI 256
P+ T ASL+ A++ + N+ Y + +
Sbjct: 252 PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRL 311
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLY-LQMEKSEVEPDAITCASVLPACGDLSA 315
F N+ +++ +SWN M+ Y K+ + ++L+ L ++ V+PDA+T +VL C
Sbjct: 312 FDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRM 371
Query: 316 LLLGRRIHE--YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
G I + +P ++DM R G +++A + +M + A
Sbjct: 372 EDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAG 426
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 149/317 (47%), Gaps = 17/317 (5%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H ++ N + +G L+ YA G+ AR++F+ + ER+VV +I Y
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+AL +F + + G P+ TY +L A S L G Q H +L+ L + +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ- 228
N LI MY KCG L AR + D MP R +SWN+M+ GY+++ + LE+ R M D +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 229 KPDAGTMASLMPAVTNTS-SDNVLYVKDIFINLE---KKSLVSWNVMITVYMKNSMPGNA 284
KPDA T+ +++ ++ D L + D + E K + ++ + + A
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACG-DLSALL---LGRRIHEYVERKKLRPNLLLENS 340
+ +M +P A S+L AC LS + +GRR+ E +E + ++L N
Sbjct: 413 FEFIKRMPS---KPTAGVLGSLLGACRVHLSVDIGESVGRRLIE-IEPENAGNYVILSN- 467
Query: 341 LIDMYARCGCLEDAQKV 357
+YA G D V
Sbjct: 468 ---LYASAGRWADVNNV 481
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/627 (35%), Positives = 351/627 (55%), Gaps = 42/627 (6%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H ++ L + L L+ Y CG A +VFDE+ R+ + + ++ +
Sbjct: 23 KALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQA 82
Query: 110 RWYNDALLVFREMVNGG-FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
L VF + + RPD++ + ++KAC+ ++ G Q+H + + V
Sbjct: 83 NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVV 142
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
+ L+ MY KCG L A+ V D + ++ +SW +MV+GYA++ R ++ALE+ R
Sbjct: 143 KSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR------- 195
Query: 229 KPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY 288
++P K+L SW +I+ ++++ A ++
Sbjct: 196 ---------ILPV---------------------KNLYSWTALISGFVQSGKGLEAFSVF 225
Query: 289 LQMEKSEVEP-DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR 347
+M + V+ D + +S++ AC +L+A + GR++H V + + N+LIDMYA+
Sbjct: 226 TEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI 407
C + A+ +F +M+ RDV SWTSLI GQ ALAL+ +M + G+ P+ + FV +
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGL 345
Query: 408 LSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEP 467
+ ACSH G +E+G+ F+ MT DY I P ++H+ CL+DLLGR+G +DEA ++I MP P
Sbjct: 346 IYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPP 405
Query: 468 NERVWGTLLSSCRVYSNMDIGLLAADNLL-QLSPEQSGYYVLLSNIYAKAGRWKEVTEVR 526
+E W LLS+C+ +G+ AD+L+ + Y+LLSNIYA A W +V+E R
Sbjct: 406 DEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEAR 465
Query: 527 SLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMK-ELGYVPET 585
+ +RK PG S+VE+ + F AG+TSHP ++I+ L L +M+ GYVP+T
Sbjct: 466 RKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDT 525
Query: 586 DSALHDVEEEDKEGHLAVHSEKLAIVFALLNT-HESPIRITKNLRVCGDCHIAAKLISKI 644
LHD++E++KE L HSE+ A+ + LL +PIRI KNLRVCGDCH+ K IS+I
Sbjct: 526 SWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEI 585
Query: 645 VGREIVIRDTNRFHHFKDGLCSCGDYW 671
REI++RD R+HHFK G CSC D+W
Sbjct: 586 TEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
L C L + +H ++ + + L N+L+++Y +CG A +VFD+M RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 367 ASWTSLISAYGMTG-QGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK-VYF 424
+W S+++A G S +SG+ PD F A++ AC++ G ++ G+ V+
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 425 KQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSN 484
+ +Y ++ + LVD+ + G ++ A V + ++ N W ++S
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK-NTISWTAMVSGYAKSGR 186
Query: 485 MDIGLLAADNLLQLSPEQSGY-YVLLSNIYAKAGRWKEVTEVRSLMKRRRI 534
+ L L ++ P ++ Y + L + + ++G+ E V + M+R R+
Sbjct: 187 KEEAL----ELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERV 233
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 23/226 (10%)
Query: 7 RNISKLQALVSSFQKS---LASFQ-------------SPVIAVELLGKALDQYPDIIALK 50
+N+ AL+S F +S L +F P++ ++G A IA +
Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG-ACANLAASIAGR 258
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VH +I L + L+ YA C + A+ +F + R+VV + +I +
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK---VRLDWNLF 167
AL ++ +MV+ G +P+ T+ ++ ACS + G +L +M K +R +
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMR 212
L+ + G+ G L EA ++ MP D +W ++++ + R
Sbjct: 379 --TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/646 (36%), Positives = 354/646 (54%), Gaps = 49/646 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
+++AYA + AR++FDEI + + V YN +I Y + R A+++F+ M GF D
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA---RY 187
+T ++ AC D + QLH + D V N ++ Y K G L EA Y
Sbjct: 140 GFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 188 VLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN--- 244
+DE+ RD VSWNSM+ Y Q+ AL + +EM G K D T+AS++ A+T+
Sbjct: 198 GMDEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 245 ---------------------------------TSSDNVLYVKDIFINLEKKSLVSWNVM 271
D + + +F + LV WN M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 272 ITVY-MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
I+ Y M + A+ + QM++ PD + V AC +LS+ ++IH +
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 331 LRPNLL-LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
+ N + + N+LI +Y + G L+DA+ VFD+M + S+ +I Y G G AL L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
M +SGI+P+ I FVA+LSAC+H G ++EG+ YF M + ++I P EH++C++DLLGR
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
AG+++EA I MP +P W LL +CR + NM + AA+ L+ + P + YV+L
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVML 555
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
+N+YA A +W+E+ VR M+ +RIRK PG S +E+ + H F+A D SHP +E+ E L
Sbjct: 556 ANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYL 615
Query: 570 YVLVGKMKELGYVPETDSALHDVEEEDKEG---HLAVHSEKLAIVFALLNTHES-PIRIT 625
++ KMK++GYV + A+ +E + L HSEKLA+ F L++T + + +
Sbjct: 616 EEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVV 675
Query: 626 KNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
KNLR+CGDCH A K +S + GREI++RD RFH FKDG CSCGDYW
Sbjct: 676 KNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 182/404 (45%), Gaps = 40/404 (9%)
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
N+F N ++ Y K + AR + DE+P+ D VS+N++++GYA A+ + + M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 225 DLGQKPDAGTMASLMPAVTNT-------------------SSDNVLYVK----------- 254
LG + D T++ L+ A + SS N +V
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 255 -DIFINL-EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+F + E + VSWN MI Y ++ A+ LY +M + D T ASVL A
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARC-GC--LEDAQKVFDKMKFRDVASW 369
L L+ GR+ H + + N + + LID Y++C GC + D++KVF ++ D+ W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 370 TSLISAYGMTGQ-GCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
++IS Y M + A+ F +MQ G PD +FV + SACS+ + K
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAI 372
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG 488
+ + RI L+ L ++G + +A V +MP E N + ++ + +
Sbjct: 373 KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEA 431
Query: 489 LLAADNLLQ--LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMK 530
LL +L ++P + + +LS A G+ E E + MK
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSAC-AHCGKVDEGQEYFNTMK 474
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 111/211 (52%), Gaps = 5/211 (2%)
Query: 39 ALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPG---TARKVFDEISERN 95
AL +I + H KLI H+N +G L+ Y+ CG + KVF EI +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 96 VVFYNVMIRSY-VNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
+V +N MI Y +N +A+ FR+M G RPD+ ++ CV ACS + Q+H
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 155 GAMLKVRLDWN-LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRF 213
G +K + N + V N LIS+Y K G L +AR+V D MP + VS+N M+ GYAQ+
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 214 DDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
+AL + + M D G P+ T +++ A +
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAH 459
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
S+ L+ Y G AR VFD + E N V +N MI+ Y + +ALL+++ M++
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM---LKVRLDWNLFVGNGLISMYGKCGCL 182
G P+ T+ VL AC+ + G + M K+ + + + +I + G+ G L
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY--SCMIDLLGRAGKL 499
Query: 183 LEARYVLDEMPRR-DVVSWNSMVAG 206
EA +D MP + V+W +++
Sbjct: 500 EEAERFIDAMPYKPGSVAWAALLGA 524
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/663 (33%), Positives = 367/663 (55%), Gaps = 44/663 (6%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H ++ L N S+ L+ Y+ G+ +RKVF+ + +RN+ +N ++ SY
Sbjct: 109 RQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKL 168
Query: 110 RWYNDALLVFREMVNGGFRPDNYTY----------------------------------- 134
+ +DA+ + EM G +PD T+
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
+L+A + +L+ G +HG +L+ +L ++++V LI MY K G L AR V D M
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA 288
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA-VTNTSSDNVLYV 253
+++V+WNS+V+G + DA + M+ G KPDA T SL T + L
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL-- 346
Query: 254 KDIFINLEKK----SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA 309
D+ +++K ++VSW + + KN NA+ ++++M++ V P+A T +++L
Sbjct: 347 -DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
G LS L G+ +H + RK L + + +L+DMY + G L+ A ++F +K + +ASW
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASW 465
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
++ Y M G+G +A FS M +G+ PD I F ++LS C +SGL++EG YF M
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
Y I P IEH +C+VDLLGR+G +DEA+D I+ M L+P+ +WG LSSC+++ ++++
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE 585
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV 549
+A L L P S Y+++ N+Y+ RW++V +R+LM+ R+R S ++++ V
Sbjct: 586 IAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTV 645
Query: 550 HTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLA 609
H F A +HP +IY ELY LV +MK+ GYVP+T D+ + +KE L H+EKLA
Sbjct: 646 HIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLA 705
Query: 610 IVFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
+ + L+ +PIR+ KN +C D H AK +S + REIV+++ R HHF+DG CSC
Sbjct: 706 MTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCN 765
Query: 669 DYW 671
D W
Sbjct: 766 DSW 768
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 196/408 (48%), Gaps = 37/408 (9%)
Query: 72 MRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDN 131
M Y C G A K+FDE+ +R+ + +N ++ + + + A+ +FREM G + +
Sbjct: 30 MGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYD 89
Query: 132 YTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDE 191
T +L+ CS + G Q+HG +L++ L+ N+ + N LI MY + G L +R V +
Sbjct: 90 STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS 149
Query: 192 MPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVL 251
M R++ SWNS+++ Y + DDA+ + EM+ G KPD
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD-------------------- 189
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+V+WN +++ Y + +AI + +M+ + ++P + +S+L A
Sbjct: 190 -------------IVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
+ L LG+ IH Y+ R +L ++ +E +LIDMY + G L A+ VFD M +++ +W S
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
L+S +A AL M+ GI PD I + ++ S + G E+ +M +
Sbjct: 297 LVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK- 355
Query: 432 RITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLL 476
+ P + + + + G A V +M E PN TLL
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/617 (36%), Positives = 340/617 (55%), Gaps = 39/617 (6%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
AR VF+ + ERNVV + M++ Y+ +A +F M P+ +
Sbjct: 98 ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMFGGL 151
Query: 144 SDNLRF--GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWN 201
D+ R +L+ M+ V+ ++ +I + G + EAR + DEM R+VV+W
Sbjct: 152 IDDGRIDKARKLYD-MMPVK---DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWT 207
Query: 202 SMVAGYAQNMRFDDA---LEVCREMDDL------------GQKPDAGTMASLMPA----- 241
+M+ GY QN R D A EV E ++ G+ DA +MP
Sbjct: 208 TMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIA 267
Query: 242 -----VTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
V + + +F +E + +W MI Y + A+DL+ QM+K V
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
P + S+L C L++L GR++H ++ R + ++ + + L+ MY +CG L A+
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
VFD+ +D+ W S+IS Y G G AL +F EM +SG P+ + +AIL+ACS++G
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK 447
Query: 417 LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
LEEG F+ M + +TP +EH++C VD+LGRAG+VD+A ++I+ M ++P+ VWG LL
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
Query: 477 SSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRK 536
+C+ +S +D+ +AA L + P+ +G YVLLS+I A +W +V VR M+ + K
Sbjct: 508 GACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSK 567
Query: 537 TPGISNVELNSQVHTFLAGD-TSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEE 595
PG S +E+ +VH F G +HP+ I L G ++E GY P+ LHDV+EE
Sbjct: 568 FPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEE 627
Query: 596 DKEGHLAVHSEKLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDT 654
+K L+ HSE+LA+ + LL E PIR+ KNLRVCGDCH A KLISK+ REI++RD
Sbjct: 628 EKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDA 687
Query: 655 NRFHHFKDGLCSCGDYW 671
NRFHHF +G CSC DYW
Sbjct: 688 NRFHHFNNGECSCRDYW 704
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 76/370 (20%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVL 138
G+ ARK FD + + + +N ++ Y +N +A +F EM
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS--------------- 75
Query: 139 KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV 198
+ N+ NGL+S Y K ++EAR V + MP R+VV
Sbjct: 76 ------------------------ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMD---------------DLGQKPDAGTMASLMPAVT 243
SW +MV GY Q +A + M D G+ A + +MP
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD 171
Query: 244 NTSSDNVL----------YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK 293
+S N++ + IF + ++++V+W MIT Y +N N +D+ ++ +
Sbjct: 172 VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQN----NRVDVARKLFE 227
Query: 294 SEVEPDAITCASVLPACGDLSALLLGR--RIHEYVERKKLRPNLLLENSLIDMYARCGCL 351
E ++ S+L L L GR E+ E ++P ++ N++I + G +
Sbjct: 228 VMPEKTEVSWTSML-----LGYTLSGRIEDAEEFFEVMPMKP-VIACNAMIVGFGEVGEI 281
Query: 352 EDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC 411
A++VFD M+ RD A+W +I AY G AL LF++MQ G+ P + ++ILS C
Sbjct: 282 SKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVC 341
Query: 412 SHSGLLEEGK 421
+ L+ G+
Sbjct: 342 ATLASLQYGR 351
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 149/329 (45%), Gaps = 27/329 (8%)
Query: 173 ISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDA 232
IS + G + EAR D + + + SWNS+V+GY N +A ++ EM +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 233 GTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQME 292
G ++ + + ++ +++F + ++++VSW M+ YM+ M G A L+ +M
Sbjct: 84 GLVSGYI------KNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 293 KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLE 352
E + ++ + D + R++++ + K +++ ++I R G ++
Sbjct: 138 ----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVD 189
Query: 353 DAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACS 412
+A+ +FD+M+ R+V +WT++I+ Y + A LF M +++ ++L +
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYT 245
Query: 413 HSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVW 472
SG +E+ + +F+ M + P I A +V G G + +A V M N
Sbjct: 246 LSGRIEDAEEFFEVMP----MKPVIACNAMIVG-FGEVGEISKARRVFDLMEDRDN---- 296
Query: 473 GTLLSSCRVYSNMDIGLLAADNLLQLSPE 501
T + Y L A D Q+ +
Sbjct: 297 ATWRGMIKAYERKGFELEALDLFAQMQKQ 325
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ VH L+ ++ + LM Y CGE A+ VFD S ++++ +N +I Y ++
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM-LKVRLDWNLFV 168
+AL +F EM + G P+ T +L ACS + L GL++ +M K + +
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEH 470
Query: 169 GNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
+ + M G+ G + +A +++ M + D W +++ + R D A +++
Sbjct: 471 YSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKL--FE 528
Query: 228 QKPDAGTMASLMPAVTNTSS 247
+PD L+ ++ + S
Sbjct: 529 NEPDNAGTYVLLSSINASRS 548
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/542 (40%), Positives = 316/542 (58%), Gaps = 35/542 (6%)
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
N N LI+ Y + G L+ AR V DEMP R + +WN+M+AG Q ++ L + REM
Sbjct: 24 NYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMH 83
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNV-------------------------LYVKD---- 255
LG PD T+ S+ S ++ +Y+++
Sbjct: 84 GLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ 143
Query: 256 ----IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+ ++ ++LV+WN +I +N P + LY M+ S P+ IT +VL +C
Sbjct: 144 DGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 203
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
DL+ G++IH + + + +SLI MY++CGCL DA K F + + D W+S
Sbjct: 204 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 372 LISAYGMTGQGCNALALFSEM-QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
+ISAYG GQG A+ LF+ M + + + + +AF+ +L ACSHSGL ++G F M +
Sbjct: 264 MISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK 323
Query: 431 YRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLL 490
Y P ++H+ C+VDLLGRAG +D+A +I+ MP++ + +W TLLS+C ++ N ++
Sbjct: 324 YGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQR 383
Query: 491 AADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVH 550
+LQ+ P S YVLL+N++A A RW++V+EVR M+ + ++K GIS E +VH
Sbjct: 384 VFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 443
Query: 551 TFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAI 610
F GD S +SKEIY L L +MK GY P+T S LHD++EE+KE L HSEKLA+
Sbjct: 444 QFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAV 503
Query: 611 VFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGD 669
FAL+ E +PIRI KNLRVC DCH+A K IS I REI +RD +RFHHF +G CSCGD
Sbjct: 504 AFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGD 563
Query: 670 YW 671
YW
Sbjct: 564 YW 565
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 182/406 (44%), Gaps = 45/406 (11%)
Query: 40 LDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFY 99
L +P +A+ K Y++S+ L+ Y G+ ARKVFDE+ +R + +
Sbjct: 7 LGDFPSAVAVYGRMRKKNYMSSN-------ILINGYVRAGDLVNARKVFDEMPDRKLTTW 59
Query: 100 NVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
N MI + + + L +FREM GF PD YT V + ++ G Q+HG +K
Sbjct: 60 NAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK 119
Query: 160 VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEV 219
L+ +L V + L MY + G L + V+ MP R++V+WN+++ G AQN + L +
Sbjct: 120 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYL 179
Query: 220 CREMDDLGQKPDAGTMASLMPAVTNTSSDN-------------------------VLYVK 254
+ M G +P+ T +++ + ++ + +Y K
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 255 --------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCAS 305
F E + V W+ MI+ Y + AI+L+ M E++ +E + + +
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 306 VLPACGDLSALLLGRRIHE-YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
+L AC G + + VE+ +P L ++D+ R GCL+ A+ + M +
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 365 -DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILS 409
D+ W +L+SA + A +F E+ I P+ A +L+
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYVLLA 403
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/639 (35%), Positives = 361/639 (56%), Gaps = 37/639 (5%)
Query: 68 GIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGF 127
G KL+ A CG+ AR+VFD +SER++V +N +I + +R +A+ ++R M+
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161
Query: 128 RPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW-NLFVGNGLISMYGKCGCLLEAR 186
PD YT V KA S + + HG + + L+ N+FVG+ L+ MY K G EA+
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAK 221
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM------- 239
VLD + +DVV +++ GY+Q +A++ + M +P+ T AS++
Sbjct: 222 LVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLK 281
Query: 240 ------------------PAVTNTSSDNVLYVK--------DIFINLEKKSLVSWNVMIT 273
A+ + +S +Y++ +F +E + VSW +I+
Sbjct: 282 DIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS 341
Query: 274 VYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP 333
++N A+ + +M + ++P++ T +S L C +L+ GR+IH V +
Sbjct: 342 GLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDR 401
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ 393
+ + LID+Y +CGC + A+ VFD + DV S ++I +Y G G AL LF M
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 394 NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
N G+ P+ + +++L AC++S L+EEG F D +I +H+AC+VDLLGRAGR+
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRL 520
Query: 454 DEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIY 513
+EA +++ + P+ +W TLLS+C+V+ +++ +L++ P G +L+SN+Y
Sbjct: 521 EEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 514 AKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDT-SHPQSKEIYEELYVL 572
A G+W V E++S MK +++K P +S VE+N + HTF+AGD SHP S++I E L L
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Query: 573 VGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHESPIRITKNLRVCG 632
+ K K+LGYV + D+EE KE L HSEKLAI FA+ IRI KNLRVC
Sbjct: 640 IKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGGSIRILKNLRVCV 699
Query: 633 DCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
DCH K++S+++ REI+ RD+ RFHHF+DG CSCGDYW
Sbjct: 700 DCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 41/349 (11%)
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
N +G L+ Y G+ A+ V D + E++VV +I Y +A+ F+ M+
Sbjct: 200 NVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
+P+ YTY VL +C ++ G +HG M+K + L L++MY +C +
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 319
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA-- 241
++ V + + VSW S+++G QN R + AL R+M KP++ T++S +
Sbjct: 320 DSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCS 379
Query: 242 --------------VTNTSSDNVLY-----------------VKDIFINLEKKSLVSWNV 270
VT D Y + +F L + ++S N
Sbjct: 380 NLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNT 439
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
MI Y +N A+DL+ +M ++P+ +T SVL AC + + G + + + K
Sbjct: 440 MIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDK 499
Query: 331 LRPNLLLENS----LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
++L N ++D+ R G LE+A+ + ++ D+ W +L+SA
Sbjct: 500 ----IMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/613 (35%), Positives = 346/613 (56%), Gaps = 73/613 (11%)
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVV---FYNVMIRSYVNNRWYNDALLVFR 120
NP L KL+ ++ C ARK+FD++++ +++ + M Y N DAL+V+
Sbjct: 166 NPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYV 225
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
+M+ P N++ LKA C D LK +L VG G+ +
Sbjct: 226 DMLCSFIEPGNFSISVALKA--CVD------------LK-----DLRVGRGIHAQ----- 261
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
++ + D V +N ++ Y ++ FDDA
Sbjct: 262 -------IVKRKEKVDQVVYNVLLKLYMESGLFDDA------------------------ 290
Query: 241 AVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
+ +F + ++++V+WN +I+V K +L+ +M++ +
Sbjct: 291 -------------RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW 337
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
T ++LPAC ++ALL G+ IH + + K +P++ L NSL+DMY +CG +E +++VFD
Sbjct: 338 ATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDV 397
Query: 361 MKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
M +D+ASW +++ Y + G + LF M SG++PD I FVA+LS CS +GL E G
Sbjct: 398 MLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYG 457
Query: 421 KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCR 480
F++M ++R++P +EH+ACLVD+LGRAG++ EA VI+ MP +P+ +WG+LL+SCR
Sbjct: 458 LSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCR 517
Query: 481 VYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGI 540
++ N+ +G +AA L L P G YV++SNIYA A W V ++R +MK+R ++K G
Sbjct: 518 LHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGC 577
Query: 541 SNVELNSQVHTFLAGDTSHPQSKEIYEELYV-LVGKMKELGYVPETDSALHDVEEEDKEG 599
S V++ ++ F+AG ++ + Y++++ L +++ GY P T LHDV+EE K
Sbjct: 578 SWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKAN 637
Query: 600 HLAVHSEKLAIVFALLNTHES-PIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFH 658
+ HSE+LA ++L++T E PIRITKNLRVC DCH K++S++ R IV+RDT RFH
Sbjct: 638 WVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFH 697
Query: 659 HFKDGLCSCGDYW 671
HF DG+CSC DYW
Sbjct: 698 HFVDGICSCKDYW 710
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 8/194 (4%)
Query: 15 LVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGI--KLM 72
L Q+ + F + L A + ++ K +H ++ L S E P + + LM
Sbjct: 324 LFRKMQEEMIGFSWATLTTIL--PACSRVAALLTGKEIHAQI--LKSKEKPDVPLLNSLM 379
Query: 73 RAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNY 132
Y CGE +R+VFD + +++ +N+M+ Y N + + +F M+ G PD
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAM-LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDE 191
T+ +L CS + +GL L M + R+ L L+ + G+ G + EA V++
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 192 MPRRDVVS-WNSMV 204
MP + S W S++
Sbjct: 500 MPFKPSASIWGSLL 513
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/648 (33%), Positives = 348/648 (53%), Gaps = 48/648 (7%)
Query: 63 ENPSLGIK--LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR 120
ENPS+ ++ +++ Y C A K+FDE+SE N V MI +Y + A+ +F
Sbjct: 114 ENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
M+ G +P + Y +LK+ L FG Q+H +++ L N + G+++MY KCG
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
L+ A+ V D+M + V+ ++ GY Q R DAL++ ++ G + D+ + ++
Sbjct: 234 WLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLK 293
Query: 241 AVTNTSSDNV-------------------------LYVK--------DIFINLEKKSLVS 267
A + N+ Y+K F + + + VS
Sbjct: 294 ACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS 353
Query: 268 WNVMITVYMKNSMPGNAIDLYLQME-KSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
W+ +I+ Y + S A+ + + K+ ++ T S+ AC L+ +G ++H
Sbjct: 354 WSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADA 413
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNAL 386
++ L + E++LI MY++CGCL+DA +VF+ M D+ +WT+ IS + G AL
Sbjct: 414 IKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEAL 473
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDL 446
LF +M + G+ P+ + F+A+L+ACSH+GL+E+GK M Y + P I+H+ C++D+
Sbjct: 474 RLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDI 533
Query: 447 LGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYY 506
R+G +DEA +K MP EP+ W LS C + N+++G +A + L QL PE + Y
Sbjct: 534 YARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGY 593
Query: 507 VLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIY 566
VL N+Y AG+W+E E+ LM R ++K S ++ ++H F+ GD HPQ++EIY
Sbjct: 594 VLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIY 653
Query: 567 EELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTH---ESPIR 623
E K+KE E D + ++ L HSE+LAI F L++ H +PI+
Sbjct: 654 E-------KLKEFDGFMEGD--MFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIK 704
Query: 624 ITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+ KNLR C DCH AK +S + G EIVIRD+ RFHHFK+G CSC DYW
Sbjct: 705 VFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 162/362 (44%), Gaps = 36/362 (9%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H +I N S+ ++ Y CG A++VFD+++ + V ++ Y
Sbjct: 204 RQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQA 263
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
DAL +F ++V G D++ + VLKAC+ + L G Q+H + K+ L+ + VG
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDA------------- 216
L+ Y KC A E+ + VSW+++++GY Q +F++A
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 217 ----------LEVCREMDDL---GQKPDAGTMASLMPAVTNTSSDNVLYVK--------D 255
+ C + D GQ SL+ + S+ +Y K +
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+F +++ +V+W I+ + A+ L+ +M ++P+++T +VL AC
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 316 LLLGRRIHEYVERK-KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLI 373
+ G+ + + RK + P + + +ID+YAR G L++A K M F D SW +
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFL 563
Query: 374 SA 375
S
Sbjct: 564 SG 565
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 187/431 (43%), Gaps = 40/431 (9%)
Query: 90 EISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRF 149
+IS + N+ + S +R N+A +EM G +Y+Y C+ +AC +L
Sbjct: 42 KISHKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH 101
Query: 150 GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
G LH M + ++ + N ++ MY +C L +A + DEM + VS +M++ YA+
Sbjct: 102 GRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAE 161
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV------------------- 250
D A+ + M G KP + +L+ ++ N + +
Sbjct: 162 QGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSI 221
Query: 251 ------LYV--------KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
+YV K +F + K V+ ++ Y + +A+ L++ + V
Sbjct: 222 ETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGV 281
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
E D+ + VL AC L L LG++IH V + L + + L+D Y +C E A +
Sbjct: 282 EWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR 341
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISP-DHIAFVAILSACSHSG 415
F +++ + SW+++IS Y Q A+ F +++ S + + +I ACS
Sbjct: 342 AFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS--- 398
Query: 416 LLEEGKVYFKQMTDDYRITPRIEHF--ACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWG 473
+L + + + D + + + + L+ + + G +D+A +V + M P+ W
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWT 457
Query: 474 TLLSSCRVYSN 484
+S Y N
Sbjct: 458 AFISGHAYYGN 468
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/662 (34%), Positives = 368/662 (55%), Gaps = 47/662 (7%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H +I L + + L+ Y G A KVF+E+ ER++V +N MI Y+
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD-WNLFV 168
+L++F+EM+ GF+PD ++ L ACS + + G ++H ++ R++ ++ V
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL-G 227
++ MY K G + A + + M +R++V+WN M+ YA+N R DA ++M + G
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 228 QKPDAGTMASLMPAVTNTSSDNV---------------------LY--------VKDIFI 258
+PD T +L+PA + +Y + IF
Sbjct: 330 LQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFD 389
Query: 259 NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL 318
+ +K+++SWN +I Y++N +A++L+ ++ S + PD+ T AS+LPA + +L
Sbjct: 390 RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSE 449
Query: 319 GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGM 378
GR IH Y+ + + N ++ NSL+ MYA CG LEDA+K F+ + +DV SW S+I AY +
Sbjct: 450 GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
G G ++ LFSEM S ++P+ F ++L+ACS SG+++EG YF+ M +Y I P IE
Sbjct: 510 HGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 569
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQL 498
H+ C++DL+GR G A +++MP P R+WG+LL++ R + ++ I AA+ + ++
Sbjct: 570 HYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKM 629
Query: 499 SPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTS 558
+ +G YVLL N+YA+AGRW++V ++ LM+ + I +T S VE + H F GD S
Sbjct: 630 EHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRS 689
Query: 559 HPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEE-------EDKEGHLAVHSEKLAIV 611
H + +IYE L V V +M V E D +H V + + HS +LA
Sbjct: 690 HVATNKIYEVLDV-VSRM-----VGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATC 743
Query: 612 FALLNTHESPIRIT--KNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGD 669
F L++T E+ R+T N R+C CH + S++ REIV+ D+ FHHF +G CSCG+
Sbjct: 744 FGLIST-ETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGN 802
Query: 670 YW 671
YW
Sbjct: 803 YW 804
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 214/393 (54%), Gaps = 40/393 (10%)
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
+P+L + +R +A A ++FDE+++ + +NVMI+ + + Y +A+ + MV
Sbjct: 64 DPAL-TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
G + D +TYP V+K+ + +L G ++H ++K+ +++V N LIS+Y K GC
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
+A V +EMP RD+VSWNSM++GY +L + +EM G KPD + S + A +
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 244 NTSS----------------------------------DNVLYVKDIFINLEKKSLVSWN 269
+ S V Y + IF + ++++V+WN
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 270 VMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
VMI Y +N +A + +M E++ ++PD IT ++LPA SA+L GR IH Y R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMR 358
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
+ P+++LE +LIDMY CG L+ A+ +FD+M ++V SW S+I+AY G+ +AL L
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
F E+ +S + PD +IL A + S L EG+
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 17/229 (7%)
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+F + K WNVMI + + A+ Y +M + V+ D T V+ + +S+
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L G++IH V + ++ + NSLI +Y + GC DA+KVF++M RD+ SW S+IS
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD---YR 432
Y G G ++L LF EM G PD + ++ L ACSH VY +M + +
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH--------VYSPKMGKEIHCHA 257
Query: 433 ITPRIEH-----FACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
+ RIE ++D+ + G V A + M ++ N W ++
Sbjct: 258 VRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMI 305
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 189/413 (45%), Gaps = 53/413 (12%)
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
+A + DEM + D WN M+ G+ + +A++ M G K D T ++ +V
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 244 NTSS-----------DNVLYVKDIFI----------------------NLEKKSLVSWNV 270
SS + +V D+++ + ++ +VSWN
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNS 201
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
MI+ Y+ +++ L+ +M K +PD + S L AC + + +G+ IH + R +
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 331 LRP-NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
+ ++++ S++DMY++ G + A+++F+ M R++ +W +I Y G+ +A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 390 SEM-QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
+M + +G+ PD I + +L A S +LE ++ M + P + L+D+ G
Sbjct: 322 QKMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMRRGF--LPHMVLETALIDMYG 376
Query: 449 RAGRVDEAYDVIKQMPLEPNERVWGTLLSS----CRVYSNMDIGLLAADNLLQLSPEQSG 504
G++ A + +M E N W +++++ + YS +++ D+ L P+ +
Sbjct: 377 ECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQNGKNYSALELFQELWDS--SLVPDSTT 433
Query: 505 YYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF-LAGD 556
+L YA++ E E+ + + + R I LNS VH + + GD
Sbjct: 434 IASILP-AYAESLSLSEGREIHAYIVKSRYWSNTII----LNSLVHMYAMCGD 481
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 7 RNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIAL---KNVHTKLIYLNSHE 63
+N S L+ + SL + + ++ L Y + ++L + +H ++
Sbjct: 411 KNYSALELFQELWDSSLVPDSTTIASI------LPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
N + L+ YA CG+ ARK F+ I ++VV +N +I +Y + + ++ +F EM+
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNLFVGNGLISMYGKCGCL 182
P+ T+ +L ACS S + G + +M + +D + ++ + G+ G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 183 LEARYVLDEMP 193
A+ L+EMP
Sbjct: 585 SAAKRFLEEMP 595
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 241/661 (36%), Positives = 354/661 (53%), Gaps = 61/661 (9%)
Query: 63 ENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREM 122
+N L L+ YA CG AR+VFD + ERNVV + +I YV + +F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 123 VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKC--- 179
++ F P+ +T VL +C G Q+HG LK+ L +++V N +ISMYG+C
Sbjct: 154 LSHCF-PNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 180 GCLLEARYVLDEMPRRDVVSWNSMVAGY-----------------AQNMRFDDAL----- 217
EA V + + +++V+WNSM+A + + + FD A
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNIC 268
Query: 218 ---------------EVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKD---IFIN 259
+ C ++ L K T + A+ S+ + D +F+
Sbjct: 269 SSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFME 328
Query: 260 LEK-KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL 318
+ + +V+WN +IT + P AI L+ Q+ + ++ PD T +SVL AC L
Sbjct: 329 MSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARH 387
Query: 319 GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGM 378
IH V + + +L NSLI YA+CG L+ +VFD M RDV SW S++ AY +
Sbjct: 388 ALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSL 447
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
GQ + L +F +M I+PD F+A+LSACSH+G +EEG F+ M + P++
Sbjct: 448 HGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN 504
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQL 498
H+AC++D+L RA R EA +VIKQMP++P+ VW LL SCR + N +G LAAD L +L
Sbjct: 505 HYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKEL 564
Query: 499 -SPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDT 557
P S Y+ +SNIY G + E M+ R+RK P +S E+ ++VH F +G
Sbjct: 565 VEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGR 624
Query: 558 SHPQSKEIYEELYVLVGKMKELGYVPETDSA-LHDVEEEDKEGHLAVHSEKLAIVFALLN 616
P + +Y EL L+ +KE+GYVPE SA +EE +E +L HSEKLA+ FA++
Sbjct: 625 HRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVME 684
Query: 617 THESP------IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDY 670
+S I+I KN R+C DCH KL SK++G+EI++RD+NRFHHFKD CSC DY
Sbjct: 685 GRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDY 744
Query: 671 W 671
W
Sbjct: 745 W 745
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 202/478 (42%), Gaps = 98/478 (20%)
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW--NLFVGNGLISMYGKCGCLLEARYVLD 190
Y + +AC+ NL G+ LH ML + N+ + N LI+MY KCG +L AR V D
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 191 EMPRRDVVSWNSMVAGYAQNMR-------FDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
MP R+VVSW +++ GY Q F L C P+ T++S++ +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF--------PNEFTLSSVLTSCR 172
Query: 244 NTSSDNV------------LYVKD--------------------IFINLEKKSLVSWNVM 271
V +YV + +F ++ K+LV+WN M
Sbjct: 173 YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSM 232
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGR------RIHEY 325
I + ++ AI ++++M V D T ++ + S L+ ++H
Sbjct: 233 IAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSL 292
Query: 326 VERKKLRPNLLLENSLIDMYARCGCLE---DAQKVFDKMKF-RDVASWTSLISAYGMTGQ 381
+ L + +LI +Y+ LE D K+F +M RD+ +W +I+A+ +
Sbjct: 293 TVKSGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP 350
Query: 382 GCNALALFSEMQNSGISPDHIAFVAILSACS-----------HSGLLEEG---------- 420
A+ LF +++ +SPD F ++L AC+ H+ +++ G
Sbjct: 351 E-RAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 421 --KVYFK--------QMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER 470
Y K ++ DD + + + ++ G+VD V ++M + P+
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMD-SRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSA 468
Query: 471 VWGTLLSSCRVYSNMDIGLLAADNLLQLSPE---QSGYYVLLSNIYAKAGRWKEVTEV 525
+ LLS+C ++ GL ++ + PE Q +Y + ++ ++A R+ E EV
Sbjct: 469 TFIALLSACSHAGRVEEGLRIFRSMFE-KPETLPQLNHYACVIDMLSRAERFAEAEEV 525
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
++H ++I + L L+ AYA CG +VFD++ R+VV +N M+++Y +
Sbjct: 390 SIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML-KVRLDWNLFVG 169
+ L VF++M PD+ T+ +L ACS + + GL++ +M K L
Sbjct: 450 QVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY 506
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRR-DVVSWNSMVA 205
+I M + EA V+ +MP D V W +++
Sbjct: 507 ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLG 543
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/632 (34%), Positives = 348/632 (55%), Gaps = 12/632 (1%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
D +L++VH +++ + + +L+ + P + +F ERN N +IR
Sbjct: 41 DTASLRHVHAQILR-RGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIR 99
Query: 105 SYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
N + ++ F M+ G +PD T+P VLK+ S G LH A LK +D
Sbjct: 100 GLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDC 159
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVC 220
+ FV L+ MY K G L A V +E P R ++ WN ++ GY + A +
Sbjct: 160 DSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLF 219
Query: 221 REMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSM 280
R M + ++G+ ++L+ ++ N K +F + +K++VSW +I + +
Sbjct: 220 RSMPE----RNSGSWSTLIKGYVDSGELN--RAKQLFELMPEKNVVSWTTLINGFSQTGD 273
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
AI Y +M + ++P+ T A+VL AC AL G RIH Y+ ++ + + +
Sbjct: 274 YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTA 333
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
L+DMYA+CG L+ A VF M +D+ SWT++I + + G+ A+ F +M SG PD
Sbjct: 334 LVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPD 393
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI 460
+ F+A+L+AC +S ++ G +F M DY I P ++H+ +VDLLGRAG+++EA++++
Sbjct: 394 EVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELV 453
Query: 461 KQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWK 520
+ MP+ P+ W L +C+ + + NLL+L PE G Y+ L +A G +
Sbjct: 454 ENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQ 513
Query: 521 EVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELG 580
+V + R +++R ++ G S +EL+ Q++ F AGD SH ++EI +L ++ + G
Sbjct: 514 DVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKG 573
Query: 581 YVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAK 639
Y P D ++HD+EEE+KE +HSEKLA+ L T + IRI KNLR+CGDCH K
Sbjct: 574 YNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMK 633
Query: 640 LISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+SKI R+I++RD +FHHFKDG CSCGDYW
Sbjct: 634 YVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 185/422 (43%), Positives = 280/422 (66%), Gaps = 4/422 (0%)
Query: 254 KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+ +F + +KS+V+WN +++ + +N + AI ++ QM +S EPD+ T S+L AC
Sbjct: 162 RQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQT 221
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
A+ LG +H+Y+ + L N+ L +LI++Y+RCG + A++VFDKMK +VA+WT++I
Sbjct: 222 GAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMI 281
Query: 374 SAYGMTGQGCNALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
SAYG G G A+ LF++M++ G P+++ FVA+LSAC+H+GL+EEG+ +K+MT YR
Sbjct: 282 SAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYR 341
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER---VWGTLLSSCRVYSNMDIGL 489
+ P +EH C+VD+LGRAG +DEAY I Q+ +W +L +C+++ N D+G+
Sbjct: 342 LIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGV 401
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV 549
A L+ L P+ G++V+LSNIYA +G+ EV+ +R M R +RK G S +E+ ++
Sbjct: 402 EIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKT 461
Query: 550 HTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLA 609
+ F GD SH ++ EIY L L+ + KE+GY P ++ +H VEEE+KE L HSEKLA
Sbjct: 462 YMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLA 521
Query: 610 IVFALLNTHESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGD 669
+ F LL T + I I KNLR+C DCH A K IS + R+I +RD RFHHF++G CSC D
Sbjct: 522 VAFGLLKTVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLD 581
Query: 670 YW 671
YW
Sbjct: 582 YW 583
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 170/374 (45%), Gaps = 39/374 (10%)
Query: 44 PDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
P + L+ VH LI + SL KL+ + +F + + +N +I
Sbjct: 20 PRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVI 79
Query: 104 RSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD 163
+S R + +R M++ P NYT+ V+K+C+ LR G +H +
Sbjct: 80 KSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFG 139
Query: 164 WNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM 223
+ +V L++ Y KCG + AR V D MP + +V+WNS+V+G+ QN D+A++V +M
Sbjct: 140 LDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM 199
Query: 224 DDLGQKPDAGTMASLMPAVTNTSS---------------------------------DNV 250
+ G +PD+ T SL+ A T + +V
Sbjct: 200 RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKS-EVEPDAITCASVLPA 309
+++F +++ ++ +W MI+ Y + A++L+ +ME P+ +T +VL A
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 310 CGDLSALLLGRRIHEYVERK-KLRPNLLLENSLIDMYARCGCLEDAQKVFDKM----KFR 364
C + GR +++ + + +L P + ++DM R G L++A K ++ K
Sbjct: 320 CAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKAT 379
Query: 365 DVASWTSLISAYGM 378
A WT+++ A M
Sbjct: 380 APALWTAMLGACKM 393
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 17/305 (5%)
Query: 246 SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
S+ + Y +F+++ +N +I K +P + + Y +M S V P T S
Sbjct: 53 SARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTS 112
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
V+ +C DLSAL +G+ +H + + ++ +L+ Y++CG +E A++VFD+M +
Sbjct: 113 VIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKS 172
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFK 425
+ +W SL+S + G A+ +F +M+ SG PD FV++LSAC+ +G + G +
Sbjct: 173 IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS-WVH 231
Query: 426 QMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM 485
Q + ++ L++L R G V +A +V +M E N W ++S+ Y
Sbjct: 232 QYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISA---YGTH 287
Query: 486 DIGLLAADNLLQLS------PEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR--RRIRKT 537
G A + ++ P + +LS A AG V E RS+ KR + R
Sbjct: 288 GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC-AHAGL---VEEGRSVYKRMTKSYRLI 343
Query: 538 PGISN 542
PG+ +
Sbjct: 344 PGVEH 348
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 122/230 (53%), Gaps = 6/230 (2%)
Query: 16 VSSFQKSLASFQSPVIAVELLGKALDQYPDIIAL---KNVHTKLIYLNSHENPSLGIKLM 72
V+ +++ L+S SP + + D+ AL K VH + + + L+
Sbjct: 92 VAYYRRMLSSNVSP--SNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALV 149
Query: 73 RAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNY 132
Y+ CG+ AR+VFD + E+++V +N ++ + N ++A+ VF +M GF PD+
Sbjct: 150 TFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSA 209
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
T+ +L AC+ + + G +H ++ LD N+ +G LI++Y +CG + +AR V D+M
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMPA 241
+V +W +M++ Y + A+E+ +M DD G P+ T +++ A
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 326/559 (58%), Gaps = 34/559 (6%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
S+ L+ Y+ CG A K+F +S + V +N MI YV + ++L F EM++
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G PD T+ +L + S +NL + Q+H +++ + ++F+ + LI Y KC + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV--- 242
+ + + DVV + +M++GY N + D+LE+ R + + P+ T+ S++P +
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 243 -------------TNTSSDNV---------LYVK--------DIFINLEKKSLVSWNVMI 272
DN +Y K +IF L K+ +VSWN MI
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
T ++ P AID++ QM S + D ++ ++ L AC +L + G+ IH ++ + L
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLA 574
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM 392
++ E++LIDMYA+CG L+ A VF MK +++ SW S+I+A G G+ ++L LF EM
Sbjct: 575 SDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634
Query: 393 -QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
+ SGI PD I F+ I+S+C H G ++EG +F+ MT+DY I P+ EH+AC+VDL GRAG
Sbjct: 635 VEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAG 694
Query: 452 RVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSN 511
R+ EAY+ +K MP P+ VWGTLL +CR++ N+++ +A+ L+ L P SGYYVL+SN
Sbjct: 695 RLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISN 754
Query: 512 IYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYV 571
+A A W+ VT+VRSLMK R ++K PG S +E+N + H F++GD +HP+S IY L
Sbjct: 755 AHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNS 814
Query: 572 LVGKMKELGYVPETDSALH 590
L+G+++ GY+P+ LH
Sbjct: 815 LLGELRLEGYIPQPYLPLH 833
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 219/471 (46%), Gaps = 49/471 (10%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER--NVVFYNVMIRSYV 107
K VH LI + + +++ YA CG K+F + R ++ +N +I S+V
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFV 114
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
N N AL + +M+ G PD T+PC++KAC N + L + + +D N F
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEF 174
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ------------------ 209
V + LI Y + G + + D + ++D V WN M+ GYA+
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 210 ----NMRFDDALEVC--REMDDLGQKPDAGTMAS---LMPAVTNTSSDNVLYVK------ 254
+ FD L VC + + DLG + + S ++ N+ +Y K
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLS--MYSKCGRFDD 292
Query: 255 --DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+F + + V+WN MI+ Y+++ + ++ + +M S V PDAIT +S+LP+
Sbjct: 293 ASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSK 352
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
L ++IH Y+ R + ++ L ++LID Y +C + AQ +F + DV +T++
Sbjct: 353 FENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAM 412
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK----VYFKQMT 428
IS Y G ++L +F + ISP+ I V+IL L+ G+ K+
Sbjct: 413 ISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
D+ R ++D+ + GR++ AY++ +++ + + W ++++ C
Sbjct: 473 DN-----RCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRC 517
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 174/381 (45%), Gaps = 36/381 (9%)
Query: 31 IAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDE 90
I L ++ ++ ++ K +H ++ + + L L+ AY C A+ +F +
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 91 ISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFG 150
+ +VV + MI Y++N Y D+L +FR +V P+ T +L L+ G
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 151 LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
+LHG ++K D +G +I MY KCG + A + + + +RD+VSWNSM+ AQ+
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV-------------------- 250
A+++ R+M G D ++++ + A N S++
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 251 -----LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEV 296
+Y K ++F +++K++VSWN +I + +++ L+ +M EKS +
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 297 EPDAITCASVLPACGDLSALLLG-RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
PD IT ++ +C + + G R E ++P ++D++ R G L +A
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 356 KVFDKMKF-RDVASWTSLISA 375
+ M F D W +L+ A
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGA 721
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 145/327 (44%), Gaps = 41/327 (12%)
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR---YVLDEMP 193
+L+ACS + LR G Q+H ++ + + + ++ MY CG + Y LD +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD-LR 99
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA------------ 241
R + WNS+++ + +N + AL +M G PD T L+ A
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 242 ----VTNTSSDNVLYV-----------------KDIFINLEKKSLVSWNVMITVYMKNSM 280
V++ D +V +F + +K V WNVM+ Y K
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
+ I + M ++ P+A+T VL C + LG ++H V + ++NS
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
L+ MY++CG +DA K+F M D +W +IS Y +G +L F EM +SG+ PD
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQM 427
I F ++L + S LE Y KQ+
Sbjct: 340 AITFSSLLPSVSKFENLE----YCKQI 362
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR- 364
+L AC + + L G+++H ++ + + + ++ MYA CG D K+F ++ R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 365 -DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC------------ 411
+ W S+IS++ G ALA + +M G+SPD F ++ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 412 ----SHSGL--------------LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
S G+ LE GK+ D + + +++ + G +
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 454 D---EAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSP---EQSGYYV 507
D + + V++ + PN + +LS C +D+G + L+ +S E S
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLG-VQLHGLVVVSGVDFEGSIKNS 279
Query: 508 LLSNIYAKAGRWKEVTEVRSLMKR 531
LLS +Y+K GR+ + +++ +M R
Sbjct: 280 LLS-MYSKCGRFDDASKLFRMMSR 302
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/451 (42%), Positives = 290/451 (64%), Gaps = 8/451 (1%)
Query: 227 GQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
G D+ M +LM + + +N +F + K+ VSWNV+ + Y++N + +
Sbjct: 143 GFLSDSLLMTTLMDLYS--TCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLV 200
Query: 287 LYLQMEKSE---VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
L+ +M+ V+PD +TC L AC +L AL G+++H++++ L L L N+L+
Sbjct: 201 LFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVS 260
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
MY+RCG ++ A +VF M+ R+V SWT+LIS M G G A+ F+EM GISP+
Sbjct: 261 MYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQT 320
Query: 404 FVAILSACSHSGLLEEGKVYFKQM-TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
+LSACSHSGL+ EG ++F +M + +++I P + H+ C+VDLLGRA +D+AY +IK
Sbjct: 321 LTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKS 380
Query: 463 MPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEV 522
M ++P+ +W TLL +CRV+ ++++G +L++L E++G YVLL N Y+ G+W++V
Sbjct: 381 MEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKV 440
Query: 523 TEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYV 582
TE+RSLMK +RI PG S +EL VH F+ D SHP+ +EIY+ L + ++K GYV
Sbjct: 441 TELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 583 PETDSALHDVEEEDKEGH-LAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKL 640
E S LH++E E+++G+ L HSEKLAI F +L T + IR+TKNLR C DCH AK
Sbjct: 501 AEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKF 560
Query: 641 ISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+S + R +++RD +RFHHFK G CSC D+W
Sbjct: 561 VSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 143/286 (50%), Gaps = 12/286 (4%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
D++ +H K+ + L LM Y+ C A KVFDEI +R+ V +NV+
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFS 187
Query: 105 SYVNNRWYNDALLVFREM---VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR 161
Y+ N+ D L++F +M V+G +PD T L+AC+ L FG Q+H + +
Sbjct: 188 CYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENG 247
Query: 162 LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR 221
L L + N L+SMY +CG + +A V M R+VVSW ++++G A N +A+E
Sbjct: 248 LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFN 307
Query: 222 EMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLE---KKSLVSWNVMITVYM 276
EM G P+ T+ L+ A +++ ++ +++ D + E K +L + ++ +
Sbjct: 308 EMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFF-DRMRSGEFKIKPNLHHYGCVVDLLG 366
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
+ + A L M E++PD+ ++L AC + LG R+
Sbjct: 367 RARLLDKAYSLIKSM---EMKPDSTIWRTLLGACRVHGDVELGERV 409
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 40/335 (11%)
Query: 86 KVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDN-YTYPCVLKACSCS 144
+VF + + N MIR++ ++ + +FR + P N + LK C S
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 145 DNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMV 204
+L GLQ+HG + + + L+ +Y C +A V DE+P+RD VSWN +
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 205 AGYAQNMRFDDALEVCREMD---DLGQKPDAGTMASLMPAVTNTSS-------------- 247
+ Y +N R D L + +M D KPD T + A N +
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 248 --------DNVLY-----------VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY 288
N L +F + ++++VSW +I+ N AI+ +
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK--KLRPNLLLENSLIDMYA 346
+M K + P+ T +L AC + G + + K++PNL ++D+
Sbjct: 307 NEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLG 366
Query: 347 RCGCLEDAQKVFDKMKFR-DVASWTSLISAYGMTG 380
R L+ A + M+ + D W +L+ A + G
Sbjct: 367 RARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 8/268 (2%)
Query: 249 NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP-DAITCASVL 307
++ Y +F +L N MI + + P L+ + ++ P + ++ + L
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 308 PACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
C LL G +IH + + LL +L+D+Y+ C DA KVFD++ RD
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 368 SWTSLISAYGMTGQGCNALALFSEMQN---SGISPDHIAFVAILSACSHSGLLEEGKVYF 424
SW L S Y + + L LF +M+N + PD + + L AC++ G L+ GK
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGK-QV 239
Query: 425 KQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSN 484
D+ ++ + LV + R G +D+AY V M E N W L+S +
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGF 298
Query: 485 MDIGLLAADNLLQ--LSPEQSGYYVLLS 510
+ A + +L+ +SPE+ LLS
Sbjct: 299 GKEAIEAFNEMLKFGISPEEQTLTGLLS 326
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/525 (37%), Positives = 315/525 (60%), Gaps = 41/525 (7%)
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR---EMDDLGQKPDAGTMASLM-- 239
AR++ + M D+V +NSM GY+ RF + LEV E+ + G PD T SL+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYS---RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKA 138
Query: 240 -----------------------------PAVTN--TSSDNVLYVKDIFINLEKKSLVSW 268
P + N T ++V + +F + + +V +
Sbjct: 139 CAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCY 198
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N MIT Y + + P A+ L+ +M+ ++P+ IT SVL +C L +L LG+ IH+Y ++
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
+ + +LIDM+A+CG L+DA +F+KM+++D +W+++I AY G+ ++ +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
F M++ + PD I F+ +L+ACSH+G +EEG+ YF QM + I P I+H+ +VDLL
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 449 RAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVL 508
RAG +++AY+ I ++P+ P +W LL++C ++N+D+ ++ + +L G YV+
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 509 LSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEE 568
LSN+YA+ +W+ V +R +MK R+ K PG S++E+N+ VH F +GD + +++
Sbjct: 439 LSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRA 498
Query: 569 LYVLVGKMKELGYVPETDSALH-DVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITK 626
L +V ++K GYVP+T +H ++ +++KE L HSEKLAI F LLNT + IR+ K
Sbjct: 499 LDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVK 558
Query: 627 NLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
NLRVC DCH AAKLIS I GR++V+RD RFHHF+DG CSCGD+W
Sbjct: 559 NLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 39/329 (11%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYN--DALLVFREMVNGGFRPDNYTYPCVLKAC 141
AR +F+ +SE ++V +N M R Y +R+ N + +F E++ G PDNYT+P +LKAC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGY--SRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 142 SCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWN 201
+ + L G QLH +K+ LD N++V LI+MY +C + AR V D + VV +N
Sbjct: 140 AVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYN 199
Query: 202 SMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV----------- 250
+M+ GYA+ R ++AL + REM KP+ T+ S++ + S ++
Sbjct: 200 AMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 251 ---LYVK-------------------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY 288
YVK IF + K +W+ MI Y + ++ ++
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRR-IHEYVERKKLRPNLLLENSLIDMYAR 347
+M V+PD IT +L AC + GR+ + V + + P++ S++D+ +R
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 348 CGCLEDAQKVFDKMKFRDVAS-WTSLISA 375
G LEDA + DK+ W L++A
Sbjct: 380 AGNLEDAYEFIDKLPISPTPMLWRILLAA 408
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 147/294 (50%), Gaps = 6/294 (2%)
Query: 231 DAGTMASLMPAVTNTSSDNVL-YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYL 289
D +A L+ T + +++ + Y + +F + + +V +N M Y + + P L++
Sbjct: 59 DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFV 118
Query: 290 QMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCG 349
++ + + PD T S+L AC AL GR++H + L N+ + +LI+MY C
Sbjct: 119 EILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE 178
Query: 350 CLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILS 409
++ A+ VFD++ V + ++I+ Y + AL+LF EMQ + P+ I +++LS
Sbjct: 179 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLS 238
Query: 410 ACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNE 469
+C+ G L+ GK + + + ++ L+D+ + G +D+A + ++M + +
Sbjct: 239 SCALLGSLDLGK-WIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DT 296
Query: 470 RVWGTLLSSCRVYSNMDIGLLAADNLL--QLSPEQSGYYVLLSNIYAKAGRWKE 521
+ W ++ + + + +L + + + P++ + LL N + GR +E
Sbjct: 297 QAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLL-NACSHTGRVEE 349
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 128/282 (45%), Gaps = 10/282 (3%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H + L +N + L+ Y C + +AR VFD I E VV YN MI Y
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
N+AL +FREM +P+ T VL +C+ +L G +H K + V
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
LI M+ KCG L +A + ++M +D +W++M+ YA + + + ++ + M +
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 230 PDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK-----SLVSWNVMITVYMKNSMPGNA 284
PD T L+ A ++T V + F + K S+ + M+ + S GN
Sbjct: 329 PDEITFLGLLNACSHTG--RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL---SRAGNL 383
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
D Y ++K + P + +L AC + L L ++ E +
Sbjct: 384 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERI 425
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/637 (34%), Positives = 354/637 (55%), Gaps = 54/637 (8%)
Query: 50 KNVHTKLIYLNSHENPS--LGIKLMRAYAACGEPGTARKVFDEI--SERNVVFYNVMIRS 105
K +H L + P L L + YA+ GE TA+K+FDEI SE++ V + ++ S
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 106 YVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN 165
+ +++ +F EM D+ + C+ C+ ++L F Q HG +K+ + +
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTS 145
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
+ V N L+ MYGKCG + E + + +E+ + VVSW ++ + + LE RE
Sbjct: 146 VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW----EGLERGRE--- 198
Query: 226 LGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAI 285
+F + +++ V+W VM+ Y+ +
Sbjct: 199 ------------------------------VFHEMPERNAVAWTVMVAGYLGAGFTREVL 228
Query: 286 DLYLQME-KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR-------PNLLL 337
+L +M + + +T S+L AC L++GR +H Y +K++ ++++
Sbjct: 229 ELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMV 288
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
+L+DMYA+CG ++ + VF M+ R+V +W +L S M G+G + +F +M +
Sbjct: 289 GTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-V 347
Query: 398 SPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAY 457
PD + F A+LSACSHSG+++EG F + Y + P+++H+AC+VDLLGRAG ++EA
Sbjct: 348 KPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAE 406
Query: 458 DVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAG 517
++++MP+ PNE V G+LL SC V+ ++I L+Q+SP + Y +L+SN+Y G
Sbjct: 407 ILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEG 466
Query: 518 RWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMK 577
R +R +++R IRK PG+S++ +N VH F +GD SHP++KEIY +L ++ +++
Sbjct: 467 RSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIR 526
Query: 578 ELGYVPETDSALHDVEE--EDKEGHLAVHSEKLAIVFALLNTHES-PIRITKNLRVCGDC 634
GYVP+ + E E+KE L HSEKLA+ F LL T S P+ + KNLR+C DC
Sbjct: 527 SAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDC 586
Query: 635 HIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
H A K++SK+ REI+IRD NRFH FK G CSC DYW
Sbjct: 587 HSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLR--PNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
+L C S L G+ +H + L+ P L N+L YA G + AQK+FD++
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 364 --RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH---SGLLE 418
+D WT+L+S++ G N++ LF EM+ + D ++ V + C+ G +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 419 EGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
+G +M + ++ L+D+ G+ G V E + +++ E + W +L +
Sbjct: 132 QGHGVAVKMG----VLTSVKVCNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLDT 186
Query: 479 CRVYSNMDIGLLAADNLLQLSPEQSGY-YVLLSNIYAKAGRWKEVTEVRSLMKRR 532
+ ++ G + PE++ + ++ Y AG +EV E+ + M R
Sbjct: 187 VVKWEGLERG----REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFR 237
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/644 (36%), Positives = 345/644 (53%), Gaps = 51/644 (7%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
SL K++ Y A +FDE+ R+VV +N MI V N A+ +F EM
Sbjct: 67 SLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM--- 123
Query: 126 GFRPDN--YTYPCVLKACSCSDNLRFGLQLHGAM-LKVRLDWNLFVGNGLISMYGKCGCL 182
P+ ++ ++ C S + +L M +K WN ++ Y + G +
Sbjct: 124 ---PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN-----SMVHGYLQFGKV 175
Query: 183 LEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
+A + +MP ++V+SW +M+ G QN R +AL++ + M K + ++ A
Sbjct: 176 DDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITAC 235
Query: 243 TNTSSDNV------LYVKDIFINLE--KKSLVS-------------------------WN 269
N + ++ L +K F+ E SL++ W
Sbjct: 236 ANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 270 VMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
+++ Y N +A+ ++ M ++ + P+ T AS L +C L L G+ +H +
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
L + + NSL+ MY+ G + DA VF K+ + + SW S+I G+G A +F
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY-RITPRIEHFACLVDLLG 448
+M PD I F +LSACSH G LE+G+ F M+ I +I+H+ C+VD+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 449 RAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVL 508
R G++ EA ++I++M ++PNE VW LLS+CR++S++D G AA + L + S YVL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 509 LSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEE 568
LSNIYA AGRW V+++R MK+ I K PG S V + + H F +GD P IYE+
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEK 593
Query: 569 LYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKN 627
L L K+KELGY P+ SALHDVE+E KE L HSE+LAI F L+NT E S + + KN
Sbjct: 594 LEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKN 653
Query: 628 LRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
LRVC DCH KLIS +VGREIV+RD RFHHFK+G CSCGDYW
Sbjct: 654 LRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 204/488 (41%), Gaps = 101/488 (20%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP--DNYTYPCVLKAC 141
AR+VF+++ +V Y MI Y + DAL +F EM P D ++ ++ C
Sbjct: 54 AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM------PVRDVVSWNSMISGC 107
Query: 142 SCSDNLRFGLQLHGAM-LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSW 200
++ ++L M + + W V NG + G + +A + +MP +D +W
Sbjct: 108 VECGDMNTAVKLFDEMPERSVVSWTAMV-NGCF----RSGKVDQAERLFYQMPVKDTAAW 162
Query: 201 NSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINL 260
NSMV GY Q + DDAL++ ++M P
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQM----------------PG------------------- 187
Query: 261 EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGR 320
K+++SW MI +N G A+DL+ M + ++ + V+ AC + A +G
Sbjct: 188 --KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 321 RIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTG 380
++H + + + SLI YA C + D++KVFD+ VA WT+L+S Y +
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 381 QGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK------VYFKQMTDDYR-- 432
+ +AL++FS M + I P+ F + L++CS G L+ GK V TD +
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 433 ----------------------ITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEP 467
I + ++ + GR A+ + QM EP
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 468 NERVWGTLLSSC----------RVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAG 517
+E + LLS+C +++ M G+ D +Q +Y + +I + G
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQ-------HYTCMVDILGRCG 478
Query: 518 RWKEVTEV 525
+ KE E+
Sbjct: 479 KLKEAEEL 486
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 37/350 (10%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VH +I L + L+ YA C G +RKVFDE V + ++ Y N+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+ DAL +F M+ P+ T+ L +CS L +G ++HG +K+ L+ + FVGN
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
L+ MY G + +A V ++ ++ +VSWNS++ G AQ+ R A + +M L ++P
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 231 DAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ 290
D T L+ A ++ F+ +K + YM + + N ID +Q
Sbjct: 426 DEITFTGLLSACSHCG----------FLEKGRK--------LFYYMSSGI--NHIDRKIQ 465
Query: 291 MEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID---MYAR 347
V+ +L CG L + E +ER ++PN ++ +L+ M++
Sbjct: 466 HYTCMVD--------ILGRCGKL------KEAEELIERMVVKPNEMVWLALLSACRMHSD 511
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
E A + + A++ L + Y G+ N L +M+ +GI
Sbjct: 512 VDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGI 561
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 317 LLGRRIHEYVE--RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
LL RRI E E + P++ L +I Y R L DA +FD+M RDV SW S+IS
Sbjct: 46 LLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMIS 105
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
G A+ LF EM + +++ A+++ C SG +++ + F QM
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMP-----V 156
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
+ +V + G+VD+A + KQMP N W T++
Sbjct: 157 KDTAAWNSMVHGYLQFGKVDDALKLFKQMP-GKNVISWTTMI 197
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/483 (37%), Positives = 293/483 (60%), Gaps = 38/483 (7%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFR-PDNYTYPCVLKACS 142
A ++F+++S NV YN +IR+Y +N Y D + ++++++ F PD +T+P + K+C+
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 143 CSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
+ G Q+HG + K +++ N LI MY K L++A V DEM RDV+SWNS
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 203 MVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK 262
+++GYA+ LGQ A K +F +
Sbjct: 181 LLSGYAR----------------LGQMKKA---------------------KGLFHLMLD 203
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
K++VSW MI+ Y A+D + +M+ + +EPD I+ SVLP+C L +L LG+ I
Sbjct: 204 KTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWI 263
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
H Y ER+ + N+LI+MY++CG + A ++F +M+ +DV SW+++IS Y G
Sbjct: 264 HLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNA 323
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
A+ F+EMQ + + P+ I F+ +LSACSH G+ +EG YF M DY+I P+IEH+ C
Sbjct: 324 HGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGC 383
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ 502
L+D+L RAG+++ A ++ K MP++P+ ++WG+LLSSCR N+D+ L+A D+L++L PE
Sbjct: 384 LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPED 443
Query: 503 SGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQS 562
G YVLL+NIYA G+W++V+ +R +++ ++KTPG S +E+N+ V F++GD S P
Sbjct: 444 MGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFW 503
Query: 563 KEI 565
EI
Sbjct: 504 TEI 506
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 41/316 (12%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE-PDAITCASVLPAC 310
Y +F + ++ +N +I Y NS+ + I +Y Q+ + E PD T + +C
Sbjct: 60 YATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSC 119
Query: 311 GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWT 370
L + LG+++H ++ + R +++ EN+LIDMY + L DA KVFD+M RDV SW
Sbjct: 120 ASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWN 179
Query: 371 SLISAY-----------------------------GMTGQGC--NALALFSEMQNSGISP 399
SL+S Y G TG GC A+ F EMQ +GI P
Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEP 239
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
D I+ +++L +C+ G LE GK + + + L+++ + G + +A +
Sbjct: 240 DEISLISVLPSCAQLGSLELGK-WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 460 IKQMPLEPNERV-WGTLLSSCRVYSNMDIGLLAADNLLQ---LSPEQSGYYVLLSNIYAK 515
QM E + + W T++S + N G + N +Q + P + LLS +
Sbjct: 299 FGQM--EGKDVISWSTMISGYAYHGNAH-GAIETFNEMQRAKVKPNGITFLGLLSAC-SH 354
Query: 516 AGRWKEVTEVRSLMKR 531
G W+E +M++
Sbjct: 355 VGMWQEGLRYFDMMRQ 370
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ YA G+ A+ +F + ++ +V + MI Y Y +A+ FREM G PD
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ VL +C+ +L G +H + V N LI MY KCG + +A +
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SD 248
+M +DV+SW++M++GYA + A+E EM KP+ T L+ A ++ +
Sbjct: 301 QMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQE 360
Query: 249 NVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVL 307
+ Y + + + + + + +I V + A+++ M ++PD+ S+L
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM---PMKPDSKIWGSLL 417
Query: 308 PAC---GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
+C G+L L+ +E + + +LL N +YA G ED ++
Sbjct: 418 SSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLAN----IYADLGKWEDVSRL 466
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 300/507 (59%), Gaps = 35/507 (6%)
Query: 200 WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS------------ 247
+N+M+ GY M F++AL EM G +PD T L+ A T S
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 248 ----DNVLYVKDIFIN-----------------LEKKSLVSWNVMITVYMKNSMPGNAID 286
+ ++V++ IN LE K+ SW+ M++ M +
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 287 LYLQM-EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
L+ M ++ ++ + S L AC + AL LG IH ++ R N++++ SL+DMY
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
+CGCL+ A +F KM+ R+ +++++IS + G+G +AL +FS+M G+ PDH+ +V
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 406 AILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPL 465
++L+ACSHSGL++EG+ F +M + ++ P EH+ CLVDLLGRAG ++EA + I+ +P+
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPI 399
Query: 466 EPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEV 525
E N+ +W T LS CRV N+++G +AA LL+LS G Y+L+SN+Y++ W +V
Sbjct: 400 EKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVART 459
Query: 526 RSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPET 585
R+ + + +++TPG S VEL + H F++ D SHP+ KEIY+ L+ + ++K GY P+
Sbjct: 460 RTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDL 519
Query: 586 DSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKI 644
L +V+EE+K+ L HS+K+AI F LL T S I+I +NLR+C DCH K IS I
Sbjct: 520 TQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMI 579
Query: 645 VGREIVIRDTNRFHHFKDGLCSCGDYW 671
REIV+RD NRFH FK G CSC DYW
Sbjct: 580 YEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 162/327 (49%), Gaps = 36/327 (11%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A +F I + +N MIR YVN + +AL + EM+ G PDN+TYPC+LKAC+
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
++R G Q+HG + K+ L+ ++FV N LI+MYG+CG + + V +++ + SW+SM
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 204 VAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMPAVTNTSSDNV------------ 250
V+ A + + L + R M + K + M S + A NT + N+
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 251 -------------LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYL 289
+YVK IF +EK++ ++++ MI+ + +A+ ++
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 290 QMEKSEVEPDAITCASVLPACGDLSALLLGRRIH-EYVERKKLRPNLLLENSLIDMYARC 348
+M K +EPD + SVL AC + GRR+ E ++ K+ P L+D+ R
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 349 GCLEDAQKVFDKMKF-RDVASWTSLIS 374
G LE+A + + ++ W + +S
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 140/293 (47%), Gaps = 13/293 (4%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
Y IF ++ +N MI Y+ A+ Y +M + EPD T +L AC
Sbjct: 84 YAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 143
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
L ++ G++IH V + L ++ ++NSLI+MY RCG +E + VF+K++ + ASW+S
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 372 LISAYGMTGQGCNALALFSEM-QNSGISPDHIAFVAILSACSHSGLLEEGKV---YFKQM 427
++SA G L LF M + + + V+ L AC+++G L G + +
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDI 487
+ I + LVD+ + G +D+A + ++M + N + ++S ++ +
Sbjct: 264 ISELNIIVQTS----LVDMYVKCGCLDKALHIFQKME-KRNNLTYSAMISGLALHGEGES 318
Query: 488 GLLAADNLLQ--LSPEQSGYYVLLSNIYAKAGRWKEVTEVRS-LMKRRRIRKT 537
L +++ L P+ Y +L N + +G KE V + ++K ++ T
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVL-NACSHSGLVKEGRRVFAEMLKEGKVEPT 370
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 107/211 (50%), Gaps = 1/211 (0%)
Query: 36 LGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERN 95
L KA + I K +H ++ L + + L+ Y CGE + VF+++ +
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKT 197
Query: 96 VVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
++ M+ + +++ LL+FR M + + + L AC+ + L G+ +H
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
G +L+ + N+ V L+ MY KCGCL +A ++ +M +R+ +++++M++G A + +
Sbjct: 258 GFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE 317
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
AL + +M G +PD S++ A +++
Sbjct: 318 SALRMFSKMIKEGLEPDHVVYVSVLNACSHS 348
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/527 (35%), Positives = 302/527 (57%), Gaps = 49/527 (9%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+G L+ Y+ CG A++VFDE+ +RNVV +N +I + N +AL VF+ M+
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR 248
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKV-RLDWNLFVGNGLISMYGKCGCLLEA 185
PD T V+ AC+ ++ G ++HG ++K +L ++ + N + MY KC + EA
Sbjct: 249 VEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEA 308
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
R++ D MP R+V++ SM++GYA M A T
Sbjct: 309 RFIFDSMPIRNVIAETSMISGYA------------------------------MAASTKA 338
Query: 246 SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
+ + +F + ++++VSWN +I Y +N A+ L+ +++ V P + A+
Sbjct: 339 A-------RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLR------PNLLLENSLIDMYARCGCLEDAQKVFD 359
+L AC DL+ L LG + H +V + + ++ + NSLIDMY +CGC+E+ VF
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 451
Query: 360 KMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE 419
KM RD SW ++I + G G AL LF EM SG PDHI + +LSAC H+G +EE
Sbjct: 452 KMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEE 511
Query: 420 GKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
G+ YF MT D+ + P +H+ C+VDLLGRAG ++EA +I++MP++P+ +WG+LL++C
Sbjct: 512 GRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAAC 571
Query: 480 RVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPG 539
+V+ N+ +G A+ LL++ P SG YVLLSN+YA+ G+W++V VR M++ + K PG
Sbjct: 572 KVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPG 631
Query: 540 ISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETD 586
S +++ H F+ D SHP+ K+I+ L +L+ +M+ PE D
Sbjct: 632 CSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR-----PEQD 673
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 193/431 (44%), Gaps = 114/431 (26%)
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV--------------- 197
+H +++K +F+ N LI Y KCG L + R V D+MP+R++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 198 ----------------VSWNSMVAGYAQNMRFDDA----------------------LEV 219
+WNSMV+G+AQ+ R ++A L
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 220 CREMDDLGQKPDAGTMASLMPAVTN-----------TSSDNVLYVKDIFINLEKKSLVSW 268
C ++D+ + ++ + P +++ + NV + +F + +++VSW
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW 221
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH-EYVE 327
N +IT + +N A+D++ M +S VEPD +T ASV+ AC LSA+ +G+ +H V+
Sbjct: 222 NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 328 RKKLRPNLLLENSLIDMYARCGCLEDAQKVFD---------------------------- 359
KLR +++L N+ +DMYA+C +++A+ +FD
Sbjct: 282 NDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARL 341
Query: 360 ---KMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC----- 411
KM R+V SW +LI+ Y G+ AL+LF ++ + P H +F IL AC
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 412 ------SHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPL 465
+H +L+ G + DD + L+D+ + G V+E Y V ++M +
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNS------LIDMYVKCGCVEEGYLVFRKM-M 454
Query: 466 EPNERVWGTLL 476
E + W ++
Sbjct: 455 ERDCVSWNAMI 465
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 36/212 (16%)
Query: 299 DAITCASVLPAC--GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
D+ A +L +C LSA+ + R +H V + + ++N LID Y++CG LED ++
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 357 VFDKMKFRDV-------------------------------ASWTSLISAYGMTGQGCNA 385
VFDKM R++ +W S++S + + A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 386 LALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVD 445
L F+ M G + +F ++LSACS + +G V + + + LVD
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG-VQVHSLIAKSPFLSDVYIGSALVD 195
Query: 446 LLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+ + G V++A V +M + N W +L++
Sbjct: 196 MYSKCGNVNDAQRVFDEMG-DRNVVSWNSLIT 226
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/560 (36%), Positives = 310/560 (55%), Gaps = 41/560 (7%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
+K +H ++I N HE+ + KL+ A + C + A +VF+++ E NV N +IR++
Sbjct: 35 VKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQ 94
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
N A VF EM G DN+TYP +LKACS L +H + K+ L +++V
Sbjct: 95 NSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYV 154
Query: 169 GNGLISMYGKCGC---------------------------------LLEARYVLDEMPRR 195
N LI Y +CG L +AR + DEMP+R
Sbjct: 155 PNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR 214
Query: 196 DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKD 255
D++SWN+M+ GYA+ A E+ +M P+ T++ + + + ++ +
Sbjct: 215 DLISWNTMLDGYARCREMSKAFELFEKM------PERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 256 IF--INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+F + L K++V+W ++I Y + + A L QM S ++ DA S+L AC +
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
L LG RIH ++R L N + N+L+DMYA+CG L+ A VF+ + +D+ SW +++
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTML 388
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
G+ G G A+ LFS M+ GI PD + F+A+L +C+H+GL++EG YF M Y +
Sbjct: 389 HGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDL 448
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAAD 493
P++EH+ CLVDLLGR GR+ EA V++ MP+EPN +WG LL +CR+++ +DI D
Sbjct: 449 VPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLD 508
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFL 553
NL++L P G Y LLSNIYA A W+ V ++RS MK + K G S+VEL +H F
Sbjct: 509 NLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFT 568
Query: 554 AGDTSHPQSKEIYEELYVLV 573
D SHP+S +IY+ L L+
Sbjct: 569 VFDKSHPKSDQIYQMLGSLI 588
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 163/378 (43%), Gaps = 51/378 (13%)
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
NL QLH +++ L +L + LIS C A V +++ +V NS++
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 206 GYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSL 265
+AQN + A V EM G D T L+ A + S V VK + ++EK L
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV--VKMMHNHIEKLGL 148
Query: 266 VS----WNVMITVYMKNSMPG--NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
S N +I Y + G +A+ L+ +M E D ++ S+L L
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS----ERDTVSWNSMLGGLVKAGELRDA 204
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARC------------------------------- 348
RR+ + + ++ +L+ N+++D YARC
Sbjct: 205 RRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 349 GCLEDAQKVFDKMKF--RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVA 406
G +E A+ +FDKM ++V +WT +I+ Y G A L +M SG+ D A ++
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 407 ILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE 466
IL+AC+ SGLL G + + + L+D+ + G + +A+DV +P +
Sbjct: 321 ILAACTESGLLSLG-MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP-K 378
Query: 467 PNERVWGTLLSSCRVYSN 484
+ W T+L V+ +
Sbjct: 379 KDLVSWNTMLHGLGVHGH 396
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/588 (36%), Positives = 329/588 (55%), Gaps = 49/588 (8%)
Query: 42 QYPDIIALKNVHTKLI---YLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVF 98
Q D ++ + +H ++ +L+ ++P G L+ YA CG A VF SER+V
Sbjct: 72 QRKDYVSGQQIHGFMVRKGFLD--DSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFG 128
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFG--LQLHGA 156
YN +I +V N DA+ +REM G PD YT+P +LK SD + ++HG
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG---SDAMELSDVKKVHGL 185
Query: 157 MLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDD 215
K+ D + +VG+GL++ Y K + +A+ V DE+P R D V WN++V GY+Q RF+D
Sbjct: 186 AFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFED 245
Query: 216 ALEVCREMDDLGQKPDAGTMASLMPAVT------NTSSDNVLYVK--------------- 254
AL V +M + G T+ S++ A T N S + L VK
Sbjct: 246 ALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALID 305
Query: 255 ------------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
IF ++++ L +WN ++ V+ + L+ +M S + PD +T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKL----RPNLLLENSLIDMYARCGCLEDAQKVF 358
+VLP CG L++L GR IH Y+ L N + NSL+DMY +CG L DA+ VF
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
Query: 359 DKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLE 418
D M+ +D ASW +I+ YG+ G AL +FS M +G+ PD I FV +L ACSHSG L
Sbjct: 426 DSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLN 485
Query: 419 EGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
EG+ + QM Y I P +H+AC++D+LGRA +++EAY++ P+ N VW ++LSS
Sbjct: 486 EGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSS 545
Query: 479 CRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTP 538
CR++ N D+ L+A L +L PE G YVL+SN+Y +AG+++EV +VR M+++ ++KTP
Sbjct: 546 CRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTP 605
Query: 539 GISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETD 586
G S + L + VHTF G+ +HP+ K I++ L +++ M Y+ D
Sbjct: 606 GCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYMTVDD 653
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 140/319 (43%), Gaps = 35/319 (10%)
Query: 137 VLKACSCSDNLRFGLQLHGAML-KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR 195
L+ C+ + G Q+HG M+ K LD + G L++MY KCG + A V R
Sbjct: 66 TLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SER 124
Query: 196 DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN----------- 244
DV +N++++G+ N DA+E REM G PD T SL+
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHG 184
Query: 245 ------------------TSSDNVLYVKD---IFINL-EKKSLVSWNVMITVYMKNSMPG 282
TS + V+D +F L ++ V WN ++ Y +
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 283 NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLI 342
+A+ ++ +M + V T SVL A + GR IH + ++++ N+LI
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 343 DMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHI 402
DMY + LE+A +F+ M RD+ +W S++ + G LALF M SGI PD +
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 403 AFVAILSACSHSGLLEEGK 421
+L C L +G+
Sbjct: 365 TLTTVLPTCGRLASLRQGR 383
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
TC + L C + G++IH ++ RK L + SL++MYA+CG + A VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 361 MKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
+ RDV + +LIS + + G +A+ + EM+ +GI PD F ++L L +
Sbjct: 122 SE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK 180
Query: 421 KVY---FKQMTD-DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
KV+ FK D D + + LV + V++A V ++P + +W L+
Sbjct: 181 KVHGLAFKLGFDSDCYVG------SGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALV 234
Query: 477 S 477
+
Sbjct: 235 N 235
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/515 (38%), Positives = 291/515 (56%), Gaps = 37/515 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y G+ AR VFD + R+V+ +N MI Y N + NDAL++F MVN D
Sbjct: 158 LLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLD 217
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ T +L C +L G +H + + RL + V N L++MY KCG + EAR+V D
Sbjct: 218 HATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFD 277
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDN- 249
M RRDV++W M+ GY ++ ++ALE+CR M G +P+A T+ASL+ + N
Sbjct: 278 RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND 337
Query: 250 ------------------------VLYVK--------DIFINLEKKSLVSWNVMITVYMK 277
+Y K +F K W+ +I ++
Sbjct: 338 GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQ 397
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
N + +A+ L+ +M + +VEP+ T S+LPA L+ L IH Y+ + +L
Sbjct: 398 NELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 338 ENSLIDMYARCGCLEDAQKVF----DKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ 393
L+ +Y++CG LE A K+F +K K +DV W +LIS YGM G G NAL +F EM
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 394 NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
SG++P+ I F + L+ACSHSGL+EEG F+ M + Y+ R H+ C+VDLLGRAGR+
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 454 DEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIY 513
DEAY++I +P EP VWG LL++C + N+ +G +AA+ L +L PE +G YVLL+NIY
Sbjct: 578 DEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIY 637
Query: 514 AKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQ 548
A GRWK++ +VRS+M+ +RK PG S +E+ S
Sbjct: 638 AALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSN 672
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/523 (26%), Positives = 244/523 (46%), Gaps = 76/523 (14%)
Query: 74 AYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFR--PDN 131
YA CG ARK+F+E+ + +++ YN++IR YV Y+DA+ VF MV+ G + PD
Sbjct: 58 TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 117
Query: 132 YTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDE 191
YTYP V KA +++ GL +HG +L+ + +V N L++MY G + AR V D
Sbjct: 118 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 192 MPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA---------- 241
M RDV+SWN+M++GY +N +DAL + M + D T+ S++P
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 242 ------VTNTSSDNVLYVKDIFIN-----------------LEKKSLVSWNVMITVYMKN 278
V + + VK+ +N +E++ +++W MI Y ++
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 279 SMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLE 338
NA++L M+ V P+A+T AS++ CGD + G+ +H + R+++ ++++E
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 339 NSLIDMYARC--------------------------GCLE-----DAQKVFDKMKFRDV- 366
SLI MYA+C GC++ DA +F +M+ DV
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 367 ---ASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
A+ SL+ AY A+ + + +G A ++ S G LE
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 424 FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCR 480
F + + ++ + + + L+ G G A V +M + PNE + + L++C
Sbjct: 478 FNGIQEKHK-SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 481 VYSNMDIGLLAADNLLQ--LSPEQSGYYVLLSNIYAKAGRWKE 521
++ GL +L+ + +S +Y + ++ +AGR E
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 124/225 (55%), Gaps = 3/225 (1%)
Query: 241 AVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE--P 298
+VT ++ Y + +F + + SL+S+N++I +Y++ + +AI ++++M V+ P
Sbjct: 56 SVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVP 115
Query: 299 DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVF 358
D T V A G+L ++ LG +H + R + ++N+L+ MY G +E A+ VF
Sbjct: 116 DGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF 175
Query: 359 DKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLE 418
D MK RDV SW ++IS Y G +AL +F M N + DH V++L C H LE
Sbjct: 176 DVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLE 235
Query: 419 EGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
G+ K + ++ R+ +IE LV++ + GR+DEA V +M
Sbjct: 236 MGRNVHK-LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 44 PDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER----NVVFY 99
D+ N+H L + L+ Y+ CG +A K+F+ I E+ +VV +
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 100 NVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML- 158
+I Y + ++AL VF EMV G P+ T+ L ACS S + GL L ML
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 159 --KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVS-WNSMVAG 206
K N + ++ + G+ G L EA ++ +P + W +++A
Sbjct: 554 HYKTLARSNHY--TCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 602
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/584 (35%), Positives = 321/584 (54%), Gaps = 56/584 (9%)
Query: 142 SCSDNLRFGLQLHGAMLKVRLD---WNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV 198
+CSD + QLH L+ LF+ ++ + + A V D +
Sbjct: 57 TCSDMSQLK-QLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSF 115
Query: 199 SWNSMVAGYAQNM-RFDDALEVCREMDDLGQK-PDAGTMASLMPA--------------- 241
WN+++ A ++ R ++A + R+M + G+ PD T ++ A
Sbjct: 116 MWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHC 175
Query: 242 -VTNTSSDNVLYV-----------------KDIFINLEKKSLVSWNVMITVYMKNSMPGN 283
+ +YV + +F + ++SLVSWN MI ++ +
Sbjct: 176 QIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDS 235
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK---KLRPNLLLENS 340
A+ L+ +M++S EPD T SVL AC L +L LG H ++ RK + ++L++NS
Sbjct: 236 ALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNS 294
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM--QNSGIS 398
LI+MY +CG L A++VF M+ RD+ASW ++I + G+ A+ F M + +
Sbjct: 295 LIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVR 354
Query: 399 PDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYD 458
P+ + FV +L AC+H G + +G+ YF M DY I P +EH+ C+VDL+ RAG + EA D
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAID 414
Query: 459 VIKQMPLEPNERVWGTLLSSC-RVYSNMDIGLLAADNLLQLSPEQ-------SGYYVLLS 510
++ MP++P+ +W +LL +C + +++++ A N++ + SG YVLLS
Sbjct: 415 MVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLS 474
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELY 570
+YA A RW +V VR LM IRK PG S++E+N H F AGDTSHPQ+K+IY++L
Sbjct: 475 RVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
Query: 571 VLVGKMKELGYVPETDSA--LHDVEEEDKEGHLAVHSEKLAIVFALLN-THESPIRITKN 627
V+ +++ +GY+P+ A + + KE L +HSE+LAI F L+N ++PIRI KN
Sbjct: 535 VIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKN 594
Query: 628 LRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
LRVC DCH KLISK+ EI++RD RFHHFKDG CSC DYW
Sbjct: 595 LRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 179/376 (47%), Gaps = 46/376 (12%)
Query: 45 DIIALKNVHTKLIYLNSHENPS---LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNV 101
D+ LK +H + E P+ L K+++ ++ + A +VFD I + +N
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 102 MIRSYVNN-RWYNDALLVFREMVN-GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
+IR+ ++ +A +++R+M+ G PD +T+P VLKAC+ G Q+H ++K
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVK 179
Query: 160 VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEV 219
+++V NGLI +YG CGCL AR V DEMP R +VSWNSM+ + +D AL++
Sbjct: 180 HGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQL 239
Query: 220 CREMDDLGQKPDAGTMASLMPAVTNTSSDNV----------------------------L 251
REM +PD TM S++ A S ++ +
Sbjct: 240 FREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 252 YVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM--EKSEVEPDAI 301
Y K +F ++K+ L SWN MI + + A++ + +M ++ V P+++
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSV 358
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
T +L AC + GR+ + + R + P L ++D+ AR G + +A +
Sbjct: 359 TFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMS 418
Query: 361 MKFR-DVASWTSLISA 375
M + D W SL+ A
Sbjct: 419 MPMKPDAVIWRSLLDA 434
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 362 bits (930), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/420 (42%), Positives = 267/420 (63%), Gaps = 5/420 (1%)
Query: 254 KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCASVLPACGD 312
K + N +++++WN+MI Y++N A+ M ++++P+ + AS L AC
Sbjct: 118 KKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACAR 177
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
L L + +H + + N +L ++L+D+YA+CG + +++VF +K DV+ W ++
Sbjct: 178 LGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAM 237
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
I+ + G A+ +FSEM+ +SPD I F+ +L+ CSH GLLEEGK YF M+ +
Sbjct: 238 ITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFS 297
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAA 492
I P++EH+ +VDLLGRAGRV EAY++I+ MP+EP+ +W +LLSS R Y N ++G +A
Sbjct: 298 IQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAI 357
Query: 493 DNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF 552
N LS +SG YVLLSNIY+ +W+ +VR LM + IRK G S +E +H F
Sbjct: 358 QN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRF 414
Query: 553 LAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVF 612
AGDTSH ++K IY+ L L+ K K G+V +TD L DV EE+KE +L HSEKLA+ +
Sbjct: 415 KAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAY 474
Query: 613 ALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+L + + IRI KN+R+C DCH K +SK++ R I++RD RFH F+DGLCSC DYW
Sbjct: 475 VILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 17/290 (5%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRPDNYTYPCV 137
GE G A+KV S++NV+ +N+MI YV N Y +AL + M++ +P+ +++
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 138 LKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV 197
L AC+ +L +H M+ ++ N + + L+ +Y KCG + +R V + R DV
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDV 231
Query: 198 VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIF 257
WN+M+ G+A + +A+ V EM+ PD+ T L+ T S +L +
Sbjct: 232 SIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL---TTCSHCGLLEEGKEY 288
Query: 258 INLEKK------SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
L + L + M+ + + G + Y +E +EPD + S+L +
Sbjct: 289 FGLMSRRFSIQPKLEHYGAMVDLLGR---AGRVKEAYELIESMPIEPDVVIWRSLLSSSR 345
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
LG + + + K +LL N +Y+ E AQKV + M
Sbjct: 346 TYKNPELGEIAIQNLSKAKSGDYVLLSN----IYSSTKKWESAQKVRELM 391
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 25 SFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTA 84
SF S + A LG D+ K VH+ +I N L L+ YA CG+ GT+
Sbjct: 167 SFASSLAACARLG-------DLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 85 RKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS 144
R+VF + +V +N MI + + +A+ VF EM PD+ T+ +L CS
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 145 DNLRFGLQLHGAM-LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNS 202
L G + G M + + L ++ + G+ G + EA +++ MP DVV W S
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 203 MVA 205
+++
Sbjct: 340 LLS 342
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/659 (31%), Positives = 349/659 (52%), Gaps = 74/659 (11%)
Query: 1 MKPPLSRNISKLQALV-SSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYL 59
+K P + +S +AL+ S+ +S+++ S I++ + K DQ+ K +H++ I
Sbjct: 7 LKSPFNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQF------KQLHSQSITR 60
Query: 60 NSHENPSLGIKLMRAYAA--CGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALL 117
NP+ KL + + G A K+F +I E +VV +N MI+ + + +
Sbjct: 61 GVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVR 120
Query: 118 VFREMVNGGFRPDNYTYPCVLKACSCSDN-LRFGLQLHGAMLKVRLDWNLFVGNGLISMY 176
++ M+ G PD++T+P +L L G +LH ++K L NL+V N L+ MY
Sbjct: 121 LYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY 180
Query: 177 GKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMA 236
CG + AR V D + DV SWN M++GY + +++++E+ EM+ P + T+
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLL 240
Query: 237 SLMPAVTNTSSDNVL-----YVKD----------------------------IFINLEKK 263
++ A + ++ YV + IF +++ +
Sbjct: 241 LVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR 300
Query: 264 SLVSW-------------------------------NVMITVYMKNSMPGNAIDLYLQME 292
++SW +MI Y++ +++++ +M+
Sbjct: 301 DVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQ 360
Query: 293 KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLE 352
+ + PD T SVL AC L +L +G I Y+++ K++ ++++ N+LIDMY +CGC E
Sbjct: 361 SAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSE 420
Query: 353 DAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACS 412
AQKVF M RD +WT+++ GQG A+ +F +MQ+ I PD I ++ +LSAC+
Sbjct: 421 KAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACN 480
Query: 413 HSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVW 472
HSG++++ + +F +M D+RI P + H+ C+VD+LGRAG V EAY+++++MP+ PN VW
Sbjct: 481 HSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVW 540
Query: 473 GTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRR 532
G LL + R++++ + LAA +L+L P+ Y LL NIYA RWK++ EVR +
Sbjct: 541 GALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDV 600
Query: 533 RIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHD 591
I+KTPG S +E+N H F+AGD SH QS+EIY +L L + Y+P+T L +
Sbjct: 601 AIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFE 659
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/585 (34%), Positives = 321/585 (54%), Gaps = 14/585 (2%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
+V + MI ++N AL +FR+M G P+ T + ACSC + G ++H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
+K+ ++ VGN L+ MY KCG L +AR V D + +DV +WNSM+ GY Q
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK-----KSLVSWN 269
A E+ M D +P+ T +++ + D+F +EK ++ +WN
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEG--EAMDLFQRMEKDGKVQRNTATWN 493
Query: 270 VMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
++I Y++N A++L+ +M+ S P+++T S+LPAC +L + R IH V R+
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRR 553
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
L ++N+L D YA+ G +E ++ +F M+ +D+ +W SLI Y + G ALALF
Sbjct: 554 NLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALF 613
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
++M+ GI+P+ +I+ A G ++EGK F + +DY I P +EH + +V L GR
Sbjct: 614 NQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGR 673
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
A R++EA I++M ++ +W + L+ CR++ ++D+ + AA+NL L PE + ++
Sbjct: 674 ANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIV 733
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
S IYA + E + ++K G S +E+ + +HTF GD QSK + L
Sbjct: 734 SQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD----QSKLCTDVL 789
Query: 570 YVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNT---HESPIRITK 626
Y LV KM L + + +EEE +E +HSEK A+ F L+++ ++ IRI K
Sbjct: 790 YPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILK 849
Query: 627 NLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
NLR+C DCH AK +SK G +I++ DT HHFK+G CSC DYW
Sbjct: 850 NLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 220/418 (52%), Gaps = 11/418 (2%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYV-NNRWYNDALLVFREMVNGGFR 128
KL+ YA CG ARKVFD + ERN+ ++ MI +Y NRW A L FR M+ G
Sbjct: 120 KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKL-FRLMMKDGVL 178
Query: 129 PDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
PD++ +P +L+ C+ ++ G +H ++K+ + L V N ++++Y KCG L A
Sbjct: 179 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 238
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD 248
M RDV++WNS++ Y QN + ++A+E+ +EM+ G P T L+
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 249 NVLYVKDIFINLE----KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCA 304
+ D+ +E + +W MI+ + N M A+D++ +M + V P+A+T
Sbjct: 299 DA--AMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIM 356
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
S + AC L + G +H + ++L+ NSL+DMY++CG LEDA+KVFD +K +
Sbjct: 357 SAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 365 DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYF 424
DV +W S+I+ Y G A LF+ MQ++ + P+ I + ++S +G E F
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 425 KQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSSC 479
++M D ++ + ++ + G+ DEA ++ ++M PN +LL +C
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 174/392 (44%), Gaps = 46/392 (11%)
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G + TY +L++C S ++ G LH A + + ++FV L+SMY KCGC+ +A
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILH-ARFGLFTEPDVFVETKLLSMYAKCGCIADA 134
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN- 244
R V D M R++ +W++M+ Y++ R+ + ++ R M G PD ++ N
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 245 --TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
+ V++ I + + VS N ++ VY K A + +M E D I
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVS-NSILAVYAKCGELDFATKFFRRMR----ERDVIA 249
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
SVL A + + +E++ + P L+ N LI Y + G + A + KM+
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 363 ----FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLE 418
DV +WT++IS G AL +F +M +G+ P+ + ++ +SACS ++
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 419 EG--------KVYF-------KQMTDDYRITPRIEHFACLVDLLG--------------- 448
+G K+ F + D Y ++E + D +
Sbjct: 370 QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYC 429
Query: 449 RAGRVDEAYDVIKQMP---LEPNERVWGTLLS 477
+AG +AY++ +M L PN W T++S
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
Query: 71 LMRAYAACGEPGTARKVFDEIS-----ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
++ Y G+ G A +F + +RN +N++I Y+ N ++AL +FR+M
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
F P++ T +L AC+ + ++HG +L+ LD V N L Y K G + +
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYS 578
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
R + M +D+++WNS++ GY + + AL + +M G P+ GT++S++ A
Sbjct: 579 RTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 207/592 (34%), Positives = 321/592 (54%), Gaps = 44/592 (7%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA D+ K +H ++I L S + L+ Y + A +VF I ++++
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGG-FRPDNYTYPCVLKACSCSDNLRFGLQLHGA 156
++ +I + + +AL +EM++ G F P+ Y + LKACS +G Q+HG
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 157 MLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDA 216
+K L N G L MY +CG L AR V D++ R D SWN ++AG A N D+A
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 217 LEVCREMDDLGQKPDAGTMASLMPAVTN-----------------------TSSDNVL-- 251
+ V +M G PDA ++ SL+ A T T +++L
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 252 --YVKDIF--INL-----EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
+ D++ NL VSWN ++T +++ P + L+ M SE EPD IT
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
++L C ++S+L LG ++H Y + L P ++N LIDMYA+CG L A+++FD M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD 535
Query: 363 FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKV 422
RDV SW++LI Y +G G AL LF EM+++GI P+H+ FV +L+ACSH GL+EEG
Sbjct: 536 NRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLK 595
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
+ M ++ I+P EH +C+VDLL RAGR++EA I +M LEP+ VW TLLS+C+
Sbjct: 596 LYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQ 655
Query: 483 SNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN 542
N+ + AA+N+L++ P S +VLL +++A +G W+ +RS MK+ ++K PG S
Sbjct: 656 GNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSW 715
Query: 543 VELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKM---------KELGYVPET 585
+E+ ++H F A D HP+ +IY L+ + +M K L ++ ET
Sbjct: 716 IEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLDECNPQHKKRLQFIHET 767
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 210/465 (45%), Gaps = 43/465 (9%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H ++ N + L ++ Y CG AR+VFD + ERN+V Y +I Y N
Sbjct: 87 RKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQN 146
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+A+ ++ +M+ PD + + ++KAC+ S ++ G QLH ++K+ +L
Sbjct: 147 GQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ 206
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ- 228
N LI+MY + + +A V +P +D++SW+S++AG++Q +AL +EM G
Sbjct: 207 NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 229 ------------------KPDAGTMASLMPAVTNTSSDNV-------LYVKDIFIN---- 259
+PD G+ + + + + + +Y + F+N
Sbjct: 267 HPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARR 326
Query: 260 ----LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+E+ SWNV+I N A+ ++ QM S PDAI+ S+L A A
Sbjct: 327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMA 386
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLIS 374
L G +IH Y+ + +L + NSL+ MY C L +F+ + D SW ++++
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTDDYRI 433
A Q L LF M S PDHI +L C L+ G +V+ +
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERV--WGTLL 476
I++ L+D+ + G + +A + M N V W TL+
Sbjct: 507 EQFIKN--GLIDMYAKCGSLGQARRIFDSM---DNRDVVSWSTLI 546
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 171/356 (48%), Gaps = 35/356 (9%)
Query: 100 NVMIRSYVNNRWYNDALLVFR-EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
N I S + +Y +AL F N F+ TY ++ ACS S +L G ++H +L
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
++ + N ++SMYGKCG L +AR V D MP R++VS+ S++ GY+QN + +A+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 219 VCREMDDLGQKPDAGTMASLMPAVTNTS----------------------SDNVL---YV 253
+ +M PD S++ A ++S + N L YV
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 254 K--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV-EPDAITCA 304
+ +F + K L+SW+ +I + + A+ +M V P+
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
S L AC L G +IH + +L N + SL DMYARCG L A++VFD+++
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERP 334
Query: 365 DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
D ASW +I+ G A+++FS+M++SG PD I+ ++L A + L +G
Sbjct: 335 DTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG 390
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 39/267 (14%)
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
T S++ AC +L GR+IH+++ + + +L N ++ MY +CG L DA++VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
R++ S+TS+I+ Y GQG A+ L+ +M + PD AF +I+ AC+ S + GK
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 422 -------------------------VYFKQMTDDYRITPRIE-----HFACLVDLLGRAG 451
V F QM+D R+ I ++ ++ + G
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 452 RVDEAYDVIKQM----PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYV 507
EA +K+M PNE ++G+ L +C D G + + L + E +G +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYG--SQIHGLCIKSELAGNAI 306
Query: 508 L---LSNIYAKAGRWKEVTEVRSLMKR 531
L ++YA+ G V ++R
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIER 333
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 195/556 (35%), Positives = 317/556 (57%), Gaps = 35/556 (6%)
Query: 150 GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
GLQLHG ++K L V N LI+ Y K ++R ++ P++ +W+S+++ +AQ
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAV------------------TNTSSD--- 248
N +LE ++M +PD + S + T +D
Sbjct: 94 NELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFV 153
Query: 249 ------------NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
++Y + +F + ++++V+W+ M+ Y + A+ L+ + +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
+ + +SV+ C + + L LGR+IH + + + +SL+ +Y++CG E A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
VF+++ +++ W +++ AY + LF M+ SG+ P+ I F+ +L+ACSH+GL
Sbjct: 274 VFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 417 LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
++EG+ YF QM + RI P +H+A LVD+LGRAGR+ EA +VI MP++P E VWG LL
Sbjct: 334 VDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 477 SSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRK 536
+SC V+ N ++ AAD + +L P SG ++ LSN YA GR+++ + R L++ R +K
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 537 TPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEED 596
G+S VE ++VHTF AG+ H +SKEIYE+L L +M++ GY+ +T L +V+ ++
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDE 512
Query: 597 KEGHLAVHSEKLAIVFALLN-THESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTN 655
K + HSE+LAI F L+ + PIR+ KNLRVCGDCH A K +S R I++RD N
Sbjct: 513 KNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNN 572
Query: 656 RFHHFKDGLCSCGDYW 671
RFH F+DG CSC DYW
Sbjct: 573 RFHRFEDGKCSCNDYW 588
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 164/345 (47%), Gaps = 34/345 (9%)
Query: 65 PSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN 124
P + L+ Y+ P +R+ F++ +++ ++ +I + N +L ++M+
Sbjct: 50 PLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA 109
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLE 184
G RPD++ P K+C+ G +H +K D ++FVG+ L+ MY KCG ++
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
AR + DEMP+R+VV+W+ M+ GYAQ ++AL + +E + + +S++ N
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 245 TSSDNV-------------------------LYVK--------DIFINLEKKSLVSWNVM 271
++ + LY K +F + K+L WN M
Sbjct: 230 STLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAM 289
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
+ Y ++S I+L+ +M+ S ++P+ IT +VL AC + GR + ++ ++
Sbjct: 290 LKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRI 349
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WTSLISA 375
P SL+DM R G L++A +V M S W +L+++
Sbjct: 350 EPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTS 394
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 355 bits (912), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 311/562 (55%), Gaps = 35/562 (6%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ +H ++ + H +P + L+ Y+ CG G A VF + ++ + +N M+ +Y N
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ AL +F M PD++T V+ CS +G +H + K + +
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM--DDLG 227
+ L+++Y KCGC +A V M +D+V+W S+++G +N +F +AL+V +M DD
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 228 QKPDAGTMASLMPA-------------------------VTNTSSDNVLYVK-------- 254
KPD+ M S+ A V SS LY K
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
+F ++ +++V+WN MI+ Y +N++P +IDL+ M + PD+++ SVL A +
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
+LL G+ +H Y R + + L+N+LIDMY +CG + A+ +F KM+ + + +W +I
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
YG G AL+LF EM+ +G SPD + F++++SAC+HSG +EEGK F+ M DY I
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
P +EH+A +VDLLGRAG ++EAY IK MP+E + +W LLS+ R + N+++G+L+A+
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 495 LLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLA 554
LL++ PE+ YV L N+Y +AG E ++ LMK + + K PG S +E++ + + F +
Sbjct: 772 LLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFS 831
Query: 555 GDTSHPQSKEIYEELYVLVGKM 576
G +S P EI+ L L M
Sbjct: 832 GGSSSPMKAEIFNVLNRLKSNM 853
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 226/514 (43%), Gaps = 52/514 (10%)
Query: 12 LQAL-VSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIK 70
LQAL + S + F + V L KA ++ K +H ++ L +P +
Sbjct: 41 LQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATS 100
Query: 71 LMRAYAACGEPGTARKVFDE-------ISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
L+ Y CG A +VFD +S R+V +N MI Y R + + + FR M+
Sbjct: 101 LVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRML 160
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRF--GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGC 181
G RPD ++ V+ N R G Q+HG ML+ LD + F+ LI MY K G
Sbjct: 161 VFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGL 220
Query: 182 LLEARYVLDEMP-RRDVVSWNSMVAGY---------------AQN-------MRFDDALE 218
++A V E+ + +VV WN M+ G+ A+N F AL
Sbjct: 221 SIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALG 280
Query: 219 VCREMDD-------------LGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSL 265
C + ++ +G D SL+ + V + +F + K L
Sbjct: 281 ACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGM--VGEAETVFSCVVDKRL 338
Query: 266 VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEY 325
WN M+ Y +N +A+DL+ M + V PD+ T ++V+ C L G+ +H
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 326 VERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNA 385
+ ++ ++ +E++L+ +Y++CGC DA VF M+ +D+ +W SLIS G+ A
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 386 LALFSEMQ--NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACL 443
L +F +M+ + + PD ++ +AC+ L G M + + + L
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSL 517
Query: 444 VDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+DL + G + A V M E N W +++S
Sbjct: 518 IDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMIS 550
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 200/423 (47%), Gaps = 48/423 (11%)
Query: 100 NVMIRSYVNNRWYNDALLVFREMVNGG-FRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
N IR+ + Y AL ++ + F +T+P +LKACS NL +G +HG+++
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR-------RDVVSWNSMVAGYAQNM 211
+ ++ F+ L++MY KCG L A V D + RDV WNSM+ GY +
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFR 147
Query: 212 RFDDALEVCREMDDLGQKPDAGTMASLMPAV--------------------TNTSSDNVL 251
RF + + R M G +PDA +++ ++ + + +D+ L
Sbjct: 148 RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 252 -------YVK--------DIFINLEKKS-LVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
Y K +F+ +E KS +V WNVMI + + + +++DLY+ + +
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNS 267
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
V+ + + L AC GR+IH V + L + + SL+ MY++CG + +A+
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAE 327
Query: 356 KVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
VF + + + W ++++AY G +AL LF M+ + PD ++S CS G
Sbjct: 328 TVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLG 387
Query: 416 LLEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGT 474
L GK V+ + + T IE + L+ L + G +AY V K M E + WG+
Sbjct: 388 LYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EKDMVAWGS 444
Query: 475 LLS 477
L+S
Sbjct: 445 LIS 447
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 214/450 (47%), Gaps = 37/450 (8%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER-NVVFYNVMIRSYVN 108
K +H ++ + + L L+ Y G A +VF EI ++ NVV +NVMI +
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
+ +L ++ N + + ++ L ACS S+N FG Q+H ++K+ L + +V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
L+SMY KCG + EA V + + + WN+MVA YA+N AL++ M
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 229 KPDAGTMASLMPA---------------------VTNTSSDN----VLYVKD-------- 255
PD+ T+++++ + +TS+ LY K
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE--VEPDAITCASVLPACGDL 313
+F ++E+K +V+W +I+ KN A+ ++ M+ + ++PD+ SV AC L
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
AL G ++H + + L N+ + +SLID+Y++CG E A KVF M ++ +W S+I
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
S Y ++ LF+ M + GI PD ++ ++L A S + L +GK T I
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS-LHGYTLRLGI 608
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
L+D+ + G A ++ K+M
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 6 SRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQ--YPDIIAL-------------- 49
+ N+ +++S + ++ P ++++L L Q +PD +++
Sbjct: 539 TENMVAWNSMISCYSRN----NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594
Query: 50 --KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYV 107
K++H + L + L L+ Y CG A +F ++ ++++ +N+MI Y
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNL 166
++ AL +F EM G PD+ T+ ++ AC+ S + G + M + ++ N+
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMP 193
++ + G+ G L EA + MP
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMP 741
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 352 bits (902), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 211/607 (34%), Positives = 313/607 (51%), Gaps = 71/607 (11%)
Query: 71 LMRAYAACGEPGTARKVFDEI-SERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
L+ YA C A +F+ + E+N V + M+ Y N + A+ FR++ G +
Sbjct: 166 LLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS 225
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
+ YT+P VL AC+ R G+Q+H ++K N++V + LI MY KC + AR +L
Sbjct: 226 NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALL 285
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP--AVTNT-- 245
+ M DVVSWNSM+ G + +AL + M + K D T+ S++ A++ T
Sbjct: 286 EGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEM 345
Query: 246 ---SSDNVLYVK---------------------------DIFINLEKKSLVSWNVMITVY 275
SS + L VK +F + +K ++SW ++T
Sbjct: 346 KIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGN 405
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
N A+ L+ M + PD I ASVL A +L+ L G+++H + +L
Sbjct: 406 THNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSL 465
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+ NSL+ MY +CG LEDA +F+ M+ RD+ +WT LI Y
Sbjct: 466 SVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGY------------------- 506
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
+ +GLLE+ + YF M Y ITP EH+AC++DL GR+G +
Sbjct: 507 ----------------AKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVK 550
Query: 456 AYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAK 515
++ QM +EP+ VW +L++ R + N++ G AA L++L P + YV LSN+Y+
Sbjct: 551 VEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSA 610
Query: 516 AGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGK 575
AGR E VR LMK R I K PG S VE +VH+F++ D HP+ EIY ++ ++
Sbjct: 611 AGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLL 670
Query: 576 MKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDC 634
+KE GY + ALHD+++E KE LA HSEKLA+ F LL +PIRI KNLRVCGDC
Sbjct: 671 IKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNLRVCGDC 730
Query: 635 HIAAKLI 641
H A KL+
Sbjct: 731 HSAMKLL 737
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 196/410 (47%), Gaps = 68/410 (16%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR------------------ 120
G AR++FD++ ER+ +N MI +Y N+R +DA +FR
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 121 -------------EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
EM + G +P+ YT VL+ C+ L G Q+HG +K D ++
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN 161
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
V NGL++MY +C + EA Y+ + M ++ V+W SM+ GY+QN A+E R++
Sbjct: 162 VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRE 221
Query: 227 GQKPDAGTMASLMPAVTNTSSDNV----------------LYVKDIFIN----------- 259
G + + T S++ A + S+ V +YV+ I+
Sbjct: 222 GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESA 281
Query: 260 ------LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+E +VSWN MI ++ + G A+ ++ +M + +++ D T S+L C L
Sbjct: 282 RALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILN-CFAL 340
Query: 314 S--ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
S + + H + + L+ N+L+DMYA+ G ++ A KVF+ M +DV SWT+
Sbjct: 341 SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTA 400
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
L++ G AL LF M+ GI+PD I ++LSA + LLE G+
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQ 450
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 155/333 (46%), Gaps = 47/333 (14%)
Query: 149 FGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYA 208
FG +H + +L NL +G+ K G + EAR + D+MP RD +WN+M+ Y+
Sbjct: 16 FGSCIHSYADRTKLHSNLLLGD-----LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSW 268
+ R DA + +F + K+ +SW
Sbjct: 71 NSRRLSDA-------------------------------------EKLFRSNPVKNTISW 93
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N +I+ Y K+ A +L+ +M+ ++P+ T SVL C L LL G +IH + +
Sbjct: 94 NALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK 153
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF-RDVASWTSLISAYGMTGQGCNALA 387
++ + N L+ MYA+C + +A+ +F+ M+ ++ +WTS+++ Y G A+
Sbjct: 154 TGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 388 LFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFACLVDL 446
F +++ G + F ++L+AC+ G +V+ + ++ ++ + L+D+
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALIDM 271
Query: 447 LGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
+ ++ A +++ M ++ + W +++ C
Sbjct: 272 YAKCREMESARALLEGMEVD-DVVSWNSMIVGC 303
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 178/420 (42%), Gaps = 52/420 (12%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
VH ++ N + L+ YA C E +AR + + + +VV +N MI V
Sbjct: 249 VHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGL 308
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCS-DNLRFGLQLHGAMLKVRLDWNLFVGN 170
+AL +F M + D++T P +L + S ++ H ++K V N
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
L+ MY K G + A V + M +DV+SW ++V G N +D+AL++ M G P
Sbjct: 369 ALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 231 DAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ 290
D AS++ A S++ L LE V N Y+K+ P + L
Sbjct: 429 DKIVTASVLSA----SAELTL--------LEFGQQVHGN-----YIKSGFPSS-----LS 466
Query: 291 MEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGC 350
+ S V ++ CG L I +E + +L+ LI YA+ G
Sbjct: 467 VNNSLV--------TMYTKCGSLED---ANVIFNSMEIR----DLITWTCLIVGYAKNGL 511
Query: 351 LEDAQKVFDKMK-----FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
LEDAQ+ FD M+ + +I +G +G L +M+ + PD +
Sbjct: 512 LEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME---VEPDATVWK 568
Query: 406 AILSACSHSGLLEEGKVYFKQMT--DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
AIL+A G +E G+ K + + P ++ L ++ AGR DEA +V + M
Sbjct: 569 AILAASRKHGNIENGERAAKTLMELEPNNAVPYVQ----LSNMYSAAGRQDEAANVRRLM 624
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 209/611 (34%), Positives = 338/611 (55%), Gaps = 47/611 (7%)
Query: 14 ALVSSFQKSLASFQSPVIAVEL--LGKALDQYPDIIAL------------KNVHTKLIYL 59
+++SS+ S S ++ + E+ G A + Y + AL K +H ++
Sbjct: 254 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 313
Query: 60 NSHENP-SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLV 118
++H + + L+ Y CG+ A ++ +++ +VV +N +I+ YV N Y +AL
Sbjct: 314 STHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEF 373
Query: 119 FREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGK 178
F +M+ G + D + ++ A NL G++LH ++K D NL VGN LI MY K
Sbjct: 374 FSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSK 433
Query: 179 CGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASL 238
C M +D++SW +++AGYAQN +ALE+ R++ + D + S+
Sbjct: 434 CNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSI 493
Query: 239 MPA--------------------------VTNTSSD------NVLYVKDIFINLEKKSLV 266
+ A + N D N+ Y +F +++ K +V
Sbjct: 494 LRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVV 553
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
SW MI+ N A++L+ +M ++ + D++ +L A LSAL GR IH Y+
Sbjct: 554 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNAL 386
RK + +++DMYA CG L+ A+ VFD+++ + + +TS+I+AYGM G G A+
Sbjct: 614 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 673
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDL 446
LF +M++ +SPDHI+F+A+L ACSH+GLL+EG+ + K M +Y + P EH+ CLVD+
Sbjct: 674 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 733
Query: 447 LGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYY 506
LGRA V EA++ +K M EP VW LL++CR +S +IG +AA LL+L P+ G
Sbjct: 734 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNL 793
Query: 507 VLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIY 566
VL+SN++A+ GRW +V +VR+ MK + K PG S +E++ +VH F A D SHP+SKEIY
Sbjct: 794 VLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Query: 567 EELYVLVGKMK 577
E+L + K++
Sbjct: 854 EKLSEVTRKLE 864
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 207/435 (47%), Gaps = 37/435 (8%)
Query: 15 LVSSFQK-SLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLI-YLNSHENPSLGIKLM 72
L +FQ+ ++ SPV A + + + + + +H+++ S E L KL+
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLV 123
Query: 73 RAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNY 132
Y CG A KVFDE+ +R +N MI +YV+N AL ++ M G
Sbjct: 124 FMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLS 183
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
++P +LKAC+ ++R G +LH ++K+ F+ N L+SMY K L AR + D
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 193 PRR-DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA---------- 241
+ D V WNS+++ Y+ + + + LE+ REM G P++ T+ S + A
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 242 -------VTNTSSDNVLYVKDIFI-----------------NLEKKSLVSWNVMITVYMK 277
+ +++ + LYV + I + +V+WN +I Y++
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
N M A++ + M + + D ++ S++ A G LS LL G +H YV + NL +
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
N+LIDMY++C + F +M +D+ SWT++I+ Y AL LF ++ +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 398 SPDHIAFVAILSACS 412
D + +IL A S
Sbjct: 484 EIDEMILGSILRASS 498
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 253 VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+ +F + ++ +WN MI Y+ N P +A+ LY M V + ++L AC
Sbjct: 135 AEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAK 194
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTS 371
L + G +H + + + N+L+ MYA+ L A+++FD + + D W S
Sbjct: 195 LRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNS 254
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
++S+Y +G+ L LF EM +G +P+ V+ L+AC + GK +
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 432 RITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+ + L+ + R G++ +A +++QM
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQM 346
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 41/283 (14%)
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL---LLE 338
G + + +++ SE A VL CG A+ GR++H + K P+ L
Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRI--FKTFPSFELDFLA 119
Query: 339 NSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGIS 398
L+ MY +CG L+DA+KVFD+M R +W ++I AY G+ +ALAL+ M+ G+
Sbjct: 120 GKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVP 179
Query: 399 PDHIAFVAILSACS-----------HSGLLEEG------------KVYFK--------QM 427
+F A+L AC+ HS L++ G +Y K ++
Sbjct: 180 LGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSN 484
D ++ + ++ +G+ E ++ ++M + PN + L++C +S
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 485 MDIGLLAADNLLQLSPEQSGYYVL--LSNIYAKAGRWKEVTEV 525
+G ++L+ S S YV L +Y + G+ + +
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERI 342
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/562 (34%), Positives = 304/562 (54%), Gaps = 37/562 (6%)
Query: 44 PDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
P + K +H ++ + SL L+ +Y CG A K+F+ + +N++ + ++
Sbjct: 263 PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 104 RSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD 163
Y N + +A+ +F M G +PD Y +L +C+ L FG Q+H +K L
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 164 WNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ---NMRFDDALEVC 220
+ +V N LI MY KC CL +AR V D DVV +N+M+ GY++ +AL +
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 221 REMDDLGQKPDAGTMASLMPAVTNTSS------------------------------DNV 250
R+M +P T SL+ A + +S N
Sbjct: 443 RDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC 502
Query: 251 LYVKD---IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVL 307
+KD +F ++ K LV WN M Y++ S A++L+L+++ S PD T A+++
Sbjct: 503 YCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMV 562
Query: 308 PACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
A G+L+++ LG+ H + ++ L N + N+L+DMYA+CG EDA K FD RDV
Sbjct: 563 TAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVV 622
Query: 368 SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
W S+IS+Y G+G AL + +M + GI P++I FV +LSACSH+GL+E+G F+ M
Sbjct: 623 CWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM 682
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDI 487
+ I P EH+ C+V LLGRAGR+++A ++I++MP +P VW +LLS C N+++
Sbjct: 683 L-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVEL 741
Query: 488 GLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNS 547
AA+ + P+ SG + +LSNIYA G W E +VR MK + K PG S + +N
Sbjct: 742 AEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINK 801
Query: 548 QVHTFLAGDTSHPQSKEIYEEL 569
+VH FL+ D SH ++ +IYE L
Sbjct: 802 EVHIFLSKDKSHCKANQIYEVL 823
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 257/548 (46%), Gaps = 53/548 (9%)
Query: 45 DIIALKNV-HTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
D++ +NV H ++I + L L+ Y+ G ARKVF+++ ERN+V ++ M+
Sbjct: 58 DLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMV 117
Query: 104 RSYVNNRWYNDALLVFREMVNG-GFRPDNYTYPCVLKACSCSDNLR--FGLQLHGAMLKV 160
+ ++ Y ++L+VF E P+ Y ++ACS D QL ++K
Sbjct: 118 SACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKS 177
Query: 161 RLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVC 220
D +++VG LI Y K G + AR V D +P + V+W +M++G + R +L++
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 221 REMDDLGQKPDAGTMASLMPAVT----------------------NTSSDNVL---YVK- 254
++ + PD +++++ A + + S NVL YVK
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 255 -------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVL 307
+F + K+++SW +++ Y +N++ A++L+ M K ++PD C+S+L
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 308 PACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
+C L AL G ++H Y + L + + NSLIDMYA+C CL DA+KVFD DV
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 368 SWTSLISAYGMTGQGC---NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYF 424
+ ++I Y G AL +F +M+ I P + FV++L A + L K
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 425 KQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSN 484
M Y + I + L+D+ + ++ V +M ++ + +W ++ + S
Sbjct: 478 GLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAGYVQQSE 535
Query: 485 MDIGLLAADNL---LQLSPEQSGYYVLLSNIYAKAGRWKEV---TEVRSLMKRRRIRKTP 538
+ L NL LQLS E+ + +N+ AG V E + +R + P
Sbjct: 536 NEEAL----NLFLELQLSRERPDEFT-FANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 590
Query: 539 GISNVELN 546
I+N L+
Sbjct: 591 YITNALLD 598
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 152/312 (48%), Gaps = 36/312 (11%)
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD 196
+L+ + D L + +HG ++ L+ + ++ N LI++Y + G ++ AR V ++MP R+
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 197 VVSWNSMVAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMPAVTNTSS-------- 247
+VSW++MV+ + ++++L V E P+ ++S + A +
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ 169
Query: 248 ---------------------------DNVLYVKDIFINLEKKSLVSWNVMITVYMKNSM 280
N+ Y + +F L +KS V+W MI+ +K
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
++ L+ Q+ + V PD ++VL AC L L G++IH ++ R L + L N
Sbjct: 230 SYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNV 289
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
LID Y +CG + A K+F+ M +++ SWT+L+S Y A+ LF+ M G+ PD
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 401 HIAFVAILSACS 412
A +IL++C+
Sbjct: 350 MYACSSILTSCA 361
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 199/608 (32%), Positives = 323/608 (53%), Gaps = 71/608 (11%)
Query: 40 LDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEP---GTARKVFDEISERNV 96
L++ ++ LK + ++I +P +L+ A+ A E + K+ I N+
Sbjct: 60 LEKCKLLLHLKQIQAQMIINGLILDPFASSRLI-AFCALSESRYLDYSVKILKGIENPNI 118
Query: 97 VFYNVMIRSYVNNRWYNDALLVFREMVNGGF---RPDNYTYPCVLKACSCSDNLRFGLQL 153
+NV IR + + ++ L++++M+ G RPD++TYP + K C+ G +
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRF 213
G +LK+RL+ V N I M+ CG + AR V DE P RD+VSWN ++ GY +
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 214 DDALEVCREMDDLGQKPDAGTMASLMPAVT-----NTSSDNVLYVKD------------- 255
+ A+ V + M+ G KPD TM L+ + + N + YVK+
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 256 ---------------IFINLEKKSLVSWNVMITVYMK----------------------N 278
IF NLEK+++VSW MI+ Y + N
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWN 358
Query: 279 SMPG---------NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
+M G +A+ L+ +M+ S +PD IT L AC L AL +G IH Y+E+
Sbjct: 359 AMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKY 418
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
L N+ L SL+DMYA+CG + +A VF ++ R+ ++T++I + G A++ F
Sbjct: 419 SLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYF 478
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
+EM ++GI+PD I F+ +LSAC H G+++ G+ YF QM + + P+++H++ +VDLLGR
Sbjct: 479 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGR 538
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
AG ++EA +++ MP+E + VWG LL CR++ N+++G AA LL+L P SG YVLL
Sbjct: 539 AGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLL 598
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
+Y +A W++ R +M R + K PG S++E+N V F+ D S P+S++IY+ L
Sbjct: 599 DGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Query: 570 YVLVGKMK 577
+ L M+
Sbjct: 659 HCLGRHMR 666
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 345 bits (885), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 191/567 (33%), Positives = 305/567 (53%), Gaps = 44/567 (7%)
Query: 9 ISKLQALV---SSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENP 65
IS L A+ S+F++ S + + L L +I + ++H K+I ++
Sbjct: 2 ISSLAAITGGPSTFRRDPDSNTLRLSRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDA 61
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
+ +L+R + A VF +S NV Y MI +V++ D + ++ M++
Sbjct: 62 FVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHN 121
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
PDNY VLKAC +L+ ++H +LK+ + VG ++ +YGK G L+ A
Sbjct: 122 SVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNA 177
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
+ + DEMP RD V+ M+ Y++ +ALE
Sbjct: 178 KKMFDEMPDRDHVAATVMINCYSECGFIKEALE--------------------------- 210
Query: 246 SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
+F +++ K V W MI ++N A++L+ +M+ V + T
Sbjct: 211 ----------LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
VL AC DL AL LGR +H +VE +++ + + N+LI+MY+RCG + +A++VF M+ +D
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFK 425
V S+ ++IS M G A+ F +M N G P+ + VA+L+ACSH GLL+ G F
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFN 380
Query: 426 QMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM 485
M + + P+IEH+ C+VDLLGR GR++EAY I+ +P+EP+ + GTLLS+C+++ NM
Sbjct: 381 SMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNM 440
Query: 486 DIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
++G A L + SG YVLLSN+YA +G+WKE TE+R M+ I K PG S +E+
Sbjct: 441 ELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEV 500
Query: 546 NSQVHTFLAGDTSHPQSKEIYEELYVL 572
++Q+H FL GD +HP + IY+ L L
Sbjct: 501 DNQIHEFLVGDIAHPHKEAIYQRLQEL 527
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 293/528 (55%), Gaps = 38/528 (7%)
Query: 86 KVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSD 145
+VFDE+ ER+V +N +I + + AL +F M + GF P++ + + ACS
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
L G ++H +K + + +V + L+ MYGKC CL AR V +MPR+ +V+WNSM+
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 206 GYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVK----------- 254
GY +E+ M G +P T+ S++ A + S N+L+ K
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR--SRNLLHGKFIHGYVIRSVV 340
Query: 255 --DIFIN----------------------LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ 290
DI++N +K SWNVMI+ Y+ A+++Y Q
Sbjct: 341 NADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ 400
Query: 291 MEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGC 350
M V+PD +T SVLPAC L+AL G++IH + +L + LL ++L+DMY++CG
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 351 LEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA 410
++A ++F+ + +DV SWT +ISAYG GQ AL F EMQ G+ PD + +A+LSA
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Query: 411 CSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP-LEPNE 469
C H+GL++EG +F QM Y I P IEH++C++D+LGRAGR+ EAY++I+Q P N
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNA 580
Query: 470 RVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLM 529
+ TL S+C ++ +G A L++ P+ + Y++L N+YA W VR M
Sbjct: 581 ELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 640
Query: 530 KRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMK 577
K +RK PG S +E++ +V F A D SH +++ +YE L +L G M+
Sbjct: 641 KEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHME 688
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 230/482 (47%), Gaps = 39/482 (8%)
Query: 33 VELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEIS 92
+ LL + + + +K VH +++ L + L L+ Y C + +AR VF+
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 93 ERNVVF-YNVMIRSYVNNRWYNDALLVFREMVNGGF-RPDNYTYPCVLKACSCSDNLRFG 150
R+ V+ +N ++ Y N ++D L VF+ ++N PD++T+P V+KA G
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG 126
Query: 151 LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
+H ++K ++ V + L+ MY K + V DEMP RDV SWN++++ + Q+
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQS 186
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT------------------------- 245
+ ALE+ M+ G +P++ ++ + A +
Sbjct: 187 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 246
Query: 246 --------SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
D + +++F + +KSLV+WN MI Y+ + +++ +M
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
P T S+L AC LL G+ IH YV R + ++ + SLID+Y +CG A+ V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 358 FDKMKFRDVA-SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
F K + +DVA SW +IS+Y G A+ ++ +M + G+ PD + F ++L ACS
Sbjct: 367 FSKTQ-KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 417 LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
LE+GK +++ T + + L+D+ + G EA+ + +P + + W ++
Sbjct: 426 LEKGKQIHLSISESRLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMI 483
Query: 477 SS 478
S+
Sbjct: 484 SA 485
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 34/345 (9%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H K + + + L+ Y C AR+VF ++ +++V +N MI+ YV
Sbjct: 228 KEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAK 287
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ + M+ G RP T +L ACS S NL G +HG +++ ++ +++V
Sbjct: 288 GDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
LI +Y KCG A V + + SWN M++ Y + A+EV +M +G K
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 230 PDAGTMASLMPAVTNTS------------------SDNVL-------YVK--------DI 256
PD T S++PA + + +D +L Y K I
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSAL 316
F ++ KK +VSW VMI+ Y + P A+ + +M+K ++PD +T +VL ACG +
Sbjct: 468 FNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLI 527
Query: 317 LLGRRIHEYVERK-KLRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
G + + K + P + + +ID+ R G L +A ++ +
Sbjct: 528 DEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 338 bits (867), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 192/621 (30%), Positives = 344/621 (55%), Gaps = 40/621 (6%)
Query: 90 EISERNVVFYNVMIRSYVNNRWYNDALLVFREM-VNGGFRPDNYTYPCVLKACSCSDNLR 148
+IS+ V + + + + NR + +A +F + + F+ TY +++AC ++R
Sbjct: 82 QISKSGVTICSQIEKLVLCNR-FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIR 140
Query: 149 FGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYA 208
+++G M+ + ++ N ++ M+ KCG +++AR + DE+P R++ S+ S+++G+
Sbjct: 141 CVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFV 200
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-----------------DNV- 250
+ +A E+ + M + + T A ++ A S DN
Sbjct: 201 NFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTF 260
Query: 251 -------LYVK--DI------FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
+Y K DI F + +K+ V+WN +I Y + A+ L M S
Sbjct: 261 VSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSG 320
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
V D T + ++ L+ L L ++ H + R ++ +L+D Y++ G ++ A+
Sbjct: 321 VSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTAR 380
Query: 356 KVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
VFDK+ +++ SW +L+ Y G+G +A+ LF +M + ++P+H+ F+A+LSAC++SG
Sbjct: 381 YVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSG 440
Query: 416 LLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTL 475
L E+G F M++ + I PR H+AC+++LLGR G +DEA I++ PL+ +W L
Sbjct: 441 LSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAAL 500
Query: 476 LSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIR 535
L++CR+ N+++G + A+ L + PE+ G YV++ N+Y G+ E V ++ + +
Sbjct: 501 LNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLS 560
Query: 536 KTPGISNVELNSQVHTFLAGDT----SHPQSKEIYEELYVLVGKMKELGYVPETDSALHD 591
P + VE+ Q H+FL+GD + ++IY+++ L+ ++ E GY E L D
Sbjct: 561 MMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPD 620
Query: 592 VEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKLISKIVGREIV 650
V+E+++E HSEKLAI + L+NT E +P++IT+N R+C +CH + IS + GRE+V
Sbjct: 621 VDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMV 680
Query: 651 IRDTNRFHHFKDGLCSCGDYW 671
+RD +RFHHFK+G CSCG YW
Sbjct: 681 VRDASRFHHFKEGKCSCGGYW 701
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 35/389 (8%)
Query: 25 SFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTA 84
SF+ V + L +A + I +K V+ ++ + +++ + CG A
Sbjct: 118 SFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDA 177
Query: 85 RKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS 144
R++FDEI ERN+ Y +I +VN Y +A +F+ M + +T+ +L+A +
Sbjct: 178 RRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGL 237
Query: 145 DNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMV 204
++ G QLH LK+ + N FV GLI MY KCG + +AR + MP + V+WN+++
Sbjct: 238 GSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVI 297
Query: 205 AGYAQNMRFDDALEVCREMDDLGQKPDAGTM--------------------ASLM----- 239
AGYA + ++AL + +M D G D T+ ASL+
Sbjct: 298 AGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFE 357
Query: 240 -PAVTNTS-------SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM 291
V NT+ V + +F L +K+++SWN ++ Y + +A+ L+ +M
Sbjct: 358 SEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Query: 292 EKSEVEPDAITCASVLPACGDLSALLLGRRIH-EYVERKKLRPNLLLENSLIDMYARCGC 350
+ V P+ +T +VL AC G I E ++P + +I++ R G
Sbjct: 418 IAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGL 477
Query: 351 LEDAQKVFDKMKFR-DVASWTSLISAYGM 378
L++A + + V W +L++A M
Sbjct: 478 LDEAIAFIRRAPLKTTVNMWAALLNACRM 506
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 153/341 (44%), Gaps = 32/341 (9%)
Query: 7 RNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPD------------------IIA 48
RN+ +++S F +F + V A EL ++ D I
Sbjct: 187 RNLYSYYSIISGF----VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV 242
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
K +H + L +N + L+ Y+ CG+ AR F+ + E+ V +N +I Y
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
+ + +AL + +M + G D +T +++ + L Q H ++++ + +
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
L+ Y K G + ARYV D++PR++++SWN+++ GYA + R DA+++ +M
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 229 KPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE-----KKSLVSWNVMITVYMKNSMPGN 283
P+ T +++ A + + +IF+++ K + + MI + ++ +
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGW--EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE 324
AI + ++ ++ A++L AC L LGR + E
Sbjct: 481 AIAF---IRRAPLKTTVNMWAALLNACRMQENLELGRVVAE 518
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/511 (35%), Positives = 280/511 (54%), Gaps = 4/511 (0%)
Query: 163 DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCRE 222
DWN + S L R +L + R D+ ++N + + LE+
Sbjct: 73 DWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGS 132
Query: 223 MDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPG 282
+ G DA SL+ + S V +F + + LVSWNVMI + +
Sbjct: 133 VIRSGFLDDAIVATSLVRCYSANGS--VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHN 190
Query: 283 NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLI 342
A+ +Y +M V D+ T ++L +C +SAL +G +H + + + N+LI
Sbjct: 191 QALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALI 250
Query: 343 DMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHI 402
DMYA+CG LE+A VF+ M+ RDV +W S+I YG+ G G A++ F +M SG+ P+ I
Sbjct: 251 DMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAI 310
Query: 403 AFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
F+ +L CSH GL++EG +F+ M+ + +TP ++H+ C+VDL GRAG+++ + ++I
Sbjct: 311 TFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYA 370
Query: 463 MPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEV 522
+ +W TLL SC+++ N+++G +A L+QL +G YVL+++IY+ A +
Sbjct: 371 SSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAF 430
Query: 523 TEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYV 582
+R L++ ++ PG S +E+ QVH F+ D HP+S IY EL ++ + GY
Sbjct: 431 ASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYK 490
Query: 583 PETDSALHDVEEEDKEGHL-AVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDCHIAAKL 640
PE + + G HSEKLAI + L+ T + +RITKNLRVC DCH K
Sbjct: 491 PEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKY 550
Query: 641 ISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+SK REI++RD RFHHF DG+CSC DYW
Sbjct: 551 VSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 5 LSRNISKLQALVSSFQKSLASFQSP-VIAVELLGKALDQYPDIIALKNVHTKLIYLNSHE 63
S + S L +++ + L+S P + K+ ++ I +H +I +
Sbjct: 81 FSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLD 140
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
+ + L+R Y+A G A KVFDE+ R++V +NVMI + + +N AL +++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
N G D+YT +L +C+ L G+ LH +R + +FV N LI MY KCG L
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
A V + M +RDV++WNSM+ GY + +A+ R+M G +P+A T L+
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLL 316
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 39/366 (10%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMR--AYAACGEPGTARKVFDEI-SERNVVFYNVMIRS 105
L+ +H+ +I +PS+ L+R A + G A+ +FD S+ + +N +IR
Sbjct: 21 LRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRG 80
Query: 106 YVNNRWYNDALLVF-REMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
+ N+ +++L + R +++ RPD +T+ LK+C ++ L++HG++++
Sbjct: 81 FSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLD 140
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
+ V L+ Y G + A V DEMP RD+VSWN M+ ++ + AL + + M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNV-------------------------LYVK----- 254
+ G D+ T+ +L+ + + S+ N+ +Y K
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 255 ---DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+F + K+ +++WN MI Y + AI + +M S V P+AIT +L C
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 312 DLSALLLGRRIHEYVERK-KLRPNLLLENSLIDMYARCGCLEDA-QKVFDKMKFRDVASW 369
+ G E + + L PN+ ++D+Y R G LE++ + ++ D W
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLW 380
Query: 370 TSLISA 375
+L+ +
Sbjct: 381 RTLLGS 386
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 335 bits (859), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 182/528 (34%), Positives = 294/528 (55%), Gaps = 38/528 (7%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
++ LK H +I + + K + A + G A VF N +N MIR
Sbjct: 27 NLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIR 86
Query: 105 SYV---NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR 161
+ ++ A+ V+R++ +PD +T+P VLK ++ FG Q+HG ++
Sbjct: 87 ALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG 146
Query: 162 LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR 221
D ++ V GLI MY CG L +AR + DEM +DV WN+++AGY +
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK------------ 194
Query: 222 EMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMP 281
+G+ +A ++ +MP ++ VSW +I+ Y K+
Sbjct: 195 ----VGEMDEARSLLEMMPCWV-------------------RNEVSWTCVISGYAKSGRA 231
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
AI+++ +M VEPD +T +VL AC DL +L LG RI YV+ + + + L N++
Sbjct: 232 SEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV 291
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
IDMYA+ G + A VF+ + R+V +WT++I+ G G ALA+F+ M +G+ P+
Sbjct: 292 IDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
+ F+AILSACSH G ++ GK F M Y I P IEH+ C++DLLGRAG++ EA +VIK
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 462 QMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKE 521
MP + N +WG+LL++ V+ ++++G A L++L P SG Y+LL+N+Y+ GRW E
Sbjct: 412 SMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDE 471
Query: 522 VTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
+R++MK ++K G S++E+ ++V+ F++GD +HPQ + I+E L
Sbjct: 472 SRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEIL 519
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 211/637 (33%), Positives = 326/637 (51%), Gaps = 77/637 (12%)
Query: 32 AVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEI 91
A LL +D +A VH I + L KL+ Y+A A+ + +
Sbjct: 46 AASLLSACVDVRA-FLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS 104
Query: 92 SERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGL 151
+ + +NV+I SY N + + + ++ MV+ G RPD +TYP VLKAC + ++ FG
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 152 QLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD--------------- 196
+HG++ +L+V N LISMY + + AR + D M RD
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 197 --------------------VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTM- 235
V++WN + G Q + AL + M + D M
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 236 -----ASLMPAV----------TNTSSDNVLYVKDIFINL-----------------EKK 263
SL+ A+ ++S D + V++ I + E+
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
SL +WN +I+ Y + + A L +M + +P++IT AS+LP C ++ L G+ H
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 324 EYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
Y+ R+K + +L NSL+D+YA+ G + A++V D M RD ++TSLI YG G+G
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEG 464
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
ALALF EM SGI PDH+ VA+LSACSHS L+ EG+ F +M +Y I P ++HF+C
Sbjct: 465 GVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSC 524
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ 502
+VDL GRAG + +A D+I MP +P+ W TLL++C ++ N IG AA+ LL++ PE
Sbjct: 525 MVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN 584
Query: 503 SGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQS 562
GYYVL++N+YA AG W ++ EVR++M+ ++K PG + ++ +S F GDTS P++
Sbjct: 585 PGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEA 644
Query: 563 KEIYEELYVLVGKMKE-LGYVPETDSALHDVEEEDKE 598
Y L L MK+ GY A++ V+ D+E
Sbjct: 645 CNTYPLLDGLNQLMKDNAGY------AINKVQSSDEE 675
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 289 LQMEKSEVEPDAI---TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
L+++ S D + + AS+L AC D+ A L G ++H + + + +L L+ Y
Sbjct: 29 LRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFY 88
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
+ +AQ + + W LI++Y +A + M + GI PD +
Sbjct: 89 SAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYP 148
Query: 406 AILSACSHSGLLEEGKV 422
++L AC + + G+V
Sbjct: 149 SVLKACGETLDVAFGRV 165
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 334 bits (856), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/560 (34%), Positives = 303/560 (54%), Gaps = 40/560 (7%)
Query: 53 HTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWY 112
H+ +I +N +G L+ YA CG AR++F+ + +R+ V +N +I SYV +
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 113 NDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGL 172
++A +F+ M G D LKAC+ L G Q+H +K LD +L G+ L
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 173 ISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDA 232
I MY KCG + +AR V +P VVS N+++AGY+QN ++A+ + +EM G P
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSE 629
Query: 233 GTMASLMPAVTNTSSDNV--------------------------LYVKD--------IFI 258
T A+++ A S + +Y+ +F
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 259 NLEK-KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
L KS+V W M++ + +N A+ Y +M V PD T +VL C LS+L
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLISAY 376
GR IH + + L N+LIDMYA+CG ++ + +VFD+M+ R +V SW SLI+ Y
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
G +AL +F M+ S I PD I F+ +L+ACSH+G + +G+ F+ M Y I R
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL 496
++H AC+VDLLGR G + EA D I+ L+P+ R+W +LL +CR++ + G ++A+ L+
Sbjct: 870 VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLI 929
Query: 497 QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGD 556
+L P+ S YVLLSNIYA G W++ +R +M+ R ++K PG S +++ + H F AGD
Sbjct: 930 ELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGD 989
Query: 557 TSHPQSKEI---YEELYVLV 573
SH + +I E+LY L+
Sbjct: 990 KSHSEIGKIEMFLEDLYDLM 1009
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 223/465 (47%), Gaps = 45/465 (9%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
VH + I L N +G L+ Y+ C + A KVF+ + E+N VF+N MIR Y +N
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
+ + +F +M + G+ D++T+ +L C+ S +L G Q H ++K +L NLFVGN
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
L+ MY KCG L +AR + + M RD V+WN+++ Y Q+ +A ++ + M+ G D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 232 AGTMASLMPAVTNTSS----------------DNVLY--------------VKD---IFI 258
+AS + A T+ D L+ +KD +F
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 259 NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL 318
+L + S+VS N +I Y +N++ A+ L+ +M V P IT A+++ AC +L L
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 319 GRRIHEYVERKKLRP-NLLLENSLIDMYARCGCLEDAQKVFDKMKF-RDVASWTSLISAY 376
G + H + ++ L SL+ MY + +A +F ++ + + WT ++S +
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK----VYFKQMTDDYR 432
G AL + EM++ G+ PD FV +L CS L EG+ + F D
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+T L+D+ + G + + V +M N W +L++
Sbjct: 768 LTSNT-----LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 220/449 (48%), Gaps = 16/449 (3%)
Query: 38 KALDQYPDIIAL-----KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEIS 92
K D+ P +AL K VH+K + L LG ++ YA C + A K FD +
Sbjct: 63 KVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL- 121
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E++V +N M+ Y + L F + P+ +T+ VL C+ N+ FG Q
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMR 212
+H +M+K+ L+ N + G L+ MY KC + +AR V + + + V W + +GY +
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 213 FDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKD---IFINLEKKSLVSWN 269
++A+ V M D G +PD +++ +KD +F + +V+WN
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK-----LKDARLLFGEMSSPDVVAWN 296
Query: 270 VMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
VMI+ + K AI+ + M KS V+ T SVL A G ++ L LG +H +
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
L N+ + +SL+ MY++C +E A KVF+ ++ ++ W ++I Y G+ + LF
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
+M++SG + D F ++LS C+ S LE G F + ++ + LVD+ +
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS-QFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
G +++A + ++M + + W T++ S
Sbjct: 476 CGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 221/536 (41%), Gaps = 76/536 (14%)
Query: 69 IKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFR 128
+ ++ Y G+ AR +F E+S +VV +NVMI + A+ F M +
Sbjct: 265 VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 129 PDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
T VL A NL GL +H +K+ L N++VG+ L+SMY KC + A V
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA------- 241
+ + ++ V WN+M+ GYA N +E+ +M G D T SL+
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 242 ---------------VTNTSSDNVLY-----------VKDIFINLEKKSLVSWNVMITVY 275
N N L + IF + + V+WN +I Y
Sbjct: 445 EMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSY 504
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+++ A DL+ +M + D AS L AC + L G+++H + L +L
Sbjct: 505 VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDL 564
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+SLIDMY++CG ++DA+KVF + V S +LI+ Y A+ LF EM
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTR 623
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG------- 448
G++P I F I+ AC L G + Q+T + E+ + LLG
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLG--ISLLGMYMNSRG 680
Query: 449 ----------------------------RAGRVDEAYDVIKQMPLE---PNERVWGTLLS 477
+ G +EA K+M + P++ + T+L
Sbjct: 681 MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 478 SCRVYSNMDIGLLAADNLLQLSPEQSGYYV-LLSNIYAKAGRWKEVTEVRSLMKRR 532
C V S++ G + L+ + L ++YAK G K ++V M+RR
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 167/369 (45%), Gaps = 39/369 (10%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K VH + + G L+ Y+ CG ARKVF + E +VV N +I Y N
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN 608
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW-NLFV 168
+A+++F+EM+ G P T+ +++AC ++L G Q HG + K ++
Sbjct: 609 N-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPR-RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
G L+ MY + EA + E+ + +V W M++G++QN +++AL+ +EM G
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDG 727
Query: 228 QKPDAGTMASLMPAVTNTSS----------------------DNVL---YVK-------- 254
PD T +++ + SS N L Y K
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 255 DIFINLEKKS-LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+F + ++S +VSWN +I Y KN +A+ ++ M +S + PD IT VL AC
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 314 SALLLGRRIHE-YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTS 371
+ GR+I E + + + + ++D+ R G L++A + + D W+S
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 372 LISAYGMTG 380
L+ A + G
Sbjct: 908 LLGACRIHG 916
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 166/340 (48%), Gaps = 33/340 (9%)
Query: 177 GKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMA 236
G+C L ++R V DEMP+R ++ A +++++ +D G+ +A +
Sbjct: 54 GQCK-LFKSRKVFDEMPQRLALALRIGKAVHSKSLILG--------IDSEGRLGNA--IV 102
Query: 237 SLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
L S Y + F LE K + +WN M+++Y PG + ++ + ++++
Sbjct: 103 DLYAKCAQVS-----YAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 156
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
P+ T + VL C + + GR+IH + + L N +L+DMYA+C + DA++
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
VF+ + + WT L S Y G A+ +F M++ G PDH+AFV +++ G
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 417 LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG---RVDEAYDVIKQMPLEPNERVWG 473
L++ ++ F +M+ +P + + ++ G+ G E + +++ ++ G
Sbjct: 277 LKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 474 TLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIY 513
++LS+ + +N+D+GL+ ++L L SNIY
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLG--------LASNIY 363
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 273/456 (59%), Gaps = 14/456 (3%)
Query: 222 EMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMP 281
+++ G D+ +L+ A + +++ +F + + + SWN +I + +
Sbjct: 134 QINRRGLSADSLLCTTLLDAYSKNG--DLISAYKLFDEMPVRDVASWNALIAGLVSGNRA 191
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI-HEYVERKKLRPNLLLENS 340
A++LY +ME + +T + L AC L + G I H Y N+++ N+
Sbjct: 192 SEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSN-----DNVIVSNA 246
Query: 341 LIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLISAYGMTGQGCNALALFSEMQNSGISP 399
IDMY++CG ++ A +VF++ + V +W ++I+ + + G+ AL +F +++++GI P
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
D ++++A L+AC H+GL+E G F M + ++H+ C+VDLL RAGR+ EA+D+
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDI 365
Query: 460 IKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRW 519
I M + P+ +W +LL + +YS++++ +A+ + ++ G +VLLSN+YA GRW
Sbjct: 366 ICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRW 425
Query: 520 KEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKEL 579
K+V VR M+ ++++K PG+S +E +H F D SH Q +EIYE++ + K++E
Sbjct: 426 KDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRED 485
Query: 580 GYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALL----NTHESPIRITKNLRVCGDCH 635
GYV +T LHD+ EE+KE L HSEKLA+ + L+ ESP+R+ NLR+CGDCH
Sbjct: 486 GYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCH 545
Query: 636 IAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+ K ISKI REI++RD RFH FKDG CSC D+W
Sbjct: 546 VVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 13/267 (4%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM------EKSEVEPDAITCAS 305
+ IF + K WN +I + +S P A Y M + DA+TC+
Sbjct: 55 FAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSF 114
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
L AC ++H + R+ L + LL +L+D Y++ G L A K+FD+M RD
Sbjct: 115 TLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRD 174
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFK 425
VASW +LI+ + A+ L+ M+ GI + VA L ACSH G ++EG+ F
Sbjct: 175 VASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH 234
Query: 426 QMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM 485
++D I +D+ + G VD+AY V +Q + + W T+++ V+
Sbjct: 235 GYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEA 289
Query: 486 DIGLLAADNLLQ--LSPEQSGYYVLLS 510
L D L + P+ Y L+
Sbjct: 290 HRALEIFDKLEDNGIKPDDVSYLAALT 316
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 164/369 (44%), Gaps = 45/369 (12%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMR--AYAACGEPGTARKVFDEISERNVVFYNVMIRSY 106
+K + + + ++ L +L+ A + G+ A ++F I + +N +IR +
Sbjct: 19 IKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGF 78
Query: 107 VNNRWYNDALLVFREMVNGGF------RPDNYTYPCVLKACS---CSDNLRFGLQLHGAM 157
+ + A +R M+ R D T LKAC+ CS + QLH +
Sbjct: 79 AGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMD---QLHCQI 135
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
+ L + + L+ Y K G L+ A + DEMP RDV SWN+++AG R +A+
Sbjct: 136 NRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAM 195
Query: 218 EVCREMDDLGQKPDAGTMASLMPAVTNT-------------SSDNV--------LYVKDI 256
E+ + M+ G + T+ + + A ++ S+DNV +Y K
Sbjct: 196 ELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCG 255
Query: 257 FIN---------LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVL 307
F++ KKS+V+WN MIT + + A++++ ++E + ++PD ++ + L
Sbjct: 256 FVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAAL 315
Query: 308 PACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK-FRDV 366
AC + G + + K + N+ ++D+ +R G L +A + M D
Sbjct: 316 TACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP 375
Query: 367 ASWTSLISA 375
W SL+ A
Sbjct: 376 VLWQSLLGA 384
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 157/353 (44%), Gaps = 36/353 (10%)
Query: 25 SFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTA 84
SF A L A+DQ +H ++ + L L+ AY+ G+ +A
Sbjct: 113 SFTLKACARALCSSAMDQ---------LHCQINRRGLSADSLLCTTLLDAYSKNGDLISA 163
Query: 85 RKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS 144
K+FDE+ R+V +N +I V+ ++A+ +++ M G R T L ACS
Sbjct: 164 YKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHL 223
Query: 145 DNLRFGLQL-HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNS 202
+++ G + HG + N+ V N I MY KCG + +A V ++ ++ VV+WN+
Sbjct: 224 GDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNT 278
Query: 203 MVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEK 262
M+ G+A + ALE+ +++D G KPD + + + A + V Y +F N+
Sbjct: 279 MITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGL--VEYGLSVFNNMAC 336
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
K + MK+ G +DL + + D I S++P +LL I
Sbjct: 337 KG-------VERNMKHY--GCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEI 387
Query: 323 HEYVERKKLRPNLLLENS---------LIDMYARCGCLEDAQKVFDKMKFRDV 366
+ VE ++ + E L ++YA G +D +V D M+ + V
Sbjct: 388 YSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQV 440
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 196/611 (32%), Positives = 313/611 (51%), Gaps = 76/611 (12%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
+H +++ + + L KL+ Y A VFDEI+ RN YN ++ +Y +
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 111 WYNDALLVFREMVNG------GFRPDNYTYPCVLKACSCSDNLRFG---LQLHGAMLKVR 161
Y DA +F + RPD+ + CVLKA S D+ G Q+HG +++
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 162 LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR 221
D ++FVGNG+I+ Y KC + AR V DEM RDVVSWNSM++GY+Q+ F+D ++ +
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 222 EMDDLGQ-KPDAGTMASLMPAVTNTSSDNVL----------------------------- 251
M KP+ T+ S+ A SSD +
Sbjct: 223 AMLACSDFKPNGVTVISVFQAC-GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 252 -----YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK------------- 293
Y + +F + +K V++ +I+ YM + + A+ L+ +ME
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 294 ------SEV------------EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
EV P+ +T +S+LP+ S L G+ IH + R N+
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+ S+ID YA+ G L AQ+VFD K R + +WT++I+AY + G +A +LF +MQ
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
G PD + A+LSA +HSG + + F M Y I P +EH+AC+V +L RAG++ +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Query: 456 AYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAK 515
A + I +MP++P +VWG LL+ V +++I A D L ++ PE +G Y +++N+Y +
Sbjct: 522 AMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQ 581
Query: 516 AGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGK 575
AGRW+E VR+ MKR ++K PG S +E + +F+A D+S +SKE+YE + LV
Sbjct: 582 AGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVES 641
Query: 576 MKELGYVPETD 586
M + Y+ + +
Sbjct: 642 MSDKEYIRKQE 652
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 153/322 (47%), Gaps = 51/322 (15%)
Query: 151 LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
LQLH ++ + + F+ + LIS Y + +A +V DE+ R+ S+N+++ Y
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 211 MRFDDALEV--------CREMDDLGQKPDAGTMASLMPAVTN------------------ 244
+ DA + C D +PD+ +++ ++ A++
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSD--AARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 245 ------------------TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
T DN+ + +F + ++ +VSWN MI+ Y ++ +
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKK 219
Query: 287 LYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
+Y M S+ +P+ +T SV ACG S L+ G +H+ + ++ +L L N++I Y
Sbjct: 220 MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
A+CG L+ A+ +FD+M +D ++ ++IS Y G A+ALFSEM++ G+S +
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWN 335
Query: 406 AILSACSHSGLLEEGKVYFKQM 427
A++S + EE F++M
Sbjct: 336 AMISGLMQNNHHEEVINSFREM 357
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 171/379 (45%), Gaps = 50/379 (13%)
Query: 24 ASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGT 83
+ F+ + V + +A Q D+I VH K+I + + SL ++ YA CG
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 84 ARKVFDEISERNVVFY-------------------------------NVMIRSYVNNRWY 112
AR +FDE+SE++ V Y N MI + N +
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHH 347
Query: 113 NDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGL 172
+ + FREM+ G RP+ T +L + + S NL+ G ++H ++ D N++V +
Sbjct: 348 EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSI 407
Query: 173 ISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDA 232
I Y K G LL A+ V D R +++W +++ YA + D A + +M LG KPD
Sbjct: 408 IDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDD 467
Query: 233 GTMASLMPAVTNTSSDNVLYVKDIFINLEKK-----SLVSWNVMITVYMKNSMPGNAIDL 287
T+ +++ A ++ ++ + IF ++ K + + M++V + +A++
Sbjct: 468 VTLTAVLSAFAHSGDSDM--AQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEF 525
Query: 288 YLQMEKSEVEPDAITCASVLPACGDLSALLLGR----RIHEYVERKKLRPNLLLENSLID 343
+ K ++P A ++L L L + R R+ E +E + ++ N
Sbjct: 526 ---ISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFE-MEPENTGNYTIMAN---- 577
Query: 344 MYARCGCLEDAQKVFDKMK 362
+Y + G E+A+ V +KMK
Sbjct: 578 LYTQAGRWEEAEMVRNKMK 596
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 291/541 (53%), Gaps = 35/541 (6%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA + D+ K +H +L+ + S +N L L+ YA CGE +A KVF++I+ RNVV
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVV 208
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
+ MI YV N + L++F M + YTY ++ AC+ L G HG +
Sbjct: 209 CWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCL 268
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
+K ++ + + L+ MY KCG + AR V +E D+V W +M+ GY N ++AL
Sbjct: 269 VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEAL 328
Query: 218 EVCREMDDLGQKPDAGTMASLMPA---------------------VTNTSSDNVLY---- 252
+ ++M + KP+ T+AS++ + +T+ N L
Sbjct: 329 SLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYA 388
Query: 253 -------VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
K +F +K +V+WN +I+ + +N A+ L+ +M V P+ +T AS
Sbjct: 389 KCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVAS 448
Query: 306 VLPACGDLSALLLGRRIHEYVERKKL--RPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
+ AC L +L +G +H Y + ++ + +L+D YA+CG + A+ +FD ++
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEE 508
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
++ +W+++I YG G +L LF EM P+ F +ILSAC H+G++ EGK Y
Sbjct: 509 KNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKY 568
Query: 424 FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYS 483
F M DY TP +H+ C+VD+L RAG +++A D+I++MP++P+ R +G L C ++S
Sbjct: 569 FSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHS 628
Query: 484 NMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNV 543
D+G + +L L P+ + YYVL+SN+YA GRW + EVR+LMK+R + K G S +
Sbjct: 629 RFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
Query: 544 E 544
E
Sbjct: 689 E 689
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/547 (25%), Positives = 248/547 (45%), Gaps = 47/547 (8%)
Query: 3 PPLSRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSH 62
PP + + ++ L+ + + +S + L L + +I +L+ H L
Sbjct: 16 PPRCVSFTTIKELILTEENDGSSLHYAASSPCFL--LLSKCTNIDSLRQSHGVLTGNGLM 73
Query: 63 ENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREM 122
+ S+ KL+ Y G AR VFD+I E + + VM+R Y N+ + + ++ +
Sbjct: 74 GDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLL 133
Query: 123 VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCL 182
+ GFR D+ + LKAC+ +L G ++H ++KV ++ V GL+ MY KCG +
Sbjct: 134 MKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEI 192
Query: 183 LEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEV---CREMDDLGQKPDAGTM---- 235
A V +++ R+VV W SM+AGY +N ++ L + RE + LG + GT+
Sbjct: 193 KSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMAC 252
Query: 236 -------------ASLMPAVTNTSSDNVLYVKDIFINLEKKS-------------LVSWN 269
L+ + SS V + D+++ S LV W
Sbjct: 253 TKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWT 312
Query: 270 VMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
MI Y N A+ L+ +M+ E++P+ +T ASVL CG + L LGR +H +
Sbjct: 313 AMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV 372
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
+ + + N+L+ MYA+C DA+ VF+ +D+ +W S+IS + G AL LF
Sbjct: 373 GIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFACLVDLLG 448
M + ++P+ + ++ SAC+ G L G ++ + + + + L+D
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 449 RAGRVDEA---YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL--QLSPEQS 503
+ G A +D I+ E N W ++ + L + +L Q P +S
Sbjct: 492 KCGDPQSARLIFDTIE----EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNES 547
Query: 504 GYYVLLS 510
+ +LS
Sbjct: 548 TFTSILS 554
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 297/541 (54%), Gaps = 38/541 (7%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG-FRPDNYT 133
YA G+ ++R+VFD ERN+ +N MI YV N +++ +F E + D T
Sbjct: 261 YAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVT 320
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP 193
Y A S + G Q HG + K + + + N L+ MY +CG + ++ V M
Sbjct: 321 YLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMR 380
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV--- 250
RDVVSWN+M++ + QN D+ L + EM G K D T+ +L+ A +N + +
Sbjct: 381 ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQ 440
Query: 251 ---------------------LYVKDIFINLEKKSL----------VSWNVMITVYMKNS 279
+Y K I + +K +WN MI+ Y +N
Sbjct: 441 THAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNG 500
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLEN 339
++ +M + + P+A+T AS+LPAC + ++ LG+++H + R+ L N+ + +
Sbjct: 501 HTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS 560
Query: 340 SLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISP 399
+L+DMY++ G ++ A+ +F + K R+ ++T++I YG G G A++LF MQ SGI P
Sbjct: 561 ALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKP 620
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
D I FVA+LSACS+SGL++EG F++M + Y I P EH+ C+ D+LGR GRV+EAY+
Sbjct: 621 DAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEF 680
Query: 460 IKQMPLEPN-ERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ--SGYYVLLSNIYAKA 516
+K + E N +WG+LL SC+++ +++ ++ L + + SGY VLLSN+YA+
Sbjct: 681 VKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEE 740
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKM 576
+WK V +VR M+ + ++K G S +E+ V+ F++ D HP S EIY+ + L M
Sbjct: 741 QKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDM 800
Query: 577 K 577
+
Sbjct: 801 R 801
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/537 (27%), Positives = 247/537 (45%), Gaps = 87/537 (16%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG--FRPDNYTYPC 136
G P AR++FD I + V +N +I ++ N ++ALL + M D YTY
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKC----GCLLE--ARYVLD 190
LKAC+ + NL+ G +H +++ + + V N L++MY C C R V D
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCRE---MDDLGQKPDAGTMASLMPAVTNTSS 247
M R++VV+WN++++ Y + R E CR+ M + KP + ++ PAV+ + S
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGR---NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 248 ---DNVLY----------VKDIFI------------NLE----------KKSLVSWNVMI 272
NV Y VKD+F+ ++E ++++ WN MI
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 273 TVYMKNSMPGNAIDLYLQ-MEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
VY++N +I+L+L+ + E+ D +T A L + LGR+ H +V +
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
+++ NSL+ MY+RCG + + VF M+ RDV SW ++ISA+ G L L E
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 392 MQNSGISPDHIAFVAILSACS-----------HSGLLEEGKVYFKQMT----DDY----- 431
MQ G D+I A+LSA S H+ L+ +G + F+ M D Y
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMYSKSGL 468
Query: 432 -RITPRI-----------EHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLL 476
RI+ ++ + ++ + G ++ + V ++M + PN ++L
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Query: 477 SSCRVYSNMDIG-LLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRR 532
+C ++D+G L ++ Q + L ++Y+KAG K ++ S K R
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 168/349 (48%), Gaps = 39/349 (11%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
LM Y+ CG + VF + ER+VV +N MI ++V N ++ L++ EM GF+ D
Sbjct: 359 LMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKID 418
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T +L A S N G Q H +++ + + + + LI MY K G + ++ + +
Sbjct: 419 YITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFE 477
Query: 191 E--MPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS- 247
RD +WNSM++GY QN + V R+M + +P+A T+AS++PA + S
Sbjct: 478 GSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSV 537
Query: 248 ----------------DNVL----------------YVKDIFINLEKKSLVSWNVMITVY 275
NV Y +D+F ++++ V++ MI Y
Sbjct: 538 DLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGY 597
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV-ERKKLRPN 334
++ M AI L+L M++S ++PDAIT +VL AC + G +I E + E ++P+
Sbjct: 598 GQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPS 657
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKM-KFRDVAS-WTSLISAYGMTGQ 381
+ DM R G + +A + + + ++A W SL+ + + G+
Sbjct: 658 SEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGE 706
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 17/156 (10%)
Query: 5 LSRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHEN 64
L +NI V+S + + S + +L G ++ QY D +N
Sbjct: 513 LEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLD-----------------QN 555
Query: 65 PSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN 124
+ L+ Y+ G A +F + ERN V Y MI Y + A+ +F M
Sbjct: 556 VFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQE 615
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKV 160
G +PD T+ VL ACS S + GL++ M +V
Sbjct: 616 SGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV 651
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 332 bits (851), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 312/563 (55%), Gaps = 37/563 (6%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L L+ +Y G AR +FDE+ +R+VV + MI Y ++ + A F EMV G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
P+ +T VLK+C L +G +HG ++K+ ++ +L+V N +++MY C +EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 187 -YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM--DDLGQKPDAGTMASLMPAVT 243
+ ++ ++ V+W +++ G+ L++ ++M ++ P T+A A
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 244 NTSSDNV-----------------------LY--------VKDIFINLEKKSLVSWNVMI 272
++ + LY K F +E K L++WN +I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
+ ++ S A+ ++ + E P+ T S++ AC +++AL G+++H + R+
Sbjct: 287 S-ELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKM-KFRDVASWTSLISAYGMTGQGCNALALFSE 391
N+ L N+LIDMYA+CG + D+Q+VF ++ R++ SWTS++ YG G G A+ LF +
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M +SGI PD I F+A+LSAC H+GL+E+G YF M +Y I P + + C+VDLLGRAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 452 RVDEAYDVIKQMPLEPNERVWGTLLSSCRVYS-NMDIGLLAADNLLQLSPEQSGYYVLLS 510
++ EAY+++++MP +P+E WG +L +C+ + N I LAA +++L P+ G YV+LS
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELY 570
IYA G+W + VR +M+ +K G+S + + +QV +F D P + +Y L
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLG 585
Query: 571 VLVGKMKELGYVPETDSALHDVE 593
+L+ + +E GYVPE DS ++D E
Sbjct: 586 LLIEETREAGYVPELDSLVNDQE 608
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 40/333 (12%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H +I N + ++ Y CG A+ F E+ +++++ +N +I S +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI-SELER 291
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
++ALL+F+ + GF P+ YT+ ++ AC+ L G QLHG + + + N+ +
Sbjct: 292 SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELA 351
Query: 170 NGLISMYGKCGCLLEARYVLDEM-PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
N LI MY KCG + +++ V E+ RR++VSW SM+ GY + +A+E+ +M G
Sbjct: 352 NALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGI 411
Query: 229 KPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKN---------- 278
+PD +++ A + L +K L +NVM + Y N
Sbjct: 412 RPDRIVFMAVLSACRHAG-------------LVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 279 ---SMPGNAIDLYLQMEKSEVEPDAITCASVLPAC-----GDLSALLLGRRIHEYVERKK 330
G + Y +E+ +PD T ++L AC L + L R++ E
Sbjct: 459 DLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVME------ 512
Query: 331 LRPNLLLENSLID-MYARCGCLEDAQKVFDKMK 362
L+P ++ ++ +YA G D +V M+
Sbjct: 513 LKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMR 545
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
K + + +L +LI Y G +E+A+ +FD+M RDV +WT++I+ Y + A F
Sbjct: 40 KPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECF 99
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
EM G SP+ ++L +C + +L G
Sbjct: 100 HEMVKQGTSPNEFTLSSVLKSCRNMKVLAYG 130
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 188/547 (34%), Positives = 300/547 (54%), Gaps = 31/547 (5%)
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFY-NVMIRSYVNNRWYNDALLVFREM 122
N + K + A+ G ARK+FD+ +R+ F N MI++Y+ R Y D+ ++R++
Sbjct: 9 NVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDL 68
Query: 123 VNGG-FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGC 181
F PDN+T+ + K+CS S + GLQLH + + +++V G++ MY K G
Sbjct: 69 RKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK 128
Query: 182 LLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM-------------DDLGQ 228
+ AR DEMP R VSW ++++GY + D A ++ +M D +
Sbjct: 129 MGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVK 188
Query: 229 KPDAGTMASLMPAVTN-------TSSDNVLYVKDI------FINLEKKSLVSWNVMITVY 275
D + L +T+ T +KDI F + +++LVSWN MI Y
Sbjct: 189 SGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGY 248
Query: 276 MKNSMPGNAIDLYLQME-KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN 334
+N P I L+ +M+ + ++PD +T SVLPA D AL LG H +V+RKKL
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
+ + +++DMY++CG +E A+++FD+M + VASW ++I Y + G AL LF M
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI 368
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVD 454
PD I +A+++AC+H GL+EEG+ +F M + + +IEH+ C+VDLLGRAG +
Sbjct: 369 EE-KPDEITMLAVITACNHGGLVEEGRKWFHVMRE-MGLNAKIEHYGCMVDLLGRAGSLK 426
Query: 455 EAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYA 514
EA D+I MP EPN + + LS+C Y +++ ++L P+ G YVLL N+YA
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYA 486
Query: 515 KAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVG 574
RW + V+++M++ + +K G S +E+N V F++GDT+HP + I+ L L+
Sbjct: 487 ADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLM 546
Query: 575 KMKELGY 581
M E Y
Sbjct: 547 HMNEEKY 553
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 127/268 (47%), Gaps = 13/268 (4%)
Query: 61 SHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR 120
+H+ ++ Y + ARK+FD + ERN+V +N MI Y N+ + + +F+
Sbjct: 203 THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 121 EM-VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKC 179
EM PD+ T VL A S + L G H + + +LD + V ++ MY KC
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKC 322
Query: 180 GCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
G + +A+ + DEMP + V SWN+M+ GYA N AL++ M + +KPD TM +++
Sbjct: 323 GEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVI 381
Query: 240 PA-----VTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKS 294
A + ++++ +N + + + M+ + + A DL M
Sbjct: 382 TACNHGGLVEEGRKWFHVMREMGLNAK---IEHYGCMVDLLGRAGSLKEAEDLITNM--- 435
Query: 295 EVEPDAITCASVLPACGDLSALLLGRRI 322
EP+ I +S L ACG + RI
Sbjct: 436 PFEPNGIILSSFLSACGQYKDIERAERI 463
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 290/533 (54%), Gaps = 40/533 (7%)
Query: 76 AACGEPGT---ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNY 132
A+CG G ARKVFDE+ +R V YN MI Y + ++ L ++ +M+ +PD+
Sbjct: 58 ASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSS 117
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
T+ +KAC L G + + ++FV + ++++Y KCG + EA + +M
Sbjct: 118 TFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKM 177
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV-- 250
+RDV+ W +MV G+AQ + A+E REM + G D M L+ A + +
Sbjct: 178 AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGR 237
Query: 251 -----------------------LYVKDIFINLEK--------KSLVSWNVMITVYMKNS 279
+Y K FI + K+ VSW +I+ + +N
Sbjct: 238 SVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNG 297
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLEN 339
+ A + ++M+ +PD +T VL AC + +L GR +H Y+ ++ + + +
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTAT 356
Query: 340 SLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISP 399
+L+DMY++CG L ++++F+ + +D+ W ++IS YG+ G G ++LF +M S I P
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
DH F ++LSA SHSGL+E+G+ +F M + Y+I P +H+ CL+DLL RAGRV+EA D+
Sbjct: 417 DHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDM 476
Query: 460 IKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRW 519
I L+ +W LLS C + N+ +G +AA+ +LQL+P+ G L+SN +A A +W
Sbjct: 477 INSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKW 536
Query: 520 KEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVL 572
KEV +VR LM+ + K PG S +E+N ++ TFL D SH E Y L VL
Sbjct: 537 KEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH---HEHYHMLQVL 586
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 34/339 (10%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y CG+ A +F ++++R+V+ + M+ + A+ +REM N GF D
Sbjct: 157 VLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRD 216
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+L+A + + G +HG + + L N+ V L+ MY K G + A V
Sbjct: 217 RVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFS 276
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS--- 247
M + VSW S+++G+AQN + A E EM LG +PD T+ ++ A + S
Sbjct: 277 RMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKT 336
Query: 248 --------------DNV-------LYVK--------DIFINLEKKSLVSWNVMITVYMKN 278
D V +Y K +IF ++ +K LV WN MI+ Y +
Sbjct: 337 GRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIH 396
Query: 279 SMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRR-IHEYVERKKLRPNLLL 337
+ L+L+M +S +EPD T AS+L A + G+ + + K++P+
Sbjct: 397 GNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKH 456
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRD-VASWTSLISA 375
LID+ AR G +E+A + + K + + W +L+S
Sbjct: 457 YVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%), Gaps = 1/196 (0%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
++VH L N + L+ YA G A +VF + + V + +I + N
Sbjct: 237 RSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQN 296
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
N A EM + GF+PD T VL ACS +L+ G +H +LK R +
Sbjct: 297 GLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK-RHVLDRVTA 355
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
L+ MY KCG L +R + + + R+D+V WN+M++ Y + + + + +M + +
Sbjct: 356 TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIE 415
Query: 230 PDAGTMASLMPAVTNT 245
PD T ASL+ A++++
Sbjct: 416 PDHATFASLLSALSHS 431
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 321 RIHEYVERKKLRPNLLLENSLI--DMYARCGCLED---AQKVFDKMKFRDVASWTSLISA 375
+IH +V + LL S I D+ A CG + + A+KVFD++ R V+ + S+I
Sbjct: 35 QIHAFV----ISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
Y L L+ +M I PD F + AC +LE+G+ + + D
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVD---FGY 147
Query: 436 RIEHFAC--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+ + F C +++L + G++DEA + +M + + W T+++
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA-KRDVICWTTMVT 190
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 186/576 (32%), Positives = 312/576 (54%), Gaps = 51/576 (8%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
L+ + +++ L+S E P+ L+ G+ + +F E N +N MIR N
Sbjct: 53 LRQIQAQML-LHSVEKPNF---LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTN 108
Query: 109 NRWYND---ALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN 165
+ND AL ++R M G +PD +TY V AC+ + + G +H ++ KV L+ +
Sbjct: 109 T--WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERD 166
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
+ + + LI MY KCG + AR + DE+ RD VSWNSM++GY++ DA+++ R+M++
Sbjct: 167 VHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE 226
Query: 226 LGQKPDAGTMASLMPAVTNTSS---------------------------------DNVLY 252
G +PD T+ S++ A ++ ++
Sbjct: 227 EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDS 286
Query: 253 VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+ +F + KK V+W MITVY +N A L+ +MEK+ V PDA T ++VL ACG
Sbjct: 287 ARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGS 346
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
+ AL LG++I + L+ N+ + L+DMY +CG +E+A +VF+ M ++ A+W ++
Sbjct: 347 VGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAM 406
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
I+AY G AL LF M + P I F+ +LSAC H+GL+ +G YF +M+ +
Sbjct: 407 ITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFG 463
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAA 492
+ P+IEH+ ++DLL RAG +DEA++ +++ P +P+E + +L +C ++ I A
Sbjct: 464 LVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAM 523
Query: 493 DNLLQL-SPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHT 551
L+++ + +G YV+ SN+ A W E ++R+LM+ R + KTPG S +E+ ++
Sbjct: 524 RMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELME 583
Query: 552 FLAGDTSHPQSKEIYEELY-VLVGKMK----ELGYV 582
FLAG +E L+ +LV +MK E GY+
Sbjct: 584 FLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFGYI 619
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 310/608 (50%), Gaps = 67/608 (11%)
Query: 8 NISKLQA----LVSSFQKSLASFQSPVIAVELLGKALDQ--YPD---------------- 45
N+S LQ + + KSLA +S + L G+ Q YPD
Sbjct: 2 NMSLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRK 61
Query: 46 IIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRS 105
+I + VH + + + LM YA+ G+ KVFDE+ +R+VV +N +I S
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 106 YVNNRWYNDALLVFREMVN-GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
YV N + DA+ VF+ M + D T L ACS NL G +++ + +
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEM 180
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
++ +GN L+ M+ KCGCL +AR V D M ++V W SMV GY R D+A
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEA-------- 232
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNA 284
+ +F K +V W M+ Y++ + A
Sbjct: 233 -----------------------------RVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDM 344
++L+ M+ + + PD S+L C AL G+ IH Y+ ++ + ++ +L+DM
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 345 YARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAF 404
YA+CGC+E A +VF ++K RD ASWTSLI M G AL L+ EM+N G+ D I F
Sbjct: 324 YAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITF 383
Query: 405 VAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP 464
VA+L+AC+H G + EG+ F MT+ + + P+ EH +CL+DLL RAG +DEA ++I +M
Sbjct: 384 VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
Query: 465 LEPNER---VWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKE 521
E +E V+ +LLS+ R Y N+ I A+ L ++ S + LL+++YA A RW++
Sbjct: 444 GESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWED 503
Query: 522 VTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDT--SHPQSKEIYEELYVLVGKMKEL 579
VT VR MK IRK PG S++E++ H F+ GD SHP+ EI L+ M +L
Sbjct: 504 VTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLDL 563
Query: 580 GYVPETDS 587
+ E DS
Sbjct: 564 EH-KEIDS 570
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 325 bits (832), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 185/582 (31%), Positives = 302/582 (51%), Gaps = 36/582 (6%)
Query: 24 ASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGT 83
F+ + KA + D+ + VH LI + +G + + C
Sbjct: 46 GGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDY 105
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A KVF+ + ER+ +N M+ + + + A +FREM PD+ T ++++ S
Sbjct: 106 AAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR--RDVVSWN 201
+L+ +H +++ +D + V N IS YGKCG L A+ V + + R R VVSWN
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 202 SMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT---------------- 245
SM Y+ DA + M KPD T +L + N
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHL 285
Query: 246 SSDNVLYVKDIFINLEKKS-----------------LVSWNVMITVYMKNSMPGNAIDLY 288
+D + + FI++ KS VSW VMI+ Y + A+ L+
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL-RPNLLLENSLIDMYAR 347
M KS +PD +T S++ CG +L G+ I + R N+++ N+LIDMY++
Sbjct: 346 HAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSK 405
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI 407
CG + +A+ +FD + V +WT++I+ Y + G AL LFS+M + P+HI F+A+
Sbjct: 406 CGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAV 465
Query: 408 LSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEP 467
L AC+HSG LE+G YF M Y I+P ++H++C+VDLLGR G+++EA ++I+ M +P
Sbjct: 466 LQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKP 525
Query: 468 NERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRS 527
+ +WG LL++C+++ N+ I AA++L L P+ + YV ++NIYA AG W +RS
Sbjct: 526 DAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRS 585
Query: 528 LMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
+MK+R I+K PG S +++N + H+F G+ H +++ IY L
Sbjct: 586 IMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTL 627
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 191/416 (45%), Gaps = 40/416 (9%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
+N+ IR VN ++LL+FREM GGF P+N+T+P V KAC+ ++ +H ++
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
K ++FVG + M+ KC + A V + MP RD +WN+M++G+ Q+ D A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 219 VCREMDDLGQKPDAGTMASLMPAVTNTSSDNVL--------------------------- 251
+ REM PD+ T+ +L+ + + S +L
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 252 ------YVKDIF--INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
K +F I+ +++VSWN M Y +A LY M + E +PD T
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
++ +C + L GR IH + ++ N+ I MY++ A+ +FD M
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
R SWT +IS Y G ALALF M SG PD + ++++S C G LE GK +
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK-W 378
Query: 424 FKQMTDDYRITPRIEHFAC--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
D Y R C L+D+ + G + EA D+ P E W T+++
Sbjct: 379 IDARADIYG-CKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIA 432
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
S+ +WN+ I + + P ++ L+ +M++ EP+ T V AC L+ + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
++ + ++ + + +DM+ +C ++ A KVF++M RD +W +++S + +G
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHS---GLLEEGKVYFKQMTDDYRITPRIEHF 440
A +LF EM+ + I+PD + + ++ + S LLE ++ D ++T
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA---- 191
Query: 441 ACLVDLLGRAGRVDEAYDVIKQMPLEPNERV-WGTLLSSCRVY 482
+ G+ G +D A V + + V W ++ + V+
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVF 234
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 303/553 (54%), Gaps = 35/553 (6%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
++VH ++ + +L L+ Y+ CG+ ++ ++F++I+++N V + MI SY
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL-FV 168
+ AL F EM+ G P+ T VL +C +R G +HG ++ LD N +
Sbjct: 282 EFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESL 341
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
L+ +Y +CG L + VL + R++V+WNS+++ YA AL + R+M
Sbjct: 342 SLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRI 401
Query: 229 KPDAGTMASLMPAVTN--------------------------------TSSDNVLYVKDI 256
KPDA T+AS + A N + S +V +
Sbjct: 402 KPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTV 461
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSAL 316
F ++ +S+V+WN M+ + +N AI L+ M S +E + +T +V+ AC + +L
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSL 521
Query: 317 LLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAY 376
G+ +H + L+ +L + +LIDMYA+CG L A+ VF M R + SW+S+I+AY
Sbjct: 522 EKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAY 580
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
GM G+ +A++ F++M SG P+ + F+ +LSAC HSG +EEGK YF M + ++P
Sbjct: 581 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPN 639
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL 496
EHFAC +DLL R+G + EAY IK+MP + VWG+L++ CR++ MDI ++L
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLS 699
Query: 497 QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGD 556
+ + +GYY LLSNIYA+ G W+E +RS MK ++K PG S +E++ +V F AG+
Sbjct: 700 DIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGE 759
Query: 557 TSHPQSKEIYEEL 569
+ Q+ EIY L
Sbjct: 760 ENRIQTDEIYRFL 772
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 219/444 (49%), Gaps = 42/444 (9%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
KL+ +YA G P ++R VF+ + Y V+I+ V + A+ ++ +V+ +
Sbjct: 39 KLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQI 98
Query: 130 DNYTYPCVLKACSCS-DNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
+ +P VL+AC+ S ++L G ++HG ++K +D + + L+ MYG+ G L +A V
Sbjct: 99 SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKV 158
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN---- 244
D MP RD+V+W+++V+ +N AL + + M D G +PDA TM S++
Sbjct: 159 FDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCL 218
Query: 245 -----------------------------TSSDNVLYVKDIFINLEKKSLVSWNVMITVY 275
+ ++L + IF + KK+ VSW MI+ Y
Sbjct: 219 RIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+ A+ + +M KS +EP+ +T SVL +CG + + G+ +H + R++L PN
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNY 338
Query: 336 -LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
L +L+++YA CG L D + V + R++ +W SLIS Y G AL LF +M
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA--CLVDLLGRAGR 452
I PD + +SAC ++GL+ G KQ+ T + F L+D+ ++G
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLG----KQIHGHVIRTDVSDEFVQNSLIDMYSKSGS 454
Query: 453 VDEAYDVIKQMPLEPNERVWGTLL 476
VD A V Q+ + W ++L
Sbjct: 455 VDSASTVFNQIK-HRSVVTWNSML 477
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/563 (25%), Positives = 263/563 (46%), Gaps = 80/563 (14%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
VH ++I ++ + L+ Y G A KVFD + R++V ++ ++ S + N
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
AL +F+ MV+ G PD T V++ C+ LR +HG + + D + + N
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
L++MY KCG LL + + +++ +++ VSW +M++ Y + + AL EM G +P+
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 232 AGTMASLMPAV-------TNTSSDNVLYVKDIFINLEKKSL------------------- 265
T+ S++ + S +++ N E SL
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362
Query: 266 --------VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
V+WN +I++Y M A+ L+ QM ++PDA T AS + AC + +
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
LG++IH +V R + + ++NSLIDMY++ G ++ A VF+++K R V +W S++ +
Sbjct: 423 LGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-----KVYFKQMTDDYR 432
G A++LF M +S + + + F+A++ ACS G LE+G K+ + D +
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT 541
Query: 433 ITPRIEHFA------------------------CLVDLLGRAGRVDEAYDVIKQM---PL 465
T I+ +A +++ G GR+ A QM
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 466 EPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ---LSPEQSGYYVLLSNIYAKAGRWKEV 522
+PNE V+ +LS+C +++ G NL++ +SP S ++ ++ +++G KE
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSP-NSEHFACFIDLLSRSGDLKEA 659
Query: 523 TEVRSLMKRRRIRKTPGISNVEL 545
R I++ P +++ +
Sbjct: 660 --------YRTIKEMPFLADASV 674
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 212/660 (32%), Positives = 324/660 (49%), Gaps = 76/660 (11%)
Query: 86 KVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRPDNYTYPCVLKACSCS 144
K+FDEI +R+V +N ++ S V + A +F EM GF D++T +L +C+ S
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 145 DNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKC------------------------- 179
L G +LHG +++ L L V N LI Y K
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 180 ------GCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMR-------FDDALEVCREMDD- 225
G + A + + ++ +++N+++AG+ +N F D L+ E+ D
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 226 -LGQKPDAGTMAS------------------LMPAVTN------TSSDNVLYVKDIF--- 257
L DA + S P + T + + +++F
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 258 -INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ-MEKSEVEPDAITCASVLPACGDLSA 315
NL+ + +I Y +N +P A+ L+ + + + ++ D ++ +L CG L
Sbjct: 479 PSNLDSSKATT--SIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGF 536
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
+G +IH Y + ++ L NSLI MYA+C +DA K+F+ M+ DV SW SLIS
Sbjct: 537 REMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISC 596
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC--SHSGLLEEGKVYFKQMTDDYRI 433
Y + G ALAL+S M I PD I ++SA + S L + F M Y I
Sbjct: 597 YILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDI 656
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAAD 493
P EH+ V +LG G ++EA D I MP++P V LL SCR++SN + A
Sbjct: 657 EPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAK 716
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFL 553
+L PE Y+L SNIY+ +G W +R M+ R RK P S + +++H+F
Sbjct: 717 LILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFH 776
Query: 554 AGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFA 613
A DTSHPQ K+IY L +L+ + ++GY P T+ L +V+E K+ L HS KLA+ +
Sbjct: 777 ARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYG 836
Query: 614 LL--NTHESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+L NT P+R+ KN+ +CGDCH K IS +V REIV+RD++ FHHF +G CSC D W
Sbjct: 837 ILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 195/453 (43%), Gaps = 78/453 (17%)
Query: 42 QYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNV 101
QY D+ K VH + L E LG L+ Y G P A VF +S VV Y
Sbjct: 92 QYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTA 150
Query: 102 MIRSYVNNRWYNDALLVFREMVNGGF-RPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKV 160
+I + +AL VF M G +P+ YT+ +L AC G+Q+HG ++K
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 161 RLDWNLFVGNGLISMYGK-----CGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDD 215
++FV N L+S+Y K C +L+ + DE+P+RDV SWN++V+ + +
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASWNTVVSSLVKEGKSHK 267
Query: 216 ALEVCREMDDL-GQKPDAGTMASLMPAVTNT----------------------SSDNVLY 252
A ++ EM+ + G D+ T+++L+ + T++ S +N L
Sbjct: 268 AFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALI 327
Query: 253 -----------VKDIFINLEKKSLVSWNVMITVYM-----------------KNSMPGN- 283
V+ ++ + + V++ MIT YM KN++ N
Sbjct: 328 GFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNA 387
Query: 284 -------------AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
A+ L+ M + VE + S + ACG +S + +IH + +
Sbjct: 388 LMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFG 447
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKM--KFRDVASWTSLISAYGMTGQGCNALAL 388
N ++ +L+DM RC + DA+++FD+ + TS+I Y G A++L
Sbjct: 448 TAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSL 507
Query: 389 FSE-MQNSGISPDHIAFVAILSACSHSGLLEEG 420
F + + D ++ IL+ C G E G
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 123/293 (41%), Gaps = 11/293 (3%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER--NVVFYNVMIRSYV 107
+ +H I + NP + L+ C A ++FD+ + +I Y
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYA 496
Query: 108 NNRWYNDALLVF-REMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL 166
N + A+ +F R + D + +L C G Q+H LK ++
Sbjct: 497 RNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDI 556
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
+GN LISMY KC +A + + M DV+SWNS+++ Y D+AL + M++
Sbjct: 557 SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEK 616
Query: 227 GQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
KPD T+ ++ A T S+ + +D+F++++ +++ T + +
Sbjct: 617 EIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMK----TIYDIEPTTEHYTAFV-RVLG 671
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLEN 339
+ +E++E D I V P L ALL RIH K L+L
Sbjct: 672 HWGLLEEAE---DTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILST 721
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/529 (33%), Positives = 292/529 (55%), Gaps = 44/529 (8%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGT---ARKVFDEISERNVVFYNVMIRS 105
LK +H LI + +++ A+ C P A VF I+ +N +N +IR
Sbjct: 41 LKQIHASLIKTGLISDTVTASRVL-AFC-CASPSDMNYAYLVFTRINHKNPFVWNTIIRG 98
Query: 106 YVNNRWYNDALLVFREMV--NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD 163
+ + + A+ +F +M+ + +P TYP V KA R G QLHG ++K L+
Sbjct: 99 FSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLE 158
Query: 164 WNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM 223
+ F+ N ++ MY CGCL+EA + M DVV+WNSM+ G+A+ D A
Sbjct: 159 DDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA------- 211
Query: 224 DDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGN 283
+++F + +++ VSWN MI+ +++N +
Sbjct: 212 ------------------------------QNLFDEMPQRNGVSWNSMISGFVRNGRFKD 241
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
A+D++ +M++ +V+PD T S+L AC L A GR IHEY+ R + N ++ +LID
Sbjct: 242 ALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALID 301
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
MY +CGC+E+ VF+ + ++ W S+I G A+ LFSE++ SG+ PD ++
Sbjct: 302 MYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVS 361
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
F+ +L+AC+HSG + +F+ M + Y I P I+H+ +V++LG AG ++EA +IK M
Sbjct: 362 FIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM 421
Query: 464 PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVT 523
P+E + +W +LLS+CR N+++ AA L +L P+++ YVLLSN YA G ++E
Sbjct: 422 PVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAV 481
Query: 524 EVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVL 572
E R LMK R++ K G S++E++ +VH F++ +HP+S EIY L +L
Sbjct: 482 EQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 189/654 (28%), Positives = 333/654 (50%), Gaps = 48/654 (7%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H+ +I N L L+ Y+ + A +V + E++V + ++ +V N
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+A+ F EM + G +P+N+TY +L CS +L FG Q+H +KV + + VG
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 170 NGLISMYGKCGCL-LEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
N L+ MY KC +EA V M +VVSW +++ G + D + EM
Sbjct: 364 NALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 229 KPDAGTMASLMPAVTN---------------------------------TSSDNVLYVKD 255
+P+ T++ ++ A + SS V Y +
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+ +++++ +++ ++T + + A+ + M + D ++ + A +L A
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGA 543
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L G+ +H Y + + NSL+DMY++CG LEDA+KVF+++ DV SW L+S
Sbjct: 544 LETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSG 603
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
G +AL+ F EM+ PD + F+ +LSACS+ L + G YF+ M Y I P
Sbjct: 604 LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEP 663
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
++EH+ LV +LGRAGR++EA V++ M L+PN ++ TLL +CR N+ +G A+
Sbjct: 664 QVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKG 723
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
L L+P Y+LL+++Y ++G+ + + R+LM +R+ K G S VE+ +VH+F++
Sbjct: 724 LALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSE 783
Query: 556 DTSH-PQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFAL 614
D + ++ IY E+ + ++K G + + + HS K A+V+
Sbjct: 784 DVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNE------------NASFHSAKQAVVYGF 831
Query: 615 L-NTHESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSC 667
+ + E+P+ + KN +C DCH +++++V ++I +RD N+ H FK+G CSC
Sbjct: 832 IYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 209/456 (45%), Gaps = 44/456 (9%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
++H +I EN L L+ Y ARK+FDE+S R V + VMI ++ ++
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+ AL +F EM+ G P+ +T+ V+++C+ ++ +G ++HG+++K + N VG+
Sbjct: 104 EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGS 163
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
L +Y KCG EA + + D +SW M++ ++ +AL+ EM G P
Sbjct: 164 SLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPP 223
Query: 231 DAGTMASLMPAVT-------NTSSDNVLYVKDIFINLE-KKSLVS--------------- 267
+ T L+ A + T N++ V+ I +N+ K SLV
Sbjct: 224 NEFTFVKLLGASSFLGLEFGKTIHSNII-VRGIPLNVVLKTSLVDFYSQFSKMEDAVRVL 282
Query: 268 ----------WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
W +++ +++N A+ +L+M ++P+ T +++L C + +L
Sbjct: 283 NSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLD 342
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLE-DAQKVFDKMKFRDVASWTSLISAY 376
G++IH + + + N+L+DMY +C E +A +VF M +V SWT+LI
Sbjct: 343 FGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGL 402
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH----SGLLEEGKVYFKQMTDDYR 432
G + L EM + P+ + +L ACS +LE ++ D
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPN 468
+ LVD + +VD A++VI+ M N
Sbjct: 463 VVGN-----SLVDAYASSRKVDYAWNVIRSMKRRDN 493
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 176/381 (46%), Gaps = 38/381 (9%)
Query: 131 NYTYPCVLKACSC-SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
N C+ C S++ R GL +H ++K L NL + N L+S+Y K + AR +
Sbjct: 22 NLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLF 81
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM---------- 239
DEM R V +W M++ + ++ F AL + EM G P+ T +S++
Sbjct: 82 DEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDIS 141
Query: 240 ------PAVTNT---------SSDNVLYVK--------DIFINLEKKSLVSWNVMITVYM 276
+V T SS + LY K ++F +L+ +SW +MI+ +
Sbjct: 142 YGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLV 201
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
A+ Y +M K+ V P+ T +L A L L G+ IH + + + N++
Sbjct: 202 GARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVV 260
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
L+ SL+D Y++ +EDA +V + +DV WTS++S + + A+ F EM++ G
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVD-E 455
+ P++ + AILS CS L+ GK Q T + LVD+ + + E
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQIHSQ-TIKVGFEDSTDVGNALVDMYMKCSASEVE 379
Query: 456 AYDVIKQMPLEPNERVWGTLL 476
A V M + PN W TL+
Sbjct: 380 ASRVFGAM-VSPNVVSWTTLI 399
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 34/290 (11%)
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
+D + + +F + +++ +W VMI+ + K+ +A+ L+ +M S P+ T +SV
Sbjct: 71 TDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSV 130
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
+ +C L + G R+H V + N ++ +SL D+Y++CG ++A ++F ++ D
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT 190
Query: 367 ASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY--- 423
SWT +IS+ + AL +SEM +G+ P+ FV +L A S GL E GK
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSN 249
Query: 424 ----------------------FKQMTDDYRI-----TPRIEHFACLVDLLGRAGRVDEA 456
F +M D R+ + + +V R R EA
Sbjct: 250 IIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEA 309
Query: 457 YDV---IKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQS 503
++ + L+PN + +LS C ++D G +++ E S
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 9/180 (5%)
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
+C +L C S+ + G IH V + L NL L N+L+ +Y + + +A+K+FD+M
Sbjct: 26 SCIRILSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLE--- 418
R V +WT +ISA+ + + +AL+LF EM SG P+ F +++ +C +GL +
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRDISY 142
Query: 419 EGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
G+V+ + + + + L DL + G+ EA ++ + + W ++SS
Sbjct: 143 GGRVHGSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSLQ-NADTISWTMMISS 199
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 279/507 (55%), Gaps = 50/507 (9%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
AR VF+ I +V +N MIR Y N+ + AL+ ++EM+ G+ PD +T+P VLKACS
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
+++FG +HG ++K + N++V L+ MY CG + V +++P+ +VV+W S+
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM------------------------ 239
++G+ N RF DA+E REM G K + M L+
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239
Query: 240 -PAVTNTSSDNVLYVKDI----------------FINLEKKSLVSWNVMITVYMKNSMPG 282
P + NV+ + F + +++LVSWN +IT Y +N
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299
Query: 283 NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLI 342
A+ ++L M + PD +T SV+ A LG+ IH YV + + + +L+
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 343 DMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG-ISPDH 401
+MYA+ G E A+K F+ ++ +D +WT +I G G AL++F MQ G +PD
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
I ++ +L ACSH GL+EEG+ YF +M D + + P +EH+ C+VD+L RAGR +EA ++K
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 462 QMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQL--SPEQ--SGYYVLLSNIYAKAG 517
MP++PN +WG LL+ C ++ N+++ D + + PE+ SG YVLLSNIYAKAG
Sbjct: 480 TMPVKPNVNIWGALLNGCDIHENLEL----TDRIRSMVAEPEELGSGIYVLLSNIYAKAG 535
Query: 518 RWKEVTEVRSLMKRRRIRKTPGISNVE 544
RW +V +R MK +R+ K G S+VE
Sbjct: 536 RWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 176/382 (46%), Gaps = 44/382 (11%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA DI VH ++ N + L+ Y CGE +VF++I + NVV
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVV 174
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
+ +I +VNN ++DA+ FREM + G + + +L AC ++ G HG +
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 158 --------LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
+ ++ +N+ + LI MY KCG L ARY+ D MP R +VSWNS++ GY+Q
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQ 294
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPA----------------VTNTS------- 246
N ++AL + +M DLG PD T S++ A V+ T
Sbjct: 295 NGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAI 354
Query: 247 ----------SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSE 295
+ + K F +LEKK ++W V+I + A+ ++ +M EK
Sbjct: 355 VCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 296 VEPDAITCASVLPACGDLSALLLGRR-IHEYVERKKLRPNLLLENSLIDMYARCGCLEDA 354
PD IT VL AC + + G+R E + L P + ++D+ +R G E+A
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 355 QKVFDKMKFR-DVASWTSLISA 375
+++ M + +V W +L++
Sbjct: 475 ERLVKTMPVKPNVNIWGALLNG 496
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/577 (35%), Positives = 302/577 (52%), Gaps = 51/577 (8%)
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
S N F LH LK+ + F N L+ Y K + AR + DEM +VVSW S+
Sbjct: 42 STNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSV 101
Query: 204 VAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE- 261
++GY + +AL + ++M +D P+ T AS+ A + + + K+I LE
Sbjct: 102 ISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRI--GKNIHARLEI 159
Query: 262 ------------------------------------KKSLVSWNVMITVYMKNSMPGNAI 285
+++VSW MIT Y +N+ AI
Sbjct: 160 SGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 286 DLYLQMEKSEVEPDA--ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
+L+ + A ASV+ AC L L G+ H V R N ++ SL+D
Sbjct: 220 ELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLD 279
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
MYA+CG L A+K+F +++ V S+TS+I A G G A+ LF EM I+P+++
Sbjct: 280 MYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVT 339
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+ +L ACSHSGL+ EG Y M + Y + P H+ C+VD+LGR GRVDEAY++ K +
Sbjct: 340 LLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTI 399
Query: 464 PL--EPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKE 521
+ E +WG LLS+ R++ ++I A+ L+Q + + + Y+ LSN YA +G W++
Sbjct: 400 EVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWED 459
Query: 522 VTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGY 581
+R MKR K S +E V+ F AGD S +S EI L L +MKE G+
Sbjct: 460 SESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGH 519
Query: 582 ------VPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRITKNLRVCGDC 634
+ + S DV+EE K+ +++H E+LA+ + LL+ S IRI NLR+C DC
Sbjct: 520 RGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDC 579
Query: 635 HIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
H A KLIS+IV REIV+RD NRFH FK+G C+C DYW
Sbjct: 580 HEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 186/411 (45%), Gaps = 49/411 (11%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREM-VNGGFRP 129
L+ +Y E TARK+FDE+ E NVV + +I Y + +AL +F++M + P
Sbjct: 70 LVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPP 129
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
+ YT+ V KACS R G +H + L N+ V + L+ MYGKC + AR V
Sbjct: 130 NEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVF 189
Query: 190 DEMP--RRDVVSWNSMVAGYAQNMRFDDALEVCREMDD--LGQKPDAGTMASLMPAVTNT 245
D M R+VVSW SM+ YAQN R +A+E+ R + + + +AS++ A ++
Sbjct: 190 DSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSL 249
Query: 246 S------------------SDNV-------LYVK--------DIFINLEKKSLVSWNVMI 272
S+ V +Y K IF+ + S++S+ MI
Sbjct: 250 GRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMI 309
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG-RRIHEYVERKKL 331
K+ + A+ L+ +M + P+ +T VL AC + G + E+ +
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGV 369
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKF---RDVASWTSLISAYGMTGQGCNALAL 388
P+ ++DM R G +++A ++ ++ + W +L+SA + G+ + +
Sbjct: 370 VPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR----VEI 425
Query: 389 FSEMQNSGISPDH---IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
SE I + A++A+ +A + SG E+ + +M + R
Sbjct: 426 VSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKER 476
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 151/356 (42%), Gaps = 44/356 (12%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEI--SERNVVFYNVMIRSYV 107
KN+H +L N + L+ Y C + TAR+VFD + RNVV + MI +Y
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 108 NNRWYNDALLVFREMVNGGF---RPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
N ++A+ +FR N R + + V+ ACS L++G HG + + +
Sbjct: 211 QNARGHEAIELFRSF-NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
N V L+ MY KCG L A + + V+S+ SM+ A++ + A+++ EM
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNA 284
P+ T+ ++ A +++ N LE SL++
Sbjct: 330 AGRINPNYVTLLGVLHACSHSGLVNE--------GLEYLSLMA----------------- 364
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLS----ALLLGRRIHEYVERKKLRPNLLLENS 340
EK V PD+ V+ G A L + I E+ L LL S
Sbjct: 365 -------EKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALL--S 415
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
++ R + +A K + + +++ +L +AY ++G ++ +L EM+ SG
Sbjct: 416 AGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSG 471
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 297/548 (54%), Gaps = 36/548 (6%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+G L+ Y CG A ++FDE+ + ++V ++ M+ + N A+ FR MV
Sbjct: 98 VGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS 157
Query: 127 -FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
PD T ++ AC+ N R G +HG +++ +L + N L++ Y K EA
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA 217
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA---- 241
+ + +DV+SW++++A Y QN +AL V +M D G +P+ T+ ++ A
Sbjct: 218 VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAA 277
Query: 242 ---------------------VTNTSSDNVLYVK--------DIFINLEKKSLVSWNVMI 272
V +++ +Y+K +F + +K +VSW +I
Sbjct: 278 HDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALI 337
Query: 273 TVYMKNSMPGNAIDLY-LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
+ + N M +I+ + + + ++ PDAI VL +C +L L + H YV +
Sbjct: 338 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 397
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
N + SL+++Y+RCG L +A KVF+ + +D WTSLI+ YG+ G+G AL F+
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 392 M-QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA 450
M ++S + P+ + F++ILSACSH+GL+ EG FK M +DYR+ P +EH+A LVDLLGR
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRV 517
Query: 451 GRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLS 510
G +D A ++ K+MP P ++ GTLL +CR++ N ++ A L +L +GYY+L+S
Sbjct: 518 GDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMS 577
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELY 570
N+Y G W+ V ++R+ +K+R I+K S +E+ +VH F+A D HP+ + +Y L
Sbjct: 578 NVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLK 637
Query: 571 VLVGKMKE 578
L MKE
Sbjct: 638 ELDLHMKE 645
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 235/487 (48%), Gaps = 46/487 (9%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
AR++F E+++R++ +N +++S + + + L F M +PDN+T P LKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 144 SDNLRFGLQLHGAMLK-VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
+ +G +HG + K V L +L+VG+ LI MY KCG ++EA + DE+ + D+V+W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 203 MVAGYAQNMRFDDALEVCREM---DDLGQKPDAGTMASLMPAVTNTSSDNV--------- 250
MV+G+ +N A+E R M D+ PD T+ +L+ A T S+ +
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDV--TPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 251 ----------------LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
Y K ++F + +K ++SW+ +I Y++N A+
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYA 346
++ M EP+ T VL AC L GR+ HE RK L + + +L+DMY
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 347 RCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM-QNSGISPDHIAFV 405
+C E+A VF ++ +DV SW +LIS + + G ++ FS M + PD I V
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 406 AILSACSHSGLLEEGKVYFKQMTD-DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP 464
+L +CS G LE+ K + + + P I A LV+L R G + A V +
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASKVFNGIA 428
Query: 465 LEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYA--KAGRWKEV 522
L+ + VW +L++ ++ L +++++ S + LS + A AG E
Sbjct: 429 LK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEG 487
Query: 523 TEVRSLM 529
+ LM
Sbjct: 488 LRIFKLM 494
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 182/411 (44%), Gaps = 59/411 (14%)
Query: 8 NISKLQALVSSFQKSLASFQSPVIAVELLGK---ALDQYPDIIAL--------------- 49
+I ++VS F+K+ SP AVE + A D PD + L
Sbjct: 126 DIVTWSSMVSGFEKN----GSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 50 -KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
+ VH +I + SL L+ YA A +F I+E++V+ ++ +I YV
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
N +ALLVF +M++ G P+ T CVL+AC+ + +L G + H ++ L+ + V
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN-MRFDDALEVCREMDDLG 227
L+ MY KC EA V +PR+DVVSW ++++G+ N M E + +
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 228 QKPDAGTMASLMPAVTNT-------------------------SSDNVLYVK-------- 254
+PDA M ++ + + +S LY +
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK-SEVEPDAITCASVLPACGDL 313
+F + K V W +IT Y + A++ + M K SEV+P+ +T S+L AC
Sbjct: 422 KVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 481
Query: 314 SALLLGRRIHE-YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
+ G RI + V +L PNL L+D+ R G L+ A ++ +M F
Sbjct: 482 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPF 532
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/476 (36%), Positives = 276/476 (57%), Gaps = 6/476 (1%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
+H L+ + KL+ Y CG+ ARKVFDE+ +R++ VMI + N +
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
Y ++L FREM G + D + P +LKA + FG +H +LK + + F+ +
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSS 157
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
LI MY K G + AR V ++ +D+V +N+M++GYA N + D+AL + ++M LG KPD
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPD 217
Query: 232 AGTMASLMPAVTNTSSDNVLYVKDIF----INLEKKSLVSWNVMITVYMKNSMPGNAIDL 287
T +L+ ++ ++ V +I ++ K +VSW +I+ + N A D
Sbjct: 218 VITWNALISGFSHMRNEE--KVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDA 275
Query: 288 YLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR 347
+ QM + P++ T ++LPAC L+ + G+ IH Y L + + ++L+DMY +
Sbjct: 276 FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGK 335
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI 407
CG + +A +F K + ++ S+I Y G A+ LF +M+ +G DH+ F AI
Sbjct: 336 CGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAI 395
Query: 408 LSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEP 467
L+ACSH+GL + G+ F M + YRI PR+EH+AC+VDLLGRAG++ EAY++IK M +EP
Sbjct: 396 LTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEP 455
Query: 468 NERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVT 523
+ VWG LL++CR + NM++ +AA +L +L PE SG +LL+++YA AG W+ V
Sbjct: 456 DLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVV 511
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 295/527 (55%), Gaps = 58/527 (11%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
Y C A +VFDE+ R+ V +N +I ++ N + L +F M+ PD +T+
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
+LKAC+ +L +G+++H +++K + N VG LI MY KCG + EA + +
Sbjct: 487 GSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVK 254
R VS GTM L ++ K
Sbjct: 546 RANVS---------------------------------GTMEELEK----------MHNK 562
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
+ ++ VSWN +I+ Y+ +A L+ +M + + PD T A+VL C +L+
Sbjct: 563 RL-----QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
+ LG++IH V +K+L+ ++ + ++L+DMY++CG L D++ +F+K RD +W ++I
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
Y G+G A+ LF M I P+H+ F++IL AC+H GL+++G YF M DY +
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY-SNMDIGLLAAD 493
P++ H++ +VD+LG++G+V A ++I++MP E ++ +W TLL C ++ +N+++ A
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATA 797
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFL 553
LL+L P+ S Y LLSN+YA AG W++V+++R M+ +++K PG S VEL ++H FL
Sbjct: 798 ALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFL 857
Query: 554 AGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSAL---HDVEEEDK 597
GD +HP+ +EIYEEL ++ +MK P DS+ +VEEED+
Sbjct: 858 VGDKAHPRWEEIYEELGLIYSEMK-----PFDDSSFVRGVEVEEEDQ 899
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 208/453 (45%), Gaps = 65/453 (14%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
K++ Y+ + A F+ + R+VV +N M+ Y+ N ++ VF +M G
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEF 178
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D T+ +LK CS ++ G+Q+HG +++V D ++ + L+ MY K +E+ V
Sbjct: 179 DGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVF 238
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-- 247
+P ++ VSW++++AG QN AL+ +EM QK +AG S+ +V + +
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM----QKVNAGVSQSIYASVLRSCAAL 294
Query: 248 -----------------------------------DNVLYVKDIFINLEKKSLVSWNVMI 272
DN+ + +F N E + S+N MI
Sbjct: 295 SELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMI 354
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
T Y + A+ L+ ++ S + D I+ + V AC + L G +I+ + L
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM 392
++ + N+ IDMY +C L +A +VFD+M+ RD SW ++I+A+ G+G L LF M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 393 QNSGISPDHIAFVAILSACS----------HSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
S I PD F +IL AC+ HS +++ G M + +
Sbjct: 475 LRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSG------MASNSSVG------CS 522
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTL 475
L+D+ + G ++EA + + N V GT+
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRAN--VSGTM 553
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 235/541 (43%), Gaps = 90/541 (16%)
Query: 122 MVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM-LKVRLDWNLFVGNGLISMYGKCG 180
M+ GFRP + C+L+ + S + + M L+ + WN +I+ Y K
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN-----KMINGYSKSN 128
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
+ +A + MP RDVVSWNSM++GY QN ++EV +M G + D T A ++
Sbjct: 129 DMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILK 188
Query: 241 AVT---NTS---------------SDNV-------LYVKD--------IFINLEKKSLVS 267
+ +TS +D V +Y K +F + +K+ VS
Sbjct: 189 VCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 268 WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVE 327
W+ +I ++N++ A+ + +M+K ASVL +C LS L LG ++H +
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 328 RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALA 387
+ + ++ + +DMYA+C ++DAQ +FD + + S+ ++I+ Y G AL
Sbjct: 309 KSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALL 368
Query: 388 LFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFACLVDL 446
LF + +SG+ D I+ + AC+ L EG ++Y + + + + A +D+
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDM 426
Query: 447 LGRAGRVDEAYDVIKQM----------------------------------PLEPNERVW 472
G+ + EA+ V +M +EP+E +
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 473 GTLLSSCRVYSNMDIGLLAADNLLQLS-PEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR 531
G++L +C ++ G+ ++++ S L ++Y+K G +E ++ S +
Sbjct: 487 GSILKAC-TGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQ 545
Query: 532 R--------RIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVP 583
R + K E+ ++ ++G QS E+ +L +M E+G P
Sbjct: 546 RANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS----EDAQMLFTRMMEMGITP 601
Query: 584 E 584
+
Sbjct: 602 D 602
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 20/210 (9%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER-NV-------------- 96
+H+ ++ N S+G L+ Y+ CG A K+ +R NV
Sbjct: 504 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKR 563
Query: 97 -----VFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGL 151
V +N +I YV DA ++F M+ G PD +TY VL C+ + G
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 623
Query: 152 QLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNM 211
Q+H ++K L ++++ + L+ MY KCG L ++R + ++ RRD V+WN+M+ GYA +
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 683
Query: 212 RFDDALEVCREMDDLGQKPDAGTMASLMPA 241
+ ++A+++ M KP+ T S++ A
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRA 713
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 79/207 (38%), Gaps = 37/207 (17%)
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
V C AL LG++ H ++ RP + N L+ +Y A VFDKM RD
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 366 VASW-------------------------------TSLISAYGMTGQGCNALALFSEMQN 394
V SW S++S Y G+ ++ +F +M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA--CLVDLLGRAGR 452
GI D F IL CS LE+ + + R+ + A L+D+ + R
Sbjct: 174 EGIEFDGRTFAIILKVCS---FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 453 VDEAYDVIKQMPLEPNERVWGTLLSSC 479
E+ V + +P E N W +++ C
Sbjct: 231 FVESLRVFQGIP-EKNSVSWSAIIAGC 256
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H ++I + + L+ Y+ CG+ +R +F++ R+ V +N MI Y ++
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNLFV 168
+A+ +F M+ +P++ T+ +L+AC+ + GL+ M + LD L
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 742
Query: 169 GNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVA 205
+ ++ + GK G + A ++ EMP D V W +++
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 282/497 (56%), Gaps = 9/497 (1%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREM-VNGGFRP 129
++ Y G AR +FD ++ERNV+ + MI Y ++ D +F M G +
Sbjct: 214 MVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV 273
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
++ T + KAC R G Q+HG + ++ L+++LF+GN L+SMY K G + EA+ V
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDN 249
M +D VSWNS++ G Q + +A E L +K M S + S
Sbjct: 334 GVMKNKDSVSWNSLITGLVQRKQISEAYE-------LFEKMPGKDMVSWTDMIKGFSGKG 386
Query: 250 -VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLP 308
+ ++F + +K ++W MI+ ++ N A+ + +M + EV P++ T +SVL
Sbjct: 387 EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
A L+ L+ G +IH V + + +L ++NSL+ MY +CG DA K+F + ++ S
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
+ ++IS Y G G AL LFS +++SG P+ + F+A+LSAC H G ++ G YFK M
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG 488
Y I P +H+AC+VDLLGR+G +D+A ++I MP +P+ VWG+LLS+ + + +D+
Sbjct: 567 SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
Query: 489 LLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQ 548
LAA L++L P+ + YV+LS +Y+ G+ ++ + ++ K +RI+K PG S + L +
Sbjct: 627 ELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGE 686
Query: 549 VHTFLAGDTSHPQSKEI 565
VH FLAGD S +EI
Sbjct: 687 VHNFLAGDESQLNLEEI 703
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 148/337 (43%), Gaps = 56/337 (16%)
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
+F N IS + + G L EA + +M R +VSW +M++ YA+N + A +V D+
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQV---FDE 106
Query: 226 LGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAI 285
+ + A + + N Y ++F ++ +K+ VS+ MIT +++ A
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAY--ELFCDIPEKNAVSYATMITGFVRAGRFDEAE 164
Query: 286 DLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVE--RKKLRPNLLLENSLID 343
LY + + V+ ++VL LS L + +E V + ++ +S++
Sbjct: 165 FLYAE---TPVKFRDSVASNVL-----LSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVH 216
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG---ISPD 400
Y + G + DA+ +FD+M R+V +WT++I Y G + LF M+ G ++ +
Sbjct: 217 GYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSN 276
Query: 401 HIA--------FV-------------------------AILSACSHSGLLEEGKVYFKQM 427
+A FV +++S S G + E K F M
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVM 336
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP 464
+ ++ + L+ L + ++ EAY++ ++MP
Sbjct: 337 KNKDSVS-----WNSLITGLVQRKQISEAYELFEKMP 368
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 39 ALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVF 98
A D+I +H +++ +N + S+ L+ Y CG A K+F ISE N+V
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
YN MI Y N + AL +F + + G P+ T+ +L AC + G + +M
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM- 565
Query: 159 KVRLDWNLFVGNG----LISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRF 213
+ +N+ G ++ + G+ G L +A ++ MP + W S+++ ++R
Sbjct: 566 --KSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRV 623
Query: 214 DDALEVCREMDDLGQKPDAGT 234
D A +++ +L +PD+ T
Sbjct: 624 DLAELAAKKLIEL--EPDSAT 642
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
+ ++ ++E + NS I +AR G L++A+ +F +M R + SW ++ISAY
Sbjct: 33 ITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYA 92
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAIL-SACSHSGLLEEGKVY--FKQMTDDYRIT 434
G+ A +F EM + + A++ + C + GK Y F + + ++
Sbjct: 93 ENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKC------DLGKAYELFCDIPEKNAVS 146
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
+A ++ RAGR DEA + + P++ + V +L S
Sbjct: 147 -----YATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLS 185
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/611 (31%), Positives = 305/611 (49%), Gaps = 90/611 (14%)
Query: 2 KPPLSRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKN---VHTKL-I 57
K LS+ +S+L++L Q + +LL L Q D +LK +H L I
Sbjct: 24 KAELSQAVSRLESLTQ---------QGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 58 YLNSHENPSLGIKLMRAYAACGEP-------------------------------GTARK 86
N L L+ Y CG+P AR
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 87 VFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDN 146
VFD + ER+VV +N M+ Y + ++AL ++E G + + +++ +L AC S
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 147 LRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAG 206
L+ Q HG +L N+ + +I Y KCG + A+ DEM +D+ W ++++G
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 207 YAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLV 266
YA+ LG A + +F + +K+ V
Sbjct: 255 YAK----------------LGDMEAA---------------------EKLFCEMPEKNPV 277
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
SW +I Y++ A+DL+ +M V+P+ T +S L A +++L G+ IH Y+
Sbjct: 278 SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM 337
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVF----DKMKFRDVASWTSLISAYGMTGQG 382
R +RPN ++ +SLIDMY++ G LE +++VF DK D W ++ISA G G
Sbjct: 338 IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDK---HDCVFWNTMISALAQHGLG 394
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
AL + +M + P+ V IL+ACSHSGL+EEG +F+ MT + I P EH+AC
Sbjct: 395 HKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYAC 454
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ 502
L+DLLGRAG E I++MP EP++ +W +L CR++ N ++G AAD L++L PE
Sbjct: 455 LIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPES 514
Query: 503 SGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQS 562
S Y+LLS+IYA G+W+ V ++R +MK+RR+ K +S +E+ +V F D SH +
Sbjct: 515 SAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHA 574
Query: 563 KEIYEELYVLV 573
++ EE+Y ++
Sbjct: 575 RK--EEIYFIL 583
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/497 (33%), Positives = 276/497 (55%), Gaps = 40/497 (8%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
ARK+FD YN +I++Y + +++++++ + G RP ++T+ + A +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
+ R LH + + + F LI+ Y K G L AR V DEM +RDV WN+M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
+ GY + G M + M ++F ++ +K
Sbjct: 155 ITGYQRR----------------------GDMKAAM---------------ELFDSMPRK 177
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITCASVLPACGDLSALLLGRRI 322
++ SW +I+ + +N A+ ++L MEK + V+P+ IT SVLPAC +L L +GRR+
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM-KFRDVASWTSLISAYGMTGQ 381
Y N+ + N+ I+MY++CG ++ A+++F+++ R++ SW S+I + G+
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGK 297
Query: 382 GCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA 441
AL LF++M G PD + FV +L AC H G++ +G+ FK M + ++I+P++EH+
Sbjct: 298 HDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYG 357
Query: 442 CLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPE 501
C++DLLGR G++ EAYD+IK MP++P+ VWGTLL +C + N++I +A++ L +L P
Sbjct: 358 CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPT 417
Query: 502 QSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN-VELNSQVHTFLAGDTSHP 560
G V++SNIYA +W V +R LMK+ + K G S VE+ VH F D SHP
Sbjct: 418 NPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHP 477
Query: 561 QSKEIYEELYVLVGKMK 577
+S EIY+ L + +MK
Sbjct: 478 RSYEIYQVLEEIFRRMK 494
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSY-- 106
L+ +H++ + L+ AYA G AR+VFDE+S+R+V +N MI Y
Sbjct: 101 LRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 107 -----------------------------VNNRWYNDALLVFREM-VNGGFRPDNYTYPC 136
N Y++AL +F M + +P++ T
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP-RR 195
VL AC+ L G +L G + N++V N I MY KCG + A+ + +E+ +R
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQR 280
Query: 196 DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKD 255
++ SWNSM+ A + + D+AL + +M G+KPDA T L+ A + V+ ++
Sbjct: 281 NLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGM--VVKGQE 338
Query: 256 IFINLEKKSLVS-----WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
+F ++E+ +S + MI + + A DL M ++PDA+ ++L AC
Sbjct: 339 LFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLLGAC 395
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 33/281 (11%)
Query: 249 NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLP 308
N++Y + +F + + +N +I Y + P +I LY + + P T +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD--- 365
A S+ R +H R + +LI YA+ G L A++VFD+M RD
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV 150
Query: 366 ----------------------------VASWTSLISAYGMTGQGCNALALFSEMQ-NSG 396
V SWT++IS + G AL +F M+ +
Sbjct: 151 WNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
+ P+HI V++L AC++ G LE G+ + + I +++ + G +D A
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGR-RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ 497
+ +++ + N W +++ S + D L +L+
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLR 310
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 182/586 (31%), Positives = 308/586 (52%), Gaps = 40/586 (6%)
Query: 29 PVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVF 88
PV +E+L L+ I L+ +H + + ++ ++ Y C G A+ +F
Sbjct: 147 PVTLLEMLSGVLE----ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLF 202
Query: 89 DEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLR 148
D++ +R++V +N MI Y + ++ L + M G RPD T+ L +L
Sbjct: 203 DQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLE 262
Query: 149 FGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYA 208
G LH ++K D ++ + LI+MY KCG + VL+ +P +DVV W M++G
Sbjct: 263 MGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV------------------ 250
+ R + AL V EM G + +AS++ + S ++
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 251 -------LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQME-KS 294
+Y K IF + ++ LVSWN +I+ Y +N A+ L+ +M+ K+
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKT 442
Query: 295 EVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDA 354
+ D+ T S+L AC AL +G+ IH V R +RP L++ +L+DMY++CG LE A
Sbjct: 443 VQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAA 502
Query: 355 QKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHS 414
Q+ FD + ++DV SW LI+ YG G+G AL ++SE +SG+ P+H+ F+A+LS+CSH+
Sbjct: 503 QRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHN 562
Query: 415 GLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGT 474
G++++G F M D+ + P EH AC+VDLL RA R+++A+ K+ P+ V G
Sbjct: 563 GMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGI 622
Query: 475 LLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRI 534
+L +CR ++ + +++++L P +G+YV L + +A RW +V+E + M+ +
Sbjct: 623 ILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGL 682
Query: 535 RKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELG 580
+K PG S +E+N + TF TSH S + L +L +M + G
Sbjct: 683 KKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 224/497 (45%), Gaps = 41/497 (8%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
++H +++ + + L+ YA G ARKVF+E+ ER+VV + MI Y
Sbjct: 67 SIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAG 126
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+A + EM G +P T +L L+ LH + D ++ V N
Sbjct: 127 IVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMN 183
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
++++Y KC + +A+ + D+M +RD+VSWN+M++GYA + L++ M G +P
Sbjct: 184 SMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRP 243
Query: 231 D----------AGTMASLMPA------VTNTSSDNVLYVKDIFINL-------------- 260
D +GTM L + T D +++K I +
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 261 ---EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
K +V W VMI+ M+ A+ ++ +M +S + + ASV+ +C L +
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
LG +H YV R + NSLI MYA+CG L+ + +F++M RD+ SW ++IS Y
Sbjct: 364 LGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 378 MTGQGCNALALFSEMQNSGISP-DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
C AL LF EM+ + D V++L ACS +G L GK+ + + I P
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPC 482
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL 496
LVD+ + G ++ A + + + WG L++ + DI L L
Sbjct: 483 SLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 497 Q--LSPEQSGYYVLLSN 511
+ P + +LS+
Sbjct: 542 HSGMEPNHVIFLAVLSS 558
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 190/415 (45%), Gaps = 42/415 (10%)
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
++N I ++ + L F M+ PD +T+P +LKAC+ L FGL +H +
Sbjct: 13 YFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
L + ++ + L+++Y K G L AR V +EM RDVV W +M+ Y++ +A
Sbjct: 73 LVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEAC 132
Query: 218 EVCREMDDLGQKPDAGTMASLMPAVTNTSS------------------------------ 247
+ EM G KP T+ ++ V +
Sbjct: 133 SLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKC 192
Query: 248 DNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVL 307
D+V KD+F +E++ +VSWN MI+ Y + L +M + PD T + L
Sbjct: 193 DHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASL 252
Query: 308 PACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
G + L +GR +H + + ++ L+ +LI MY +CG E + +V + + +DV
Sbjct: 253 SVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVV 312
Query: 368 SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQ 426
WT +IS G+ AL +FSEM SG A +++++C+ G + G V+
Sbjct: 313 CWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYV 372
Query: 427 MTDDYRI-TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER---VWGTLLS 477
+ Y + TP + L+ + + G +D++ + ++M NER W ++S
Sbjct: 373 LRHGYTLDTPALNS---LITMYAKCGHLDKSLVIFERM----NERDLVSWNAIIS 420
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/513 (35%), Positives = 273/513 (53%), Gaps = 43/513 (8%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L++ Y G G A KVF + +V +NVMI Y + +AL ++ +MV+ G PD
Sbjct: 172 LVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPD 231
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW--NLFVGNGLISMYGKCGCLLEARYV 188
YT +L C ++R G +HG + + + NL + N L+ MY KC A+
Sbjct: 232 EYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA 291
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD 248
D M ++D+ SWN+MV G+ + LG A + MP
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVR----------------LGDMEAAQAVFDQMP-------- 327
Query: 249 NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAI-DLYLQMEKSE-VEPDAITCASV 306
K+ LVSWN ++ Y K + +L+ +M E V+PD +T S+
Sbjct: 328 -------------KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSL 374
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
+ + L GR +H V R +L+ + L ++LIDMY +CG +E A VF +DV
Sbjct: 375 ISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDV 434
Query: 367 ASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQ 426
A WTS+I+ G G AL LF MQ G++P+++ +A+L+ACSHSGL+EEG F
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH 494
Query: 427 MTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI-KQMPLEPNERVWGTLLSSCRVYSNM 485
M D + P EH+ LVDLL RAGRV+EA D++ K+MP+ P++ +WG++LS+CR ++
Sbjct: 495 MKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDI 554
Query: 486 DIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
+ LA LL+L PE+ G YVLLSNIYA GRW + R M+ R ++KT G S+V
Sbjct: 555 ETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVG 614
Query: 546 NSQVHTFLAGD-TSHPQSKEIYEELYVLVGKMK 577
+H F+A + +HP+ EI L L +MK
Sbjct: 615 VEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 231 DAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK-SLVSWNVMITVYMKNSMPGNAIDLYL 289
D M+ L+ T +N+ K +F+N ++ +N MI+ +S LY
Sbjct: 65 DTFPMSRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAV--SSSKNECFGLYS 122
Query: 290 QMEKSEVEPDAITCASVLPACGDLSALLLGRRIH-EYVERKKLRPNLLLENSLIDMYARC 348
M + V PD T ++ A LS + ++IH + L L NSL+ Y
Sbjct: 123 SMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMEL 179
Query: 349 GCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAIL 408
G A+KVF +M DV+S+ +I Y G AL L+ +M + GI PD +++L
Sbjct: 180 GNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLL 239
Query: 409 SACSHSGLLEEGK 421
C H + GK
Sbjct: 240 VCCGHLSDIRLGK 252
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 291/527 (55%), Gaps = 16/527 (3%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGT---ARKVFDEISERNVVFYNV 101
+I LK +H ++ N S+ +L+ + A+ PG A K+FDEI + +V N
Sbjct: 24 NIRTLKQIHASMVVNGLMSNLSVVGELIYS-ASLSVPGALKYAHKLFDEIPKPDVSICNH 82
Query: 102 MIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR 161
++R + + ++ EM G PD YT+ VLKACS + G HG +++
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 162 LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR 221
N +V N LI + CG L A + D+ + V+W+SM +GYA+ + D+A+ R
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM---R 199
Query: 222 EMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMP 281
D++ K + + D+ +++F +K +V+WN MI+ Y+ P
Sbjct: 200 LFDEMPYKDQVAWNVMITGCLKCKEMDSA---RELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV-ERKKLRPNLL---- 336
A+ ++ +M + PD +T S+L AC L L G+R+H Y+ E + ++
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ N+LIDMYA+CG ++ A +VF +K RD+++W +LI + ++ +F EMQ
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLK 375
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
+ P+ + F+ ++ ACSHSG ++EG+ YF M D Y I P I+H+ C+VD+LGRAG+++EA
Sbjct: 376 VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEA 435
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKA 516
+ ++ M +EPN VW TLL +C++Y N+++G A + LL + ++SG YVLLSNIYA
Sbjct: 436 FMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYAST 495
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSK 563
G+W V +VR + R++K G+S +E + +S P+S+
Sbjct: 496 GQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESR 542
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 308 bits (789), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 170/474 (35%), Positives = 261/474 (55%), Gaps = 47/474 (9%)
Query: 119 FREMVNGGFRPDNYTYPCVLKACS--CSDNLRFGLQLHGAMLKVRLDWN-LFVGNGLISM 175
F +M G P++ T+ +L C S + G LHG K+ LD N + VG +I M
Sbjct: 59 FSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM 118
Query: 176 YGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTM 235
Y K G +AR V D M ++ V+WN+M+ GY ++ GQ +A M
Sbjct: 119 YSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS----------------GQVDNAAKM 162
Query: 236 ASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
MP ++ L+SW MI ++K A+ + +M+ S
Sbjct: 163 FDKMP---------------------ERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
V+PD + + L AC +L AL G +H YV + + N+ + NSLID+Y RCGC+E A+
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 356 KVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
+VF M+ R V SW S+I + G +L F +MQ G PD + F L+ACSH G
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 416 LLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTL 475
L+EEG YF+ M DYRI+PRIEH+ CLVDL RAGR+++A +++ MP++PNE V G+L
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 476 LSSCRVYSNMDIGLLAADNLLQ----LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR 531
L++C SN ++ A+ L++ L+ + YV+LSN+YA G+W+ +++R MK
Sbjct: 382 LAAC---SNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKG 438
Query: 532 RRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPET 585
++K PG S++E++ +H F+AGD +H ++ I E L ++ ++ G V ET
Sbjct: 439 LGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 150/298 (50%), Gaps = 12/298 (4%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y G+ A K+FD++ ER+++ + MI +V + +ALL FREM G +PD
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPD 205
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
L AC+ L FGL +H +L N+ V N LI +Y +CGC+ AR V
Sbjct: 206 YVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFY 265
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SD 248
M +R VVSWNS++ G+A N ++L R+M + G KPDA T + A ++ +
Sbjct: 266 NMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEE 325
Query: 249 NVLYVKDIFINLEKKSLVS-WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVL 307
+ Y + + + + + ++ +Y + +A+ L M ++P+ + S+L
Sbjct: 326 GLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLL 382
Query: 308 PACGDL-SALLLGRRIHEYVE--RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
AC + + ++L R+ +++ K N ++ L +MYA G E A K+ KMK
Sbjct: 383 AACSNHGNNIVLAERLMKHLTDLNVKSHSNYVI---LSNMYAADGKWEGASKMRRKMK 437
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS--ALLLGR 320
++ VSW I + +N A + M + VEP+ IT ++L CGD + + LG
Sbjct: 34 ETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGD 93
Query: 321 RIHEYVER------------------------KKLR--------PNLLLENSLIDMYARC 348
+H Y + KK R N + N++ID Y R
Sbjct: 94 LLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRS 153
Query: 349 GCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAIL 408
G +++A K+FDKM RD+ SWT++I+ + G AL F EMQ SG+ PD++A +A L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 409 SACSHSGLLEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+AC++ G L G V+ ++ D++ R+ + L+DL R G V+ A V M
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFYNM 267
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
VH ++ + N + L+ Y CG AR+VF + +R VV +N +I + N
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGN 287
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
+++L+ FR+M GF+PD T+ L ACS + GL+ M
Sbjct: 288 AHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM-------------- 333
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
KC + R + + +V Y++ R +DAL++ + M KP+
Sbjct: 334 ------KCDYRISPR----------IEHYGCLVDLYSRAGRLEDALKLVQSMP---MKPN 374
Query: 232 AGTMASLMPAVTNTSSDNVL 251
+ SL+ A +N ++ VL
Sbjct: 375 EVVIGSLLAACSNHGNNIVL 394
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 289/548 (52%), Gaps = 36/548 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV-NGGFRP 129
L+ YA CG+ A K+FDE+ R+V+ N++ ++ NR ++ + M+ +GGF
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-- 153
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D+ T VL C + +H + D + VGN LI+ Y KCGC + R V
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT---- 245
D M R+V++ ++++G +N +D L + M P++ T S + A + +
Sbjct: 214 DGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273
Query: 246 ---------------------SSDNVLYVK--------DIFINLEKKSLVSWNVMITVYM 276
S+ +Y K IF + + VS V++
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
+N AI +++M ++ VE DA ++VL ++L LG+++H V ++K N
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ N LI+MY++CG L D+Q VF +M R+ SW S+I+A+ G G AL L+ EM
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
+ P + F+++L ACSH GL+++G+ +M + + I PR EH+ C++D+LGRAG + EA
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEA 513
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKA 516
I +PL+P+ ++W LL +C + + ++G AA+ L Q +P+ S ++L++NIY+
Sbjct: 514 KSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSR 573
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKM 576
G+WKE + MK + K GIS++E+ + H+F+ D HPQ++ IY+ L L M
Sbjct: 574 GKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVM 633
Query: 577 KELGYVPE 584
+ GY P+
Sbjct: 634 VDEGYRPD 641
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 166/369 (44%), Gaps = 35/369 (9%)
Query: 47 IALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSY 106
+ K +H I + S+G KL+ +Y CG + R VFD +S RNV+ +I
Sbjct: 172 LVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGL 231
Query: 107 VNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL 166
+ N + D L +F M G P++ TY L ACS S + G Q+H + K ++ L
Sbjct: 232 IENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESEL 291
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
+ + L+ MY KCG + +A + + D VS ++ G AQN ++A++ M
Sbjct: 292 CIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA 351
Query: 227 GQKPDAGTMASLMPA----------------------VTNTSSDNVL---YVK------- 254
G + DA +++++ NT +N L Y K
Sbjct: 352 GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 255 -DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+F + K++ VSWN MI + ++ A+ LY +M EV+P +T S+L AC +
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHV 471
Query: 314 SALLLGRR-IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTS 371
+ GR ++E E + P +IDM R G L++A+ D + + D W +
Sbjct: 472 GLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQA 531
Query: 372 LISAYGMTG 380
L+ A G
Sbjct: 532 LLGACSFHG 540
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 154/345 (44%), Gaps = 34/345 (9%)
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
L V N L+S+Y KCG L++A + DEMP RDV+S N + G+ +N + + + M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 226 LG--------------QKPDAGTMASLMPAVT-------NTSSDNVLYV----------- 253
G P+ + ++ A+ S N L
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 254 KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+ +F + +++++ +I+ ++N + + + L+ M + V P+++T S L AC
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
++ G++IH + + + L +E++L+DMY++CG +EDA +F+ D S T ++
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVIL 329
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
G A+ F M +G+ D A+L L GK + +
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGK-QLHSLVIKRKF 388
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
+ L+++ + G + ++ V ++MP + N W +++++
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAA 432
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
R L++ NSL+ +YA+CG L DA K+FD+M RDV S + + + + L
Sbjct: 87 RNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 392 MQNSGISPDHIAFVAILSAC 411
M SG DH +LS C
Sbjct: 147 MLGSG-GFDHATLTIVLSVC 165
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/505 (31%), Positives = 270/505 (53%), Gaps = 9/505 (1%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A ++ E NV YN + + +V +L ++ M+ P +YTY ++KA S
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF 883
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
+ RFG L + K +++ + LI Y G + EAR V DEMP RD ++W +M
Sbjct: 884 AS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 941
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
V+ Y + + D A + +M + + + M N+ + +F + K
Sbjct: 942 VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGL------GNLEQAESLFNQMPVK 995
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
++SW MI Y +N AI ++ +M + + PD +T ++V+ AC L L +G+ +H
Sbjct: 996 DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVH 1055
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
Y + ++ + ++L+DMY++CG LE A VF + +++ W S+I G
Sbjct: 1056 MYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ 1115
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACL 443
AL +F++M+ + P+ + FV++ +AC+H+GL++EG+ ++ M DDY I +EH+ +
Sbjct: 1116 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGM 1175
Query: 444 VDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQS 503
V L +AG + EA ++I M EPN +WG LL CR++ N+ I +A + L+ L P S
Sbjct: 1176 VHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNS 1235
Query: 504 GYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKT-PGISNVELNSQVHTFLAGDTSHPQS 562
GYY LL ++YA+ RW++V E+R M+ I K PG S++ ++ + H F A D SH S
Sbjct: 1236 GYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSAS 1295
Query: 563 KEIYEELYVLVGKMKELGYVPETDS 587
E+ L + +M GYV ET++
Sbjct: 1296 DEVCLLLDEIYDQMGLAGYVQETEN 1320
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 156/316 (49%), Gaps = 29/316 (9%)
Query: 61 SHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR 120
S +N + L+ Y G A +F+++ ++++ + MI+ Y N+ Y +A+ VF
Sbjct: 962 SEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 1021
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
+M+ G PD T V+ AC+ L G ++H L+ ++++G+ L+ MY KCG
Sbjct: 1022 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 1081
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
L A V +P++++ WNS++ G A + +AL++ +M+ KP+A T S+
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 241 AVTNTSSDNVLYVKDIFINL-EKKSLVS----WNVMITVYMKNSMPGNAIDLYLQMEKSE 295
A T+ V + I+ ++ + S+VS + M+ ++ K + A++L M E
Sbjct: 1142 ACTHAGL--VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---E 1196
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN--LLLE--NS-----LIDMYA 346
EP+A+ ++L C RIH+ + ++ N ++LE NS L+ MYA
Sbjct: 1197 FEPNAVIWGALLDGC----------RIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYA 1246
Query: 347 RCGCLEDAQKVFDKMK 362
D ++ +M+
Sbjct: 1247 EQNRWRDVAEIRGRMR 1262
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/491 (31%), Positives = 267/491 (54%), Gaps = 45/491 (9%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNR--WYNDALLVFREMVNGGF-RPDNYTYPCVLKA 140
AR +FD S N Y ++ +Y ++ + A FR MVN RP+++ YP VLK+
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKS 135
Query: 141 CSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGK-CGCLLEARYVLDEMPRRDVVS 199
+ +H + K + V L+ Y + AR + DEM R+VVS
Sbjct: 136 TPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVS 195
Query: 200 WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFIN 259
W +M++GYA++ +A+ +F +
Sbjct: 196 WTAMLSGYARSGDISNAVA-------------------------------------LFED 218
Query: 260 LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCASVLPACGDLSALLL 318
+ ++ + SWN ++ +N + A+ L+ +M + + P+ +T VL AC L L
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 319 GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGM 378
+ IH + R+ L ++ + NSL+D+Y +CG LE+A VF + + +W S+I+ + +
Sbjct: 279 AKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 379 TGQGCNALALFSEMQN---SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
G+ A+A+F EM + I PDHI F+ +L+AC+H GL+ +G+ YF MT+ + I P
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEP 398
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
RIEH+ CL+DLLGRAGR DEA +V+ M ++ +E +WG+LL++C+++ ++D+ +A NL
Sbjct: 399 RIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNL 458
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
+ L+P GY +++N+Y + G W+E R ++K + K PG S +E++++VH F +
Sbjct: 459 VALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSL 518
Query: 556 DTSHPQSKEIY 566
D SHP+++EIY
Sbjct: 519 DKSHPETEEIY 529
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRP 129
++ YA G+ A +F+++ ER+V +N ++ + N + +A+ +FR M+N RP
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRP 258
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
+ T CVL AC+ + L+ +H + L ++FV N L+ +YGKCG L EA V
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG---QKPDAGTMASLMPAVTN 244
++ + +WNSM+ +A + R ++A+ V EM L KPD T L+ A T+
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTH 376
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 151/364 (41%), Gaps = 86/364 (23%)
Query: 249 NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY----LQMEKSEVEPDAITCA 304
N+ Y + IF + + ++T Y +S+P +A + L + +S P+
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYP 130
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR-CGCLEDAQKVFDKMKF 363
VL + LS+ +H ++ + ++++ +L+ YA + A+++FD+M
Sbjct: 131 LVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE 190
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
R+V SWT+++S Y +G NA+ALF +M + ++ AIL+AC+ +GL E
Sbjct: 191 RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP----SWNAILAACTQNGLFLEAVSL 246
Query: 424 FKQMTDDYRITPR----------------------IEHFA-------------CLVDLLG 448
F++M ++ I P I FA LVDL G
Sbjct: 247 FRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 449 RAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMD---------------------- 486
+ G ++EA V K M + + W ++++ ++ +
Sbjct: 307 KCGNLEEASSVFK-MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHI 365
Query: 487 --IGLLAADNLLQLSPEQSGYYVLLSN----------------IYAKAGRWKEVTEVRSL 528
IGLL A L + GY+ L++N + +AGR+ E EV S
Sbjct: 366 TFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMST 425
Query: 529 MKRR 532
MK +
Sbjct: 426 MKMK 429
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 163/472 (34%), Positives = 267/472 (56%), Gaps = 10/472 (2%)
Query: 70 KLMRAYAACGEPGT---ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
KL+ A EP T A + + I N +N +IR+Y N+ AL VFREM+ G
Sbjct: 76 KLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP 135
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
PD Y++ VLKAC+ G Q+HG +K L ++FV N L+++YG+ G AR
Sbjct: 136 VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIAR 195
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS 246
VLD MP RD VSWNS+++ Y + D+A + EM++ + ++ A
Sbjct: 196 KVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGL--- 252
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCAS 305
V K++F ++ + +VSWN M+T Y ++++ +M + S +PD T S
Sbjct: 253 ---VKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVS 309
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
VL AC L +L G +H Y+++ + L +L+DMY++CG ++ A +VF RD
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRD 369
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFK 425
V++W S+IS + G G +AL +FSEM G P+ I F+ +LSAC+H G+L++ + F+
Sbjct: 370 VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE 429
Query: 426 QMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM 485
M+ YR+ P IEH+ C+VDLLGR G+++EA +++ ++P + + +LL +C+ + +
Sbjct: 430 MMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQL 489
Query: 486 DIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKT 537
+ A+ LL+L+ S Y +SN+YA GRW++V + R M+ R+ ++
Sbjct: 490 EQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 296/566 (52%), Gaps = 64/566 (11%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ HT++I + EN + +L+ Y G G A +F E+ RN + +NVMI+ +
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVL------------------------------- 138
A+ +F M F+PD T+ VL
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 139 ----KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
C+ + L ++HG ++K + L N LI +YGK G + +A ++ ++
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVK 254
+ + SWNS++ + + D+AL + E+++ M V N
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEE-------------MNHVCNV--------- 395
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
K ++V+W +I ++++ + QM+ S+V +++T +L C +L
Sbjct: 396 -------KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
AL LGR IH +V R + N+L++N+L++MYA+CG L + VF+ ++ +D+ SW S+I
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
YGM G AL++F M +SG PD IA VA+LSACSH+GL+E+G+ F M+ + +
Sbjct: 509 GYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLE 568
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
P+ EH+AC+VDLLGR G + EA +++K MP+EP V G LL+SCR++ N+DI A
Sbjct: 569 PQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQ 628
Query: 495 LLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLA 554
L L PE++G Y+LLSNIY+ GRW+E VR+L K++ ++K G S +E+ + + F +
Sbjct: 629 LSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSS 688
Query: 555 GDTSHPQSKEIYEELYVLVGKMKELG 580
G + + IY L LV M + G
Sbjct: 689 GSIVQSEFETIYPVLEDLVSHMLKKG 714
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 206/437 (47%), Gaps = 54/437 (12%)
Query: 1 MKPPLSRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLN 60
+ P + ++S +L S+ +SL + ++ + L + Q VH +++ +
Sbjct: 33 ISSPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQ---------VHAQVLLSD 83
Query: 61 S-HENPSLGIKLMRAYAACGEPGTARKVFDEISE---RNVVFYNVMIRSYVNNRWYNDAL 116
+ SL L+ YA G AR VF+ +S ++ +N ++++ V++ Y +AL
Sbjct: 84 FIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENAL 143
Query: 117 LVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGL--QLHGAMLKVRLDWNLFVGNGLIS 174
++R M G D Y P +L+AC RFGL H ++++ L NL V N L++
Sbjct: 144 ELYRGMRQRGLTGDGYILPLILRACRYLG--RFGLCRAFHTQVIQIGLKENLHVVNELLT 201
Query: 175 MYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGT 234
+Y K G + +A + EMP R+ +SWN M+ G++Q + A+++ M KPD T
Sbjct: 202 LYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVT 261
Query: 235 MASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKS 294
S++ + +D+ + + M GNA
Sbjct: 262 WTSVLSCHSQCGK-----FEDV---------------LKYFHLMRMSGNA---------- 291
Query: 295 EVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDA 354
V +A+ A C +L AL + ++H YV + L N+LI +Y + G ++DA
Sbjct: 292 -VSGEAL--AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDA 348
Query: 355 QKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN----SGISPDHIAFVAILSA 410
+ +F +++ + + SW SLI+++ G+ AL+LFSE++ + + + + +++
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG 408
Query: 411 CSHSGLLEEGKVYFKQM 427
C+ G ++ YF+QM
Sbjct: 409 CNVQGRGDDSLEYFRQM 425
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 122/268 (45%), Gaps = 21/268 (7%)
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKF---RDVASWTSLISAYGMTGQGCNALALFSEMQ 393
L +LI +YAR G L DA+ VF+ + D+ W S++ A G NAL L+ M+
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 394 NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
G++ D IL AC + G + + Q+ + + L+ L +AGR+
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI-QIGLKENLHVVNELLTLYPKAGRM 209
Query: 454 DEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMD--IGLLAADNLLQLSPEQSGYYVLLSN 511
+AY++ +MP+ N W ++ + + + + + P++ + +LS
Sbjct: 210 GDAYNLFVEMPVR-NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS- 267
Query: 512 IYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL-- 569
+++ G++++V + LM+ +S ++ + + ++ I E++
Sbjct: 268 CHSQCGKFEDVLKYFHLMR---------MSGNAVSGEALAVFFSVCAELEALSIAEKVHG 318
Query: 570 YVLVGKMKELGYVPETDSALHDVEEEDK 597
YV+ G +E Y+P ++ +H ++ K
Sbjct: 319 YVIKGGFEE--YLPSRNALIHVYGKQGK 344
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/583 (30%), Positives = 306/583 (52%), Gaps = 43/583 (7%)
Query: 36 LGKALDQYPDIIALKNVHTKLI---YLNSHENPSLGIKLMRAYAACGEPGTARKVFDEIS 92
L LD + LK +H L+ + + L L R A + AR++ ++
Sbjct: 4 LKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQ 63
Query: 93 ERNVVFYNVMIRSYVNNRWYNDAL--LVFREMVNGGFRPDNYTYPCVLKAC-SCSDNLRF 149
++ ++ +I + N L L +R M G P +T+P +LKA D+ F
Sbjct: 64 TLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF 123
Query: 150 GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
Q H ++K LD + FV N LIS Y G A + D +DVV+W +M+ G+ +
Sbjct: 124 --QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS------SDNVLYVK------DIF 257
N +A+ EM G + T+ S++ A S + LY++ D+F
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 258 IN----------------------LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
I + +++V+W +I Y+++ + ++ +M KS+
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSD 301
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
V P+ T +SVL AC + AL GRR+H Y+ + + N +LID+Y +CGCLE+A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAI 361
Query: 356 KVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
VF+++ ++V +WT++I+ + G +A LF M +S +SP+ + F+A+LSAC+H G
Sbjct: 362 LVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGG 421
Query: 416 LLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTL 475
L+EEG+ F M + + P+ +H+AC+VDL GR G ++EA +I++MP+EP VWG L
Sbjct: 422 LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Query: 476 LSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIR 535
SC ++ + ++G AA +++L P SG Y LL+N+Y+++ W EV VR MK +++
Sbjct: 482 FGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVV 541
Query: 536 KTPGISNVELNSQVHTFLAGDTSHP-QSKEIYEELYVLVGKMK 577
K+PG S +E+ ++ F+A D P +S ++Y+ L + +M+
Sbjct: 542 KSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 148/312 (47%), Gaps = 15/312 (4%)
Query: 7 RNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHE--- 63
RN S +A+V + + + V + KA + D+ ++VH +YL +
Sbjct: 181 RNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHG--LYLETGRVKC 238
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
+ +G L+ Y C A+KVFDE+ RNVV + +I YV +R ++ +LVF EM+
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
P+ T VL AC+ L G ++H M+K ++ N G LI +Y KCGCL
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA-- 241
EA V + + ++V +W +M+ G+A + DA ++ M P+ T +++ A
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 242 ---VTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP 298
+ L +K F N+E K+ + M+ ++ + + A L +E+ +EP
Sbjct: 419 HGGLVEEGRRLFLSMKGRF-NMEPKA-DHYACMVDLFGRKGLLEEAKAL---IERMPMEP 473
Query: 299 DAITCASVLPAC 310
+ ++ +C
Sbjct: 474 TNVVWGALFGSC 485
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 159/388 (40%), Gaps = 32/388 (8%)
Query: 245 TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDL--YLQMEKSEVEPDAIT 302
T++ Y + + L+ S+ W+ +I + + Y M ++ V P T
Sbjct: 47 TAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHT 106
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
+L A L + H ++ + L + + NSLI Y+ G + A ++FD +
Sbjct: 107 FPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAE 165
Query: 363 FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKV 422
+DV +WT++I + G A+ F EM+ +G++ + + V++L A + G+
Sbjct: 166 DKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRS 225
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
+ R+ + + LVD+ G+ D+A V +MP N W L++
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP-SRNVVTWTALIAGYVQS 284
Query: 483 SNMDIGLLAADNLLQ--LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGI 540
D G+L + +L+ ++P + +LS V +L + RR+
Sbjct: 285 RCFDKGMLVFEEMLKSDVAPNEKTLSSVLS----------ACAHVGALHRGRRVHCYMIK 334
Query: 541 SNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGH 600
+++E+N+ T L +LYV G ++E V E +
Sbjct: 335 NSIEINTTAGTTLI-------------DLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 601 LAVHS---EKLAIVFALLNTHESPIRIT 625
A H + + + +L++H SP +T
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVT 409
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 277/540 (51%), Gaps = 41/540 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y+ CG+ A +FD ER+ V +N +I YV + L + +M G
Sbjct: 189 LIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLT 248
Query: 131 NYTYPCVLKACSCSDNLRF---GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARY 187
Y VLKAC + N F G+ +H K+ +++++ V L+ MY K G L EA
Sbjct: 249 TYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIK 308
Query: 188 VLDEMPRRDVVSWNSMVAGYAQNMRFDD-----ALEVCREMDDLGQKPDAGTMASLMPAV 242
+ MP ++VV++N+M++G+ Q D A ++ +M G +P T + ++ A
Sbjct: 309 LFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKAC 368
Query: 243 T------------------NTSSDNV-------LYV--------KDIFINLEKKSLVSWN 269
+ N SD LY F + K+ + SW
Sbjct: 369 SAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWT 428
Query: 270 VMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
MI +++N +A DL+ Q+ S + P+ T + ++ AC D +AL G +I Y +
Sbjct: 429 SMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKS 488
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
+ ++ S I MYA+ G + A +VF +++ DVA+++++IS+ G AL +F
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
M+ GI P+ AF+ +L AC H GL+ +G YF+ M +DYRI P +HF CLVDLLGR
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGR 608
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
GR+ +A ++I + + W LLSSCRVY + IG A+ L++L PE SG YVLL
Sbjct: 609 TGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 668
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEEL 569
NIY +G EVR LM+ R ++K P +S + + +Q H+F D SHP S+ IY L
Sbjct: 669 HNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 214/481 (44%), Gaps = 75/481 (15%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
Y C E G AR++FD + ERN++ +N +I Y +Y A+ +F E + D +TY
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
L C +L G LHG ++ L +F+ N LI MY KCG L +A + D
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV---- 250
RD VSWNS+++GY + ++ L + +M G + S++ A ++
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 251 ------------------------LYVKD--------IFINLEKKSLVSWNVMITVYMK- 277
+Y K+ +F + K++V++N MI+ +++
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 278 ----NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP 333
+ A L++ M++ +EP T + VL AC L GR+IH + + +
Sbjct: 332 DEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS 391
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ 393
+ + ++LI++YA G ED + F +D+ASWTS+I + Q +A LF ++
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 394 NSGISPDHIAFVAILSACSHSGLLEEGK-----------------------VYFKQ---- 426
+S I P+ ++SAC+ L G+ +Y K
Sbjct: 452 SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMP 511
Query: 427 MTDDYRI---TPRIEHFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVW-GTLLSSC 479
+ + I P + ++ ++ L + G +EA ++ + M ++PN++ + G L++ C
Sbjct: 512 LANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Query: 480 R 480
Sbjct: 572 H 572
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 220/514 (42%), Gaps = 97/514 (18%)
Query: 104 RSYVNNRWYNDALLVFREMVNGGFR-------PDNYT-----YPCVLKACSCSDNLRFGL 151
+++ NN + + + + V G+R P N Y + + + S ++ G
Sbjct: 8 KTFFNNIAQDSLVTLITKRVGLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGK 67
Query: 152 QLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNM 211
HG M+K L+ L++ N L++MY KC L AR + D MP R+++S+NS+++GY Q
Sbjct: 68 LAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMG 127
Query: 212 RFDDALEVCREMDDLGQKPDAGTMASLMP-----------------AVTNTSSDNVLYVK 254
++ A+E+ E + K D T A + V N S V +
Sbjct: 128 FYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLIN 187
Query: 255 ----------------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP 298
+F +++ VSWN +I+ Y++ ++L +M + +
Sbjct: 188 VLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNL 247
Query: 299 DAITCASVLPACG-DLSALLL--GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
SVL AC +L+ + G IH Y + + ++++ +L+DMYA+ G L++A
Sbjct: 248 TTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAI 307
Query: 356 KVFDKMKFRDVASWTSLISAYGMTGQ-----GCNALALFSEMQNSGISPDHIAFVAILSA 410
K+F M ++V ++ ++IS + + A LF +MQ G+ P F +L A
Sbjct: 308 KLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKA 367
Query: 411 CSHSGLLEEGKVYFKQM------TDDYRITPRIEHFA----------------------- 441
CS + LE G+ + +D++ + IE +A
Sbjct: 368 CSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASW 427
Query: 442 -CLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ 497
++D + +++ A+D+ +Q+ + P E ++S+C D L++ +Q
Sbjct: 428 TSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA-----DFAALSSGEQIQ 482
Query: 498 LSPEQSGYYVLLS------NIYAKAGRWKEVTEV 525
+SG S ++YAK+G +V
Sbjct: 483 GYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 42/398 (10%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+ + +F + +++++S+N +I+ Y + A++L+L+ ++ ++ D T A L CG
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
+ L LG +H V L + L N LIDMY++CG L+ A +FD+ RD SW S
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACS---HSGLLEEG---KVYFK 425
LIS Y G L L ++M G++ A ++L AC + G +E+G Y
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 426 QMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM 485
++ ++ I R L+D+ + G + EA IK L P++ V Y+ M
Sbjct: 280 KLGMEFDIVVR----TALLDMYAKNGSLKEA---IKLFSLMPSKNVV--------TYNAM 324
Query: 486 DIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
G L D +++ E S L + G + ++K KT +E
Sbjct: 325 ISGFLQMD---EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKT-----LEY 376
Query: 546 NSQVHTFLAGDTSHPQSKEIYE----ELYVLVGKMKELGYVPETDSALHDVEEEDKEGHL 601
Q+H + + + QS E ELY L+G ++ G ++ D+
Sbjct: 377 GRQIHALICKN--NFQSDEFIGSALIELYALMGSTED-GMQCFASTSKQDIASWTSMIDC 433
Query: 602 AVHSEKLAIVF----ALLNTHESPIRITKNLRV--CGD 633
V +E+L F L ++H P T +L + C D
Sbjct: 434 HVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACAD 471
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 169/391 (43%), Gaps = 42/391 (10%)
Query: 6 SRNISKLQALVSSFQK-----SLASFQSPVIAVELLGKALDQYPDIIAL----------- 49
S+N+ A++S F + AS ++ + +++ + L+ P ++
Sbjct: 315 SKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTL 374
Query: 50 ---KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSY 106
+ +H + N + +G L+ YA G + F S++++ + MI +
Sbjct: 375 EYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCH 434
Query: 107 VNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL 166
V N A +FR++ + RP+ YT ++ AC+ L G Q+ G +K +D
Sbjct: 435 VQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFT 494
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
V ISMY K G + A V E+ DV ++++M++ AQ+ ++AL + M
Sbjct: 495 SVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTH 554
Query: 227 GQKPDAGTMASLMPAVTNTS--SDNVLYVK----DIFINLEKKSLVSWNVMITVYMKNSM 280
G KP+ ++ A + + + Y + D IN +K + ++ + +
Sbjct: 555 GIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEK---HFTCLVDLLGRTGR 611
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN-----L 335
+A +L L S + +T ++L +C ++G+R+ E + +L P +
Sbjct: 612 LSDAENLIL---SSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERL--MELEPEASGSYV 666
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
LL N +Y G A++V + M+ R V
Sbjct: 667 LLHN----IYNDSGVNSSAEEVRELMRDRGV 693
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 265/482 (54%), Gaps = 39/482 (8%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
YN ++ SY + ++ V+ GF PD +T+P V KAC +R G Q+HG +
Sbjct: 74 YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVT 133
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
K+ +++V N L+ YG CG A V EMP RDVVSW ++ G+ + + +AL+
Sbjct: 134 KMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALD 193
Query: 219 VCREMDDLGQKPDAGTMASLM----------------------PAVTNTSSDNVL---YV 253
+MD +P+ T ++ ++ + + N L YV
Sbjct: 194 TFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYV 250
Query: 254 K--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITCA 304
K +F LEKK VSWN MI+ + AIDL+ M+ S ++PD
Sbjct: 251 KCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT 310
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
SVL AC L A+ GR +HEY+ ++ + + +++DMYA+CG +E A ++F+ ++ +
Sbjct: 311 SVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSK 370
Query: 365 DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYF 424
+V +W +L+ + G G +L F EM G P+ + F+A L+AC H+GL++EG+ YF
Sbjct: 371 NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYF 430
Query: 425 KQM-TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYS 483
+M + +Y + P++EH+ C++DLL RAG +DEA +++K MP++P+ R+ G +LS+C+
Sbjct: 431 HKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRG 490
Query: 484 N-MDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN 542
M++ D+ L + E SG YVLLSNI+A RW +V +R LMK + I K PG S
Sbjct: 491 TLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSY 550
Query: 543 VE 544
+E
Sbjct: 551 IE 552
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 167/375 (44%), Gaps = 40/375 (10%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA ++ I K +H + + +++ + L+ Y CGE A KVF E+ R+VV
Sbjct: 114 KACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVV 173
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
+ +I + Y +AL F +M P+ TY CVL + L G +HG +
Sbjct: 174 SWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLI 230
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
LK +L GN LI MY KC L +A V E+ ++D VSWNSM++G R +A+
Sbjct: 231 LKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAI 290
Query: 218 EVCREMD-DLGQKPDAGTMASLMPAVTNTSSDNV-------------------------L 251
++ M G KPD + S++ A + + + +
Sbjct: 291 DLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDM 350
Query: 252 YVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
Y K +IF + K++ +WN ++ + ++ + +M K +P+ +T
Sbjct: 351 YAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTF 410
Query: 304 ASVLPACGDLSALLLGRR-IHEYVERK-KLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
+ L AC + GRR H+ R+ L P L +ID+ R G L++A ++ M
Sbjct: 411 LAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAM 470
Query: 362 KFR-DVASWTSLISA 375
+ DV +++SA
Sbjct: 471 PVKPDVRICGAILSA 485
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 38/306 (12%)
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
S S+N +++ Y P I Y + PD T V ACG S + G++IH
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
V + ++ ++NSL+ Y CG +A KVF +M RDV SWT +I+ + TG
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK---------------------- 421
AL FS+M + P+ +V +L + G L GK
Sbjct: 190 EALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 422 -VYFK--QMTDDYRITPRIEH-----FACLVDLLGRAGRVDEAYDVIKQMP----LEPNE 469
+Y K Q++D R+ +E + ++ L R EA D+ M ++P+
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 470 RVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYY-VLLSNIYAKAGRWKEVTEVRSL 528
+ ++LS+C +D G + +L + + + ++YAK G + E+ +
Sbjct: 307 HILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 529 MKRRRI 534
++ + +
Sbjct: 367 IRSKNV 372
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/512 (34%), Positives = 272/512 (53%), Gaps = 38/512 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRP 129
L+ YA CGE A KVFDE+ +R++V +N MI + + D + +F +M G P
Sbjct: 144 LVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSP 203
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
+ T + A + LR G +HG ++ +L V G++ +Y K C++ AR V
Sbjct: 204 NLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVF 263
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEV------------------------CREMDD 225
D +++ V+W++M+ GY +N +A EV C D
Sbjct: 264 DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGD 323
Query: 226 LGQKPDAGTMASLMPAVTNTSSDNVL---YVK-----DIFINLEK---KSLVSWNVMITV 274
L A + + + N + Y K D F + K ++S+N +IT
Sbjct: 324 LSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITG 383
Query: 275 YMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN 334
+ N P + L+ +M S + PD T VL AC L+AL G H Y N
Sbjct: 384 CVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVN 443
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
+ N+L+DMY +CG L+ A++VFD M RD+ SW +++ +G+ G G AL+LF+ MQ
Sbjct: 444 TSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQE 503
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT-DDYRITPRIEHFACLVDLLGRAGRV 453
+G++PD + +AILSACSHSGL++EGK F M+ D+ + PRI+H+ C+ DLL RAG +
Sbjct: 504 TGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYL 563
Query: 454 DEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIY 513
DEAYD + +MP EP+ RV GTLLS+C Y N ++G + + L E + VLLSN Y
Sbjct: 564 DEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLVLLSNTY 622
Query: 514 AKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
+ A RW++ +R + K+R + KTPG S V++
Sbjct: 623 SAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 220/449 (48%), Gaps = 46/449 (10%)
Query: 69 IKLMRAYAACGEPGTARKVFDEISER--NVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+ L R YA+C E AR VFDEI N + +++MIR+Y +N + AL ++ +M+N G
Sbjct: 39 VNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSG 98
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
RP YTYP VLKAC+ + G +H + +++V L+ Y KCG L A
Sbjct: 99 VRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAI 158
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL-GQKPDAGTMASLMPAVTNT 245
V DEMP+RD+V+WN+M++G++ + D + + +M + G P+ T+ + PA+
Sbjct: 159 KVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRA 218
Query: 246 S---------------------------------SDNVLYVKDIFINLEKKSLVSWNVMI 272
S ++Y + +F KK+ V+W+ MI
Sbjct: 219 GALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMI 278
Query: 273 TVYMKNSMPGNAIDLYLQMEKSE----VEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
Y++N M A +++ QM ++ V P AI +L C L GR +H Y +
Sbjct: 279 GGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAI--GLILMGCARFGDLSGGRCVHCYAVK 336
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
+L ++N++I YA+ G L DA + F ++ +DV S+ SLI+ + + + L
Sbjct: 337 AGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRL 396
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFACLVDLL 447
F EM+ SGI PD + +L+ACSH L G + + Y + I + L+D+
Sbjct: 397 FHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMY 454
Query: 448 GRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
+ G++D A V M + + W T+L
Sbjct: 455 TKCGKLDVAKRVFDTMH-KRDIVSWNTML 482
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 11/303 (3%)
Query: 31 IAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDE 90
+A+ L+ ++ D+ + VH + + ++ ++ YA G A + F E
Sbjct: 309 VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSE 368
Query: 91 ISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFG 150
I ++V+ YN +I V N ++ +F EM G RPD T VL ACS L G
Sbjct: 369 IGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Query: 151 LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
HG + N + N L+ MY KCG L A+ V D M +RD+VSWN+M+ G+ +
Sbjct: 429 SSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIH 488
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNV 270
+AL + M + G PD T+ +++ A ++ S V K +F ++ + +NV
Sbjct: 489 GLGKEALSLFNSMQETGVNPDEVTLLAILSACSH--SGLVDEGKQLFNSMSRG---DFNV 543
Query: 271 MITVYMKNSM------PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE 324
+ + N M G + Y + K EPD ++L AC LG + +
Sbjct: 544 IPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSK 603
Query: 325 YVE 327
++
Sbjct: 604 KMQ 606
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 23/240 (9%)
Query: 305 SVLPACGDLSALLLGRRIHEYVERKK--LRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
S+L C L+LG+ IH+++ ++ L + +L N L +YA C +E A+ VFD++
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIP 62
Query: 363 FRDV--ASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
+ +W +I AY AL L+ +M NSG+ P + +L AC+ +++G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 421 KVYFKQM------TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGT 474
K+ + TD Y T LVD + G ++ A V +MP + + W
Sbjct: 123 KLIHSHVNCSDFATDMYVCTA-------LVDFYAKCGELEMAIKVFDEMP-KRDMVAWNA 174
Query: 475 LLSSCRVYSNMD--IGL-LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR 531
++S ++ + IGL L + LSP S + + +AG +E V R
Sbjct: 175 MISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPAL-GRAGALREGKAVHGYCTR 233
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/578 (30%), Positives = 304/578 (52%), Gaps = 71/578 (12%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRP 129
L+ Y G A +F + +++V +NV+I Y +N + A +F +V+ G P
Sbjct: 269 LVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP 328
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNLFVGNGLISMYGKCGCLLEARYV 188
D+ T +L C+ +L G ++H +L+ L + VGN LIS Y + G A +
Sbjct: 329 DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWA 388
Query: 189 LDEMPRRDVVSWNSMVAGYA-----------------QNMRFDDA-----LEVCREMDDL 226
M +D++SWN+++ +A + + D L+ C + +
Sbjct: 389 FSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 227 GQKPDA---GTMASLM-----PAVTNTSSD------NVLYVKDIFINL-EKKSLVS---- 267
G+ + A L+ P + N D NV Y IF+ L E+++LVS
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSL 508
Query: 268 ---------------------------WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
W++M+ +Y ++ P AI ++ +++ + P+
Sbjct: 509 LSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNT 568
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
+T ++LP C L++L L R+ H Y+ R L ++ L+ +L+D+YA+CG L+ A VF
Sbjct: 569 VTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQS 627
Query: 361 MKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
RD+ +T++++ Y + G+G AL ++S M S I PDH+ +L+AC H+GL+++G
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDG 687
Query: 421 KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCR 480
+ + + + P +E +AC VDL+ R GR+D+AY + QMP+EPN +WGTLL +C
Sbjct: 688 LQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACT 747
Query: 481 VYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGI 540
Y+ MD+G A++LLQ + +G +VL+SN+YA +W+ V E+R+LMK++ ++K G
Sbjct: 748 TYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGC 807
Query: 541 SNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKE 578
S +E++ Q + F++GD SHP+ I++ + L +MKE
Sbjct: 808 SWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 159/668 (23%), Positives = 273/668 (40%), Gaps = 86/668 (12%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA D+ + + +H + L + ++ YA C +K+F ++ + V
Sbjct: 29 KACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPV 88
Query: 98 FYNVMIRSYVNNRWYNDALLVFREM-VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGA 156
+N+++ ++ + + F+ M +P + T+ VL C + G +H
Sbjct: 89 VWNIVLTG-LSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSY 147
Query: 157 MLKVRLDWNLFVGNGLISMYGKCGCLLEARYV-LDEMPRRDVVSWNSMVAGYAQNMRFDD 215
++K L+ + VGN L+SMY K G + Y D + +DVVSWN+++AG+++N D
Sbjct: 148 IIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMAD 207
Query: 216 ALEVCREMDDLGQKPDAGTMASLMPA-------------------------------VTN 244
A M +P+ T+A+++P V N
Sbjct: 208 AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCN 267
Query: 245 TSSDNVLYVKDI------FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVE 297
+ L V I F + K LVSWNV+I Y N A L+ + K +V
Sbjct: 268 SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVS 327
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLE-----NSLIDMYARCGCLE 352
PD++T S+LP C L+ L G+ IH Y+ LR + LLE N+LI YAR G
Sbjct: 328 PDSVTIISILPVCAQLTDLASGKEIHSYI----LRHSYLLEDTSVGNALISFYARFGDTS 383
Query: 353 DAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACS 412
A F M +D+ SW +++ A+ + + L L + N I+ D + +++L C
Sbjct: 384 AAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCI 443
Query: 413 H-SGLLEEGKVYFKQMTDDYRITPRIEH-------FACLVDLLGRAGRVDEAYDVIKQMP 464
+ G+ GKV + Y + + H L+D + G V+ A+ + +
Sbjct: 444 NVQGI---GKV---KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLS 497
Query: 465 LEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTE 524
+ +LLS Y N A ++S + L+ IYA++ E
Sbjct: 498 ERRTLVSYNSLLSG---YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIG 554
Query: 525 VRSLMKRRRIRKT-----------PGISNVELNSQVHTFLA-GDTSHPQSKEIYEELYVL 572
V ++ R +R ++++ L Q H ++ G + K ++Y
Sbjct: 555 VFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAK 614
Query: 573 VGKMKELGYVPETDSALHDVEEEDKEGHLAVHS---EKLAIVFALLNTHESP--IRITKN 627
G +K V ++D+ V AVH E L I + ++ P + IT
Sbjct: 615 CGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTM 674
Query: 628 LRVCGDCH 635
L C CH
Sbjct: 675 LTAC--CH 680
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 155/340 (45%), Gaps = 49/340 (14%)
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
GF D+ + V+KAC+ +L G LHG + K+ V +++MY KC + +
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 186 RYVLDEMPRRDVVSWNSMVAGYA-----QNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
+ + +M D V WN ++ G + + MRF A+ E KP + T A ++P
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADE-----PKPSSVTFAIVLP 130
Query: 241 AVT----------------------NTSSDNVL---YVKDIFI---------NLEKKSLV 266
+T N L Y K FI + K +V
Sbjct: 131 LCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVV 190
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS---ALLLGRRIH 323
SWN +I + +N+M +A + M K EP+ T A+VLP C + A GR+IH
Sbjct: 191 SWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIH 250
Query: 324 EYV-ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
YV +R L+ ++ + NSL+ Y R G +E+A +F +M +D+ SW +I+ Y +
Sbjct: 251 SYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEW 310
Query: 383 CNALALFSEMQNSG-ISPDHIAFVAILSACSHSGLLEEGK 421
A LF + + G +SPD + ++IL C+ L GK
Sbjct: 311 FKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 160/359 (44%), Gaps = 49/359 (13%)
Query: 49 LKNVH---TKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER-NVVFYNVMIR 104
+K VH K L+ E P LG L+ AYA CG A K+F +SER +V YN ++
Sbjct: 451 VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 105 SYVNN-------------------------RWY------NDALLVFREMVNGGFRPDNYT 133
YVN+ R Y N+A+ VFRE+ G RP+ T
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP 193
+L C+ +L Q HG +++ L ++ + L+ +Y KCG L A V
Sbjct: 571 IMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDA 629
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNV- 250
RRD+V + +MVAGYA + R +AL + M + KPD + +++ A + D +
Sbjct: 630 RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
+Y ++ K ++ + + + + +A QM VEP+A ++L AC
Sbjct: 690 IYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQM---PVEPNANIWGTLLRAC 746
Query: 311 GDLSALLLGRRIHEYV---ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
+ + LG + ++ E ++L+ N MYA E ++ + MK +++
Sbjct: 747 TTYNRMDLGHSVANHLLQAESDDTGNHVLISN----MYAADAKWEGVMELRNLMKKKEM 801
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 181/584 (30%), Positives = 299/584 (51%), Gaps = 41/584 (7%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ H ++ ++S + + L+ Y G KVF + ERN ++ M+ Y
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 110 RWYNDALLVF----REMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN 165
+A+ VF RE G +Y + VL + + + + G Q+H +K L
Sbjct: 198 GRVEEAIKVFNLFLREKEEG--SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
+ + N L++MY KC L EA + D R+ ++W++MV GY+QN +A+++ M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 226 LGQKPDAGTMASLMPAVTN-------------------------TSSDNVLYVK------ 254
G KP T+ ++ A ++ T++ +Y K
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 255 --DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
F L+++ + W +I+ Y++NS A+ LY +M+ + + P+ T ASVL AC
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSS 435
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
L+ L LG+++H + + + + ++L MY++CG LED VF + +DV SW ++
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
IS GQG AL LF EM G+ PD + FV I+SACSH G +E G YF M+D
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAA 492
+ P+++H+AC+VDLL RAG++ EA + I+ ++ +W LLS+C+ + ++G+ A
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAG 615
Query: 493 DNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF 552
+ L+ L +S YV LS IY GR ++V V M+ + K G S +EL +Q H F
Sbjct: 616 EKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVF 675
Query: 553 LAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEED 596
+ GDT HP +E + + ++ +M E G+V DS+ VEEE+
Sbjct: 676 VVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSF--VEEEE 717
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 180/376 (47%), Gaps = 52/376 (13%)
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
NL G +HG +++ + N L++ Y KCG L +A + + + +DVVSWNS++
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 206 GYAQNMRFDDA---LEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV------LYVK-- 254
GY+QN + +++ REM P+A T+A + A ++ S V L VK
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 255 ---DIFIN----------------------LEKKSLVSWNVMITVYMKNSMPGNAI---D 286
DI+++ + +++ +W+ M++ Y AI +
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYA 346
L+L+ EK E +VL + + LGR+IH + L + L N+L+ MY+
Sbjct: 209 LFLR-EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 347 RCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVA 406
+C L +A K+FD R+ +W+++++ Y G+ A+ LFS M ++GI P V
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 407 ILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFA--CLVDLLGRAGRVDEA---YDVIK 461
+L+ACS LEEGK + ++ FA LVD+ +AG + +A +D ++
Sbjct: 328 VLNACSDICYLEEGKQLHSFL---LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 462 QMPLEPNERVWGTLLS 477
E + +W +L+S
Sbjct: 385 ----ERDVALWTSLIS 396
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 17/194 (8%)
Query: 293 KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLE 352
++E+ P T L L+ GR +H + R + N L++ YA+CG L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 353 DAQKVFDKMKFRDVASWTSLISAYGMTG---QGCNALALFSEMQNSGISPDHIAFVAILS 409
A +F+ + +DV SW SLI+ Y G + LF EM+ I P+ I
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 410 ACSHSGLLEEGK------VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
A S G+ V D Y T LV + +AG V++ V M
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTS-------LVGMYCKAGLVEDGLKVFAYM 179
Query: 464 PLEPNERVWGTLLS 477
P E N W T++S
Sbjct: 180 P-ERNTYTWSTMVS 192
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 185/555 (33%), Positives = 281/555 (50%), Gaps = 38/555 (6%)
Query: 29 PVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVF 88
PV L L Q + + VH K+I + LG L AY A F
Sbjct: 3 PVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSF 62
Query: 89 DEIS--ERNVVFYNVMIRSYVNNR--WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS 144
+ I +RN +N ++ Y ++ Y+D LL++ M D++ +KAC
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL 122
Query: 145 DNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMV 204
L G+ +HG +K LD + +V L+ MY + G + A+ V DE+P R+ V W ++
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 205 AGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV-------------- 250
GY + + + + M D G DA T+ L+ A N + V
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 251 ------------LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ 290
+YVK +F +++V W +I+ + K A DL+ Q
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 291 MEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGC 350
M + + P+ T A++L +C L +L G+ +H Y+ R + + + S IDMYARCG
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGN 362
Query: 351 LEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA 410
++ A+ VFD M R+V SW+S+I+A+G+ G AL F +M++ + P+ + FV++LSA
Sbjct: 363 IQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSA 422
Query: 411 CSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER 470
CSHSG ++EG F+ MT DY + P EH+AC+VDLLGRAG + EA I MP++P
Sbjct: 423 CSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
Query: 471 VWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMK 530
WG LLS+CR++ +D+ A+ LL + PE+S YVLLSNIYA AG W+ V VR M
Sbjct: 483 AWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMG 542
Query: 531 RRRIRKTPGISNVEL 545
+ RK G S E+
Sbjct: 543 IKGYRKHVGQSATEV 557
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 284/531 (53%), Gaps = 46/531 (8%)
Query: 53 HTKLIYLNSHENPSLGIKLMRAYAACGEPGT--ARKVFDEISERNVVFYNVMIRSYVNNR 110
H ++ + ++G L+ Y G PG R+VFD ++ + + M+ YV +
Sbjct: 84 HAHVVKSGLETDRNVGNSLLSLYFKLG-PGMRETRRVFDGRFVKDAISWTSMMSGYVTGK 142
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+ AL VF EMV+ G + +T +KACS +R G HG ++ +WN F+ +
Sbjct: 143 EHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISS 202
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD-DLGQK 229
L +YG ++AR V DEMP DV+ W ++++ +++N +++AL + M G
Sbjct: 203 TLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLV 262
Query: 230 PDAGTMASLMPA-----------------VTNTSSDNVLY----------------VKDI 256
PD T +++ A +TN NV+ + +
Sbjct: 263 PDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQV 322
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSAL 316
F + KK+ VSW+ ++ Y +N AI+++ +ME E D +VL AC L+A+
Sbjct: 323 FNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAV 378
Query: 317 LLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAY 376
LG+ IH R+ N+++E++LID+Y + GC++ A +V+ KM R++ +W +++SA
Sbjct: 379 RLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSAL 438
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
G+G A++ F++M GI PD+I+F+AIL+AC H+G+++EG+ YF M Y I P
Sbjct: 439 AQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPG 498
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLA---AD 493
EH++C++DLLGRAG +EA +++++ + +WG LL C +N D +A A
Sbjct: 499 TEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCA--ANADASRVAERIAK 556
Query: 494 NLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVE 544
+++L P+ YVLLSN+Y GR + +R LM RR + KT G S ++
Sbjct: 557 RMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 180/380 (47%), Gaps = 41/380 (10%)
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG-CLLEARYVLDEM 192
Y +L+ C+ + G+Q H ++K L+ + VGN L+S+Y K G + E R V D
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN-------- 244
+D +SW SM++GY ALEV EM G + T++S + A +
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 245 -----------------TSSDNVLY--------VKDIFINLEKKSLVSWNVMITVYMKNS 279
+S+ LY + +F + + ++ W +++ + KN
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 280 MPGNAIDLYLQMEKSE-VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLE 338
+ A+ L+ M + + + PD T +VL ACG+L L G+ IH + + N+++E
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 339 NSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGIS 398
+SL+DMY +CG + +A++VF+ M ++ SW++L+ Y G+ A+ +F EM+
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE---- 359
Query: 399 PDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYD 458
D F +L AC+ + GK Q I A L+DL G++G +D A
Sbjct: 360 KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESA-LIDLYGKSGCIDSASR 418
Query: 459 VIKQMPLEPNERVWGTLLSS 478
V +M + N W +LS+
Sbjct: 419 VYSKMSIR-NMITWNAMLSA 437
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 34/369 (9%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA + ++ + H +I N + L Y EP AR+VFDE+ E +V+
Sbjct: 171 KACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVI 230
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNG-GFRPDNYTYPCVLKACSCSDNLRFGLQLHGA 156
+ ++ ++ N Y +AL +F M G G PD T+ VL AC L+ G ++HG
Sbjct: 231 CWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGK 290
Query: 157 MLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDA 216
++ + N+ V + L+ MYGKCG + EAR V + M +++ VSW++++ GY QN + A
Sbjct: 291 LITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKA 350
Query: 217 LEVCREMDD-----LGQ--KPDAGTMASLMPA------VTNTSSDNVLYVKDIFINLEKK 263
+E+ REM++ G K AG A + V NV+ V+ I+L K
Sbjct: 351 IEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI-VESALIDLYGK 409
Query: 264 S-----------------LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
S +++WN M++ +N A+ + M K ++PD I+ ++
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 307 LPACGDLSALLLGRRIHEYVERK-KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
L ACG + GR + + ++P + +ID+ R G E+A+ + ++ + R+
Sbjct: 470 LTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Query: 366 VAS-WTSLI 373
AS W L+
Sbjct: 530 DASLWGVLL 538
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 157/327 (48%), Gaps = 22/327 (6%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H KLI N + L+ Y CG AR+VF+ +S++N V ++ ++ Y N
Sbjct: 285 KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQN 344
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ A+ +FREM D Y + VLKAC+ +R G ++HG ++ N+ V
Sbjct: 345 GEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ LI +YGK GC+ A V +M R++++WN+M++ AQN R ++A+ +M G K
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIK 460
Query: 230 PDAGTMASLMPAVTNTSSDN------VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGN 283
PD + +++ A +T + VL K I K ++ MI + + +
Sbjct: 461 PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI---KPGTEHYSCMIDLLGRAGLFEE 517
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK--KLRPNLLLENSL 341
A +L +E++E DA +L C +A R+ E + ++ +L P + L
Sbjct: 518 AENL---LERAECRNDASLWGVLLGPC---AANADASRVAERIAKRMMELEPKYHMSYVL 571
Query: 342 I-DMYARCGCLEDAQKVFDKMKFRDVA 367
+ +MY G DA + M R VA
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVA 598
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 277/505 (54%), Gaps = 44/505 (8%)
Query: 44 PDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
P A K +H +I + ++ IKL+ + CG AR+VFDE+ + + YN MI
Sbjct: 48 PAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMI 107
Query: 104 RSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ-----LHGAML 158
Y+ + + LL+ + M G + D YT VLKA + + + +H ++
Sbjct: 108 SGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
K ++ + + L+ Y K G L AR V + M +VV SM++GY +DA E
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 219 VCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKN 278
+ N VKDI + +N M+ + ++
Sbjct: 228 IF----------------------------NTTKVKDIVV---------YNAMVEGFSRS 250
Query: 279 SMPGN-AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
++D+Y+ M+++ P+ T ASV+ AC L++ +G+++H + + + ++ +
Sbjct: 251 GETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKM 310
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
+SL+DMYA+CG + DA++VFD+M+ ++V SWTS+I YG G AL LF+ M+ I
Sbjct: 311 GSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRI 370
Query: 398 SPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAY 457
P+++ F+ LSACSHSGL+++G F+ M DY + P++EH+AC+VDL+GRAG +++A+
Sbjct: 371 EPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAF 430
Query: 458 DVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ-SGYYVLLSNIYAKA 516
+ + MP P+ +W LLSSC ++ N+++ +AA L +L+ ++ G Y+ LSN+YA
Sbjct: 431 EFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASN 490
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGIS 541
+W V+++R +MKRRRI KT G S
Sbjct: 491 DKWDNVSKIREVMKRRRISKTIGRS 515
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 295/568 (51%), Gaps = 38/568 (6%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ VH +I N +G L+ YA C A + F EISE N V +N +I +V
Sbjct: 121 EQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 110 RWYNDALLVFREM-VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
R A + M + D T+ +L Q+H +LK+ L + +
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 240
Query: 169 GNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
N +IS Y CG + +A+ V D + +D++SWNSM+AG++++ + A E+ +M
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 228 QKPDAGTMASLMPAVTN----------------------TSSDNVL---YVK-------- 254
+ D T L+ A + TS+ N L Y++
Sbjct: 301 VETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMED 360
Query: 255 --DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+F +L+ K L+SWN +IT + + + +A+ + + SE++ D +++L +C D
Sbjct: 361 ALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSD 420
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTS 371
L+ L LG++IH + N + +SLI MY++CG +E A+K F ++ + +W +
Sbjct: 421 LATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNA 480
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
+I Y G G +L LFS+M N + DH+ F AIL+ACSH+GL++EG M Y
Sbjct: 481 MILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVY 540
Query: 432 RITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLA 491
+I PR+EH+A VDLLGRAG V++A ++I+ MPL P+ V T L CR +++
Sbjct: 541 KIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQV 600
Query: 492 ADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHT 551
A++LL++ PE YV LS++Y+ +W+E V+ +MK R ++K PG S +E+ +QV
Sbjct: 601 ANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKA 660
Query: 552 FLAGDTSHPQSKEIYEELYVLVGKMKEL 579
F A D S+P ++IY + L +M+ L
Sbjct: 661 FNAEDRSNPLCQDIYMMIKDLTQEMQWL 688
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 217/466 (46%), Gaps = 41/466 (8%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
+++ +Y G G A +FDE+ +R+ V +N MI Y + DA +F M G
Sbjct: 40 RILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV 99
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D Y++ +LK + G Q+HG ++K + N++VG+ L+ MY KC + +A
Sbjct: 100 DGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAF 159
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD-DLGQKPDAGTMASLMP-------- 240
E+ + VSWN+++AG+ Q A + M+ DAGT A L+
Sbjct: 160 KEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFC 219
Query: 241 -----------------------AVTNTSSD--NVLYVKDIFINL-EKKSLVSWNVMITV 274
A+ ++ +D +V K +F L K L+SWN MI
Sbjct: 220 NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 275 YMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN 334
+ K+ + +A +L++QM++ VE D T +L AC + G+ +H V +K L
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQV 339
Query: 335 LLLENSLIDMYAR--CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM 392
N+LI MY + G +EDA +F+ +K +D+ SW S+I+ + G +A+ FS +
Sbjct: 340 TSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYL 399
Query: 393 QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGR 452
++S I D AF A+L +CS L+ G+ T ++ + L+ + + G
Sbjct: 400 RSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV-ISSLIVMYSKCGI 458
Query: 453 VDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQL 498
++ A +Q+ + + W ++ Y+ +G ++ D Q+
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILG---YAQHGLGQVSLDLFSQM 501
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 162/351 (46%), Gaps = 38/351 (10%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEI-SERNVVFYNVMIRSYV 107
LK VH K++ L ++ ++ +YA CG A++VFD + ++++ +N MI +
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
+ A +F +M D YTY +L ACS ++ FG LHG ++K L+
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 168 VGNGLISMYGK--CGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDA--------- 216
N LISMY + G + +A + + + +D++SWNS++ G+AQ +DA
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 217 -------------LEVCREMDDLGQKPDAGTMASLMPAVTN---TSSDNVLYVKDIFINL 260
L C ++ L +A+ V+N SS V+Y K I
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 261 EKK---------SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+K S V+WN MI Y ++ + ++DL+ QM V+ D +T ++L AC
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 312 DLSALLLGRRIHEYVER-KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
+ G + +E K++P + + +D+ R G + A+++ + M
Sbjct: 522 HTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESM 572
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
H Y + ++ + N ++D Y + G L A +FD+M RD SW ++IS Y G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFA 441
+A LF+ M+ SG D +F +L + + G +V+ + Y + +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVG--S 140
Query: 442 CLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
LVD+ + RV++A++ K++ EPN W L++
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIA 175
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 291/543 (53%), Gaps = 45/543 (8%)
Query: 46 IIALKNVHTKLIYLNSHE-------NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVF 98
+ + +NV +L+ ++ + N L L+ Y G+ ARK+FD IS+R+VV
Sbjct: 21 LCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVS 80
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
+ MI + ++ DALL+F+EM + + +TY VLK+C L+ G+Q+HG++
Sbjct: 81 WTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVE 140
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
K NL V + L+S+Y +CG + EAR D M RD+VSWN+M+ GY N D +
Sbjct: 141 KGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFS 200
Query: 219 VCREMDDLGQKPDAGTMASLMPAVTNTSSDNVL-------------------------YV 253
+ + M G+KPD T SL+ A ++ YV
Sbjct: 201 LFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYV 260
Query: 254 K--------DIFINLEKKSLVSWNVMITVY-MKNSMPGNAIDLYLQMEKSEVEPDAITCA 304
K + +K+ L+S +IT + +N+ +A D++ M + + + D + +
Sbjct: 261 KCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVS 320
Query: 305 SVLPACGDLSALLLGRRIHEY-VERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
S+L C ++++ +GR+IH + ++ ++R ++ L NSLIDMYA+ G +EDA F++MK
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKE 380
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
+DV SWTSLI+ YG G A+ L++ M++ I P+ + F+++LSACSH+G E G
Sbjct: 381 KDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKI 440
Query: 424 FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI--KQMPLEPNERVWGTLLSSCRV 481
+ M + + I R EH +C++D+L R+G ++EAY +I K+ + + WG L +CR
Sbjct: 441 YDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRR 500
Query: 482 YSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRR-RIRKTPGI 540
+ N+ + +AA LL + P + Y+ L+++YA G W R LMK K PG
Sbjct: 501 HGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGY 560
Query: 541 SNV 543
S V
Sbjct: 561 SLV 563
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 166/387 (42%), Gaps = 35/387 (9%)
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP 193
Y LK CS + + L +HG + NL + + LI +Y K G + AR + D +
Sbjct: 15 YLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRIS 74
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP------------- 240
+RDVVSW +M++ +++ DAL + +EM K + T S++
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 241 ---AVTNTSSDNVLYVKDIFINL-----------------EKKSLVSWNVMITVYMKNSM 280
+V + L V+ ++L +++ LVSWN MI Y N+
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
+ L+ M +PD T S+L A + L + +H + + L S
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRS 254
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQ-GCNALALFSEMQNSGISP 399
L++ Y +CG L +A K+ + K RD+ S T+LI+ + +A +F +M
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
D + ++L C+ + G+ +I + L+D+ ++G +++A
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 460 IKQMPLEPNERVWGTLLSSCRVYSNMD 486
++M E + R W +L++ + N +
Sbjct: 375 FEEMK-EKDVRSWTSLIAGYGRHGNFE 400
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/613 (30%), Positives = 296/613 (48%), Gaps = 108/613 (17%)
Query: 76 AACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYP 135
A G +AR+VFD + E + V +N M+ SY + +A+ +F ++ +PD+Y++
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 136 CVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV------- 188
+L C+ N++FG ++ +++ +L V N LI MYGKC L A V
Sbjct: 75 AILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCD 134
Query: 189 -----------------------LD---EMPRRDVVSWNSMVAGYAQNMRFDDALEVCRE 222
LD EMP+R +WN M++G+A + + L + +E
Sbjct: 135 SRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 223 MDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFI------------------------ 258
M + KPD T +SLM A + SS NV+Y + +
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSS-NVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 259 -----------NLEKKSLVSWN-------------------------------VMITVYM 276
++E + VSWN MIT Y
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
+N A+ +++M KS V+ D +VL AC L+ L G+ IH + +
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAY 373
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ N+L+++YA+CG +++A + F + +D+ SW +++ A+G+ G AL L+ M SG
Sbjct: 374 VGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASG 433
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
I PD++ F+ +L+ CSHSGL+EEG + F+ M DYRI ++H C++D+ GR G + EA
Sbjct: 434 IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEA 493
Query: 457 YDVIKQ----MPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNI 512
D+ + N W TLL +C + + ++G + L P + +VLLSN+
Sbjct: 494 KDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNL 553
Query: 513 YAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVL 572
Y GRWKE +VR M R ++KTPG S +E+ +QV TF+ GD+SHP+ +E+ E L L
Sbjct: 554 YCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCL 613
Query: 573 VGKMKELGYVPET 585
+M+ PET
Sbjct: 614 QHEMRN----PET 622
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 183/462 (39%), Gaps = 104/462 (22%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ AY + A VF E+ +R +N+MI + + L +F+EM+ F+PD
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPD 203
Query: 131 NYTYPCVLKACSC-SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCL------L 183
YT+ ++ ACS S N+ +G +H MLK + N ++S Y K G L
Sbjct: 204 CYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMREL 263
Query: 184 EARYVLDEM-------------------------PRRDVVSWNSMVAGYAQNMRFDDALE 218
E+ VL ++ P +++V+W +M+ GY +N + AL
Sbjct: 264 ESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALR 323
Query: 219 VCREMDDLGQKPDAGTMASLMPAVT----------------NTSSDNVLYVKDIFINL-- 260
EM G D +++ A + + YV + +NL
Sbjct: 324 FFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYA 383
Query: 261 ---------------EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
K LVSWN M+ + + + A+ LY M S ++PD +T
Sbjct: 384 KCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIG 443
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLEN--SLIDMYARCGCLEDAQKVFDKMKF 363
+L C + G I E + K R L +++ +IDM+ R G L +A+ +
Sbjct: 444 LLTTCSHSGLVEEGCMIFESM-VKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL------ 496
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
+++SL++ S ++ ++ +L ACS E G
Sbjct: 497 --ATTYSSLVTD----------------------SSNNSSWETLLGACSTHWHTELG--- 529
Query: 424 FKQMTDDYRITPRIEH--FACLVDLLGRAGRVDEAYDVIKQM 463
++++ +I E F L +L GR E DV ++M
Sbjct: 530 -REVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H LI+ +G L+ YA CG+ A + F +I+ +++V +N M+ ++ +
Sbjct: 357 KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVH 416
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNLFV 168
+ AL ++ M+ G +PDN T+ +L CS S + G + +M+K R+ +
Sbjct: 417 GLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDH 476
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVC 220
+I M+G+ G L EA+ + +++S+V + N ++ L C
Sbjct: 477 VTCMIDMFGRGGHLAEAKDL--------ATTYSSLVTDSSNNSSWETLLGAC 520
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 5/181 (2%)
Query: 339 NSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGIS 398
S I A+ G + A++VFD M D +W +++++Y G A+ALF++++ S
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 399 PDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYD 458
PD +F AILS C+ G ++ G+ + + + L+D+ G+ A
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGR-KIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 459 VIKQMPLEP-NERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAG 517
V + M + NE W +LL + Y N + A D +++ + + ++ + +A G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 518 R 518
+
Sbjct: 184 K 184
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 291 bits (744), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 292/557 (52%), Gaps = 55/557 (9%)
Query: 49 LKNVHTKLIYLN-SHENPSLGIKL-MRAYAACGEPGTARKVFDEISERNVVFYNVMIRSY 106
L +HT LI L S E P + L A ++ G+ A K ++S+ +N +IR +
Sbjct: 24 LYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGF 83
Query: 107 VNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL 166
N+R ++ V+ +M+ G PD+ TYP ++K+ S N + G LH +++K L+W+L
Sbjct: 84 SNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDL 143
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
F+ N LI MYG AR + DEMP +++V+WNS++ YA+
Sbjct: 144 FICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAK----------------- 186
Query: 227 GQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
S +V+ + +F + ++ +V+W+ MI Y+K A++
Sbjct: 187 --------------------SGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALE 226
Query: 287 LYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
++ QM + + + +T SV+ AC L AL G+ +H Y+ L ++L+ SLIDMY
Sbjct: 227 IFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMY 286
Query: 346 ARCGCLEDAQKVFDK--MKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
A+CG + DA VF + +K D W ++I G +L LF +M+ S I PD I
Sbjct: 287 AKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEIT 346
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
F+ +L+ACSH GL++E +FK + + P+ EH+AC+VD+L RAG V +A+D I +M
Sbjct: 347 FLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
Query: 464 PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVT 523
P++P + G LL+ C + N+++ L++L P G YV L+N+YA +++
Sbjct: 406 PIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAAR 465
Query: 524 EVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVP 583
+R M+++ ++K G S ++L+ H F+A D +H S +IY L L G L
Sbjct: 466 SMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQ-LTGAWMNL---- 520
Query: 584 ETDSALHDVEEEDKEGH 600
DV+ +D++ H
Sbjct: 521 -------DVDYDDQDNH 530
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 245/471 (52%), Gaps = 38/471 (8%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ YA CG +R +FD S R V+ +N MI Y+ N +AL++F EM N R D
Sbjct: 259 LISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNET-RED 317
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ T V+ AC L G Q+H K L ++ V + L+ MY KCG +EA +
Sbjct: 318 SRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFS 377
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
E+ D + NSM+ Y R DDA
Sbjct: 378 EVESYDTILLNSMIKVYFSCGRIDDA---------------------------------- 403
Query: 251 LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
K +F +E KSL+SWN M + +N ++ + QM K ++ D ++ +SV+ AC
Sbjct: 404 ---KRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISAC 460
Query: 311 GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWT 370
+S+L LG ++ L + ++ +SLID+Y +CG +E ++VFD M D W
Sbjct: 461 ASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWN 520
Query: 371 SLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
S+IS Y GQG A+ LF +M +GI P I F+ +L+AC++ GL+EEG+ F+ M D
Sbjct: 521 SMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVD 580
Query: 431 YRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLL 490
+ P EHF+C+VDLL RAG V+EA +++++MP + + +W ++L C +G
Sbjct: 581 HGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKK 640
Query: 491 AADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGIS 541
AA+ +++L PE S YV LS I+A +G W+ VR LM+ + K PG S
Sbjct: 641 AAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 146/320 (45%), Gaps = 42/320 (13%)
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVR-LDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
Y +L++CS + Q +G +LK L + V N L+ MY + G + AR + DEM
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLY 252
P R+ SWN+M+ GY + +L D+ + D + ++ +V
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFF----DMMPERDGYSWNVVVSGFAKAGELSV-- 142
Query: 253 VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+ +F + +K +V+ N ++ Y+ N A+ L+ ++ S DAIT +VL AC +
Sbjct: 143 ARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADAITLTTVLKACAE 199
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLE-------------------- 352
L AL G++IH + + + + +SL+++YA+CG L
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSAL 259
Query: 353 -----------DAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
+++ +FD+ R V W S+IS Y AL LF+EM+N D
Sbjct: 260 ISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDS 318
Query: 402 IAFVAILSACSHSGLLEEGK 421
A+++AC G LE GK
Sbjct: 319 RTLAAVINACIGLGFLETGK 338
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 254/489 (51%), Gaps = 41/489 (8%)
Query: 87 VFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGF-RPDNYTYPCVLKACSCSD 145
VF+ + +N +I+ Y N + + + + M+ G RPD YT+P V+K CS +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA 205
+R G +HG +L++ D ++ VG + YGKC L AR V EMP R+ VSW ++V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 206 GYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSL 265
Y ++ ++A + M DL + + G+ +L+ + S +++ K +F + K+ +
Sbjct: 185 AYVKSGELEEA----KSMFDLMPERNLGSWNALVDGLVK--SGDLVNAKKLFDEMPKRDI 238
Query: 266 VS-------------------------------WNVMITVYMKNSMPGNAIDLYLQMEKS 294
+S W+ +I Y +N P A ++ +M
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 295 EVEPDAITCASVLPACGDLSALLLGRRIHEYVERK--KLRPNLLLENSLIDMYARCGCLE 352
V+PD ++ AC + L ++ Y+ ++ K + ++ +LIDM A+CG ++
Sbjct: 299 NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP-ALIDMNAKCGHMD 357
Query: 353 DAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACS 412
A K+F++M RD+ S+ S++ + G G A+ LF +M + GI PD +AF IL C
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 413 HSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVW 472
S L+EEG YF+ M Y I +H++C+V+LL R G++ EAY++IK MP E + W
Sbjct: 418 QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAW 477
Query: 473 GTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRR 532
G+LL C ++ N +I + A +L +L P+ +G YVLLSNIYA RW +V +R M
Sbjct: 478 GSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNEN 537
Query: 533 RIRKTPGIS 541
I K G S
Sbjct: 538 GITKICGRS 546
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 76 AACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYP 135
A CG A K+F+E+ +R++V Y M+ + ++A+ +F +MV+ G PD +
Sbjct: 351 AKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFT 410
Query: 136 CVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG----NGLISMYGKCGCLLEARYVLDE 191
+LK C S + GL+ M R +++ + ++++ + G L EA ++
Sbjct: 411 VILKVCGQSRLVEEGLRYFELM---RKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKS 467
Query: 192 MP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
MP +W S++ G + + + A V R + +L
Sbjct: 468 MPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFEL 503
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 285 bits (729), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 275/533 (51%), Gaps = 41/533 (7%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDE--ISERNVVFYNVMIRSYV 107
K VH+ +I S+ L+ Y C A VF+E ++ R+ V +NV+I
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
+ +++LLVFR+M+ RP + T+ V+ +CSC+ G Q+HG +K +
Sbjct: 269 GFK-RDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTL 324
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
V N ++MY A V + + +D+V+WN+M++ Y Q A+ V + M +G
Sbjct: 325 VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 228 QKPDAGTMASLMPA-----------------------------VTNTSSDNVLYVKDIFI 258
KPD T SL+ ++ S + + D+
Sbjct: 385 VKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLF 444
Query: 259 NLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE--PDAITCASVLPACGDLSA 315
+K+L+SWN +I+ + N P ++ + + +SEV PDA T +++L C S+
Sbjct: 445 ERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSS 504
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L+LG + H YV R L+ N+LI+MY++CG ++++ +VF++M +DV SW SLISA
Sbjct: 505 LMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISA 564
Query: 376 YGMTGQGCNALALFSEMQNSG-ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
Y G+G NA+ + MQ+ G + PD F A+LSACSH+GL+EEG F M + + +
Sbjct: 565 YSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVI 624
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER--VWGTLLSSCRVYSNMDIGLLAA 492
++HF+CLVDLLGRAG +DEA ++K R VW L S+C + ++ +G + A
Sbjct: 625 RNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVA 684
Query: 493 DNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
L++ + YV LSNIYA AG WKE E R + K G S + L
Sbjct: 685 KLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 205/443 (46%), Gaps = 42/443 (9%)
Query: 71 LMRAYAACGEPGTARKVFDEISERN-VVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
L+ A G+ A +VFD++ ER+ V +N MI + ++ ++ +FREM G R
Sbjct: 129 LLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRH 188
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D + + +L C +L FG Q+H ++K V N LI+MY C +++A V
Sbjct: 189 DKFGFATILSMCDYG-SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247
Query: 190 DE--MPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA------ 241
+E + RD V++N ++ G A R D++L V R+M + +P T S+M +
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Query: 242 ------------------VTN------TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMK 277
V+N +S ++ +F +LE+K LV+WN MI+ Y +
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
+ +A+ +Y +M V+PD T S+L DL L + + + L + +
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL---EMVQACIIKFGLSSKIEI 423
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
N+LI Y++ G +E A +F++ +++ SW ++IS + G L FS + S +
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 398 S--PDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
PD +LS C + L G + + + A L+++ + G +
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNA-LINMYSQCGTIQN 542
Query: 456 AYDVIKQMPLEPNERVWGTLLSS 478
+ +V QM E + W +L+S+
Sbjct: 543 SLEVFNQMS-EKDVVSWNSLISA 564
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 3/212 (1%)
Query: 36 LGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERN 95
G L D+ L+ V +I + L+ AY+ G+ A +F+ +N
Sbjct: 392 FGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKN 451
Query: 96 VVFYNVMIRSYVNNRWYNDALLVFREMVNGGFR--PDNYTYPCVLKACSCSDNLRFGLQL 153
++ +N +I + +N + + L F ++ R PD YT +L C + +L G Q
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQT 511
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRF 213
H +L+ +GN LI+MY +CG + + V ++M +DVVSWNS+++ Y+++
Sbjct: 512 HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEG 571
Query: 214 DDALEVCREMDDLGQK-PDAGTMASLMPAVTN 244
++A+ + M D G+ PDA T ++++ A ++
Sbjct: 572 ENAVNTYKTMQDEGKVIPDAATFSAVLSACSH 603
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 124/289 (42%), Gaps = 42/289 (14%)
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
RPD Y+ + + FG Q+H ++ L + V N L+S+Y + G L +
Sbjct: 53 LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLK 112
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS 246
DE+ DV SW ++++ + + A EV +M
Sbjct: 113 KKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMP---------------------- 150
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
E+ + WN MIT ++ +++L+ +M K V D A++
Sbjct: 151 --------------ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDK--MKFR 364
L C D +L G+++H V + + N+LI MY C + DA VF++ + R
Sbjct: 197 LSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 365 DVASWTSLISAYGMTG-QGCNALALFSEMQNSGISPDHIAFVAILSACS 412
D ++ +I G+ G + +L +F +M + + P + FV+++ +CS
Sbjct: 256 DQVTFNVVID--GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 34/191 (17%)
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRI 322
+L++ N +T ++ NA+ L+ + + + + PD + + + L + G ++
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTG-- 380
H Y R L + + N+L+ +Y R G L +K FD++ DV SWT+L+SA G
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 381 -----------------------QGC-------NALALFSEMQNSGISPDHIAFVAILSA 410
GC ++ LF EM G+ D F ILS
Sbjct: 140 EYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM 199
Query: 411 CSHSGLLEEGK 421
C + G L+ GK
Sbjct: 200 CDY-GSLDFGK 209
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 229/392 (58%), Gaps = 8/392 (2%)
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRF 213
HG + R N+ N +I Y K G ++ AR + D+M RD +SWN+M+ GY R
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 214 DDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMIT 273
+DA + EM P+ + M S NV + F +K VSWN +I
Sbjct: 329 EDAFALFSEM------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382
Query: 274 VYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP 333
Y KN A+DL+++M +PD T S+L A L L LG ++H+ V K + P
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV-KTVIP 441
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKF-RDVASWTSLISAYGMTGQGCNALALFSEM 392
++ + N+LI MY+RCG + +++++FD+MK R+V +W ++I Y G AL LF M
Sbjct: 442 DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSM 501
Query: 393 QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGR 452
+++GI P HI FV++L+AC+H+GL++E K F M Y+I P++EH++ LV++ G+
Sbjct: 502 KSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQ 561
Query: 453 VDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNI 512
+EA +I MP EP++ VWG LL +CR+Y+N+ + +AA+ + +L PE S YVLL N+
Sbjct: 562 FEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNM 621
Query: 513 YAKAGRWKEVTEVRSLMKRRRIRKTPGISNVE 544
YA G W E ++VR M+ +RI+K G S V+
Sbjct: 622 YADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 219/511 (42%), Gaps = 62/511 (12%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVL 138
G AR +F+++ RN V +N MI YV R N A +F M + D T+ ++
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP----KRDVVTWNTMI 109
Query: 139 KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV 198
+RF L+ + + F N +IS Y K + EA + ++MP R+ V
Sbjct: 110 SGYVSCGGIRF-LEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAV 168
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFI 258
SW++M+ G+ QN D A+ + R+M P +A L+ + + VL +
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLV 228
Query: 259 NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL 318
+ + + ++N +I Y + A L+ Q+ PD CGD
Sbjct: 229 SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQI------PD---------LCGD------ 267
Query: 319 GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGM 378
H R++ N++ NS+I Y + G + A+ +FD+MK RD SW ++I Y
Sbjct: 268 ---DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVH 324
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
+ +A ALFSEM N D ++ ++S + G +E + YF++ + + ++
Sbjct: 325 VSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS---- 376
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMDIGLLAADNL 495
+ ++ + EA D+ +M +E P+ +LLS+ N+ +G+ +
Sbjct: 377 -WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF--- 552
++ + L +Y++ G +M+ RRI ++L +V T+
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGE---------IMESRRI-----FDEMKLKREVITWNAM 481
Query: 553 LAGDTSHPQSKEIYEELYVLVGKMKELGYVP 583
+ G H + E L G MK G P
Sbjct: 482 IGGYAFHGNASEALN----LFGSMKSNGIYP 508
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 149/303 (49%), Gaps = 15/303 (4%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ YA+ G AR F++ E++ V +N +I +Y N+ Y +A+ +F M G +PD
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+T +L A + NLR G+Q+H ++K + ++ V N LI+MY +CG ++E+R + D
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFD 467
Query: 191 EMP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--- 246
EM +R+V++WN+M+ GYA + +AL + M G P T S++ A +
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVD 527
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
+V + + + + ++ ++ V A+ + M EPD ++
Sbjct: 528 EAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM---PFEPDKTVWGAL 584
Query: 307 LPACGDLSALLLGRRIHEYVER---KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
L AC + + L E + R + P +LL N MYA G ++A +V M+
Sbjct: 585 LDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYN----MYADMGLWDEASQVRMNMES 640
Query: 364 RDV 366
+ +
Sbjct: 641 KRI 643
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 274/529 (51%), Gaps = 41/529 (7%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVF---DEISERNVVFYNVMIRSYV 107
VH + + + S+ L+ Y+ G+ + +VF D+I +N+V NVMI S+
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFS 429
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
++ A+ +F M+ G R D ++ +L C L G Q+HG LK L +L
Sbjct: 430 QSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC---LNLGKQVHGYTLKSGLVLDLT 486
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
VG+ L ++Y KCG L E+ + +P +D W SM++G+ + +A+ + EM D G
Sbjct: 487 VGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG 546
Query: 228 QKPDAGTMASLMPAVTNTSS----------------DNVLYVKDIFINLEKK--SL---- 265
PD T+A+++ ++ S D + + +N+ K SL
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLAR 606
Query: 266 -----------VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
VS + +I+ Y ++ + + L+ M S D+ +S+L A
Sbjct: 607 QVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSD 666
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
LG ++H Y+ + L + +SL+ MY++ G ++D K F ++ D+ +WT+LI+
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
+Y G+ AL +++ M+ G PD + FV +LSACSH GL+EE + M DY I
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
P H+ C+VD LGR+GR+ EA I M ++P+ VWGTLL++C+++ +++G +AA
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKK 846
Query: 495 LLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNV 543
++L P +G Y+ LSNI A+ G W EV E R LMK ++K PG S+V
Sbjct: 847 AIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 207/421 (49%), Gaps = 44/421 (10%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A KVF + NV +N +I + N+ Y +F EM G +PD+YTY VL AC+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
+ LRFG + ++K + ++FV ++ +Y KCG + EA V +P VVSW M
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS----------------- 246
++GY ++ ALE+ +EM G + + T+ S++ A S
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 247 ----------------SDNVLYVKDIFINL---EKKSLVSWNVMITVYMKNSMPGNAIDL 287
S ++ + +F +L +++++V NVMIT + ++ PG AI L
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRL 440
Query: 288 YLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR 347
+ +M + + D + S+L L L LG+++H Y + L +L + +SL +Y++
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI 407
CG LE++ K+F + F+D A W S+IS + G A+ LFSEM + G SPD A+
Sbjct: 498 CGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAV 557
Query: 408 LSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP-LE 466
L+ CS L GK T I ++ + LV++ + G + A V ++P L+
Sbjct: 558 LTVCSSHPSLPRGK-EIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 467 P 467
P
Sbjct: 617 P 617
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 227/516 (43%), Gaps = 72/516 (13%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
YA CG A +VF I +VV + VM+ Y + AL +F+EM + G +N T
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV---LDE 191
V+ AC + Q+H + K + V LISMY K G + + V LD+
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 192 MPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA---------- 241
+ R+++V N M+ ++Q+ + A+ + M G + D ++ SL+
Sbjct: 415 IQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQV 472
Query: 242 ------------VTNTSSDNVLYVK--------DIFINLEKKSLVSWNVMITVYMKNSMP 281
+T SS LY K +F + K W MI+ + +
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
AI L+ +M PD T A+VL C +L G+ IH Y R + + L ++L
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL 592
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
++MY++CG L+ A++V+D++ D S +SLIS Y G + LF +M SG + D
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDS 652
Query: 402 IAFVAILSACSHS----------------GLLEEGKVYFKQMT--------DD-----YR 432
A +IL A + S GL E V +T DD +
Sbjct: 653 FAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQ 712
Query: 433 IT-PRIEHFACLVDLLGRAGRVDEA---YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG 488
I P + + L+ + G+ +EA Y+++K+ +P++ + +LS+C ++
Sbjct: 713 INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEES 772
Query: 489 LLAADNLLQ---LSPEQSGYYVLLSNIYAKAGRWKE 521
+++++ + PE +YV + + ++GR +E
Sbjct: 773 YFHLNSMVKDYGIEPENR-HYVCMVDALGRSGRLRE 807
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 222/479 (46%), Gaps = 48/479 (10%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y+ G A K+FD I + +VV N+MI Y +R + ++L F +M GF +
Sbjct: 90 LLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEAN 149
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+Y V+ ACS F + +K+ + V + LI ++ K +A V
Sbjct: 150 EISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR 209
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--------- 241
+ +V WN+++AG +N + ++ EM QKPD+ T +S++ A
Sbjct: 210 DSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRF 269
Query: 242 -------VTNTSSDNV--------LYVK--------DIFINLEKKSLVSWNVMITVYMKN 278
V +++V LY K ++F + S+VSW VM++ Y K+
Sbjct: 270 GKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKS 329
Query: 279 SMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLE 338
+ +A++++ +M S VE + T SV+ ACG S + ++H +V + + +
Sbjct: 330 NDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVA 389
Query: 339 NSLIDMYARCGCLEDAQKVF---DKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+LI MY++ G ++ +++VF D ++ +++ + +I+++ + + A+ LF+ M
Sbjct: 390 AALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 396 GISPDHIAFVAILSA--CSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
G+ D + ++LS C + G G + D + + L L + G +
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG------SSLFTLYSKCGSL 501
Query: 454 DEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM--DIGLLAADNLLQLSPEQSGYYVLLS 510
+E+Y + + +P + N W +++S Y + IGL + SP++S +L+
Sbjct: 502 EESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 168/353 (47%), Gaps = 38/353 (10%)
Query: 146 NLRFGLQLHGAMLK-VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMV 204
NLR L +L+ L +++F+ L+S Y G + +A + D +P+ DVVS N M+
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 205 AGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT--------------------- 243
+GY Q+ F+++L +M LG + + + S++ A +
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 244 ----------NTSSDNVLY--VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM 291
+ S N+ + +F + ++ WN +I ++N G DL+ +M
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 292 EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCL 351
+PD+ T +SVL AC L L G+ + V + ++ + +++D+YA+CG +
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHM 301
Query: 352 EDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC 411
+A +VF ++ V SWT ++S Y + +AL +F EM++SG+ ++ +++SAC
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 412 SHSGLL-EEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
++ E +V+ + + + A L+ + ++G +D + V + +
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVA--AALISMYSKSGDIDLSEQVFEDL 412
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 139/302 (46%), Gaps = 22/302 (7%)
Query: 43 YPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVM 102
+P + K +H + + LG L+ Y+ CG AR+V+D + E + V + +
Sbjct: 564 HPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSL 623
Query: 103 IRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRL 162
I Y + D L+FR+MV GF D++ +LKA + SD G Q+H + K+ L
Sbjct: 624 ISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGL 683
Query: 163 DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCRE 222
VG+ L++MY K G + + ++ D+++W +++A YAQ+ + ++AL+V
Sbjct: 684 CTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNL 743
Query: 223 MDDLGQKPDAGTMASLMPAVTNTSSDNVLY------VKDIFINLEKKSLVSWNVMITVYM 276
M + G KPD T ++ A ++ Y VKD I E + V M+
Sbjct: 744 MKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV---CMVDALG 800
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
++ A M ++PDA+ ++L AC +IH VE K+
Sbjct: 801 RSGRLREAESFINNM---HIKPDALVWGTLLAAC----------KIHGEVELGKVAAKKA 847
Query: 337 LE 338
+E
Sbjct: 848 IE 849
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 322 IHEYVERKKLRP-NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTG 380
+ ++ R+ L P ++ L SL+ Y+ G + DA K+FD + DV S +IS Y
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 381 QGCNALALFSEMQNSGISPDHIAFVAILSACS--HSGLLEEGKVYFKQMTDDYRITPRIE 438
+L FS+M G + I++ +++SACS + L E V + Y +E
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSE-LVCCHTIKMGYFFYEVVE 188
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+ L+D+ + R ++AY V + L N W T+++
Sbjct: 189 --SALIDVFSKNLRFEDAYKVFRD-SLSANVYCWNTIIA 224
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/497 (31%), Positives = 259/497 (52%), Gaps = 39/497 (7%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
L +H L+ H + L + + A +VF I NV+ +N MI+ Y
Sbjct: 20 LPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSL 79
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
++L F M + G D YTY +LK+CS +LRFG +HG +++ +
Sbjct: 80 VGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKI 139
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
G++ +Y G + +A+ V DEM R+VV WN M+ G+ + + L + ++M +
Sbjct: 140 RIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSE--- 196
Query: 229 KPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY 288
+S+VSWN MI+ K A++L+
Sbjct: 197 ----------------------------------RSIVSWNSMISSLSKCGRDREALELF 222
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL-LENSLIDMYAR 347
+M +PD T +VLP L L G+ IH E L + + + N+L+D Y +
Sbjct: 223 CEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCK 282
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG-ISPDHIAFVA 406
G LE A +F KM+ R+V SW +LIS + G+G + LF M G ++P+ F+
Sbjct: 283 SGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLG 342
Query: 407 ILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE 466
+L+ CS++G +E G+ F M + +++ R EH+ +VDL+ R+GR+ EA+ +K MP+
Sbjct: 343 VLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVN 402
Query: 467 PNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVR 526
N +WG+LLS+CR + ++ + +AA L+++ P SG YVLLSN+YA+ GRW++V +VR
Sbjct: 403 ANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVR 462
Query: 527 SLMKRRRIRKTPGISNV 543
+LMK+ R+RK+ G S +
Sbjct: 463 TLMKKNRLRKSTGQSTI 479
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 58/370 (15%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
K+ D+ K VH +LI H + I ++ Y + G G A+KVFDE+SERNVV
Sbjct: 110 KSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVV 169
Query: 98 FYNVMIRSYVNN-------------------RWYN------------DALLVFREMVNGG 126
+N+MIR + ++ W + +AL +F EM++ G
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF-VGNGLISMYGKCGCLLEA 185
F PD T VL + L G +H L + VGN L+ Y K G L A
Sbjct: 230 FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAA 289
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ-KPDAGTMASLMPAVTN 244
+ +M RR+VVSWN++++G A N + + +++ M + G+ P+ T ++ +
Sbjct: 290 TAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY 349
Query: 245 TSSDNVLYVKDIF-INLEKKSLVS----WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
T V +++F + +E+ L + + M+ + S G + + ++ V +
Sbjct: 350 TG--QVERGEELFGLMMERFKLEARTEHYGAMVDLM---SRSGRITEAFKFLKNMPVNAN 404
Query: 300 AITCASVLPAC---GDLSALLLGRRIHEYVERKKLRP----NLLLENSLIDMYARCGCLE 352
A S+L AC GD+ + +E K+ P N +L L ++YA G +
Sbjct: 405 AAMWGSLLSACRSHGDVKLAEVA-----AMELVKIEPGNSGNYVL---LSNLYAEEGRWQ 456
Query: 353 DAQKVFDKMK 362
D +KV MK
Sbjct: 457 DVEKVRTLMK 466
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 167/579 (28%), Positives = 291/579 (50%), Gaps = 35/579 (6%)
Query: 28 SPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKV 87
+ V++V L KA Q +I +++H + + + +G L+ Y G+ + +V
Sbjct: 108 TSVLSVVL--KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRV 165
Query: 88 FDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNL 147
F E+ RN V + +I V+ Y + L F EM D YT+ LKAC+ +
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 148 RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGY 207
++G +H ++ L V N L +MY +CG + + + + M RDVVSW S++ Y
Sbjct: 226 KYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY 285
Query: 208 AQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA-------------------------- 241
+ + A+E +M + P+ T AS+ A
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSL 345
Query: 242 -VTNT------SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKS 294
V+N+ + N++ +F + + ++SW+ +I Y + + M +S
Sbjct: 346 SVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405
Query: 295 EVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDA 354
+P AS+L G+++ + GR++H L N + +SLI+MY++CG +++A
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 355 QKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHS 414
+F + D+ S T++I+ Y G+ A+ LF + G PD + F+++L+AC+HS
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 415 GLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGT 474
G L+ G YF M + Y + P EH+ C+VDLL RAGR+ +A +I +M + ++ VW T
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 475 LLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRI 534
LL +C+ +++ G AA+ +L+L P + V L+NIY+ G +E VR MK + +
Sbjct: 586 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
Query: 535 RKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLV 573
K PG S++++ V F++GD HPQS++IY L + V
Sbjct: 646 IKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAV 684
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 185/385 (48%), Gaps = 35/385 (9%)
Query: 72 MRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREM--VNGGFRP 129
+R+ G AR+VFD++ ++V + +I+ YV ++AL++F M V+ P
Sbjct: 47 LRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSP 106
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D VLKAC S N+ +G LH +K L +++VG+ L+ MY + G + ++ V
Sbjct: 107 DTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVF 166
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA-------- 241
EMP R+ V+W +++ G R+ + L EM + D T A + A
Sbjct: 167 SEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVK 226
Query: 242 --------------VTNTSSDNVLY--------VKD---IFINLEKKSLVSWNVMITVYM 276
VT N L ++D +F N+ ++ +VSW +I Y
Sbjct: 227 YGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
+ A++ +++M S+V P+ T AS+ AC LS L+ G ++H V L +L
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ NS++ MY+ CG L A +F M+ RD+ SW+++I Y G G FS M+ SG
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG 406
Query: 397 ISPDHIAFVAILSACSHSGLLEEGK 421
P A ++LS + ++E G+
Sbjct: 407 TKPTDFALASLLSVSGNMAVIEGGR 431
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/559 (29%), Positives = 296/559 (52%), Gaps = 49/559 (8%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYN-DALLVFREMVNG 125
+G + Y+ G AR+VFDE+S ++++ +N ++ + +A+++FR+M+
Sbjct: 211 VGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMRE 270
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G D+ ++ V+ C +L+ Q+HG +K + L VGN L+S Y KCG L
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV--- 242
+ V +M R+VVSW +M++ DDA+ + M G P+ T L+ AV
Sbjct: 331 KSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 243 -------------------TNTSSDN---VLYVK--------DIFINLEKKSLVSWNVMI 272
+ S N LY K F ++ + ++SWN MI
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG---DLSALLLGRRIHEYVERK 329
+ + +N A+ ++L +E P+ T SVL A D+S + G+R H ++ +
Sbjct: 446 SGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDIS-VKQGQRCHAHLLKL 503
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF 389
L ++ ++L+DMYA+ G +++++KVF++M ++ WTS+ISAY G + LF
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLF 563
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
+M ++PD + F+++L+AC+ G++++G F M + Y + P EH++C+VD+LGR
Sbjct: 564 HKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGR 623
Query: 450 AGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLL 509
AGR+ EA +++ ++P P E + ++L SCR++ N+ +G A+ +++ PE SG YV +
Sbjct: 624 AGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQM 683
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGIS-----NVELNSQVHTFLAGDTSHPQSKE 564
NIYA+ W + E+R M+++ + K G S + E + + F +GD SHP+S E
Sbjct: 684 YNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDE 743
Query: 565 IYEELYVLVGKMKELGYVP 583
IY + ++ +M G V
Sbjct: 744 IYRMVEIIGLEMNLEGKVA 762
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 206/445 (46%), Gaps = 49/445 (11%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
+M Y G A +F+ + + +VV +N ++ + +N+ AL M + G D
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFD 173
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+TY L C S+ GLQL ++K L+ +L VGN I+MY + G AR V D
Sbjct: 174 AFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFD 233
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFD-DALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-- 247
EM +D++SWNS+++G +Q F +A+ + R+M G + D + S++ + +
Sbjct: 234 EMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLK 293
Query: 248 --------------------DNVLY-----------VKDIFINLEKKSLVSWNVMITVYM 276
N+L VK +F + ++++VSW MI+
Sbjct: 294 LARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--- 350
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
S +A+ ++L M V P+ +T ++ A + G +IH +
Sbjct: 351 --SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ NS I +YA+ LEDA+K F+ + FR++ SW ++IS + G AL +F
Sbjct: 409 VGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAET 468
Query: 397 ISPDHIAFVAILSACSHS---GLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
+ P+ F ++L+A + + + + + + + P + + L+D+ + G +
Sbjct: 469 M-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNI 525
Query: 454 DEAYDVIKQMPLEPNERVWGTLLSS 478
DE+ V +M + N+ VW +++S+
Sbjct: 526 DESEKVFNEMS-QKNQFVWTSIISA 549
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 223/525 (42%), Gaps = 89/525 (16%)
Query: 84 ARKVFDEISERNVVF-YNVMIRSYVNNRWYNDALLVFREMVNGGF---RPDNYTYPCVLK 139
A K+FD S+RN N I + AL +F+E + G+ D T LK
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 140 ACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVS 199
AC +L+ G Q+HG + V N ++ MY K G A + + + DVVS
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 200 WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMAS----------------LMPAVT 243
WN++++G+ N AL M G DA T ++ L V
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 244 NTSSDNVLYVKDIFINLEKKS-----------------LVSWNVMITVYMKNSMPG-NAI 285
T ++ L V + FI + +S ++SWN +++ + G A+
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 286 DLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
++ M + VE D ++ SV+ C + L L R+IH ++ L + N L+ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
++CG LE + VF +M R+V SWT++IS+ +A+++F M+ G+ P+ + FV
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFV 376
Query: 406 AILSA----------------CSHSGLLEEGKV---------YFKQMTDDYR----ITPR 436
+++A C +G + E V F+ + D + IT R
Sbjct: 377 GLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR 436
Query: 437 -IEHFACLVDLLGRAGRVDEAYDVIKQMPLE--PNERVWGTLLSSCRVYSNMDI--GLLA 491
I + ++ + G EA + E PNE +G++L++ ++ + G
Sbjct: 437 EIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 492 ADNLLQLS----PEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRR 532
+LL+L P S L ++YAK G E +V + M ++
Sbjct: 497 HAHLLKLGLNSCPVVSS---ALLDMYAKRGNIDESEKVFNEMSQK 538
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 275/559 (49%), Gaps = 99/559 (17%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A K+FD + ER+ V Y +I+ Y N +++A+ +FREM N G + T V+ ACS
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
+ L +K++L+ +FV L+ MY C CL +AR + DEMP R++V+WN M
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 204 VAGYAQ-------------------------------NMRFDDALEVCREMDDLGQKPDA 232
+ GY++ + D+AL EM G KP
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSE 305
Query: 233 GTMASLMPAVTNT--SSDNV-----------------------LYV--KDIFINLE---- 261
M L+ A + SS + Y DI + L+
Sbjct: 306 VMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEA 365
Query: 262 --KKSLVSWNVMITVYMKNSM-------------------------------PGNAIDLY 288
K + S N +I ++KN M P A+ L+
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 289 LQM-EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR 347
+M S+V+PDAIT SV A L +L G+R H+Y+ + PN L ++IDMYA+
Sbjct: 426 REMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAK 485
Query: 348 CGCLEDAQKVFDKMK---FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAF 404
CG +E A +F + K ++ W ++I G AL L+S++Q+ I P+ I F
Sbjct: 486 CGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITF 545
Query: 405 VAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP 464
V +LSAC H+GL+E GK YF+ M D+ I P I+H+ C+VDLLG+AGR++EA ++IK+MP
Sbjct: 546 VGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMP 605
Query: 465 LEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTE 524
++ + +WG LLS+ R + N++I LAA L + P G V+LSN+YA AGRW++V
Sbjct: 606 VKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVAL 665
Query: 525 VRSLMKRRRIRKTPGISNV 543
VR M+ R + + S V
Sbjct: 666 VREEMRTRDVEWSRAFSGV 684
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 171/375 (45%), Gaps = 70/375 (18%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y+ G A ++FD+I+E+++V + MI + ++AL+ + EM+ G +P
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG--------------------- 169
+L A + S GLQLHG ++K D F+
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 170 ----------NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEV 219
N LI+ + K G + +AR V D+ +D+ SWN+M++GYAQ++ AL +
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 220 CREMDDLGQ-KPDAGTMASLMPAVTNTSS-------------------DNV------LYV 253
REM Q KPDA TM S+ A+++ S DN+ +Y
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 254 K--------DIF---INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
K +IF N+ ++ WN +I + A+DLY ++ ++P++IT
Sbjct: 485 KCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSIT 544
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
VL AC + LG+ E ++ + P++ ++D+ + G LE+A+++ KM
Sbjct: 545 FVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKM 604
Query: 362 KFR-DVASWTSLISA 375
+ DV W L+SA
Sbjct: 605 PVKADVMIWGMLLSA 619
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 136/627 (21%), Positives = 246/627 (39%), Gaps = 186/627 (29%)
Query: 138 LKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV--------- 188
L +C+ S+++ G Q+H +LK LD N ++ N +++MY KC L +A V
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 189 ----------------------LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
D MP R VS+ +++ GYAQN ++ +A+E+ REM +L
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 227 GQKPDAGTMASLMPAVTNTS-----------------------SDNVLYV---------- 253
G + T+A+++ A ++ S N+L++
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 254 KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV----------------- 296
+ +F + +++LV+WNVM+ Y K + A +L+ Q+ + ++
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 297 --------------EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLI 342
+P + +L A G ++H + ++ L+ ++I
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 343 DMYA-------------------------------RCGCLEDAQKVFDKMKFRDVASWTS 371
YA + G +E A++VFD+ +D+ SW +
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 372 LISAYGMTGQGCNALALFSEM-QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
+IS Y + AL LF EM +S + PD I V++ SA S G LEEGK D
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGK-----RAHD 462
Query: 431 Y----RITPRIEHFACLVDLLGRAGRVDEAYDVIKQ------------------------ 462
Y I P A ++D+ + G ++ A ++ Q
Sbjct: 463 YLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 463 -------------MPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ---LSPEQSGYY 506
+P++PN + +LS+C +++G +++ + P+ +Y
Sbjct: 523 AKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIK-HY 581
Query: 507 VLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGI--------SNVELNSQVHTFLAG-DT 557
+ ++ KAGR +E E+ M + G+ NVE+ T LA D
Sbjct: 582 GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDP 641
Query: 558 SHPQSKEIYEELYVLVGKMKELGYVPE 584
SH K + +Y G+ +++ V E
Sbjct: 642 SHGGCKVMLSNVYADAGRWEDVALVRE 668
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 74/295 (25%)
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ--------- 355
S L +C + + GR+IH V + L N + NS+++MYA+C L DA+
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 356 ----------------------KVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ 393
K+FD M R S+T+LI Y Q A+ LF EM+
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 394 NSGISPDHIAFVAILSACSHSG--------------LLEEGKVY---------------- 423
N GI + + ++SACSH G L EG+V+
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 424 -----FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
F +M + +T + +++ +AG +++A ++ Q+ E + WGT++
Sbjct: 226 DARKLFDEMPERNLVTWNV-----MLNGYSKAGLIEQAEELFDQIT-EKDIVSWGTMIDG 279
Query: 479 CRVYSNMDIGLLAADNLLQ--LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR 531
C + +D L+ +L+ + P + LLS G K + +++KR
Sbjct: 280 CLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/583 (29%), Positives = 296/583 (50%), Gaps = 83/583 (14%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEP---GTARKVFDEISERNVVF------- 98
+ +H +LI +N +L +++ A+A+ P AR VF E + F
Sbjct: 28 VNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPF 87
Query: 99 -YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
+N +I+S+ + + ALL+ M+ G D ++ VLKACS ++ G+Q+HG +
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 158 LKVRLDWNLFVGNGLISMY-------------------------------GKCGCLLEAR 186
K L +LF+ N LI +Y KCG ++ AR
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 187 YVLD----------------------------------EMPRRDVVSWNSMVAGYAQNMR 212
+ D +MP +D++SWNSM+ GY ++ R
Sbjct: 208 ELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGR 267
Query: 213 FDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMI 272
+DA + + D+ + D T A+++ V + K +F + + +V++N M+
Sbjct: 268 IEDA----KGLFDVMPRRDVVTWATMIDGYAKLGF--VHHAKTLFDQMPHRDVVAYNSMM 321
Query: 273 TVYMKNSMPGNAIDLYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
Y++N A++++ MEK S + PD T VLPA L L +H Y+ K+
Sbjct: 322 AGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQF 381
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
L +LIDMY++CG ++ A VF+ ++ + + W ++I + G G +A + +
Sbjct: 382 YLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 441
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
++ + PD I FV +L+ACSHSGL++EG + F+ M ++I PR++H+ C+VD+L R+G
Sbjct: 442 IERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSG 501
Query: 452 RVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSN 511
++ A ++I++MP+EPN+ +W T L++C + + G L A +L+ + YVLLSN
Sbjct: 502 SIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSN 561
Query: 512 IYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLA 554
+YA G WK+V VR++MK R+I K PG S +EL+ +VH F
Sbjct: 562 MYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 282/517 (54%), Gaps = 9/517 (1%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
LG L+ Y G A VFD + E++VV +N++I YV DA+ + + M
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEK 370
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
+ D T ++ A + ++NL+ G ++ ++ + ++ + + ++ MY KCG +++A+
Sbjct: 371 LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAK 430
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS 246
V D +D++ WN+++A YA++ +AL + M G P+ T ++ ++
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 247 SDNVLYVKDIFINLEKK----SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
V KD+F+ ++ +L+SW M+ ++N AI +M++S + P+A +
Sbjct: 491 --QVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFS 548
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLL-LENSLIDMYARCGCLEDAQKVFDKM 361
L AC L++L +GR IH Y+ R +L+ +E SL+DMYA+CG + A+KVF
Sbjct: 549 ITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSK 608
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
+ ++ ++ISAY + G A+AL+ ++ G+ PD+I +LSAC+H+G + +
Sbjct: 609 LYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAI 668
Query: 422 VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRV 481
F + + P +EH+ +VDLL AG ++A +I++MP +P+ R+ +L++SC
Sbjct: 669 EIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNK 728
Query: 482 YSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGIS 541
++ + LL+ PE SG YV +SN YA G W EV ++R +MK + ++K PG S
Sbjct: 729 QRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 788
Query: 542 NVELNSQ--VHTFLAGDTSHPQSKEIYEELYVLVGKM 576
+++ + VH F+A D +H + EI L +L+ M
Sbjct: 789 WIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 248/504 (49%), Gaps = 42/504 (8%)
Query: 26 FQSPVIAVELLGKALDQ---YPDIIALKNVHTKLIYLNSH--ENPSLGIKLMRAYAACGE 80
F++ I E+ G+ L D+ K +H +++ N + KL+ YA C
Sbjct: 63 FRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDA 122
Query: 81 PGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKA 140
A +F ++ RNV + +I AL+ F EM+ PDN+ P V KA
Sbjct: 123 LEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKA 182
Query: 141 CSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSW 200
C RFG +HG ++K L+ +FV + L MYGKCG L +A V DE+P R+ V+W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 201 NSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS------------- 247
N+++ GY QN + ++A+ + +M G +P T+++ + A N
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 248 -----DNVL---------------YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDL 287
DN+L Y + +F + +K +V+WN++I+ Y++ + +AI +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 288 YLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR 347
M +++ D +T A+++ A L LG+ + Y R +++L ++++DMYA+
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI 407
CG + DA+KVFD +D+ W +L++AY +G AL LF MQ G+ P+ I + I
Sbjct: 423 CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 408 LSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP--- 464
+ + +G ++E K F QM I P + + +++ + + G +EA +++M
Sbjct: 483 ILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 465 LEPNERVWGTLLSSCRVYSNMDIG 488
L PN LS+C +++ IG
Sbjct: 542 LRPNAFSITVALSACAHLASLHIG 565
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 238/440 (54%), Gaps = 36/440 (8%)
Query: 103 IRSYVNNRWYNDALLVFREMVNGGFRP-DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR 161
+ SY N + AL +F +M + P D + + LK+C+ + G +H +K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 162 LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR 221
N FVG L+ MYGKC + AR + DE+P+R+ V WN+M++ Y + +A+E+
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 222 EMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMP 281
MD +MP N SS N + +K + + E S
Sbjct: 139 AMD-------------VMP---NESSFNAI-IKGL-VGTEDGSY---------------- 164
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
AI+ Y +M + +P+ IT +++ AC + A L + IH Y R + P+ L++ L
Sbjct: 165 -RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGL 223
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
++ Y RCG + Q VFD M+ RDV +W+SLISAY + G +AL F EM+ + ++PD
Sbjct: 224 VEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
IAF+ +L ACSH+GL +E VYFK+M DY + +H++CLVD+L R GR +EAY VI+
Sbjct: 284 IAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQ 343
Query: 462 QMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKE 521
MP +P + WG LL +CR Y +++ +AA LL + PE YVLL IY GR +E
Sbjct: 344 AMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEE 403
Query: 522 VTEVRSLMKRRRIRKTPGIS 541
+R MK ++ +PG S
Sbjct: 404 AERLRLKMKESGVKVSPGSS 423
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 46/351 (13%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYV--- 107
+VH + N NP +G L+ Y C ARK+FDEI +RN V +N MI Y
Sbjct: 69 SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 108 ----------------NNRWYND--------------ALLVFREMVNGGFRPDNYTYPCV 137
N +N A+ +R+M+ F+P+ T +
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 138 LKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV 197
+ ACS R ++H + ++ + + +GL+ YG+CG ++ + V D M RDV
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 198 VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT--SSDNVLYVKD 255
V+W+S+++ YA + + AL+ +EM+ PD +++ A ++ + + ++Y K
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 256 IFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC---G 311
+ + + S ++ ++ V S G + Y ++ +P A T ++L AC G
Sbjct: 309 MQGDYGLRASKDHYSCLVDVL---SRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
++ + R VE + +LL +Y G E+A+++ KMK
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLLGK----IYMSVGRQEEAERLRLKMK 412
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 18/205 (8%)
Query: 265 LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP-DAITCASVLPACGDLSALLLGRRIH 323
L+S ++ Y A++L+LQM S P DA + L +C +LG +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
+ + N + +L+DMY +C + A+K+FD++ R+ W ++IS Y G+
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLL--EEGK---VYFKQMTDDYRITPRIE 438
A+ L+ M + P+ +F AI+ GL+ E+G + F + ++R P +
Sbjct: 132 EAVELYEAMD---VMPNESSFNAII-----KGLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQM 463
LV G A+ +IK++
Sbjct: 184 TLLALVSACSAIG----AFRLIKEI 204
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 38/259 (14%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
+K +H+ +P L L+ AY CG + VFD + +R+VV ++ +I +Y
Sbjct: 201 IKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYAL 260
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
+ AL F+EM PD+ + VLKACS + GL + R+ +
Sbjct: 261 HGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHA-----GLADEALVYFKRMQGDY-- 313
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
GL + CL+ DV+S + RF++A +V + M +
Sbjct: 314 --GLRASKDHYSCLV------------DVLS---------RVGRFEEAYKVIQAMP---E 347
Query: 229 KPDAGTMASLMPAVTNTSSDNV--LYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
KP A T +L+ A N + + +++ + +E ++ ++ ++ +YM A
Sbjct: 348 KPTAKTWGALLGACRNYGEIELAEIAARELLM-VEPENPANYVLLGKIYMSVGRQEEAER 406
Query: 287 LYLQMEKS--EVEPDAITC 303
L L+M++S +V P + C
Sbjct: 407 LRLKMKESGVKVSPGSSWC 425
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/525 (32%), Positives = 283/525 (53%), Gaps = 21/525 (4%)
Query: 59 LNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLV 118
++S +N ++ Y + A +F E+ ERNVV +N MI Y + + AL +
Sbjct: 103 VDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALEL 162
Query: 119 FREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRL-DWNLFVGNGLISMYG 177
F EM ++ ++KA + + L M + + W V +GL
Sbjct: 163 FDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMV-DGL----A 213
Query: 178 KCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMAS 237
K G + EAR + D MP R+++SWN+M+ GYAQN R D+A D L Q AS
Sbjct: 214 KNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEA-------DQLFQVMPERDFAS 266
Query: 238 LMPAVTNTSSDNVLYVK-DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSE 295
+T + + +F + +K+++SW MIT Y++N A++++ +M
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
V+P+ T S+L AC DL+ L+ G++IH+ + + + N ++ ++L++MY++ G L A+
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 356 KVFDK--MKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
K+FD + RD+ SW S+I+ Y G G A+ ++++M+ G P + ++ +L ACSH
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSH 446
Query: 414 SGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWG 473
+GL+E+G +FK + D + R EH+ CLVDL GRAGR+ + + I + +G
Sbjct: 447 AGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYG 506
Query: 474 TLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRR 533
+LS+C V++ + I +L+ + +G YVL+SNIYA G+ +E E+R MK +
Sbjct: 507 AILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
Query: 534 IRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKE 578
++K PG S V++ Q H F+ GD SHPQ + + L L KM++
Sbjct: 567 LKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 169/386 (43%), Gaps = 36/386 (9%)
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
LI K G + EAR + D +P RDVV+W ++ GY ++ D E D + + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGY---IKLGDMREARELFDRVDSRKN 108
Query: 232 AGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM 291
T +++ + ++ + +F + ++++VSWN MI Y ++ A++L+ +M
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEM--LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 292 -EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV-----------------ERKKL-- 331
E++ V +++ A V D + L R V E ++L
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 332 ---RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
N++ N++I YA+ +++A ++F M RD ASW ++I+ + + A L
Sbjct: 227 CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGL 286
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
F M + I++ +++ + EE F +M D + P + + ++
Sbjct: 287 FDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 449 R-AGRVD--EAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGY 505
AG V+ + + +I + + NE V LL+ + DN L + +
Sbjct: 343 DLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISW 402
Query: 506 YVLLSNIYAKAGRWKEVTEVRSLMKR 531
+++ +YA G KE E+ + M++
Sbjct: 403 NSMIA-VYAHHGHGKEAIEMYNQMRK 427
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 142/336 (42%), Gaps = 47/336 (13%)
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
E D +T V+ L + R E +R R N++ +++ Y R L A+
Sbjct: 74 ERDVVTWTHVITGYIKLGDM---REARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEM 130
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
+F +M R+V SW ++I Y +G+ AL LF EM I +++ +++ A G
Sbjct: 131 LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGR 186
Query: 417 LEEGKVYFKQMTDDYRITPR--IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGT 474
++E F++M PR + + +VD L + G+VDEA + MP E N W
Sbjct: 187 IDEAMNLFERM-------PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP-ERNIISWNA 238
Query: 475 LLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRI 534
+++ + +D AD L Q+ PE+ W T + ++ R +
Sbjct: 239 MITGYAQNNRID----EADQLFQVMPERD------------FASWN--TMITGFIRNREM 280
Query: 535 RKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETD------SA 588
K G+ + V ++ T + ++KE E L V +++ P SA
Sbjct: 281 NKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 589 LHDVEE--EDKEGHL----AVHSEKLAIVFALLNTH 618
D+ E ++ H +VH + + ALLN +
Sbjct: 341 CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
RP + LI + G + +A+K+FD + RDV +WT +I+ Y G A LF
Sbjct: 43 RPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR 102
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
+ + + + + A++S S L ++ F++M + ++ + ++D ++G
Sbjct: 103 VDS---RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS-----WNTMIDGYAQSG 154
Query: 452 RVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGY-YVLLS 510
R+D+A ++ +MP E N W +++ + +D A NL + P + + +
Sbjct: 155 RIDKALELFDEMP-ERNIVSWNSMVKALVQRGRID----EAMNLFERMPRRDVVSWTAMV 209
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRI 534
+ AK G+ E + M R I
Sbjct: 210 DGLAKNGKVDEARRLFDCMPERNI 233
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 287/526 (54%), Gaps = 51/526 (9%)
Query: 83 TARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRPDNYTYPCVLKAC 141
+ARK+FDE+SER+V+ ++V+IRSYV ++ L +F+EMV+ PD T VLKAC
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 142 SCSDNLRFGLQLHGAMLKVRLDW-NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSW 200
+ +++ G +HG ++ D ++FV N LI MY K + A V DE R++VSW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 201 NSMVAGYAQNMRFDDALEVCR-------EMDDL--------------------------- 226
NS++AG+ N R+D+ALE+ E+D++
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 227 -GQKPDAGTMASLMPAVTNTS-SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNA 284
G + + ++SL+ A T+ S D+ V D ++ K +VS + MI+ A
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLD---SMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN-LLLENSLID 343
I ++ M + P+AIT S+L AC + L + H R+ L N + + S++D
Sbjct: 414 ISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVD 470
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
YA+CG +E A++ FD++ +++ SWT +ISAY + G ALALF EM+ G +P+ +
Sbjct: 471 AYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 530
Query: 404 FVAILSACSHSGLLEEGKVYFKQMT-DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
++A LSAC+H GL+++G + FK M +D++ P ++H++C+VD+L RAG +D A ++IK
Sbjct: 531 YLAALSACNHGGLVKKGLMIFKSMVEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKN 588
Query: 463 MP--LEPNERVWGTLLSSCR-VYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRW 519
+P ++ WG +LS CR + + I +L+L P S Y+L S+ +A W
Sbjct: 589 LPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSW 648
Query: 520 KEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEI 565
++V +R L+K R++R G S V + FLAGD E+
Sbjct: 649 EDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSEL 694
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 136/544 (25%), Positives = 239/544 (43%), Gaps = 57/544 (10%)
Query: 10 SKLQALVSSFQKSLAS--FQSPVIAVELLGKALDQYPDIIALKNVH---TKLIYLNSHEN 64
SKLQAL S +++ S ++ V + +A Q+ D V KL +L
Sbjct: 7 SKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQ--- 63
Query: 65 PSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN 124
G + Y CG+ + + FD ++ R+ V +NV++ ++ + + L F ++
Sbjct: 64 ---GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRF-GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
GF P+ T V+ AC +L F G ++HG +++ V N ++ MY L
Sbjct: 121 WGFEPNTSTLVLVIHACR---SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL- 176
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMPAV 242
AR + DEM RDV+SW+ ++ Y Q+ L++ +EM + +PD T+ S++ A
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 243 TNTSSDNV-----------------LYVKDIFINLEKK-----------------SLVSW 268
T +V ++V + I++ K ++VSW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N ++ ++ N A++++ M + VE D +T S+L C L + IH + R
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALAL 388
+ N + +SLID Y C ++DA V D M ++DV S +++IS G+ A+++
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
F M++ +P+ I +++L+ACS S L K I +VD
Sbjct: 417 FCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473
Query: 449 RAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ--LSPEQSGYY 506
+ G ++ A Q+ E N W ++S+ + D L D + Q +P Y
Sbjct: 474 KCGAIEMARRTFDQIT-EKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532
Query: 507 VLLS 510
LS
Sbjct: 533 AALS 536
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 166/348 (47%), Gaps = 43/348 (12%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y+ + +A +VFDE + RN+V +N ++ +V+N+ Y++AL +F MV D
Sbjct: 268 LIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVD 327
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T +L+ C + +HG +++ + N + LI Y C + +A VLD
Sbjct: 328 EVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLD 387
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD-- 248
M +DVVS ++M++G A R D+A+ + M D P+A T+ SL+ A + S+D
Sbjct: 388 SMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACS-VSADLR 443
Query: 249 -----------NVLYVKDI----------------------FINLEKKSLVSWNVMITVY 275
L + DI F + +K+++SW V+I+ Y
Sbjct: 444 TSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAY 503
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
N +P A+ L+ +M++ P+A+T + L AC + G I + + + +P+L
Sbjct: 504 AINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSL 563
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
+ ++DM +R G ++ A ++ + DV + SA+G GC
Sbjct: 564 QHYSCIVDMLSRAGEIDTAVELIKNLP-EDVKAGA---SAWGAILSGC 607
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
S+G ++ AYA CG AR+ FD+I+E+N++ + V+I +Y N + AL +F EM
Sbjct: 463 SVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQK 522
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G+ P+ TY L AC+ ++ GL + +M++ +L + ++ M + G + A
Sbjct: 523 GYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582
Query: 186 RYVLDEMP---RRDVVSWNSMVAG 206
++ +P + +W ++++G
Sbjct: 583 VELIKNLPEDVKAGASAWGAILSG 606
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/594 (29%), Positives = 296/594 (49%), Gaps = 76/594 (12%)
Query: 43 YPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVM 102
+ + + + +H I + L KL+ Y+A A+ + + + + +NV+
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVL 155
Query: 103 IRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRL 162
I SY+ N+ + +++ V++ M++ G R D +TYP V+KAC+ + +G +HG++
Sbjct: 156 IGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSH 215
Query: 163 DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD-------------------------- 196
NL+V N LISMY + G + AR + D M RD
Sbjct: 216 RCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 197 ---------VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS 247
+V+WN++ G + + AL M + + + M + + A ++ +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 248 ---------------------DNV------LYVK--------DIFINLEKKSLVSWNVMI 272
DNV +Y + +F +E SL +WN +I
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV-ERKKL 331
+ + N L +M S P+ IT AS+LP + L G+ H Y+ R+
Sbjct: 396 SGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
+ L+L NSL+DMYA+ G + A++VFD M+ RD ++TSLI YG G+G ALA F +
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKD 515
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M SGI PDH+ VA+LSACSHS L+ EG F +M + I R+EH++C+VDL RAG
Sbjct: 516 MDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAG 575
Query: 452 RVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN-LLQLSPEQSGYYVLLS 510
+D+A D+ +P EP+ + TLL +C ++ N +IG AAD LL+ PE G+Y+LL+
Sbjct: 576 YLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLA 635
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKE 564
++YA G W ++ V++L+ ++K + +E +S+ L G+ + P + +
Sbjct: 636 DMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE----LDGENNKPMNDD 685
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 154/402 (38%), Gaps = 70/402 (17%)
Query: 132 YTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDE 191
Y+ +L C + G QLH + L+++ + L++ Y L EA+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 192 MPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA---------- 241
+ WN ++ Y +N RF +++ V + M G + D T S++ A
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 242 ------VTNTSSDNVLYV-----------------KDIFINLEKKSLVSWNVMITVYMKN 278
+ +S LYV + +F + ++ VSWN +I Y
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 279 SMPGNAIDLYLQMEKSEVEPDAITCASV-------------------------------- 306
G A L +M S VE +T ++
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 307 ---LPACGDLSALLLGRRIHEYVERKKLRPNLL--LENSLIDMYARCGCLEDAQKVFDKM 361
L AC + AL G+ H V R + + + NSLI MY+RC L A VF ++
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
+ +++W S+IS + + L EM SG P+HI +IL + G L+ GK
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 422 VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+ + + + LVD+ ++G + A V M
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
+ AS+L C + + G+++H + L + +L L+ Y+ L++AQ + +
Sbjct: 85 SSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS 144
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
+ W LI +Y + +++++ M + GI D + +++ AC+ G+
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 422 VYFKQMTDDYRITPRIEHFAC--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
V + + R + C L+ + R G+VD A + +M E + W +++
Sbjct: 205 VVHGSIEVS---SHRCNLYVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIIN 258
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 178/594 (29%), Positives = 296/594 (49%), Gaps = 76/594 (12%)
Query: 43 YPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVM 102
+ + + + +H I + L KL+ Y+A A+ + + + + +NV+
Sbjct: 96 FNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVL 155
Query: 103 IRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRL 162
I SY+ N+ + +++ V++ M++ G R D +TYP V+KAC+ + +G +HG++
Sbjct: 156 IGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSH 215
Query: 163 DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD-------------------------- 196
NL+V N LISMY + G + AR + D M RD
Sbjct: 216 RCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDR 275
Query: 197 ---------VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS 247
+V+WN++ G + + AL M + + + M + + A ++ +
Sbjct: 276 MYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGA 335
Query: 248 ---------------------DNV------LYVK--------DIFINLEKKSLVSWNVMI 272
DNV +Y + +F +E SL +WN +I
Sbjct: 336 LKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSII 395
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV-ERKKL 331
+ + N L +M S P+ IT AS+LP + L G+ H Y+ R+
Sbjct: 396 SGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSY 455
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
+ L+L NSL+DMYA+ G + A++VFD M+ RD ++TSLI YG G+G ALA F +
Sbjct: 456 KDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKD 515
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M SGI PDH+ VA+LSACSHS L+ EG F +M + I R+EH++C+VDL RAG
Sbjct: 516 MDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAG 575
Query: 452 RVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN-LLQLSPEQSGYYVLLS 510
+D+A D+ +P EP+ + TLL +C ++ N +IG AAD LL+ PE G+Y+LL+
Sbjct: 576 YLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLA 635
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKE 564
++YA G W ++ V++L+ ++K + +E +S+ L G+ + P + +
Sbjct: 636 DMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSE----LDGENNKPMNDD 685
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 154/402 (38%), Gaps = 70/402 (17%)
Query: 132 YTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDE 191
Y+ +L C + G QLH + L+++ + L++ Y L EA+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 192 MPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA---------- 241
+ WN ++ Y +N RF +++ V + M G + D T S++ A
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 242 ------VTNTSSDNVLYV-----------------KDIFINLEKKSLVSWNVMITVYMKN 278
+ +S LYV + +F + ++ VSWN +I Y
Sbjct: 204 RVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSE 263
Query: 279 SMPGNAIDLYLQMEKSEVEPDAITCASV-------------------------------- 306
G A L +M S VE +T ++
Sbjct: 264 EKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAM 323
Query: 307 ---LPACGDLSALLLGRRIHEYVERKKLRPNLL--LENSLIDMYARCGCLEDAQKVFDKM 361
L AC + AL G+ H V R + + + NSLI MY+RC L A VF ++
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQV 383
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
+ +++W S+IS + + L EM SG P+HI +IL + G L+ GK
Sbjct: 384 EANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 422 VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+ + + + LVD+ ++G + A V M
Sbjct: 444 EFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
+ AS+L C + + G+++H + L + +L L+ Y+ L++AQ + +
Sbjct: 85 SSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS 144
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
+ W LI +Y + +++++ M + GI D + +++ AC+ G+
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 422 VYFKQMTDDYRITPRIEHFAC--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
V + + R + C L+ + R G+VD A + +M E + W +++
Sbjct: 205 VVHGSIEVS---SHRCNLYVCNALISMYKRFGKVDVARRLFDRMS-ERDAVSWNAIIN 258
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/519 (30%), Positives = 272/519 (52%), Gaps = 38/519 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ YA RKVFDE+ R+ V Y +I S + +A+ + +EM GF P
Sbjct: 88 LISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPK 147
Query: 131 NYTYPCVLKACS-CSDNLRFGLQLHGAML-KVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
+ +L C+ + + H +L R+ ++ + L+ MY K A +V
Sbjct: 148 SELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHV 207
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT--NTS 246
D+M ++ VSW +M++G N ++ +++ R M +P+ T+ S++PA N
Sbjct: 208 FDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYG 267
Query: 247 SD--------------------------------NVLYVKDIFINLEKKSLVSWNVMITV 274
S NV + +F + + +V W+ MI+
Sbjct: 268 SSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISG 327
Query: 275 YMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN 334
Y + ++L QM K +E +++T +++ AC + + L +H + + +
Sbjct: 328 YAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSH 387
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
+LL N+LIDMYA+CG L A++VF ++ +D+ SW+S+I+AYG+ G G AL +F M
Sbjct: 388 ILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK 447
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVD 454
G D +AF+AILSAC+H+GL+EE + F Q Y + +EH+AC ++LLGR G++D
Sbjct: 448 GGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ-AGKYHMPVTLEHYACYINLLGRFGKID 506
Query: 455 EAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDI-GLLAADNLLQLSPEQSGYYVLLSNIY 513
+A++V MP++P+ R+W +LLS+C + +D+ G + A+ L++ P+ YVLLS I+
Sbjct: 507 DAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIH 566
Query: 514 AKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF 552
++G + EVR +M+RR++ K G S +E Q+ +
Sbjct: 567 TESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDY 605
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 193/414 (46%), Gaps = 40/414 (9%)
Query: 103 IRSYVNNRWYNDALLVFREMVNG-GFRPDNYTYPCVLKACSCSDN-LRFGLQLHGAMLKV 160
++ V++++Y++AL +++ ++ G P V+KAC+ G QLH LK
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 161 RLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVC 220
D + V N LISMY K R V DEM RD VS+ S++ Q+ +A+++
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 221 REMDDLGQKPDAGTMASLMPAVTNTSSDNV---------------------------LYV 253
+EM G P + +ASL+ T S + +Y+
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 254 K--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
K +F +E K+ VSW MI+ + N +DL+ M++ + P+ +T S
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLS 256
Query: 306 VLPACGDLS-ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
VLPAC +L+ L + IH + R + L + + MY RCG + ++ +F+ K R
Sbjct: 257 VLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 365 DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYF 424
DV W+S+IS Y TG + L ++M+ GI + + +AI+SAC++S LL
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 425 KQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
Q+ I L+D+ + G + A +V ++ E + W +++++
Sbjct: 377 SQIL-KCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINA 428
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 152/358 (42%), Gaps = 41/358 (11%)
Query: 62 HENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFRE 121
E+ L L+ Y + A VFD++ +N V + MI V N+ Y + +FR
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 122 MVNGGFRPDNYTYPCVLKACSCSDNLRFGLQL----HGAMLKVRLDWNLFVGNGLISMYG 177
M RP+ T VL AC L +G L HG + + + ++MY
Sbjct: 242 MQRENLRPNRVTLLSVLPACV---ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 178 KCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMAS 237
+CG + +R + + RDVV W+SM++GYA+ + + + +M G + ++ T+ +
Sbjct: 299 RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLA 358
Query: 238 LMPAVTNTS---------------------------------SDNVLYVKDIFINLEKKS 264
++ A TN++ ++ +++F L +K
Sbjct: 359 IVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKD 418
Query: 265 LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE 324
LVSW+ MI Y + A++++ M K E D + ++L AC + + I
Sbjct: 419 LVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT 478
Query: 325 YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WTSLISAYGMTGQ 381
+ + L I++ R G ++DA +V M + A W+SL+SA G+
Sbjct: 479 QAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGR 536
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
+K +H H + L M Y CG +R +F+ R+VV ++ MI Y
Sbjct: 271 VKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAE 330
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
++ + + +M G ++ T ++ AC+ S L F +H +LK ++ +
Sbjct: 331 TGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILL 390
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
GN LI MY KCG L AR V E+ +D+VSW+SM+ Y + +ALE+ + M G
Sbjct: 391 GNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGH 450
Query: 229 KPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK----SLVSWNVMITVYMKNSMPGNA 284
+ D +++ A + V + IF K +L + I + + +A
Sbjct: 451 EVDDMAFLAILSACNHAGL--VEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDA 508
Query: 285 IDLYLQMEKSEVEPDAITCASVLPAC 310
++ + M ++P A +S+L AC
Sbjct: 509 FEVTINM---PMKPSARIWSSLLSAC 531
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 305 SVLPACG-DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
SV+ AC LLG ++H + + ++ NSLI MYA+ +KVFD+M
Sbjct: 51 SVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLH 110
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE-GKV 422
RD S+ S+I++ G A+ L EM G P ++L+ C+ G + ++
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
+ + D R+ + LVD+ + A+ V QM ++ NE W ++S C
Sbjct: 171 FHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVAN 229
Query: 483 SNMDIGL 489
N ++G+
Sbjct: 230 QNYEMGV 236
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 1/167 (0%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VH++++ + LG L+ YA CG AR+VF E++E+++V ++ MI +Y +
Sbjct: 374 TVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHG 433
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
++AL +F+ M+ GG D+ + +L AC+ + + + K + L
Sbjct: 434 HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYA 493
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVS-WNSMVAGYAQNMRFDDA 216
I++ G+ G + +A V MP + W+S+++ + R D A
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 275 bits (703), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 170/606 (28%), Positives = 310/606 (51%), Gaps = 52/606 (8%)
Query: 7 RNISKLQALVSSFQKS--LASFQSPV---IAVELLGKALDQYP----------DIIALKN 51
RN+ AL S++ ++ AS+ P+ +A E + + D++ +
Sbjct: 161 RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSS 220
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
+++++I L +N + ++ Y++CG+ +AR++FD ++ R+ V +N MI + N
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDK 280
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
D L+ FR M+ G P +TY VL CS + G +H ++ +L + N
Sbjct: 281 IEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ-KP 230
L+ MY CG + EA YV + ++VSWNS+++G ++N + A+ + R + + +P
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRP 400
Query: 231 DAGTMASLMPA----------------VTNTSSDNVLYV-----------------KDIF 257
D T ++ + A VT + ++V + +F
Sbjct: 401 DEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVF 460
Query: 258 INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
++++ +V W MI + + A+ +++M + + D + +SV+ AC D++ L
Sbjct: 461 DVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLR 520
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
G H R + + +L+DMY + G E A+ +F D+ W S++ AY
Sbjct: 521 QGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYS 580
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRI 437
G AL+ F ++ +G PD + ++++L+ACSH G +GK + QM + I
Sbjct: 581 QHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGF 639
Query: 438 EHFACLVDLLGRAGRVDEAYDVIKQMPLEPNE-RVWGTLLSSCRVYSNMDIGLLAADNLL 496
+H++C+V+L+ +AG VDEA ++I+Q P N+ +W TLLS+C N+ IGL AA+ +L
Sbjct: 640 KHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQIL 699
Query: 497 QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL-NSQVHTFLAG 555
+L PE + ++LLSN+YA GRW++V E+R ++ K PG+S +E+ N+ F +G
Sbjct: 700 KLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSG 759
Query: 556 DTSHPQ 561
D S+P+
Sbjct: 760 DQSNPE 765
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 217/485 (44%), Gaps = 39/485 (8%)
Query: 63 ENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN-RWYNDALLVFRE 121
E+P L+ Y CG ARKVFD++ RNVV YN + +Y N + + A +
Sbjct: 130 ESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTH 189
Query: 122 MVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGC 181
M +P++ T+ +++ C+ +++ G L+ ++K+ N+ V ++ MY CG
Sbjct: 190 MAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGD 249
Query: 182 LLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
L AR + D + RD V+WN+M+ G +N + +D L R M G P T + ++
Sbjct: 250 LESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNG 309
Query: 242 VTNTSS----------------------DNVLY-----------VKDIFINLEKKSLVSW 268
+ S DN L +F + +LVSW
Sbjct: 310 CSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSW 369
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVE 327
N +I+ +N A+ +Y ++ + S PD T ++ + A + + G+ +H V
Sbjct: 370 NSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT 429
Query: 328 RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALA 387
+ ++ + +L+ MY + E AQKVFD MK RDV WT +I + G A+
Sbjct: 430 KLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQ 489
Query: 388 LFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLL 447
F EM D + +++ ACS +L +G+V F + + LVD+
Sbjct: 490 FFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEV-FHCLAIRTGFDCVMSVCGALVDMY 548
Query: 448 GRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ--LSPEQSGY 505
G+ G+ + A + I + P+ + W ++L + + ++ L + +L+ P+ Y
Sbjct: 549 GKNGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607
Query: 506 YVLLS 510
LL+
Sbjct: 608 LSLLA 612
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 181/410 (44%), Gaps = 44/410 (10%)
Query: 63 ENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV--FYNVMIRSYVN-NRWYNDALLVF 119
E P L+ Y C ARKVFD++ +RN+V F + YV+ + ++
Sbjct: 20 EYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKL 79
Query: 120 REMVNGGFRPDNYTYPCVL---KACSCSDNLRFGLQLHGAMLKV---RLDWNLFVGNGLI 173
F P N V+ + C L+ Q+H +L + + N LI
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 174 SMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDD-ALEVCREMDDLGQKPDA 232
SMY +CG L +AR V D+MP R+VVS+N++ + Y++N F A + M KP++
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 233 GTMAS-----------LMPAVTNTS------SDNVLY----------------VKDIFIN 259
T S LM + N+ SDNV+ + IF
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 260 LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
+ + V+WN MI +KN + + + M S V+P T + VL C L + LG
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMT 379
+ IH + +L L+N+L+DMY CG + +A VF ++ ++ SW S+IS
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 380 GQGCNALALFSE-MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
G G A+ ++ ++ S PD F A +SA + GK+ Q+T
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT 429
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 178/394 (45%), Gaps = 47/394 (11%)
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVA------------------GYA 208
+ N LISMY +C L +AR V D+MP+R++V+ + A G
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTM--------ASLMPAVTNTSSDN--------VLY 252
Q + F E+ + +L +K + T+ A ++ A ++++ +Y
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 253 VK--------DIFINLEKKSLVSWNVMITVYMKN-SMPGNAIDLYLQMEKSEVEPDAITC 303
V+ +F + +++VS+N + + Y +N A L M V+P++ T
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
S++ C L +L+G ++ + + N++++ S++ MY+ CG LE A+++FD +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK-V 422
RD +W ++I + + L F M SG+ P + +L+ CS G GK +
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
+ + + D +++ L+D+ G + EA+ V ++ PN W +++S C
Sbjct: 323 HARIIVSDSLADLPLDN--ALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSEN 379
Query: 483 SNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKA 516
+ +L LL++S + Y + I A A
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATA 413
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 271/514 (52%), Gaps = 47/514 (9%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
S+ LM Y+ CGE A ++F I +R+VV ++ MI SY +++A+ +FR+M+
Sbjct: 336 SVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI 395
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
+P+ T VL+ C+ R G +H +K ++ L +ISMY KCG A
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPA 455
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
+ +P +D V++N++ GY Q + A +V + M G PD+ TM ++
Sbjct: 456 LKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFC 515
Query: 246 SS----------------DNVLYVKDIFINL------------------EKKSLVSWNVM 271
S D+ +V IN+ +KS VSWN+M
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 575
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
+ Y+ + A+ + QM+ + +P+A+T +++ A +LSAL +G +H + +
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF 635
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
+ NSL+DMYA+CG +E ++K F ++ + + SW +++SAY G A++LF
Sbjct: 636 CSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLS 695
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
MQ + + PD ++F+++LSAC H+GL+EEGK F++M + ++I +EH+AC+VDLLG+AG
Sbjct: 696 MQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAG 755
Query: 452 RVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSN 511
EA +++++M ++ + VWG LL+S R++ N+ + A L++L P +
Sbjct: 756 LFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH------ 809
Query: 512 IYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
Y++ R EV V RI+K P S +E+
Sbjct: 810 -YSQDRRLGEVNNV------SRIKKVPACSWIEV 836
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 212/430 (49%), Gaps = 35/430 (8%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFR 128
+L+ AY+ +R +FD + + VV +N MIR Y + +AL F M G
Sbjct: 38 QLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGID 97
Query: 129 PDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
PD Y++ LKAC+ S + + GL++H + ++ L+ ++++G L+ MY K L+ AR V
Sbjct: 98 PDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQV 157
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD 248
D+M +DVV+WN+MV+G AQN AL + +M D ++ +L+PAV+
Sbjct: 158 FDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKS 217
Query: 249 NV------------------------------LYVKD-IFINLEKKSLVSWNVMITVYMK 277
+V LY + +F + +K SW M+ Y
Sbjct: 218 DVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAH 277
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
N ++L+ M +V + + AS L A + L+ G IH+Y ++ L ++ +
Sbjct: 278 NGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
SL+ MY++CG LE A+++F ++ RDV SW+++I++Y GQ A++LF +M I
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHI 397
Query: 398 SPDHIAFVAILSACSHSGLLEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
P+ + ++L C+ GK ++ + D I +E ++ + + GR A
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD--IESELETATAVISMYAKCGRFSPA 455
Query: 457 YDVIKQMPLE 466
+++P++
Sbjct: 456 LKAFERLPIK 465
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/557 (23%), Positives = 230/557 (41%), Gaps = 82/557 (14%)
Query: 41 DQYPDIIALK------------NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVF 88
D+Y ALK +H + + + +G L+ Y + +AR+VF
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 89 DEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLR 148
D++ ++VV +N M+ N + ALL+F +M + D+ + ++ A S +
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSD 218
Query: 149 FGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYA 208
LHG L ++ + +GLI MY C L A V +E+ R+D SW +M+A YA
Sbjct: 219 VCRCLHG--LVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 209 QNMRFDDALEVCREMDDLGQK-------------------------PDAGTMASLMPAVT 243
N F++ LE+ M + + D L+ V+
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 244 NTSSDNVLYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
+S +Y K +FIN+E + +VSW+ MI Y + AI L+ M +
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
++P+A+T SVL C ++A LG+ IH Y + + L ++I MYA+CG A
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL 456
Query: 356 KVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
K F+++ +D ++ +L Y G A ++ M+ G+ PD V +L C+
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCS 516
Query: 416 LLEEGKVYFKQMTDD------------YRITPRIEHFACLVDLLGRA------------- 450
G + Q+ + + + A + L +
Sbjct: 517 DYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMM 576
Query: 451 ------GRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMDIGLLAADNLLQLS-P 500
G+ +EA +QM +E PN + ++ + S + +G+ +L+Q
Sbjct: 577 NGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFC 636
Query: 501 EQSGYYVLLSNIYAKAG 517
Q+ L ++YAK G
Sbjct: 637 SQTPVGNSLVDMYAKCG 653
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 171/366 (46%), Gaps = 38/366 (10%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K++H I + ++ YA CG A K F+ + ++ V +N + + Y
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQI 480
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACS-CSDNLRFGLQLHGAMLKVRLDWNLFV 168
N A V++ M G PD+ T +L+ C+ CSD R G ++G ++K D V
Sbjct: 481 GDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYAR-GSCVYGQIIKHGFDSECHV 539
Query: 169 GNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
+ LI+M+ KC L A + D+ + VSWN M+ GY + + ++A+ R+M
Sbjct: 540 AHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK 599
Query: 228 QKPDAGTMASLMPAVTNTSSDNV-------------------------LYVK-------- 254
+P+A T +++ A S+ V +Y K
Sbjct: 600 FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSE 659
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
FI + K +VSWN M++ Y + + A+ L+L M+++E++PD+++ SVL AC
Sbjct: 660 KCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAG 719
Query: 315 ALLLGRRIHEYV-ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSL 372
+ G+RI E + ER K+ + ++D+ + G +A ++ +M+ + V W +L
Sbjct: 720 LVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGAL 779
Query: 373 ISAYGM 378
+++ M
Sbjct: 780 LNSSRM 785
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 13 QALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLM 72
+A+ + Q + FQ + + +A + + +VH+ LI +G L+
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLV 646
Query: 73 RAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNY 132
YA CG ++ K F EIS + +V +N M+ +Y + + A+ +F M +PD+
Sbjct: 647 DMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSV 706
Query: 133 TYPCVLKAC 141
++ VL AC
Sbjct: 707 SFLSVLSAC 715
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 258/502 (51%), Gaps = 34/502 (6%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
Y+ G P A F E+ + ++ + +I S + ++ +F EM N G PD
Sbjct: 275 YSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVI 334
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
C++ + G HG +++ + V N L+SMY K L A + +
Sbjct: 335 SCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE 394
Query: 195 R-DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA------------ 241
+ +WN+M+ GY + +E+ R++ +LG + D+ + S++ +
Sbjct: 395 EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS 454
Query: 242 ----VTNTSSDNVLYVKDIFINLEKK----------------SLVSWNVMITVYMKNSMP 281
V TS D + V + I+L K ++++WN MI Y+
Sbjct: 455 LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQS 514
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
AI L+ +M +P +IT ++L AC + +L G+ IH Y+ + NL L +L
Sbjct: 515 EKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAAL 574
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
IDMYA+CG LE ++++FD +D W +IS YGM G +A+ALF +M+ S + P
Sbjct: 575 IDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTG 634
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
F+A+LSAC+H+GL+E+GK F +M Y + P ++H++CLVDLL R+G ++EA +
Sbjct: 635 PTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVM 693
Query: 462 QMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKE 521
MP P+ +WGTLLSSC + ++G+ A+ + P+ GYY++L+N+Y+ AG+W+E
Sbjct: 694 SMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEE 753
Query: 522 VTEVRSLMKRRRIRKTPGISNV 543
R +M+ + K G S V
Sbjct: 754 AERAREMMRESGVGKRAGHSVV 775
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/519 (25%), Positives = 235/519 (45%), Gaps = 58/519 (11%)
Query: 1 MKPPLSRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLN 60
+KP L + KL + S AS+ I+V L DQ + +L+ + +I
Sbjct: 6 LKPNLVVTLRKLSS-------SSASYVDRHISVILC----DQSLSLESLRKHNALIITGG 54
Query: 61 SHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR 120
EN + KL+ +YA+ G+P + +VF ++ R++ +N +I+++ +N Y +L F
Sbjct: 55 LSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFF 114
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNLFVGNGLISMYGKC 179
M+ G PD++T P V+ AC+ G +HG +LK D N VG + Y KC
Sbjct: 115 SMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKC 174
Query: 180 GCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ---KPDAGTMA 236
G L +A V DEMP RDVV+W ++++G+ QN + L +M G KP+ T+
Sbjct: 175 GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLE 234
Query: 237 SLMPAVTN-------------------------TSSDNVLYVKD--------IFINLEKK 263
A +N SS Y K F L +
Sbjct: 235 CGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDE 294
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
+ SW +I ++ + D++ +M+ + PD + + ++ G + + G+ H
Sbjct: 295 DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLISAYGMTGQG 382
+V R + + NSL+ MY + L A+K+F ++ + +W +++ YG
Sbjct: 355 GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK---VYFKQMTDDYRITPRIEH 439
+ LF ++QN GI D + +++S+CSH G + GK Y + + D I+
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV---- 470
Query: 440 FACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
L+DL G+ G + A+ + + + N W +++S
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCEA--DTNVITWNAMIAS 507
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 55 KLIYLNSHE-NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYN 113
+ I HE N SL L+ YA CG +R++FD ++++ V +NVMI Y +
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616
Query: 114 DALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLI 173
A+ +F +M +P T+ +L AC+ + + G +L M + + NL + L+
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLV 676
Query: 174 SMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFD 214
+ + G L EA + MP D V W ++++ + F+
Sbjct: 677 DLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFE 718
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/489 (31%), Positives = 247/489 (50%), Gaps = 78/489 (15%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVL 138
G +A KVF E+ E+NVV + MI Y+ N+ A F P+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD------LSPER------- 88
Query: 139 KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV 198
++ + N +IS Y + G +LEAR + D+MP RDV+
Sbjct: 89 --------------------------DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVM 122
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFI 258
SWN+++ GYA +E C +F
Sbjct: 123 SWNTVLEGYAN----IGDMEACER---------------------------------VFD 145
Query: 259 NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCASVLPACGDLSALL 317
++ ++++ SWN +I Y +N + + +M ++ V P+ T VL AC L A
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 318 LGRRIHEYVERKKL-RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAY 376
G+ +H+Y E + ++ ++N+LIDMY +CG +E A +VF +K RD+ SW ++I+
Sbjct: 206 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGL 265
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
G G AL LF EM+NSGISPD + FV +L AC H GL+E+G YF M D+ I P
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 325
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL 496
IEH C+VDLL RAG + +A + I +MP++ + +W TLL + +VY +DIG +A + L+
Sbjct: 326 IEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI 385
Query: 497 QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGD 556
+L P +V+LSNIY AGR+ + ++ M+ +K G+S +E + + F +
Sbjct: 386 KLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSG 445
Query: 557 TSHPQSKEI 565
HP+++E+
Sbjct: 446 EKHPRTEEL 454
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 23/308 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-GGFRP 129
++ YA G+ +VFD++ ERNV +N +I+ Y N ++ L F+ MV+ G P
Sbjct: 127 VLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVP 186
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLH--GAMLKV-RLDWNLFVGNGLISMYGKCGCLLEAR 186
++ T VL AC+ FG +H G L ++D N V N LI MYGKCG + A
Sbjct: 187 NDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVN--VKNALIDMYGKCGAIEIAM 244
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS 246
V + RRD++SWN+M+ G A + +AL + EM + G PD T ++ A +
Sbjct: 245 EVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMG 304
Query: 247 --SDNVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
D + Y +F + + ++ + + A++ + K V+ DA+
Sbjct: 305 LVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEF---INKMPVKADAVIW 361
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRP----NLLLENSLIDMYARCGCLEDAQKVFD 359
A++L A + +G E E KL P N ++ L ++Y G +DA ++
Sbjct: 362 ATLLGASKVYKKVDIGEVALE--ELIKLEPRNPANFVM---LSNIYGDAGRFDDAARL-- 414
Query: 360 KMKFRDVA 367
K+ RD
Sbjct: 415 KVAMRDTG 422
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 273/547 (49%), Gaps = 49/547 (8%)
Query: 36 LGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERN 95
L +LD D+ K H ++ + + L KL++AY E A K+FDE+ RN
Sbjct: 45 LSASLDHLSDV---KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRN 101
Query: 96 VVFYNVMIRSYV-----NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFG 150
+V +N++I + N + ++ D+ ++ +++ C+ S N++ G
Sbjct: 102 IVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAG 161
Query: 151 LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
+QLH M+K L+ + F L+ YGKCG ++EAR V + + RD+V WN++V+ Y N
Sbjct: 162 IQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLN 221
Query: 211 MRFDDALEVCREM--DDLGQKPDAGTMASLM------------------------PAVTN 244
D+A + + M D + D T +SL+ P T
Sbjct: 222 GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATA 281
Query: 245 -----TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
S+++ ++ F ++ +++VSWN MI + +N A+ L+ QM ++PD
Sbjct: 282 LLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPD 341
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD 359
+T ASVL +C SA+ +++ V +K L + NSLI Y+R G L +A F
Sbjct: 342 ELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFH 401
Query: 360 KMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE 419
++ D+ SWTS+I A G +L +F M + PD I F+ +LSACSH GL++E
Sbjct: 402 SIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQE 460
Query: 420 GKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
G FK+MT+ Y+I EH+ CL+DLLGRAG +DEA DV+ MP EP+ C
Sbjct: 461 GLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGC 520
Query: 480 RVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIR---- 535
++ + A LL++ P + Y +LSN Y G W + +L+++R R
Sbjct: 521 NIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQA----ALLRKRERRNCYN 576
Query: 536 -KTPGIS 541
KTPG S
Sbjct: 577 PKTPGCS 583
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/497 (32%), Positives = 254/497 (51%), Gaps = 83/497 (16%)
Query: 125 GGFRPDNYTYP----CVLKACSCS-DNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKC 179
GG R +P +L+AC+C + G LH +K + ++ VG+ LISMYGKC
Sbjct: 35 GGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKC 94
Query: 180 GCLLEARYVLDEMPRRDVVSWNSMVA--------------------------------GY 207
GC++ AR V DEMP R+V +WN+M+ GY
Sbjct: 95 GCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGY 154
Query: 208 AQNMRFDDALEVC-----------------------REMDD----LGQKPDAGTMA-SLM 239
+ + + A E+ R+M+D P+ SLM
Sbjct: 155 GKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLM 214
Query: 240 PAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
+ D V + IF + + LV WN +I Y +N +AID + M+ EPD
Sbjct: 215 MSGYFRIGD-VHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD 359
A+T +S+L AC L +GR +H + + + N + N+LIDMYA+CG LE+A VF+
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 360 KMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE 419
+ R VA S+IS + G+G AL +FS M++ + PD I F+A+L+AC H G L E
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME 393
Query: 420 GKVYFKQM-TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
G F +M T D + P ++HF CL+ LLGR+G++ EAY ++K+M ++PN+ V G LL +
Sbjct: 394 GLKIFSEMKTQD--VKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGA 451
Query: 479 CRVYSNMDIGLLAADNLLQLSPEQSG---------YYVLLSNIYAKAGRWKEVTEVRSLM 529
C+V+ + ++ A+ ++++ E +G + +SN+YA RW+ +R M
Sbjct: 452 CKVHMDTEM----AEQVMKI-IETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEM 506
Query: 530 KRRRIRKTPGISNVELN 546
++R + K+PG+S++ L
Sbjct: 507 EKRGLEKSPGLSSLVLT 523
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 176/389 (45%), Gaps = 77/389 (19%)
Query: 44 PDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMI 103
P ++ K +H++ I + +G L+ Y CG +ARKVFDE+ ERNV +N MI
Sbjct: 60 PRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMI 119
Query: 104 RSYVNNRWYNDALL---------------VFREMVNG-GFRPDNYTYPCVLKACSCSDNL 147
Y++N DA+L + EM+ G G R + + KA + +
Sbjct: 120 GGYMSN---GDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIE------IEKARELFERM 170
Query: 148 RFGL---QLHGAMLKVRL----------------DWNLFVGNGLISMYGKCGCLLEARYV 188
F L + ML V + + N FV + ++S Y + G + EAR +
Sbjct: 171 PFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAI 230
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD 248
+ RD+V WN+++AGYAQN DDA++ M G +PDA T++S++ A +
Sbjct: 231 FYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRL 290
Query: 249 NV-------------------------LYVK--------DIFINLEKKSLVSWNVMITVY 275
+V +Y K +F ++ +S+ N MI+
Sbjct: 291 DVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCL 350
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+ A++++ ME +++PD IT +VL AC L+ G +I ++ + ++PN+
Sbjct: 351 AIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNV 410
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFR 364
LI + R G L++A ++ +M +
Sbjct: 411 KHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 141/301 (46%), Gaps = 8/301 (2%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
+M Y G+ AR +F + R++V +N +I Y N + +DA+ F M G+ PD
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T +L AC+ S L G ++H + ++ N FV N LI MY KCG L A V +
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SD 248
+ R V NSM++ A + + +ALE+ M+ L KPD T +++ A + +
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME 393
Query: 249 NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLP 308
+ ++ K ++ + +I + ++ G + Y +++ V+P+ ++L
Sbjct: 394 GLKIFSEMKTQDVKPNVKHFGCLIHLLGRS---GKLKEAYRLVKEMHVKPNDTVLGALLG 450
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLEN---SLIDMYARCGCLEDAQKVFDKMKFRD 365
AC + ++ + +E N EN S+ ++YA + A+ + +M+ R
Sbjct: 451 ACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRG 510
Query: 366 V 366
+
Sbjct: 511 L 511
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%)
Query: 14 ALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMR 73
A+ + F ++ + V + A Q + + VH+ + + N + L+
Sbjct: 258 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALID 317
Query: 74 AYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYT 133
YA CG+ A VF+ IS R+V N MI + +AL +F M + +PD T
Sbjct: 318 MYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
+ VL AC L GL++ M + N+ LI + G+ G L EA ++ EM
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 265/525 (50%), Gaps = 50/525 (9%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
K ++ I L VH +LI + + S I+L+++ + G+ ++ I + +
Sbjct: 27 KLVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LY 84
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY----PCVLKACSCSDNLRFGLQL 153
N + ++Y+ + AL + +++ GF PD+YT+ C+ K C C D+ G
Sbjct: 85 CANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTC-CVDS---GKMC 140
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRF 213
HG +K D L V N L+ MY CG L A+ + E+P+RD+VSWNS++AG +N
Sbjct: 141 HGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRN--- 197
Query: 214 DDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMIT 273
+VL +F + K+++SWN+MI+
Sbjct: 198 ----------------------------------GDVLAAHKLFDEMPDKNIISWNIMIS 223
Query: 274 VYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP 333
Y+ + PG +I L+ +M ++ + + T +L ACG + L GR +H + R L
Sbjct: 224 AYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNS 283
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ 393
+++++ +LIDMY +C + A+++FD + R+ +W +I A+ + G+ L LF M
Sbjct: 284 SVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMI 343
Query: 394 NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
N + PD + FV +L C+ +GL+ +G+ Y+ M D+++I P H C+ +L AG
Sbjct: 344 NGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFP 403
Query: 454 DEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLS 510
+EA + +K +P E P W LLSS R N +G A +L++ P YY LL
Sbjct: 404 EEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLM 463
Query: 511 NIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
NIY+ GRW++V VR ++K R+I + PG V+L VH G
Sbjct: 464 NIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 24 ASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGT 83
A FQ + LL A + + ++VH LI + + + L+ Y C E G
Sbjct: 244 AGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGL 303
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
AR++FD +S RN V +NVMI ++ + L +F M+NG RPD T+ VL C+
Sbjct: 304 ARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCAR 363
Query: 144 SDNLRFGLQLHGAML-KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
+ + G + M+ + ++ N + ++Y G EA L +P DV ++
Sbjct: 364 AGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPEST 423
Query: 203 MVAGYAQNMRF 213
A + RF
Sbjct: 424 KWANLLSSSRF 434
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 271/503 (53%), Gaps = 46/503 (9%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A KVFDEI E +V+ +I +V + +A F+ ++ G RP+ +T+ V+ + +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
S +++ G QLH LK+ L N+FVG+ +++ Y K L +AR D+ +VVS ++
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
++GY + F++AL + R M + +
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPE-------------------------------------R 188
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCASVLPACGDLSALLLGRRI 322
S+V+WN +I + + A++ ++ M + V P+ T + A ++++ G+ I
Sbjct: 189 SVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSI 248
Query: 323 HE-YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK--FRDVASWTSLISAYGMT 379
H ++ R N+ + NSLI Y++CG +ED+ F+K++ R++ SW S+I Y
Sbjct: 249 HACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHN 308
Query: 380 GQGCNALALFSEM-QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP--- 435
G+G A+A+F +M +++ + P+++ + +L AC+H+GL++EG +YF + +DY P
Sbjct: 309 GRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLL 367
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
+EH+AC+VD+L R+GR EA ++IK MPL+P W LL C+++SN + LAA +
Sbjct: 368 ELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKI 427
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
L+L P YV+LSN Y+ W+ V+ +R MK +++ G S +E+ Q+ F+
Sbjct: 428 LELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNA 487
Query: 556 DTSHPQSKEIYEELYVLVGKMKE 578
D ++ E+Y L ++ ++E
Sbjct: 488 DKNNELKDEVYRMLALVSQHLEE 510
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 158/391 (40%), Gaps = 70/391 (17%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
D+ K +H + + N +G ++ Y AR+ FD+ + NVV +I
Sbjct: 108 DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLIS 167
Query: 105 SYVNNRWYNDALLVFREM----------VNGGFR----------------------PDNY 132
Y+ + +AL +FR M V GGF P+
Sbjct: 168 GYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNES 227
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLK-VRLDWNLFVGNGLISMYGKCGCLLEARYVLD- 190
T+PC + A S + G +H +K + +N+FV N LIS Y KCG + ++ +
Sbjct: 228 TFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNK 287
Query: 191 -EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMPAVTNTS-- 246
E +R++VSWNSM+ GYA N R ++A+ + +M D +P+ T+ ++ A +
Sbjct: 288 LEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLI 347
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
+ +Y + + +L+ + +D+ + + + + I +
Sbjct: 348 QEGYMYFNKAVNDYDDPNLLELEHYACM----------VDMLSRSGRFKEAEELIKSMPL 397
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
P G ALL G +IH KL + +LE + RDV
Sbjct: 398 DPGIGFWKALLGGCQIHSNKRLAKLAASKILE----------------------LDPRDV 435
Query: 367 ASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
+S+ L +AY N + +M+ +G+
Sbjct: 436 SSYVMLSNAYSAMENWQNVSLIRRKMKETGL 466
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 15/292 (5%)
Query: 237 SLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
S+ V + SD + +F + + ++S +I ++K S A + ++ +
Sbjct: 30 SIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGI 89
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
P+ T +V+ + + LG+++H Y + L N+ + +++++ Y + L DA++
Sbjct: 90 RPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARR 149
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
FD + +V S T+LIS Y + AL+LF M + + + A++ S +G
Sbjct: 150 CFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGR 205
Query: 417 LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR-----AGRVDEAYDVIKQMPLEPNERV 471
EE F M + + P F C + + AG+ A IK + N V
Sbjct: 206 NEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC-AIKFLGKRFNVFV 264
Query: 472 WGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNI--YAKAGRWKE 521
W +L+S NM+ LLA + +L EQ S I YA GR +E
Sbjct: 265 WNSLISFYSKCGNMEDSLLAFN---KLEEEQRNIVSWNSMIWGYAHNGRGEE 313
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 278/537 (51%), Gaps = 41/537 (7%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
D + + +H ++ + + + A+++ + A +F+ +S N+ +N MIR
Sbjct: 40 DTVEVSRIHGYMVK-TGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIR 98
Query: 105 SYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
Y + A VF ++ G D +++ LK+CS + G LHG L+
Sbjct: 99 GYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMV 158
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRR-DVVSWNSMVAGYAQNMRFDDALEVCREM 223
+ N LI Y CG + +AR V DEMP+ D V++++++ GY Q + AL++ R M
Sbjct: 159 FTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIM 218
Query: 224 DDLGQKPDAGTMASLMPAVTN------TSSDNVLYVK----------------------- 254
+ T+ S + A+++ S +VL +K
Sbjct: 219 RKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGI 278
Query: 255 ----DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
IF +K +V+WN MI Y K + + L QM+ +++P++ T +L +C
Sbjct: 279 SSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSC 338
Query: 311 GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWT 370
A +GR + + +E +++ + +L +L+DMYA+ G LE A ++F++MK +DV SWT
Sbjct: 339 AYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWT 398
Query: 371 SLISAYGMTGQGCNALALFSEMQ--NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
++IS YG G A+ LF++M+ N + P+ I F+ +L+ACSH GL+ EG FK+M
Sbjct: 399 AMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMV 458
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG 488
+ Y TP++EH+ C+VDLLGRAG+++EAY++I+ +P+ + W LL++CRVY N D+G
Sbjct: 459 EAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLG 518
Query: 489 LLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
L ++ +LL+ +A AG ++ + + + RK G S +E+
Sbjct: 519 ESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLD----NELNKGRKEAGYSAIEI 571
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 91/187 (48%)
Query: 39 ALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVF 98
A+ D+ ++ H I + + L L+ Y G +AR++FD ++VV
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT 295
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
+N MI Y + + + R+M +P++ T+ +L +C+ S+ G + +
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
+ R+ + +G L+ MY K G L +A + + M +DV SW +M++GY + +A+
Sbjct: 356 EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVT 415
Query: 219 VCREMDD 225
+ +M++
Sbjct: 416 LFNKMEE 422
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/512 (29%), Positives = 263/512 (51%), Gaps = 34/512 (6%)
Query: 64 NPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMV 123
+P +L R YA + +ARK+FD ER+V +N +IR+Y + L +F +++
Sbjct: 39 DPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQIL 98
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
RPDN+TY C+ + S S + + +HG + L ++ G+ ++ Y K G ++
Sbjct: 99 RSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIV 158
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
EA + +P D+ WN M+ GY +D + + M G +P+ TM +L +
Sbjct: 159 EASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 244 NTS----------------SDNVLYVK-----------------DIFINLEKKSLVSWNV 270
+ S D+ YV +F ++ + LV+ +
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+IT Y + A+ L+ ++ S +PD + A VL +C +LS + G+ +H YV R
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFS 390
L ++ + ++LIDMY++CG L+ A +F + +++ S+ SLI G+ G A F+
Sbjct: 339 LELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFT 398
Query: 391 EMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA 450
E+ G+ PD I F A+L C HSGLL +G+ F++M ++ I P+ EH+ +V L+G A
Sbjct: 399 EILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMA 458
Query: 451 GRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPE-QSGYYVLL 509
G+++EA++ + + + + G LLS C V+ N + + A+N+ + E +S Y V+L
Sbjct: 459 GKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVML 518
Query: 510 SNIYAKAGRWKEVTEVRSLMKRRRIRKTPGIS 541
SN+YA+ GRW EV +R + K PGIS
Sbjct: 519 SNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 163/379 (43%), Gaps = 35/379 (9%)
Query: 11 KLQALVSSFQKSLASFQSP-VIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGI 69
+ ++S F + L S P L + + D L+ +H I + G
Sbjct: 86 QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGS 145
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
+++AY+ G A K+F I + ++ +NVMI Y +++ + +F M + G +P
Sbjct: 146 AIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQP 205
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
+ YT + L +H LK+ LD + +VG L++MY +C C+ A V
Sbjct: 206 NCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVF 265
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDA-------GTMASLMPAV 242
+ + D+V+ +S++ GY++ +AL + E+ G+KPD G+ A L +V
Sbjct: 266 NSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSV 325
Query: 243 TNTSSDNV------------------LYVK--------DIFINLEKKSLVSWNVMITVYM 276
+ + +Y K +F + +K++VS+N +I
Sbjct: 326 SGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLG 385
Query: 277 KNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK-KLRPNL 335
+ A + + ++ + + PD IT +++L C L G+ I E ++ + + P
Sbjct: 386 LHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQT 445
Query: 336 LLENSLIDMYARCGCLEDA 354
++ + G LE+A
Sbjct: 446 EHYVYMVKLMGMAGKLEEA 464
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 18/320 (5%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
+VH + +N + +G L+ Y+ C +A VF+ ISE ++V + +I Y
Sbjct: 228 SVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCG 287
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+ +AL +F E+ G +PD VL +C+ + G ++H ++++ L+ ++ V +
Sbjct: 288 NHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCS 347
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
LI MY KCG L A + +P +++VS+NS++ G + A E E+ ++G P
Sbjct: 348 ALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIP 407
Query: 231 DAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKN--SMPGN---AI 285
D T ++L+ ++ N ++IF ++ + + VYM M G A
Sbjct: 408 DEITFSALLCTCCHSGLLN--KGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAF 465
Query: 286 DLYLQMEKSEVEPDAITCASVLPAC----GDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
+ + ++K D+ ++L C A ++ IH+ E ++ ++L N
Sbjct: 466 EFVMSLQK---PIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSN-- 520
Query: 342 IDMYARCGCLEDAQKVFDKM 361
+YAR G ++ +++ D +
Sbjct: 521 --VYARYGRWDEVERLRDGI 538
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 27/203 (13%)
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMT 379
+++H +V + KL + L YA L A+K+FD R V W S+I AY
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 380 GQGCNALALFSEMQNSGISPDHIAFVAILSACSHS----------GLLEEGKVYFKQMTD 429
Q L+LFS++ S PD+ + + S S G+ + F Q+
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL--SSCRVYSNMDI 487
+ +V +AG + EA + +P +P+ +W ++ C + + I
Sbjct: 145 -----------SAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMILGYGCCGFWDKGI 192
Query: 488 GLLAADNLLQLSPEQSGYYVLLS 510
L NL+Q Q Y +++
Sbjct: 193 NLF---NLMQHRGHQPNCYTMVA 212
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 202/329 (61%)
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+F +L+ + L+ WN MI+ Y++ + + +Y M ++ + PD T ASV AC L
Sbjct: 165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDR 224
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L G+R H + ++ ++ N++++++L+DMY +C D +VFD++ R+V +WTSLIS
Sbjct: 225 LEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISG 284
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
YG G+ L F +M+ G P+ + F+ +L+AC+H GL+++G +F M DY I P
Sbjct: 285 YGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEP 344
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
+H+A +VD LGRAGR+ EAY+ + + P + + VWG+LL +CR++ N+ + LAA
Sbjct: 345 EGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKF 404
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
L+L P G YV+ +N YA G + ++VR M+ ++K PG S +EL +VH F+
Sbjct: 405 LELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKD 464
Query: 556 DTSHPQSKEIYEELYVLVGKMKELGYVPE 584
DTSH S++IY++++ + ++ Y P+
Sbjct: 465 DTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 149/324 (45%), Gaps = 23/324 (7%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H ++ + N L +KL+ YA G+ TA +F + R+++ +N MI YV
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQK 187
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ L ++ +M PD YT+ V +ACS D L G + H M+K + N+ V
Sbjct: 188 GLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVD 247
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ L+ MY KC + V D++ R+V++W S+++GY + + + L+ +M + G +
Sbjct: 248 SALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCR 307
Query: 230 PDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSM--PGNAIDL 287
P+ T ++ A + + + + F ++++ + M +++ G +
Sbjct: 308 PNPVTFLVVLTACNHGGLVDKGW--EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
Query: 288 YLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLE-------NS 340
Y + KS + S+L AC RIH V+ +L LE N
Sbjct: 366 YEFVMKSPCKEHPPVWGSLLGAC----------RIHGNVKLLELAATKFLELDPTNGGNY 415
Query: 341 LI--DMYARCGCLEDAQKVFDKMK 362
++ + YA CG E A KV KM+
Sbjct: 416 VVFANGYASCGLREAASKVRRKME 439
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 295 EVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDA 354
+VEP+ T A +L C G+RIH + N L+ L+ +YA G L+ A
Sbjct: 105 QVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 355 QKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHS 414
+F +K RD+ W ++IS Y G L ++ +M+ + I PD F ++ ACS
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 415 GLLEEGK-----------------------VYFK--QMTDDYRI-----TPRIEHFACLV 444
LE GK +YFK +D +R+ T + + L+
Sbjct: 223 DRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLI 282
Query: 445 DLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMDIG---LLAADNLLQL 498
G G+V E ++M E PN + +L++C +D G + +
Sbjct: 283 SGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGI 342
Query: 499 SPEQSGYYVLLSNIYAKAGRWKEVTE 524
PE Y ++ + +AGR +E E
Sbjct: 343 EPEGQHYAAMVDTL-GRAGRLQEAYE 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 117/293 (39%), Gaps = 37/293 (12%)
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
+ G + + TY +L+ C G ++H M V N ++ L+ +Y G L
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV- 242
A + + RD++ WN+M++GY Q + L + +M PD T AS+ A
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 243 ---------------------TNTSSDNVL---YVK--------DIFINLEKKSLVSWNV 270
+N D+ L Y K +F L +++++W
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+I+ Y + + + +M++ P+ +T VL AC + G H Y ++
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRD 339
Query: 331 --LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WTSLISAYGMTG 380
+ P +++D R G L++A + K ++ W SL+ A + G
Sbjct: 340 YGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 152/479 (31%), Positives = 246/479 (51%), Gaps = 38/479 (7%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN-G 125
+G L+ Y+ CGE A ++F+++ ++VV YN I + N N VF M
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFS 225
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
P++ T+ + AC+ NL++G QLHG ++K + VG LI MY KC C A
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 186 RYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
V E+ R+++SWNS+++G N + + A+E+ ++D G KPD+ T
Sbjct: 286 YIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSAT---------- 335
Query: 245 TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCA 304
WN +I+ + + A + +M + P
Sbjct: 336 -----------------------WNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLT 372
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM--K 362
S+L AC D+ L G+ IH +V + ++ + SLIDMY +CG A+++FD+ K
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPK 432
Query: 363 FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKV 422
+D W +IS YG G+ +A+ +F ++ + P F A+LSACSH G +E+G
Sbjct: 433 PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQ 492
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
F+ M ++Y P EH C++DLLGR+GR+ EA +VI QM + +LL SCR +
Sbjct: 493 IFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQH 551
Query: 483 SNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGIS 541
+ +G AA L +L PE +V+LS+IYA RW++V +R ++ ++++ K PG+S
Sbjct: 552 LDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 220/492 (44%), Gaps = 46/492 (9%)
Query: 129 PDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
P+ +T+P +LK+C+ ++ G LH ++K ++F L+SMY K + +A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD 248
LDEMP R + S N+ V+G +N DA + + G ++ T+AS++ +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 249 NVLY------------------------------VKDIFINLEKKSLVSWNVMITVYMKN 278
L+ +F + KS+V++N I+ M+N
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 279 SMPGNAIDLYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
+ ++ M K S EP+ +T + + AC L L GR++H V +K+ + ++
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMK-FRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+LIDMY++C C + A VF ++K R++ SW S+IS + GQ A+ LF ++ + G
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
+ PD + +++S S G + E +F++M + P ++ L+ +
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAAD--NLLQLSPEQSGYYVLLSNIYA 514
++ + ER L S +Y + A + + P+ ++ ++ + Y
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 515 KAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVG 574
K G + E+ L++ + VE + T + SH + E +++ L+
Sbjct: 448 KHGECESAIEIFELLREEK---------VEPSLATFTAVLSACSHCGNVEKGSQIFRLM- 497
Query: 575 KMKELGYVPETD 586
+E GY P T+
Sbjct: 498 -QEEYGYKPSTE 508
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
Query: 19 FQKSLASFQSPVIAVELLGKALDQYPDIIALKN---VHTKLIYLNSHENPSLGIKLMRAY 75
F++ L+ P +++ L L DI LKN +H +I + + + L+ Y
Sbjct: 356 FERMLSVVMVP--SLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMY 413
Query: 76 AACGEPGTARKVFD--EISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYT 133
CG AR++FD E ++ VF+NVMI Y + A+ +F + P T
Sbjct: 414 MKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLAT 473
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN--GLISMYGKCGCLLEARYVLDE 191
+ VL ACS N+ G Q+ +++ + + +I + G+ G L EA+ V+D+
Sbjct: 474 FTAVLSACSHCGNVEKGSQIF-RLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQ 532
Query: 192 M 192
M
Sbjct: 533 M 533
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
G ++D+ L P+ T +L +C L ++ GR +H V + ++ +L
Sbjct: 18 GTSLDVILSHS-----PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATAL 72
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
+ MY + + DA KV D+M R +AS + +S G +A +F + + SG +
Sbjct: 73 VSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNS 132
Query: 402 IAFVAILSAC 411
+ ++L C
Sbjct: 133 VTVASVLGGC 142
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 152/507 (29%), Positives = 252/507 (49%), Gaps = 40/507 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y+ C E G+A +F E+ +++ V +N MI +Y + +A+ VF+ M
Sbjct: 192 LISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEIS 251
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T +L A + LH ++K + ++ V L+ Y +CGCL+ A +
Sbjct: 252 PVTIINLLSAHVSHE------PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS--- 247
+ +V S+V+ YA+ D A+ + L K DA + ++ +S
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Query: 248 ------------------------------DNVLYVKDIFINLEKKSLVSWNVMITVYMK 277
D+V V +F L++ L+SWN +I+ ++
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQ 425
Query: 278 NSMPGNAIDLYLQME-KSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLL 336
+ A +++ QM + PDAIT AS+L C L L LG+ +H Y R
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENF 485
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
+ +LIDMYA+CG A+ VF +K A+W S+IS Y ++G AL+ + EM+ G
Sbjct: 486 VCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG 545
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
+ PD I F+ +LSAC+H G ++EGK+ F+ M ++ I+P ++H+A +V LLGRA EA
Sbjct: 546 LKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEA 605
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKA 516
+I +M ++P+ VWG LLS+C ++ +++G A + L + G YVL+SN+YA
Sbjct: 606 LYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATE 665
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGISNV 543
W +V VR++MK G+S +
Sbjct: 666 AMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 198/438 (45%), Gaps = 36/438 (8%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y G +A+ +FDE+ ER+ V +N +I Y N + DA +F M+ GF P
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPS 150
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T +L C + G +HG K L+ + V N LIS Y KC L A +
Sbjct: 151 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR 210
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNV 250
EM + VSWN+M+ Y+Q+ ++A+ V + M + + T+ +L+ A + +
Sbjct: 211 EMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHC 270
Query: 251 LYVK---------------------------DIFINLEKKSLVSWNVMITVYMKNSMPGN 283
L VK ++ + ++ S+V +++ Y +
Sbjct: 271 LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDI 330
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLID 343
A+ + + + ++ DA+ +L C S + +G +H Y + L L+ N LI
Sbjct: 331 AVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLIT 390
Query: 344 MYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ-NSGISPDHI 402
MY++ +E +F++++ + SW S+IS +G+ A +F +M G+ PD I
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 403 AFVAILSACSHSGLLEEGK-VYFKQMTDDYRITPRIEHFAC--LVDLLGRAGRVDEAYDV 459
++L+ CS L GK ++ + +++ E+F C L+D+ + G +A V
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGNEVQAESV 506
Query: 460 IKQMPLEPNERVWGTLLS 477
K + P W +++S
Sbjct: 507 FKSIK-APCTATWNSMIS 523
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 219/496 (44%), Gaps = 80/496 (16%)
Query: 94 RNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQL 153
R++ +++ +++S ++ + + +FR+++ P+++T L+A + S N F LQ+
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFN-SFKLQV 69
Query: 154 HGA---MLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
+ K LD ++V L+++Y K GC+ A+ + DEMP RD V WN+++ GY++N
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMP------------AVTNTSSDNVL----YVK 254
DA ++ M G P A T+ +L+P +V ++ + L VK
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 255 D-----------------IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
+ +F ++ KS VSWN MI Y ++ + AI ++ M + VE
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
+T ++ LSA + +H V + + ++ + SL+ Y+RCGCL A+++
Sbjct: 250 ISPVTIINL------LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 358 FDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG-- 415
+ K + TS++S Y G A+ FS+ + + D +A V IL C S
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 416 -------------------LLEEGKVYFKQMTDDYRI----------TPRIEHFACLVDL 446
L+ G + DD TP I + ++
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS-WNSVISG 422
Query: 447 LGRAGRVDEAYDVIKQMPLE----PNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ 502
++GR A++V QM L P+ +LL+ C +++G L+ + E
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN 482
Query: 503 SGYY-VLLSNIYAKAG 517
+ L ++YAK G
Sbjct: 483 ENFVCTALIDMYAKCG 498
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 162/384 (42%), Gaps = 43/384 (11%)
Query: 28 SPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKV 87
SPV + LL + P +H ++ + S+ L+ AY+ CG +A ++
Sbjct: 251 SPVTIINLLSAHVSHEP-------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 88 FDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNL 147
+ + ++V ++ Y + A++ F + + D +L C S ++
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHI 363
Query: 148 RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGY 207
G+ LHG +K L V NGLI+MY K + ++ +++ ++SWNS+++G
Sbjct: 364 DIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGC 423
Query: 208 AQNMRFDDALEVCREMDDLGQ-KPDAGTMASLMPAVTNTSSDNV---------------- 250
Q+ R A EV +M G PDA T+ASL+ + N+
Sbjct: 424 VQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENE 483
Query: 251 ---------LYVK--------DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK 293
+Y K +F +++ +WN MI+ Y + + A+ YL+M +
Sbjct: 484 NFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMRE 543
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRR-IHEYVERKKLRPNLLLENSLIDMYARCGCLE 352
++PD IT VL AC + G+ ++ + P L ++ + R
Sbjct: 544 KGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFT 603
Query: 353 DAQKVFDKMKFR-DVASWTSLISA 375
+A + KM + D A W +L+SA
Sbjct: 604 EALYLIWKMDIKPDSAVWGALLSA 627
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/332 (37%), Positives = 205/332 (61%), Gaps = 7/332 (2%)
Query: 248 DNVLY-VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
D +L+ + +F + + +V W+V++ Y++ + ++++ +M +EPD + +
Sbjct: 165 DKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTA 224
Query: 307 LPACGDLSALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
L AC + AL G+ IHE+V++K+ + ++ + +L+DMYA+CGC+E A +VF+K+ R+
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRN 284
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGKVYF 424
V SW +LI Y G A ++ GI PD + + +L+AC+H G LEEG+
Sbjct: 285 VFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTML 344
Query: 425 KQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSN 484
+ M Y ITP+ EH++C+VDL+ RAGR+D+A D+I++MP++P VWG LL+ CR + N
Sbjct: 345 ENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKN 404
Query: 485 MDIGLLAADNLLQLSP----EQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGI 540
+++G LA NLL L E+ V LSNIY R E +VR ++++R IRKTPG
Sbjct: 405 VELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGW 464
Query: 541 SNVELNSQVHTFLAGDTSHPQSKEIYEELYVL 572
S +E++ V F++GD SHP +I+ +++L
Sbjct: 465 SLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLL 496
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 12/257 (4%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
ARKVFDEI + +VV ++V++ YV ++ L VF+EM+ G PD ++ L AC+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 144 SDNLRFGLQLHGAMLKVR-LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
L G +H + K R ++ ++FVG L+ MY KCGC+ A V +++ RR+V SW +
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 203 MVAGYAQNMRFDDALEVCREMD-DLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE 261
++ GYA A ++ + G KPD+ + ++ A + F+
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG----------FLEEG 340
Query: 262 KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRR 321
+ L + + K+ +DL + + + D I + P ALL G R
Sbjct: 341 RTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCR 400
Query: 322 IHEYVERKKLRPNLLLE 338
H+ VE +L LL+
Sbjct: 401 THKNVELGELAVQNLLD 417
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 176/408 (43%), Gaps = 57/408 (13%)
Query: 14 ALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMR 73
++VSSF +S ++S ++A + + + +K+ H+ I H N KL+
Sbjct: 2 SVVSSFHQS---WKSLILASQ-------RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLT 51
Query: 74 AYAACGEPGT----ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG---G 126
A+ A +FD I N Y+ MIR + + L F MV
Sbjct: 52 AFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEED 111
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK--VRLDWNLFVGNGLISMYGKCGCLLE 184
P T+ ++ AC + G Q+H ++K V L + V G++ +Y + L +
Sbjct: 112 ITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS-DGHVQTGVLRIYVEDKLLFD 170
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
AR V DE+P+ DVV W+ ++ GY + + LEV +EM G +PD ++ + + A
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 245 TS-------------------SDNV-------LYVK--------DIFINLEKKSLVSWNV 270
SD +Y K ++F L ++++ SW
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITCASVLPACGDLSALLLGRRIHEYVE-R 328
+I Y A ++E+ + ++PD++ VL AC L GR + E +E R
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEAR 350
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WTSLISA 375
+ P + ++D+ R G L+DA + +KM + +AS W +L++
Sbjct: 351 YGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE---PDAITCASVLP 308
Y IF ++E + ++ MI + ++S P + +L M K E E P +T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIV 124
Query: 309 ACGDLSALLLGRRIHEYVERKKL-RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
AC +G++IH +V + + + ++ ++ +Y L DA+KVFD++ DV
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVV 184
Query: 368 SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
W L++ Y G G L +F EM GI PD + L+AC+ G L +GK + +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
I + LVD+ + G ++ A +V +++ N W L+ Y
Sbjct: 245 KKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT-RRNVFSWAALIGGYAAY 298
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 203/329 (61%), Gaps = 6/329 (1%)
Query: 250 VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA 309
+L + +F + + +V W+V++ Y++ + ++++ +M +EPD + + L A
Sbjct: 168 LLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTA 227
Query: 310 CGDLSALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
C + AL G+ IHE+V++K + ++ + +L+DMYA+CGC+E A +VF K+ R+V S
Sbjct: 228 CAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS 287
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
W +LI Y G A+ ++ GI PD + + +L+AC+H G LEEG+ + M
Sbjct: 288 WAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDI 487
Y ITP+ EH++C+VDL+ RAGR+D+A ++I++MP++P VWG LL+ CR + N+++
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 488 GLLAADNLLQLSP----EQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNV 543
G LA NLL L E+ V LSNIY R E ++VR ++++R +RKTPG S +
Sbjct: 408 GELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVL 467
Query: 544 ELNSQVHTFLAGDTSHPQSKEIYEELYVL 572
E++ V F++GD SHP +I+ +++L
Sbjct: 468 EVDGNVTKFVSGDVSHPNLLQIHTVIHLL 496
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 12/257 (4%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
ARKVFDEI + +VV ++V++ YV ++ L VFREM+ G PD ++ L AC+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 144 SDNLRFGLQLHGAMLKVR-LDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNS 202
L G +H + K ++ ++FVG L+ MY KCGC+ A V ++ RR+V SW +
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 203 MVAGYAQNMRFDDALEVCREMD-DLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE 261
++ GYA A+ ++ + G KPD+ + ++ A + F+
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG----------FLEEG 340
Query: 262 KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRR 321
+ L + + K+ +DL + + + + I + P ALL G R
Sbjct: 341 RSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCR 400
Query: 322 IHEYVERKKLRPNLLLE 338
H+ VE +L LL+
Sbjct: 401 THKNVELGELAVKNLLD 417
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 179/408 (43%), Gaps = 57/408 (13%)
Query: 14 ALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMR 73
++VSSF +S ++S ++A + + + +K+ H+ I H N KL+
Sbjct: 2 SVVSSFHQS---WKSLILASQ-------RCNTVKQIKSTHSLFIIHGLHRNTYAISKLLT 51
Query: 74 AYAACGEPGT----ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG---G 126
A+ A +FD I N Y+ MIR + + L F MV
Sbjct: 52 AFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEED 111
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK--VRLDWNLFVGNGLISMYGKCGCLLE 184
P T+ ++ AC + G Q+H ++K V L + V G++ +Y + LL+
Sbjct: 112 IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS-DSHVQTGVLRIYVEDKLLLD 170
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
AR V DE+P+ DVV W+ ++ GY + + LEV REM G +PD ++ + + A
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 245 TS-------------------SDNV-------LYVK--------DIFINLEKKSLVSWNV 270
SD +Y K ++F L ++++ SW
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITCASVLPACGDLSALLLGRRIHEYVE-R 328
+I Y A+ ++E+ + ++PD++ VL AC L GR + E +E R
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEAR 350
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS-WTSLISA 375
++ P + ++D+ R G L+DA + +KM + +AS W +L++
Sbjct: 351 YEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE---PDAITCASVLP 308
Y IF ++E + ++ MI + ++S P + +L M K E E P +T ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIV 124
Query: 309 ACGDLSALLLGRRIHEYVERKKL-RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
AC +G++IH +V + + + ++ ++ +Y L DA+KVFD++ DV
Sbjct: 125 ACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVV 184
Query: 368 SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
W L++ Y G G L +F EM G+ PD + L+AC+ G L +GK + +
Sbjct: 185 KWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFV 244
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
I + LVD+ + G ++ A +V K++ N W L+ Y
Sbjct: 245 KKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT-RRNVFSWAALIGGYAAY 298
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 232/422 (54%), Gaps = 39/422 (9%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN 108
LK +HTK+I N + L +L+ ++ GE A VF+++ + +N+MIRS
Sbjct: 36 LKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSV 95
Query: 109 NRWYNDALLVF-REMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
N +ALL+F M++ + D +T+P V+KAC S ++R G Q+HG +K ++F
Sbjct: 96 NHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVF 155
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
N L+ +Y KCG R V D+MP R +VSW +M+ G N + D A
Sbjct: 156 FQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSA----------- 204
Query: 228 QKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDL 287
+ +F + +++VSW MIT Y+KN P A L
Sbjct: 205 --------------------------EIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQL 238
Query: 288 YLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR 347
+ +M+ +V+P+ T ++L A L +L +GR +H+Y + + L +LIDMY++
Sbjct: 239 FRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSK 298
Query: 348 CGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF-SEMQNSGISPDHIAFVA 406
CG L+DA+KVFD M+ + +A+W S+I++ G+ G G AL+LF + + + PD I FV
Sbjct: 299 CGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVG 358
Query: 407 ILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE 466
+LSAC+++G +++G YF +M Y I+P EH AC++ LL +A V++A ++++ M +
Sbjct: 359 VLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSD 418
Query: 467 PN 468
P+
Sbjct: 419 PD 420
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/518 (32%), Positives = 263/518 (50%), Gaps = 20/518 (3%)
Query: 61 SHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR 120
S +N ++ Y G+ A ++F E+ ERN+V + MI + N Y +AL++F
Sbjct: 227 SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFL 286
Query: 121 EMVNG--GFRPDNYTYPCVLKACSC--SDNLRFGLQLHGAMLK---VRLDWNLFVGNGLI 173
EM P+ T + AC + R G QLH ++ +D + + L+
Sbjct: 287 EMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLV 346
Query: 174 SMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAG 233
MY G + A+ +L+E D+ S N ++ Y +N + A + + L K
Sbjct: 347 HMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 234 TMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK 293
+M + +V +F L K V+W VMI+ ++N + A L M +
Sbjct: 405 SMID-----GYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVR 459
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK--LRPNLLLENSLIDMYARCGCL 351
++P T + +L + G S L G+ IH + + P+L+L+NSL+ MYA+CG +
Sbjct: 460 CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAI 519
Query: 352 EDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC 411
EDA ++F KM +D SW S+I G AL LF EM +SG P+ + F+ +LSAC
Sbjct: 520 EDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSAC 579
Query: 412 SHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERV 471
SHSGL+ G FK M + Y I P I+H+ ++DLLGRAG++ EA + I +P P+ V
Sbjct: 580 SHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTV 639
Query: 472 WGTLLSSCRV-YSNMD---IGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRS 527
+G LL C + + + D I AA LL+L P + +V L N+YA GR E+R
Sbjct: 640 YGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRK 699
Query: 528 LMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEI 565
M + ++KTPG S V +N + + FL+GD S ++ ++
Sbjct: 700 EMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 206/480 (42%), Gaps = 95/480 (19%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ YA G AR +F+ + ERN+V N M+ YV R N+A +FREM P
Sbjct: 83 LLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM------PK 136
Query: 131 NYTYPCVLKACSCSDNL-RFGLQLHGAMLKVRL-DWNLFVGNGLISMYGKCGCLLEARYV 188
N V+ C D ++L M + + WN V GLI + G + +A+ V
Sbjct: 137 NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLV-TGLI----RNGDMEKAKQV 191
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM-DDLGQKPDAGTMASLMPAVTNTSS 247
D MP RDVVSWN+M+ GY +N D +E + + D+ +K + T S++
Sbjct: 192 FDAMPSRDVVSWNAMIKGYIEN----DGMEEAKLLFGDMSEK-NVVTWTSMVYGYCRYG- 245
Query: 248 DNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK--SEVEPDAITCAS 305
+V +F + ++++VSW MI+ + N + A+ L+L+M+K V P+ T S
Sbjct: 246 -DVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 306 VLPACGDLSALL--LGRRIHEYV---ERKKLRPNLLLENSLIDMYARCGC---------- 350
+ ACG L LG ++H V + + + L SL+ MYA G
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 351 -------------------LEDAQKVFDKMK-FRDVASWTSLISAYGMTGQGCNALALF- 389
LE A+ +F+++K D SWTS+I Y G A LF
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 390 ------------------------------SEMQNSGISPDHIAFVAILSACSHSGLLEE 419
S+M G+ P + + +LS+ + L++
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 420 GK---VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
GK + T Y P + LV + + G +++AY++ +M ++ + W +++
Sbjct: 485 GKHIHCVIAKTTACY--DPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVSWNSMI 541
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/474 (31%), Positives = 243/474 (51%), Gaps = 57/474 (12%)
Query: 84 ARKVFDEISERNVVFYNVMIR-------SYVNNRWYNDALLVFREMVNGGFRPDNYTYPC 136
A VF I+ + +N +IR S ++++ + F EM PD +T+P
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRF------FVEMRRRSVPPDFHTFPF 120
Query: 137 VLKACSCSDN--LRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
V KAC+ N L LH L+ L +LF N LI +Y + A + DE P+
Sbjct: 121 VFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQ 180
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVK 254
RDVV++N ++ G + A E+ R +
Sbjct: 181 RDVVTYNVLIDGLVK------AREIVR-------------------------------AR 203
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
++F ++ + LVSWN +I+ Y + + AI L+ +M ++PD + S L AC
Sbjct: 204 ELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSG 263
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
G+ IH+Y +RK+L + L L+D YA+CG ++ A ++F+ + + +W ++I+
Sbjct: 264 DWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMIT 323
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
M G G + F +M +SGI PD + F+++L CSHSGL++E + F QM Y +
Sbjct: 324 GLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVN 383
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER----VWGTLLSSCRVYSNMDIGLL 490
++H+ C+ DLLGRAG ++EA ++I+QMP + R W LL CR++ N++I
Sbjct: 384 REMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEK 443
Query: 491 AADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR-RRIRKTPGISNV 543
AA+ + LSPE G Y ++ +YA A RW+EV +VR ++ R ++++K G S V
Sbjct: 444 AANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 37 GKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNV 96
GKA+ Y K ++++S L L+ YA CG TA ++F+ S++ +
Sbjct: 268 GKAIHDY--------TKRKRLFIDSF----LATGLVDFYAKCGFIDTAMEIFELCSDKTL 315
Query: 97 VFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS---DNLRFGLQL 153
+N MI + + FR+MV+ G +PD T+ VL CS S D R
Sbjct: 316 FTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ 375
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP-----RRDVVSWNSMVAG 206
++ V + + + + G+ G + EA ++++MP R +++W+ ++ G
Sbjct: 376 MRSLYDVNREMKHY--GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGG 431
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 261/518 (50%), Gaps = 59/518 (11%)
Query: 85 RKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS 144
+++ + + + ++R +R + + + V+ +M N G P ++ VL+AC
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 145 DNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMV 204
+N+ G +H LK L ++V GL+ +Y + G + A+ D++ ++ VSWNS++
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 205 AGYAQNMRFDDALEVCREMDD------------LGQKPDAGTMASLMPA--VTNTSSDNV 250
GY ++ D+A V ++ + +K D G SL A + + +S N+
Sbjct: 178 HGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNI 237
Query: 251 L---YV--------KDIFINLEKKSLVSW------------------------------- 268
L YV + F + +K+ VSW
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 269 NVMITVYMKNSMPGNAIDLYLQM--EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
+ MI Y +N P +A+ L+ QM S ++PD IT +SV+ A L G + Y+
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNAL 386
++ + LL SLID+Y + G A K+F + +D S++++I G+ G A
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEAN 417
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDL 446
+LF+ M I P+ + F +LSA SHSGL++EG F M D+ + P +H+ +VD+
Sbjct: 418 SLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDM 476
Query: 447 LGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYY 506
LGRAGR++EAY++IK MP++PN VWG LL + +++N++ G +A + ++L + +GY
Sbjct: 477 LGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYL 536
Query: 507 VLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVE 544
L+ IY+ GRW + VR +K +++ KT G S VE
Sbjct: 537 SHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 4/182 (2%)
Query: 246 SSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCAS 305
S + V YVK I SW ++ ++ +D+Y+ M S + P + S
Sbjct: 50 SRNIVTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTS 109
Query: 306 VLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD 365
VL ACG + ++ G+ IH + L + ++ L+ +Y+R G +E A+K FD + ++
Sbjct: 110 VLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKN 169
Query: 366 VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFK 425
SW SL+ Y +G+ A +F ++ D +++ I+S+ + G + F
Sbjct: 170 TVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFS 225
Query: 426 QM 427
M
Sbjct: 226 AM 227
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 248 bits (634), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 209/344 (60%), Gaps = 15/344 (4%)
Query: 245 TSSDNVLYVKDIFINL-EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
+S +V Y + +F EK+++V W MI+ Y +N AI+L+ +ME ++E D +
Sbjct: 111 SSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIV 170
Query: 304 ASVLPACGDLSALLLGRRIH-EYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
L AC DL A+ +G I+ ++RK+ L +L L NSL++MY + G E A+K+FD+
Sbjct: 171 TVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDES 230
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEM------QNSGISPDHIAFVAILSACSHSG 415
+DV ++TS+I Y + GQ +L LF +M Q++ I+P+ + F+ +L ACSHSG
Sbjct: 231 MRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSG 290
Query: 416 LLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTL 475
L+EEGK +FK M DY + PR HF C+VDL R+G + +A++ I QMP++PN +W TL
Sbjct: 291 LVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTL 350
Query: 476 LSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIR 535
L +C ++ N+++G + +L + G YV LSNIYA G W E +++R +++RR+
Sbjct: 351 LGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM- 409
Query: 536 KTPGISNVELNSQVHTFLAGDTSHPQS---KEIYEELYVLVGKM 576
PG S +EL S ++ F++G ++ + EI E L LV M
Sbjct: 410 --PGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCLVSCM 451
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 165/343 (48%), Gaps = 26/343 (7%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER-NVVFYNVMIRSYVN 108
+ +H + L + + L+ Y++ G+ AR+VFDE E+ N+V + MI +Y
Sbjct: 85 RQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTE 144
Query: 109 NRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKV--RLDWNL 166
N +A+ +F+ M D L AC+ ++ G +++ +K RL +L
Sbjct: 145 NENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDL 204
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
+ N L++MY K G +AR + DE R+DV ++ SM+ GYA N + ++LE+ ++M +
Sbjct: 205 TLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTI 264
Query: 227 GQK------PDAGTMASLMPAVTNTS--SDNVLYVKDIFINLE-KKSLVSWNVMITVYMK 277
Q P+ T ++ A +++ + + K + ++ K + M+ ++ +
Sbjct: 265 DQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCR 324
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG----RRIHEYVERKKLRP 333
+ +A + QM ++P+ + ++L AC + LG RRI E ++R +
Sbjct: 325 SGHLKDAHEFINQM---PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE-LDRDHVGD 380
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV--ASWTSLIS 374
+ L N +YA G ++ K+ D+++ R + SW L S
Sbjct: 381 YVALSN----IYASKGMWDEKSKMRDRVRKRRMPGKSWIELGS 419
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 11/208 (5%)
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAI-DLYLQMEKSEVEPDAITCASVLPACGDLS 314
++ KSL S N + Y+++ P A+ D + +S P + SVL A S
Sbjct: 20 FLLHFHTKSLKS-NHTLKQYLESGEPIKALLDFRHRFRQS---PSFVDSFSVLFAIKVSS 75
Query: 315 AL----LLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM-KFRDVASW 369
A L GR+IH V + + ++ SL+ Y+ G ++ A++VFD+ + +++ W
Sbjct: 76 AQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLW 135
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMT 428
T++ISAY A+ LF M+ I D + LSAC+ G ++ G ++Y + +
Sbjct: 136 TAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK 195
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEA 456
R+ + L+++ ++G ++A
Sbjct: 196 RKRRLAMDLTLRNSLLNMYVKSGETEKA 223
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 241/477 (50%), Gaps = 42/477 (8%)
Query: 206 GYAQNMRFDDALEVCREMDDLGQKPDA----GTMASLMPAVTNTSSDNVLYVKDIFINLE 261
GY +N + + E+ + + Q D GT + +P NT ++ +L+
Sbjct: 92 GYNRNQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVPQENNTGGNHFQQDHSGHSSLD 151
Query: 262 ------KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
++ V V I +N G +DL P A + CGD A
Sbjct: 152 ELDSICREGKVKKAVEIIKSWRNE--GYVVDL----------PRLFWIAQL---CGDAQA 196
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L + +HE++ ++ NS+I+MY+ CG +EDA VF+ M R++ +W +I
Sbjct: 197 LQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRC 256
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITP 435
+ GQG +A+ FS + G PD F I AC G + EG ++F+ M +Y I P
Sbjct: 257 FAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIP 316
Query: 436 RIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
+EH+ LV +L G +DEA ++ M EPN +W TL++ RV+ ++ +G D +
Sbjct: 317 CMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMV 374
Query: 496 LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAG 555
QL + N +KAG + K +R+ K P N + AG
Sbjct: 375 EQLDASR-------LNKESKAGLVPVKSSDLVKEKLQRMAKGP-------NYGIRYMAAG 420
Query: 556 DTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALL 615
D S P+++E+Y L L M E+GYVP + ALHDV++E K+ +L H+E+ A + L
Sbjct: 421 DISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFL 480
Query: 616 NT-HESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
+T S IR+ KNLRVC DCH A KL+SKIVGRE++ RD RFHH KDG+CSC +YW
Sbjct: 481 DTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 196/325 (60%), Gaps = 2/325 (0%)
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
+F + ++++VSW MI+ + + + LY +M KS +P+ T ++L AC A
Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGA 236
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA 375
L GR +H L+ L + NSLI MY +CG L+DA ++FD+ +DV SW S+I+
Sbjct: 237 LGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAG 296
Query: 376 YGMTGQGCNALALFSEMQ-NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
Y G A+ LF M SG PD I ++ +LS+C H+GL++EG+ +F M + + +
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLK 355
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
P + H++CLVDLLGR G + EA ++I+ MP++PN +WG+LL SCRV+ ++ G+ AA+
Sbjct: 356 PELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE 415
Query: 495 LLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLA 554
L L P+ + +V L+N+YA G WKE VR LMK + ++ PG S +E+N+ V F A
Sbjct: 416 RLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKA 475
Query: 555 GDTSHPQSKEIYEELYVLVGKMKEL 579
D S+ + EI L+ L+ M+ L
Sbjct: 476 EDGSNCRMLEIVHVLHCLIDHMEFL 500
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 149/303 (49%), Gaps = 15/303 (4%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
LG L+ Y GE A KVF+E+ ERNVV + MI + + L ++ +M
Sbjct: 157 LGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKST 216
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
P++YT+ +L AC+ S L G +H L + L L + N LISMY KCG L +A
Sbjct: 217 SDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCR-EMDDLGQKPDAGTMASLMPAVTNT 245
+ D+ +DVVSWNSM+AGYAQ+ A+E+ M G KPDA T ++ + +
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 246 SSDNVLYVKDIFINLE-----KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
++ F NL K L ++ ++ + + + A++L +E ++P++
Sbjct: 337 ---GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALEL---IENMPMKPNS 390
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLEN-SLIDMYARCGCLEDAQKVFD 359
+ S+L +C + G R E ER L P+ + L ++YA G ++A V
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAE--ERLMLEPDCAATHVQLANLYASVGYWKEAATVRK 448
Query: 360 KMK 362
MK
Sbjct: 449 LMK 451
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 132/283 (46%), Gaps = 35/283 (12%)
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G+ D Y +++C + + R G H LK ++++G+ L+ +Y G + A
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 186 RYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
V +EMP R+VVSW +M++G+AQ R D L++ +M P+ T +L+ A T +
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 246 SS----------------DNVLYVKD-----------------IFINLEKKSLVSWNVMI 272
+ + L++ + IF K +VSWN MI
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI 294
Query: 273 TVYMKNSMPGNAIDLY-LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
Y ++ + AI+L+ L M KS +PDAIT VL +C + GR+ + L
Sbjct: 295 AGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGL 354
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLI 373
+P L + L+D+ R G L++A ++ + M + + W SL+
Sbjct: 355 KPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 10/208 (4%)
Query: 299 DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVF 358
DA +S + +CG G H + ++ L +SL+ +Y G +E+A KVF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 359 DKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLE 418
++M R+V SWT++IS + + L L+S+M+ S P+ F A+LSAC+ SG L
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 419 EGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERV--WGTLL 476
+G+ Q T + + L+ + + G + +A+ + Q N+ V W +++
Sbjct: 239 QGRSVHCQ-TLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQF---SNKDVVSWNSMI 294
Query: 477 SSCRVYSNMDIGLLAADNLLQLSPEQSG 504
+ Y+ + + A + L +L +SG
Sbjct: 295 AG---YAQHGLAMQAIE-LFELMMPKSG 318
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
++VH + +++ + L+ Y CG+ A ++FD+ S ++VV +N MI Y +
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 110 RWYNDALLVFREMV-NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFV 168
A+ +F M+ G +PD TY VL +C + ++ G + M + L L
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 169 GNGLISMYGKCGCLLEARYVLDEMPRR-DVVSWNSMV 204
+ L+ + G+ G L EA +++ MP + + V W S++
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 252/497 (50%), Gaps = 37/497 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ Y G A +F + + NVV +N +I +V+ + AL M G D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVD-KGSPRALEFLVRMQREGLVLD 237
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+ PC LKACS L G QLH ++K L+ + F + LI MY CG L+ A V
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH 297
Query: 191 E---MPRRDVVSWNSMVAG-----------------YAQNMRFDD-----ALEVCREMDD 225
+ V WNSM++G Y ++ FD AL++C +
Sbjct: 298 QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVN 357
Query: 226 L--GQKPDAGTMAS------LMPAVTNTSSDNVLYVKD---IFINLEKKSLVSWNVMITV 274
L G + + + S ++ ++ NV ++D +F L K +++++ +I
Sbjct: 358 LRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRG 417
Query: 275 YMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN 334
+K+ A L+ ++ K ++ D +++L C L++L G++IH +K
Sbjct: 418 CVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE 477
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQN 394
+ +L+DMY +CG +++ +FD M RDV SWT +I +G G+ A F +M N
Sbjct: 478 PVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN 537
Query: 395 SGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVD 454
GI P+ + F+ +LSAC HSGLLEE + + M +Y + P +EH+ C+VDLLG+AG
Sbjct: 538 IGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 455 EAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYA 514
EA ++I +MPLEP++ +W +LL++C + N + + A+ LL+ P+ Y LSN YA
Sbjct: 598 EANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYA 657
Query: 515 KAGRWKEVTEVRSLMKR 531
G W ++++VR K+
Sbjct: 658 TLGMWDQLSKVREAAKK 674
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/559 (24%), Positives = 239/559 (42%), Gaps = 124/559 (22%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDN-YTYPCVLKACS 142
A KVFDE+SERN+V + M+ Y ++ N A+ ++R M++ N + Y VLKAC
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 143 CSDNLRFGL---------QLHGAMLKVRLDWNLFVGNG---------------------- 171
+++ G+ L G ++ + +++V NG
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT 178
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN--------------------- 210
LIS Y K G + EA + MP+ +VVSWN +++G+
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDG 238
Query: 211 ---------------MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKD 255
+ L C L P A +++L+ +N S ++Y D
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFA--ISALIDMYSNCGS--LIYAAD 294
Query: 256 IFINLEK----KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+F + EK S+ WN M++ ++ N A+ L LQ+ +S++ D+ T + L C
Sbjct: 295 VF-HQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI 353
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
+ L LG ++H V + ++ + L+D++A G ++DA K+F ++ +D+ +++
Sbjct: 354 NYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 372 LISAYGMTGQGCNALA--LFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK-------- 421
LI G G N+LA LF E+ G+ D IL CS L GK
Sbjct: 414 LIR--GCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIK 471
Query: 422 -------VYFKQMTDDYRITPRIEHFACLVDLL---------------GRAGRVDEAYDV 459
V + D Y I++ L D + G+ GRV+EA+
Sbjct: 472 KGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRY 531
Query: 460 IKQM---PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSG------YYVLLS 510
+M +EPN+ + LLS+CR +S + L A + L+ + G +Y +
Sbjct: 532 FHKMINIGIEPNKVTFLGLLSACR-HSGL---LEEARSTLETMKSEYGLEPYLEHYYCVV 587
Query: 511 NIYAKAGRWKEVTEVRSLM 529
++ +AG ++E E+ + M
Sbjct: 588 DLLGQAGLFQEANELINKM 606
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 176/422 (41%), Gaps = 77/422 (18%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREM----------VNGGFR 128
GE A + IS+ NV N +I YV+ R +DA VF EM + G+
Sbjct: 24 GESIQAHVIKQGISQ-NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 129 PDN----------------------YTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL 166
D + Y VLKAC +++ G+ ++ + K L ++
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDV 142
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
+ N ++ MY K G L+EA E+ R SWN++++GY + D+A+
Sbjct: 143 VLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV--------- 193
Query: 227 GQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
T+ MP + ++VSWN +I+ ++ P A++
Sbjct: 194 -------TLFHRMP---------------------QPNVVSWNCLISGFVDKGSP-RALE 224
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYA 346
++M++ + D L AC L +G+++H V + L + ++LIDMY+
Sbjct: 225 FLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYS 284
Query: 347 RCGCLEDAQKVFDKMKF---RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
CG L A VF + K VA W S++S + + + AL L ++ S + D
Sbjct: 285 NCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYT 344
Query: 404 FVAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
L C + L G +V+ + Y + + + LVDL G + +A+ + +
Sbjct: 345 LSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFHR 402
Query: 463 MP 464
+P
Sbjct: 403 LP 404
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 143/316 (45%), Gaps = 9/316 (2%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VH+ ++ + +G L+ +A G A K+F + ++++ ++ +IR V +
Sbjct: 363 QVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSG 422
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGN 170
+ + A +FRE++ G D + +LK CS +L +G Q+HG +K +
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTAT 482
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
L+ MY KCG + + D M RDVVSW ++ G+ QN R ++A +M ++G +P
Sbjct: 483 ALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEP 542
Query: 231 DAGTMASLMPAVTNTS----SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
+ T L+ A ++ + + L LE L + ++ + + + A +
Sbjct: 543 NKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPY-LEHYYCVVDLLGQAGLFQEANE 601
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYA 346
L + K +EPD S+L ACG L I E + K + + SL + YA
Sbjct: 602 L---INKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKL-LKGFPDDPSVYTSLSNAYA 657
Query: 347 RCGCLEDAQKVFDKMK 362
G + KV + K
Sbjct: 658 TLGMWDQLSKVREAAK 673
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 144/347 (41%), Gaps = 50/347 (14%)
Query: 138 LKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV 197
L+ C + G + ++K + N+F+ N +ISMY L +A V DEM R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 198 VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD---NVLYVK 254
V+W +MV+GY + + + A+E+ R M D ++ M S + D +L +
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
I + +V N ++ +Y+KN
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKN------------------------------------ 155
Query: 315 ALLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
GR I K+ LRP+ N+LI Y + G +++A +F +M +V SW LI
Sbjct: 156 ----GRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLI 211
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK-VYFKQMTDDYR 432
S + G AL MQ G+ D A L ACS GLL GK ++ +
Sbjct: 212 SGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLE 270
Query: 433 ITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER--VWGTLLS 477
+P + L+D+ G + A DV Q L N VW ++LS
Sbjct: 271 SSPF--AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 93/175 (53%), Gaps = 3/175 (1%)
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
A+ L CG + A G I +V ++ + N+ + N++I MY L DA KVFD+M
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNS-GISPDHIAFVAILSACSHSGLLEEGKV 422
R++ +WT+++S Y G+ A+ L+ M +S + + + A+L AC G ++ G +
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
++++ + + + +VD+ + GR+ EA K++ L P+ W TL+S
Sbjct: 129 VYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLIS 181
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 236/435 (54%), Gaps = 42/435 (9%)
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP 193
+ +L+ C + G+++H + L NL + + L+ +Y CG A V D M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 194 RRDV--VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS---- 247
+RD +WNS+++GYA+ +++DA+ + +M + G KPD T ++ A S
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 248 -----------------------------DNVLYVKDIFINLEKKSLVSWNVMITVYMKN 278
+++ +++F + K VSWN M+T Y+ +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 279 SMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLE 338
+ A+D++ M ++ +EPD + +SVL + + GR++H +V R+ + L +
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 339 NSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGIS 398
N+LI +Y++ G L A +FD+M RD SW ++ISA+ + N L F +M +
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS---KNSNGLKYFEQMHRANAK 388
Query: 399 PDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYD 458
PD I FV++LS C+++G++E+G+ F M+ +Y I P++EH+AC+V+L GRAG ++EAY
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 459 -VIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAG 517
++++M LE VWG LL +C ++ N DIG +AA L +L P+ + LL IY+KA
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 518 RWKEVTEVRSLMKRR 532
R ++V VR +M R
Sbjct: 509 RAEDVERVRQMMVDR 523
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 207/434 (47%), Gaps = 76/434 (17%)
Query: 66 SLGI--KLMRAYAACGEPGTARKVFDEISERNV--VFYNVMIRSYVNNRWYNDALLVFRE 121
+LGI KL+R YA+CG A +VFD +S+R+ +N +I Y Y DA+ ++ +
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 122 MVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGC 181
M G +PD +T+P VLKAC +++ G +H ++K ++++V N L+ MY KCG
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 182 LLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
+++AR V D +P +D VSWNSM+ GY + +AL++ R M G +PD ++S++
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR 305
Query: 242 VTNTSSDN----------------------VLYVKD--------IFINLEKKSLVSWNVM 271
V + VLY K IF + ++ VSWN +
Sbjct: 306 VLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAI 365
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK-K 330
I+ + KNS N + + QM ++ +PD IT SVL C + + G R+ + ++
Sbjct: 366 ISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYG 422
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFS 390
+ P + ++++Y R G +E+ AY M
Sbjct: 423 IDPKMEHYACMVNLYGRAGMMEE---------------------AYSMI----------- 450
Query: 391 EMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH-FACLVDLLGR 449
+Q G+ + A+L AC G + G+V +++ + + P EH F L+ + +
Sbjct: 451 -VQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRL---FELEPDNEHNFELLIRIYSK 506
Query: 450 AGRVDEAYDVIKQM 463
A R ++ + ++QM
Sbjct: 507 AKRAEDV-ERVRQM 519
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 124/255 (48%), Gaps = 16/255 (6%)
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLED 353
S EP+ AS+L C L A+ G R+H + LR NL + + L+ +YA CG E
Sbjct: 88 SLTEPEIF--ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV 145
Query: 354 AQKVFDKMKFRDVA--SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC 411
A +VFD+M RD + +W SLIS Y GQ +A+AL+ +M G+ PD F +L AC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 412 SHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERV 471
G ++ G+ + + + + LV + + G + +A +V +P +
Sbjct: 206 GGIGSVQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-HKDYVS 263
Query: 472 WGTLLSS----CRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRS 527
W ++L+ ++ +DI L N ++ P++ V +S++ A+ +K ++
Sbjct: 264 WNSMLTGYLHHGLLHEALDIFRLMVQNGIE--PDK----VAISSVLARVLSFKHGRQLHG 317
Query: 528 LMKRRRIRKTPGISN 542
+ RR + ++N
Sbjct: 318 WVIRRGMEWELSVAN 332
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/448 (31%), Positives = 229/448 (51%), Gaps = 42/448 (9%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
YN +IRSY+ Y +L +F M+ +P+N T+P ++KA S ++ +G+ LHG L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
K W+ FV + YG+ G L +R + D++ VV+ NS++ +N D A E
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 219 VCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKN 278
+ M V D+ VSW +I + K
Sbjct: 174 YFQRMP----------------------------VTDV---------VSWTTVINGFSKK 196
Query: 279 SMPGNAIDLY---LQMEKSEVEPDAITCASVLPACG--DLSALLLGRRIHEYVERKKLRP 333
+ A+ ++ +Q E++ + P+ T SVL +C D + LG++IH YV K++
Sbjct: 197 GLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIIL 256
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ 393
L +L+DMY + G LE A +FD+++ + V +W ++ISA G+ AL +F M+
Sbjct: 257 TTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMK 316
Query: 394 NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRV 453
+S + P+ I +AIL+AC+ S L++ G F + +Y+I P EH+ C+VDL+GRAG +
Sbjct: 317 SSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLL 376
Query: 454 DEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIY 513
+A + I+ +P EP+ V G LL +C+++ N ++G L+ L P+ G YV LS
Sbjct: 377 VDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFN 436
Query: 514 AKAGRWKEVTEVRSLMKRRRIRKTPGIS 541
A W E ++R M IRK P S
Sbjct: 437 ALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 30/265 (11%)
Query: 77 ACGEPGT---ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN---GGFRPD 130
ACG G A + F + +VV + +I + + AL+VF EM+ P+
Sbjct: 161 ACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPN 220
Query: 131 NYTYPCVLKACSCSDN--LRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
T+ VL +C+ D +R G Q+HG ++ + +G L+ MYGK G L A +
Sbjct: 221 EATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTI 280
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSD 248
D++ + V +WN++++ A N R ALE+ M P+ T+ +++ A +
Sbjct: 281 FDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSK-- 338
Query: 249 NVLYVKDIFINLEKKSLVSWNVMITVYMKNSM------PGNAIDLYLQMEKSEVEPDAIT 302
+ D+ I L + ++ T + G +D ++ EPDA
Sbjct: 339 ----LVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASV 394
Query: 303 CASVLPACGDLSALLLGRRIHEYVE 327
++L AC +IHE E
Sbjct: 395 LGALLGAC----------KIHENTE 409
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/527 (28%), Positives = 254/527 (48%), Gaps = 70/527 (13%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H + L + L L+ YA + A +F E+ E NVV +N+MI +
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQE 328
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ ++ M + GF+P+ T VL AC S ++ G
Sbjct: 329 YRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG------------------- 369
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
R + +P+ V +WN+M++GY+ +++A+ R+M K
Sbjct: 370 ----------------RRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK 413
Query: 230 PDAGTMASLMPAVT--------------------NTSSDNVLYVKDIFINLEKKSL---- 265
PD T++ ++ + + +S V + ++ EK +
Sbjct: 414 PDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECI 473
Query: 266 ----------VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE-PDAITCASVLPACGDLS 314
WN MI+ + N + A+ L+ +M ++ V P+ + A+VL +C L
Sbjct: 474 FDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLC 533
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
+LL GR+ H V + + +E +L DMY +CG ++ A++ FD + ++ W +I
Sbjct: 534 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 593
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRIT 434
YG G+G A+ L+ +M +SG PD I FV++L+ACSHSGL+E G M + I
Sbjct: 594 GYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIE 653
Query: 435 PRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
P ++H+ C+VD LGRAGR+++A + + P + + +W LLSSCRV+ ++ + A+
Sbjct: 654 PELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEK 713
Query: 495 LLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGIS 541
L++L P+ S YVLLSN Y+ +W + ++ LM + R+ KTPG S
Sbjct: 714 LMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 201/428 (46%), Gaps = 20/428 (4%)
Query: 63 ENPSLGIKLMRAYAACG---EPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVF 119
+N +G L+ YA CG + G +VF+ +S+ N V Y +I +A+ +F
Sbjct: 171 KNIFVGNALLSMYAKCGFIVDYGV--RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF 228
Query: 120 REMVNGGFRPDNYTYPCVL------KACSCSDNL---RFGLQLHGAMLKVRLDWNLFVGN 170
R M G + D+ +L + C + G Q+H L++ +L + N
Sbjct: 229 RLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNN 288
Query: 171 GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKP 230
L+ +Y K + A + EMP +VVSWN M+ G+ Q R D ++E M D G +P
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 231 DAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ 290
+ T S++ A S +V + IF ++ + S+ +WN M++ Y AI + Q
Sbjct: 349 NEVTCISVLGACFR--SGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 291 MEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGC 350
M+ ++PD T + +L +C L L G++IH V R ++ N + + LI +Y+ C
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 351 LEDAQKVFDK-MKFRDVASWTSLISAYGMTGQGCNALALFSEM-QNSGISPDHIAFVAIL 408
+E ++ +FD + D+A W S+IS + AL LF M Q + + P+ +F +L
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 409 SACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPN 468
S+CS L G+ + + ++ A L D+ + G +D A + L N
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFFDAV-LRKN 584
Query: 469 ERVWGTLL 476
+W ++
Sbjct: 585 TVIWNEMI 592
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 191/446 (42%), Gaps = 109/446 (24%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEIS----------------- 92
K +H ++ + + L +L+ Y CG+ ARKVFDE+S
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 93 --------------ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVL 138
ER+VV +N MI V + AL+V++ MV GF P +T VL
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 139 KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLE-ARYVLDEMPRRDV 197
ACS + FG++ HG +K LD N+FVGN L+SMY KCG +++ V + + + +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNE 205
Query: 198 VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP-AVTNTSSDNV------ 250
VS+ +++ G A+ + +A+++ R M + G + D+ +++++ + D++
Sbjct: 206 VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGN 265
Query: 251 ---------------------------LYVKD--------IFINLEKKSLVSWNVMITVY 275
+Y K+ IF + + ++VSWN+MI +
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 325
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+ +++ +M S +P+ +TC SVL AC
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------------------------- 360
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
R G +E +++F + V++W +++S Y A++ F +MQ
Sbjct: 361 ----------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 396 GISPDHIAFVAILSACSHSGLLEEGK 421
+ PD ILS+C+ LE GK
Sbjct: 411 NLKPDKTTLSVILSSCARLRFLEGGK 436
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 162/361 (44%), Gaps = 51/361 (14%)
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
+++ N ++ K G L EA V D MP RDVVSWN+M++ + + AL V + M
Sbjct: 71 DVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV 130
Query: 225 DLGQKPDAGTMASLMPAVT----------------NTSSDNVLYVKD------------- 255
G P T+AS++ A + T D ++V +
Sbjct: 131 CDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIV 190
Query: 256 -----IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLP-- 308
+F +L + + VS+ +I + + A+ ++ M + V+ D++ +++L
Sbjct: 191 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 250
Query: 309 ----ACGDLSALL---LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
C LS + LG++IH R +L L NSL+++YA+ + A+ +F +M
Sbjct: 251 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 310
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
+V SW +I +G + ++ + M++SG P+ + +++L AC SG +E G+
Sbjct: 311 PEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 422 VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVWGTLLSS 478
F + P + + ++ +EA +QM L+P++ +LSS
Sbjct: 371 RIFSSIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 479 C 479
C
Sbjct: 426 C 426
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 24/242 (9%)
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
AS+L D L G+ IH ++ R ++ + L N L+D+Y CG + A+KVFD+M
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 364 RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVY 423
RDV SW + ++ G A +F M D +++ ++S G E+ V
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPER----DVVSWNNMISVLVRKGFEEKALVV 125
Query: 424 FKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA------YDVIKQMPLEPNERVWGTLLS 477
+K+M D + R L +L +V + + V + L+ N V LLS
Sbjct: 126 YKRMVCDGFLPSRFT----LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLS 181
Query: 478 SCRVYSN----MDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRR 533
+Y+ +D G+ ++L Q P + Y ++ + A+ + E ++ LM +
Sbjct: 182 ---MYAKCGFIVDYGVRVFESLSQ--PNEVSYTAVIGGL-ARENKVLEAVQMFRLMCEKG 235
Query: 534 IR 535
++
Sbjct: 236 VQ 237
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 228/446 (51%), Gaps = 70/446 (15%)
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
+N ++RSY+ + DA+ V+ MV PD Y+ P V+KA +Q+H
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKA---------AVQIH--- 131
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
+ +G L S+ + G +V DE ++ Y + F++A
Sbjct: 132 -------DFTLGKELHSVAVRLG------FVGDEFCESGFITL------YCKAGEFENAR 172
Query: 218 EVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMK 277
+V E N E+K L SWN +I
Sbjct: 173 KVFDE------------------------------------NPERK-LGSWNAIIGGLNH 195
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL--RPNL 335
A+++++ M++S +EPD T SV +CG L L L ++H+ V + K + ++
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
++ NSLIDMY +CG ++ A +F++M+ R+V SW+S+I Y G AL F +M+
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
G+ P+ I FV +LSAC H GL+EEGK YF M ++ + P + H+ C+VDLL R G++ E
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
Query: 456 AYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAK 515
A V+++MP++PN VWG L+ C + ++++ A +++L P G YV+L+N+YA
Sbjct: 376 AKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYAL 435
Query: 516 AGRWKEVTEVRSLMKRRRIRKTPGIS 541
G WK+V VR LMK +++ K P S
Sbjct: 436 RGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 176/371 (47%), Gaps = 15/371 (4%)
Query: 7 RNISKLQALVSSFQKSLASFQSPVI----AVELLGKALDQYPDIIALKNVHTKLIYLNSH 62
R+ + ++ + + Q L +S V+ ++ ++ KA Q D K +H+ + L
Sbjct: 90 RSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFV 149
Query: 63 ENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREM 122
+ + Y GE ARKVFDE ER + +N +I + N+A+ +F +M
Sbjct: 150 GDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDM 209
Query: 123 VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD--WNLFVGNGLISMYGKCG 180
G PD++T V +C +L QLH +L+ + + ++ + N LI MYGKCG
Sbjct: 210 KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCG 269
Query: 181 CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
+ A ++ +EM +R+VVSW+SM+ GYA N +ALE R+M + G +P+ T ++
Sbjct: 270 RMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLS 329
Query: 241 AVTNTS--SDNVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
A + + Y + E + L + ++ + ++ A + +E+ ++
Sbjct: 330 ACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV---VEEMPMK 386
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP-NLLLENSLIDMYARCGCLEDAQK 356
P+ + ++ C + + + Y+ +L P N + L ++YA G +D ++
Sbjct: 387 PNVMVWGCLMGGCEKFGDVEMAEWVAPYM--VELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 357 VFDKMKFRDVA 367
V MK + VA
Sbjct: 445 VRKLMKTKKVA 455
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 205/363 (56%), Gaps = 12/363 (3%)
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
CG+ L + +H + +L + L++MY+ CG +A VF+KM +++ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
+I + G G +A+ +FS + G PD F I AC G ++EG ++F+ M+
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
DY I P IE + LV++ G +DEA + +++MP+EPN VW TL++ RV+ N+++G
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV 549
A+ + L P + K R + S +++ ++K GI + + S +
Sbjct: 444 YCAEVVEFLDPTR----------LNKQSREGFIPVKASDVEKESLKKRSGILH-GVKSSM 492
Query: 550 HTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLA 609
F AGDT+ P++ E+++ L L M E+GYV ET ALHD+++E KE L HSE++A
Sbjct: 493 QEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIA 552
Query: 610 IVFALLNTH-ESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
A+LN+ P + KNLRVC DCH A K++S IVGRE++ RD RFH K+G C+C
Sbjct: 553 FARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCK 612
Query: 669 DYW 671
DYW
Sbjct: 613 DYW 615
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 36 LGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERN 95
L K + + K VH K+ SH + S L+ Y+ CG A VF+++SE+N
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 96 VVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHG 155
+ + ++IR + N + DA+ +F G PD + + AC ++ GL
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 156 AMLKVRLDWNL------FVGNGLISMYGKCGCLLEARYVLDEMPRR-DVVSWNSMV 204
+M + D+ + +V L+ MY G L EA ++ MP +V W +++
Sbjct: 380 SMSR---DYGIAPSIEDYV--SLVEMYALPGFLDEALEFVERMPMEPNVDVWETLM 430
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 247/482 (51%), Gaps = 44/482 (9%)
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLI--SMYGKCGCLLE 184
F+ + LK CS +L LQ+HG + L + F+ + L+ S L
Sbjct: 9 FKSRKHQCLIFLKLCSSIKHL---LQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAF 65
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--- 241
AR +L +WN + GY+ + +++ V EM G KP+ T L+ A
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 242 -------------VTNTSSDNVLYV-----------------KDIFINLEKKSLVSWNVM 271
V D +YV + +F + ++++VSWN +
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
+T ++N + + +M PD T +L ACG L LG+ +H V ++L
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVREL 243
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
N L +L+DMYA+ G LE A+ VF++M ++V +W+++I G AL LFS+
Sbjct: 244 ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSK 303
Query: 392 M-QNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA 450
M + S + P+++ F+ +L ACSH+GL+++G YF +M ++I P + H+ +VD+LGRA
Sbjct: 304 MMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRA 363
Query: 451 GRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMD---IGLLAADNLLQLSPEQSGYYV 507
GR++EAYD IK+MP EP+ VW TLLS+C ++ + D IG L++L P++SG V
Sbjct: 364 GRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLV 423
Query: 508 LLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYE 567
+++N +A+A W E EVR +MK +++K G S +EL H F +G + IYE
Sbjct: 424 IVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYE 483
Query: 568 EL 569
L
Sbjct: 484 LL 485
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 175/369 (47%), Gaps = 42/369 (11%)
Query: 46 IIALKNVHTKLIYLNSHENPSLGI-KLMR--AYAACGEPGTARKVFDEISERNVVFYNVM 102
I L +H + I+L+S +N S I +L+R + + + AR + S+ +N++
Sbjct: 26 IKHLLQIHGQ-IHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNML 84
Query: 103 IRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRL 162
R Y ++ +++ V+ EM G +P+ T+P +LKAC+ L G Q+ +LK
Sbjct: 85 SRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGF 144
Query: 163 DWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCRE 222
D++++VGN LI +YG C +AR V DEM R+VVSWNS++ +N + + E E
Sbjct: 145 DFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCE 204
Query: 223 MDDLGQK--PDAGTMASLMPAVTN-------------------------------TSSDN 249
M +G++ PD TM L+ A S
Sbjct: 205 M--IGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGG 262
Query: 250 VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK-SEVEPDAITCASVLP 308
+ Y + +F + K++ +W+ MI + A+ L+ +M K S V P+ +T VL
Sbjct: 263 LEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLC 322
Query: 309 ACGDLSALLLG-RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DV 366
AC + G + HE + K++P ++ +++D+ R G L +A KM F D
Sbjct: 323 ACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDA 382
Query: 367 ASWTSLISA 375
W +L+SA
Sbjct: 383 VVWRTLLSA 391
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 9/280 (3%)
Query: 35 LLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER 94
L KA + + A + + +++ + +G L+ Y C + ARKVFDE++ER
Sbjct: 118 FLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTER 177
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
NVV +N ++ + V N N F EM+ F PD T +L A C NL G +H
Sbjct: 178 NVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSA--CGGNLSLGKLVH 235
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
++ L+ N +G L+ MY K G L AR V + M ++V +W++M+ G AQ +
Sbjct: 236 SQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAE 295
Query: 215 DALEV-CREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDI-FINLEKKSLVSWNV 270
+AL++ + M + +P+ T ++ A ++T D Y ++ I+ K ++ +
Sbjct: 296 EALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGA 355
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
M+ + + A D ++K EPDA+ ++L AC
Sbjct: 356 MVDILGRAGRLNEAYDF---IKKMPFEPDAVVWRTLLSAC 392
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/503 (29%), Positives = 236/503 (46%), Gaps = 76/503 (15%)
Query: 49 LKNVHTKLIYLN-SHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYV 107
LK +H ++I + SH L L + C A + +I +V YN +I S V
Sbjct: 25 LKQIHAQIITIGLSHHTYPLSKLLHLSSTVC--LSYALSILRQIPNPSVFLYNTLISSIV 82
Query: 108 NNRWYNDALLVFR------EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR 161
+N L F + RP+ +TYP
Sbjct: 83 SNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYP-------------------------- 116
Query: 162 LDWNLFVGNGLISMYGKCGCLLEARYV-LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVC 220
+LF +G + + + G L A + E D ++V YA + +A
Sbjct: 117 ---SLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREA---- 169
Query: 221 REMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSM 280
+ +F + + L +WN ++ Y +
Sbjct: 170 ---------------------------------RSLFERIREPDLATWNTLLAAYANSEE 196
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
+ ++ L + +V P+ ++ +++ +C +L + G H YV + L N + S
Sbjct: 197 IDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTS 256
Query: 341 LIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
LID+Y++CGCL A+KVFD+M RDV+ + ++I + G G + L+ + + G+ PD
Sbjct: 257 LIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPD 316
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI 460
FV +SACSHSGL++EG F M Y I P++EH+ CLVDLLGR+GR++EA + I
Sbjct: 317 SATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECI 376
Query: 461 KQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWK 520
K+MP++PN +W + L S + + + + G +A +LL L E SG YVLLSNIYA RW
Sbjct: 377 KKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWT 436
Query: 521 EVTEVRSLMKRRRIRKTPGISNV 543
+V + R LMK R+ K+PGIS +
Sbjct: 437 DVEKTRELMKDHRVNKSPGISTL 459
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 229/424 (54%), Gaps = 50/424 (11%)
Query: 130 DNYTYPCVLKACSCSDNLRF-----GLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLE 184
D++TY +LKA S N RF G+ LHG LK+ + +++V L+ MY G +++
Sbjct: 120 DSFTYLFLLKA---SSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMID 176
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
A V DEMP R+ V+WN M+ G F+ AL +M +
Sbjct: 177 AHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN------------------- 217
Query: 245 TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITC 303
+++VSW +I Y + P AI L+ +M + ++P+ IT
Sbjct: 218 ------------------RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITI 259
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRP-NLLLENSLIDMYARCGCLEDAQKVFDKMK 362
++LPA +L L + +H YV ++ P ++ + NSLID YA+CGC++ A K F ++
Sbjct: 260 LAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIP 319
Query: 363 --FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
+++ SWT++ISA+ + G G A+++F +M+ G+ P+ + +++L+ACSH GL EE
Sbjct: 320 NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEE 379
Query: 421 KV-YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
+ +F M ++Y+ITP ++H+ CLVD+L R GR++EA + ++P+E VW LL +C
Sbjct: 380 FLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGAC 439
Query: 480 RVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPG 539
VY + ++ L++L G YVL+SNI+ GR+ + R M R + K PG
Sbjct: 440 SVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPG 499
Query: 540 ISNV 543
S V
Sbjct: 500 HSQV 503
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 166/395 (42%), Gaps = 49/395 (12%)
Query: 15 LVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRA 74
+S KSL F S L + ++P ++ +H + L + + L+
Sbjct: 108 FLSDHNKSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGM 167
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVN---------------NR----WYN-- 113
Y G A KVFDE+ ERN V +NVMI N NR W
Sbjct: 168 YLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTII 227
Query: 114 ----------DALLVFREMVN-GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRL 162
+A+L+F MV +P+ T +L A +L+ +H + K
Sbjct: 228 DGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGF 287
Query: 163 -DWNLFVGNGLISMYGKCGCLLEARYVLDEMP--RRDVVSWNSMVAGYAQNMRFDDALEV 219
++ V N LI Y KCGC+ A E+P R+++VSW +M++ +A + +A+ +
Sbjct: 288 VPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSM 347
Query: 220 CREMDDLGQKPDAGTMASLMPAVTN--TSSDNVLYVKDIFINLEKKS--LVSWNVMITVY 275
++M+ LG KP+ TM S++ A ++ + + L + +N K + + + ++ +
Sbjct: 348 FKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDML 407
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEY---VERKKLR 332
+ A + L++ +E A+ +L AC L R+ +ER
Sbjct: 408 RRKGRLEEAEKIALEI---PIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGG 464
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
+L+ N ++ G DAQ+ +M R VA
Sbjct: 465 DYVLMSN----IFCGTGRFLDAQRFRKQMDVRGVA 495
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 249/509 (48%), Gaps = 60/509 (11%)
Query: 75 YAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN--GGFRPDNY 132
Y CG A +F + R++V +N MI ++ N + + A +F+E+V+ +
Sbjct: 439 YGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
T +L +C SD+L FG +H + K+ G L A L+ M
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKL-------------------GDLTSAFLRLETM 539
Query: 193 PR-RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ-KPDAGTMASLMPAVTN------ 244
RD+ SWNS+++G A + ++L + M G+ + D T+ + A N
Sbjct: 540 SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQ 599
Query: 245 ----------------TSSDNVLYV-----KDI------FINLEKKSLVSWNVMITVYMK 277
T N L KDI F + +L SWN +I+ +
Sbjct: 600 GRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQ 659
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
N L+ ++ +EP+ IT +L A L + G + H ++ R+ + N +
Sbjct: 660 NKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFV 716
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQ-NSG 396
+L+DMY+ CG LE KVF +++W S+ISA+G G G A+ LF E+ NS
Sbjct: 717 SAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSE 776
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
+ P+ +F+++LSACSHSG ++EG Y+KQM + + + P EH +VD+LGRAG++ EA
Sbjct: 777 MEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREA 836
Query: 457 YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKA 516
Y+ I + VWG LLS+C + + +G A+ L ++ P+ + YY+ L+N Y
Sbjct: 837 YEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGL 896
Query: 517 GRWKEVTEVRSLMKRRRIRKTPGISNVEL 545
G W+E +R +++ ++K PG S +++
Sbjct: 897 GGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 217/473 (45%), Gaps = 38/473 (8%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN- 124
S+G ++ Y+ CG+ A VF+E+ R+V+ N ++ + N + +A + +M +
Sbjct: 327 SVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN-LFVGNGLISMYGKCGCLL 183
+PD T + C R G +HG +++ + L V N +I MYGKCG
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 184 EARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
+A + RD+VSWNSM++ ++QN A + +E+ ++++++ +T
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS-EYSCSKFSLSTVLAILT 505
Query: 244 NT-SSDNVLYVKDI-------------FINLEKKS----LVSWNVMITVYMKNSMPGNAI 285
+ SSD++++ K + F+ LE S L SWN +I+ + ++
Sbjct: 506 SCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 286 DLYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDM 344
+ M + ++ D IT + A G+L +L GR H + + L+N+LI M
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 345 YARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAF 404
Y RC +E A KVF + ++ SW +ISA G LF +N + P+ I F
Sbjct: 626 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEITF 682
Query: 405 VAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
V +LSA + G G + + + ++ P + A LVD+ G ++ V +
Sbjct: 683 VGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRNS 740
Query: 464 PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLS------PEQSGYYVLLS 510
+ + W +++S+ + +G A + +LS P +S + LLS
Sbjct: 741 GVN-SISAWNSVISA---HGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLS 789
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 188/421 (44%), Gaps = 46/421 (10%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
KL+ Y GE ++ +FDE+ E++V+ +N MI + N Y A+ +F EM++ G
Sbjct: 127 KLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEF 186
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D+ T A S R LH ++ L + + N L+++Y K L A V
Sbjct: 187 DSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVF 246
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA------VT 243
M RD+VSWN+++ N +L+ + M GQ+ D T + ++ A +T
Sbjct: 247 THMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 244 NTSSDNVLYVKD-----------------------------IFINLEKKSLVSWNVMITV 274
S + L +K +F L + ++S N ++
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
Query: 275 YMKNSMPGNAIDLYLQMEK-SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP 333
+ N M A + QM+ +++PD T S+ CGDLS GR +H Y R +++
Sbjct: 367 FAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQS 426
Query: 334 NLL-LENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALF--- 389
L + NS+IDMY +CG A+ +F RD+ SW S+ISA+ G A LF
Sbjct: 427 RALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 390 -SEMQNSGISPDHIAFVAILSACSHSGLLEEGK---VYFKQMTDDYRITPRIEHFACLVD 445
SE S S + +AIL++C S L GK + +++ D R+E + D
Sbjct: 487 VSEYSCSKFSLSTV--LAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRD 544
Query: 446 L 446
L
Sbjct: 545 L 545
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 276/557 (49%), Gaps = 16/557 (2%)
Query: 3 PPLSR--NISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLN 60
P L+R +I L+A V SP++ L + Y + + +H +
Sbjct: 29 PALARFGSIGVLRAAVELINDGEKPDASPLVH---LLRVSGNYGYVSLCRQLHGYVTKHG 85
Query: 61 SHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFR 120
N L LMR Y A KVFDE+ + +V+ +N ++ YV + + + + +F
Sbjct: 86 FVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFL 145
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLD-WNLFVGNGLISMYGKC 179
E+ P+ +++ L AC+ G +H ++K+ L+ N+ VGN LI MYGKC
Sbjct: 146 ELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKC 205
Query: 180 GCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
G + +A V M +D VSWN++VA ++N + + L +M + PD T L+
Sbjct: 206 GFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTYNELI 261
Query: 240 PAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
A + N + + ++ + SWN ++T Y+ + G A + + +M S V D
Sbjct: 262 DAFVKSGDFNNAF--QVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFD 319
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD 359
+ + VL A L+ + G IH + L +++ ++LIDMY++CG L+ A+ +F
Sbjct: 320 EYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFW 379
Query: 360 KMKFRDVASWTSLISAYGMTGQGCNALALFSEM-QNSGISPDHIAFVAILSACSHSGL-L 417
M +++ W +IS Y G A+ LF+++ Q + PD F+ +L+ CSH + +
Sbjct: 380 TMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPM 439
Query: 418 EEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
E YF+ M ++YRI P +EH L+ +G+ G V +A VI++ + W LL
Sbjct: 440 EVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLG 499
Query: 478 SCRVYSNMDIGLLAADNLLQLS-PEQSGY-YVLLSNIYAKAGRWKEVTEVRSLMKRRRIR 535
+C ++ A +++L ++ Y Y+++SN+YA RW+EV ++R +M+ +
Sbjct: 500 ACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVL 559
Query: 536 KTPGISNVELNSQVHTF 552
K G S ++ ++ ++
Sbjct: 560 KEVGSSWIDSRTKCSSY 576
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 11/266 (4%)
Query: 267 SWNVMITVYMKNSMPG---NAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
SW+ ++ + G A++L EK PDA +L G+ + L R++H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEK----PDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGC 383
YV + N L NSL+ Y LEDA KVFD+M DV SW SL+S Y +G+
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACL 443
+ LF E+ S + P+ +F A L+AC+ L G ++ + CL
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 444 VDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQS 503
+D+ G+ G +D+A V + M E + W +++SC +++GL Q+ +
Sbjct: 199 IDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGLWF---FHQMPNPDT 254
Query: 504 GYYVLLSNIYAKAGRWKEVTEVRSLM 529
Y L + + K+G + +V S M
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDM 280
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 245/512 (47%), Gaps = 40/512 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISERN-VVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
++ AY G+ A VF E N + +N +I Y N + +AL + M G +
Sbjct: 199 MIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKW 258
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D +++ VL S +L+ G ++H +LK N FV +G++ +Y KCG + A
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 190 DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDN 249
++ S +SM+ GY+ + +A
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEA--------------------------------- 345
Query: 250 VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE-PDAITCASVLP 308
K +F +L +K+LV W M Y+ P + ++L +E PD++ SVL
Sbjct: 346 ----KRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLG 401
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
AC + + G+ IH + R + + L + +DMY++CG +E A+++FD RD
Sbjct: 402 ACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVM 461
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
+ ++I+ G + F +M G PD I F+A+LSAC H GL+ EG+ YFK M
Sbjct: 462 YNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMI 521
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM-PLEPNERVWGTLLSSCRVYSNMDI 487
+ Y I+P H+ C++DL G+A R+D+A ++++ + +E + + G L++C N ++
Sbjct: 522 EAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTEL 581
Query: 488 GLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNS 547
+ LL + Y+ ++N YA +GRW E+ +R M+ + + G S ++
Sbjct: 582 VKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDK 641
Query: 548 QVHTFLAGDTSHPQSKEIYEELYVLVGKMKEL 579
Q H F + D SH +++ IY L+ + + E+
Sbjct: 642 QFHMFTSSDISHYETEAIYAMLHFVTKDLSEI 673
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 134/621 (21%), Positives = 246/621 (39%), Gaps = 170/621 (27%)
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVF------REMV 123
+L+ Y+ G AR VFDE+ ERNV +N +I +YV +A +F R+++
Sbjct: 28 QLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLI 87
Query: 124 N-----GGFRP-------------------------DNYTYPCVLKACSCSDNLRFGLQL 153
GF D++T ++K + N+ +G QL
Sbjct: 88 TYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQL 147
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL--------DEMPR----------- 194
HG ++K D F + LI MY KCG E + D + R
Sbjct: 148 HGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREG 207
Query: 195 ---------------RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
D +SWN+++AGYAQN ++AL++ M++ G K D + +++
Sbjct: 208 DIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVL 267
Query: 240 PAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
+++ +K + I E + V N Y + +D+Y +
Sbjct: 268 NVLSS--------LKSLKIGKEVHARVLKN---GSYSNKFVSSGIVDVYCK--------- 307
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLR---PNLLLENSLIDMYARCGCLEDAQK 356
CG++ +Y E L NL +S+I Y+ G + +A++
Sbjct: 308 ----------CGNM----------KYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKR 347
Query: 357 VFDKMKFRDVASWTSLISAYGMTGQGCNALALF-SEMQNSGISPDHIAFVAILSACSHSG 415
+FD + +++ WT++ Y Q + L L + + N +PD + V++L ACS
Sbjct: 348 LFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQA 407
Query: 416 LLEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA------------------ 456
+E GK ++ + + ++ VD+ + G V+ A
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKL--VTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAM 465
Query: 457 ----------------YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ--- 497
++ + + +P+E + LLS+CR + G ++++
Sbjct: 466 IAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYN 525
Query: 498 LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV-HTFLAGD 556
+SPE +G+Y + ++Y KA R + E+ GI VE ++ + FL
Sbjct: 526 ISPE-TGHYTCMIDLYGKAYRLDKAIEL-----------MEGIDQVEKDAVILGAFLNAC 573
Query: 557 TSHPQS---KEIYEELYVLVG 574
+ + + KE+ E+L V+ G
Sbjct: 574 SWNKNTELVKEVEEKLLVIEG 594
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 217/425 (51%), Gaps = 35/425 (8%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG- 125
L L+ Y CG+ G AR+VFDEI ER++V + MI +N+ +AL +FR M++
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 310
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVR-LDWNLFVGNGLISMYGKCGCLLE 184
P++ +L L+ G ++H +LK + FV +GLI +Y KCG +
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS 370
Query: 185 ARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--- 241
R V +R+ +SW ++++GYA N RFD AL M G +PD T+A+++P
Sbjct: 371 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 430
Query: 242 ----------------------VTNTSSDNVLYVK--------DIFINLEKKSLVSWNVM 271
V+ +S V+Y K +F LE++++ +W M
Sbjct: 431 LRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAM 490
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
I Y++N I+++ M S+ PD++T VL C DL AL LG+ +H ++ +K+
Sbjct: 491 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 550
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
+ +I MY +CG L A FD + + +WT++I AYG +A+ F +
Sbjct: 551 ESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQ 610
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M + G +P+ F A+LS CS +G ++E +F M Y + P EH++ +++LL R G
Sbjct: 611 MVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCG 670
Query: 452 RVDEA 456
RV+EA
Sbjct: 671 RVEEA 675
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 211/445 (47%), Gaps = 40/445 (8%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYV-- 107
K VH + N L KL+ Y ACG A+KVFDE + NV +N ++R V
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
+ Y D L F EM G + Y+ V K+ + + LR GL+ H +K L ++F
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 168 VGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM-DDL 226
+ L+ MY KCG + AR V DE+ RD+V W +M+AG A N R +AL + R M +
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 310
Query: 227 GQKPDAGTMASLMPAVTNTSSDNV--------------------------LYVK------ 254
P++ + +++P + + + + LY K
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS 370
Query: 255 --DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+F ++++ +SW +++ Y N A+ + M++ PD +T A+VLP C +
Sbjct: 371 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 430
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSL 372
L A+ G+ IH Y + PN+ L SL+ MY++CG E ++FD+++ R+V +WT++
Sbjct: 431 LRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAM 490
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK-VYFKQMTDDY 431
I Y + +F M S PD + +L+ CS L+ GK ++ + ++
Sbjct: 491 IDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF 550
Query: 432 RITPRIEHFACLVDLLGRAGRVDEA 456
P + A ++ + G+ G + A
Sbjct: 551 ESIPFVS--ARIIKMYGKCGDLRSA 573
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 156/344 (45%), Gaps = 37/344 (10%)
Query: 115 ALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLIS 174
AL + + G + T+ +L+AC +L G Q+H + L+ N F+ L+
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 175 MYGKCGCLLEARYVLDEMPRRDVVSWNSMVAG--YAQNMRFDDALEVCREMDDLGQKPDA 232
MY CG + +A+ V DE +V SWN+++ G + R+ D L EM +LG +
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNV 214
Query: 233 GTMASLMPAVTNTSS------DNVLYVKD---------------------------IFIN 259
+++++ + S+ + L +K+ +F
Sbjct: 215 YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDE 274
Query: 260 LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE-VEPDAITCASVLPACGDLSALLL 318
+ ++ +V W MI N A+ L+ M E + P+++ ++LP GD+ AL L
Sbjct: 275 IVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKL 334
Query: 319 GRRIHEYV-ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG 377
G+ +H +V + K + + LID+Y +CG + ++VF K R+ SWT+L+S Y
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
G+ AL MQ G PD + +L C+ +++GK
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%)
Query: 13 QALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLM 72
QAL S F+ V+ + + + I K +H + N SL LM
Sbjct: 401 QALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLM 460
Query: 73 RAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNY 132
Y+ CG P ++FD + +RNV + MI YV N + VFR M+ RPD+
Sbjct: 461 VMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSV 520
Query: 133 TYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM 192
T VL CS L+ G +LHG +LK + FV +I MYGKCG L A + D +
Sbjct: 521 TMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV 580
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
+ ++W +++ Y N F DA+ +M G P+ T +++
Sbjct: 581 AVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVL 627
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 154/361 (42%), Gaps = 38/361 (10%)
Query: 35 LLGKALDQYPDIIALK---NVHTKLIYLNSH-ENPSLGIKLMRAYAACGEPGTARKVFDE 90
+L L D+ ALK VH ++ ++ E P + L+ Y CG+ + R+VF
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 91 ISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFG 150
+RN + + ++ Y N ++ AL M GFRPD T VL C+ ++ G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Query: 151 LQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQN 210
++H LK N+ + L+ MY KCG + D + +R+V +W +M+ Y +N
Sbjct: 438 KEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVEN 497
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS----------------DNVLYVK 254
+EV R M +PD+ TM ++ ++ + +++ +V
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 255 DIFINL-----------------EKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
I + K ++W +I Y N + +AI+ + QM
Sbjct: 558 ARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERK-KLRPNLLLENSLIDMYARCGCLEDAQK 356
P+ T +VL C + R + R L+P+ + +I++ RCG +E+AQ+
Sbjct: 618 PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
Query: 357 V 357
+
Sbjct: 678 L 678
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
I ++ + + A+ + +E+ + +A T +++L AC +LL G+++H ++ L
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG--CNALALF 389
N L L+ MY CG ++DAQKVFD+ +V SW +L+ ++G+ + L+ F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEG-KVYFKQMTDDYRITPRIEHFACLVDLLG 448
+EM+ G+ + + + + + + L +G K + + + + ++ LVD+
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLK--TSLVDMYF 260
Query: 449 RAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+ G+V A V ++ +E + VWG +++
Sbjct: 261 KCGKVGLARRVFDEI-VERDIVVWGAMIA 288
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 247/495 (49%), Gaps = 39/495 (7%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A +FDE+ +R++ N + S++ + ND L +F ++ ++T+ VL ACS
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
G Q+H M+K + LI MY K G L+++ V + + +D+VSWN++
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 204 VAGYAQNMRFDDALEVCR-------EMDDLGQKPDAGTMASLM---------PAVTNTSS 247
++G+ +N + +AL V E+ + T ASL V T
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 248 DNVL--------YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAI------DLYLQMEK 293
D V+ Y IN K S NV M NS+ I + +L M +
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLED 353
P+ +S L C D S L +G++IH R + L N L+DMY +CG +
Sbjct: 277 QR--PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQ 334
Query: 354 AQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEM--QNSGISPDHIAFVAILSAC 411
A+ +F + + V SWTS+I AY + G G AL +F EM + SG+ P+ + F+ ++SAC
Sbjct: 335 ARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISAC 394
Query: 412 SHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNER- 470
+H+GL++EGK F M + YR+ P EH+ C +D+L +AG +E + ++++M N+
Sbjct: 395 AHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSI 454
Query: 471 ---VWGTLLSSCRVYSNMDIGLLAADNLL-QLSPEQSGYYVLLSNIYAKAGRWKEVTEVR 526
+W +LS+C + ++ G A L+ + PE + YVL+SN YA G+W V E+R
Sbjct: 455 PCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELR 514
Query: 527 SLMKRRRIRKTPGIS 541
+K + + KT G S
Sbjct: 515 GKLKNKGLVKTAGHS 529
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 163/379 (43%), Gaps = 50/379 (13%)
Query: 39 ALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVF 98
+L YP+ + VH +I + L+ Y+ G + +VF+ + E+++V
Sbjct: 95 SLLSYPE--TGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
+N ++ ++ N +AL VF M +T V+K C+ L+ G Q+H ++
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDAL 217
D + +G +IS Y G + EA V + + D V NS+++G +N + +A
Sbjct: 213 VTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 218 EVCREMDDLGQKPDAGTMASLMPAVTNTS------------------SDN---------- 249
+ Q+P+ ++S + ++ S SD+
Sbjct: 272 LLMSR-----QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 250 -----VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM--EKSEVEPDAIT 302
++ + IF + KS+VSW MI Y N A++++ +M E S V P+++T
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 303 CASVLPACGDLSALLLGRRIHEYVERK-KLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
V+ AC + G+ ++ K +L P ID+ ++ G E+ ++ ++M
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM 446
Query: 362 KFRD-----VASWTSLISA 375
D A W +++SA
Sbjct: 447 MENDNQSIPCAIWVAVLSA 465
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 201/375 (53%), Gaps = 30/375 (8%)
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
PD + +C +L +L +++H++ + K R + L N +I M+ C + DA++V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 358 FDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLL 417
FD M +D+ SW ++ AY G G +AL LF EM G+ P+ F+ + AC+ G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 418 EEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
EE ++F M +++ I+P+ EH+ ++ +LG+ G + EA I+ +P EP W + +
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 478 SCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKT 537
R++ ++D+ + ++ + P ++ +++ I K E + + RI
Sbjct: 414 YARLHGDIDLEDYMEELMVDVDPSKA----VINKIPTPPP--KSFKETNMVTSKSRI--- 464
Query: 538 PGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDK 597
L + TF Y++ + K + YVP+T LHD+++E K
Sbjct: 465 -------LEFRNLTF-------------YKDEAKEMAAKKGVVYVPDTRFVLHDIDQEAK 504
Query: 598 EGHLAVHSEKLAIVFALLNT-HESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNR 656
E L HSE+LAI + ++ T + I KNLRVCGDCH K++SKI+GR +++RD R
Sbjct: 505 EQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKR 564
Query: 657 FHHFKDGLCSCGDYW 671
FHHFKDG CSCGDYW
Sbjct: 565 FHHFKDGKCSCGDYW 579
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
R Y DA+ E+++ G PD + + ++C+ +L ++H L+ + + +
Sbjct: 219 RLYKDAI----ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN 274
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
N +ISM+G+C + +A+ V D M +D+ SW+ M+ Y+ N DDAL + EM G K
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 230 PDAGTMASLM 239
P+ T ++
Sbjct: 335 PNEETFLTVF 344
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K VH + +P L ++ + C A++VFD + ++++ +++M+ +Y +N
Sbjct: 256 KKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDN 315
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+DAL +F EM G +P+ T+ V AC+ + LH +K +
Sbjct: 316 GMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTE 374
Query: 170 N--GLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ 209
+ G++ + GKCG L+EA + ++P + + YA+
Sbjct: 375 HYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYAR 416
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 224/474 (47%), Gaps = 62/474 (13%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ AY CG A ++F + ++V +N +I + + AL +F M GF P+
Sbjct: 256 LISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPN 315
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
TY VL S L G Q+HG ++K + + +GN LI Y KCG L ++R D
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD 375
Query: 191 EMPRRDVVSWNSMVAGYAQN---------------------MRFDDALEVC--REMDDL- 226
+ +++V WN++++GYA F AL+ C E+ L
Sbjct: 376 YIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLH 435
Query: 227 ------GQKPDAGTMASLMPA-VTNTSSDNVLYVKD------------------------ 255
G + + ++SLM + N ++ L + D
Sbjct: 436 SVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQY 495
Query: 256 -----IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC 310
+ LE+ VSWN+ I ++ I+L+ M +S + PD T S+L C
Sbjct: 496 HESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC 555
Query: 311 GDLSALLLGRRIHEYVERKKLR-PNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
L L LG IH + + + + N LIDMY +CG + KVF++ + +++ +W
Sbjct: 556 SKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITW 615
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
T+LIS G+ G G AL F E + G PD ++F++IL+AC H G+++EG F++M
Sbjct: 616 TALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-K 674
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYS 483
DY + P ++H+ C VDLL R G + EA +I++MP + VW T L C ++
Sbjct: 675 DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFA 728
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 208/496 (41%), Gaps = 78/496 (15%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ Y GE A KVFD++ ERN V +N +I+ Y + A VF EM G+ P+
Sbjct: 55 IISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPN 114
Query: 131 NYTYPCVLKACSCSD-NLRFGLQLHGAMLKVRLDW-NLFVGNGLISMYGKCGCLLEARYV 188
T +L SC+ ++R G QLHG LK L + FVG L+ +YG+ L A V
Sbjct: 115 QSTVSGLL---SCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQV 171
Query: 189 LDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS- 247
++MP + + +WN M++ + + RE+ +G + ++ V+
Sbjct: 172 FEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDL 231
Query: 248 --------------------------------DNVLYVKDIFINLEKKSLVSWNVMITVY 275
N + +F + +VSWN +I
Sbjct: 232 DISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICAT 291
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
K+ P A+ L++ M + P+ T SVL + L GR+IH + + +
Sbjct: 292 AKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGI 351
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNS 395
+L N+LID YA+CG LED++ FD ++ +++ W +L+S Y G L+LF +M
Sbjct: 352 VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQM 410
Query: 396 GISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDE 455
G P F L +C C+ +L +
Sbjct: 411 GFRPTEYTFSTALKSC------------------------------CVTEL-------QQ 433
Query: 456 AYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAK 515
+ VI +M E N+ V +L+ S M+ LL D P +++ IY++
Sbjct: 434 LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLD--WASGPTSVVPLNIVAGIYSR 491
Query: 516 AGRWKEVTEVRSLMKR 531
G++ E ++ S +++
Sbjct: 492 RGQYHESVKLISTLEQ 507
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 195/458 (42%), Gaps = 69/458 (15%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
A +VF+++ +++ +N M+ + + + + FRE+V G ++ VLK SC
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSM 203
+L QLH + K LD + V N LIS YGKCG A + + D+VSWN++
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGT------MASLMPAVTNTSSDNVLYVKD-- 255
+ A++ AL++ M + G P+ GT ++SL+ ++ + + +K+
Sbjct: 288 ICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGC 347
Query: 256 -------------------------IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ 290
F + K++V WN +++ Y P + L+LQ
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP-ICLSLFLQ 406
Query: 291 MEKSEVEPDAITCASVLPAC-----GDLSALL--LGRRIHEYVERKKLRP---NLLLENS 340
M + P T ++ L +C L +++ +G ++YV +R N L+ ++
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDA 466
Query: 341 LI------------------DMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
L+ +Y+R G ++ K+ ++ D SW I+A +
Sbjct: 467 LLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYH 526
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD-DYRITPRIEHFA 441
+ LF M S I PD FV+ILS CS L G +T D+ + F
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA---DTFV 583
Query: 442 C--LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
C L+D+ G+ G + V ++ E N W L+S
Sbjct: 584 CNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALIS 620
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 153/356 (42%), Gaps = 43/356 (12%)
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
++V N +IS+Y K G + A V D+MP R+ VS+N+++ GY++ D A V EM
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 226 LGQKPDAGTMASLMPAVT----------NTSSDNVLYVKDIFI----------------- 258
G P+ T++ L+ + S L++ D F+
Sbjct: 109 FGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMA 168
Query: 259 -----NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
++ KSL +WN M+++ + + ++ + + VL +
Sbjct: 169 EQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCV 228
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
L + +++H +K L + + NSLI Y +CG A+++F D+ SW ++I
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
A + AL LF M G SP+ +V++L S LL G+ + +
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 434 TPRIEHFACLVDLLGRAGRVDEA---YDVIKQMPLEPNERVWGTLLSSCRVYSNMD 486
T + A L+D + G ++++ +D I+ + N W LLS Y+N D
Sbjct: 349 TGIVLGNA-LIDFYAKCGNLEDSRLCFDYIR----DKNIVCWNALLSG---YANKD 396
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 33/229 (14%)
Query: 46 IIALKNVHTKLIYLNSHENPSLGIKLMRAYAAC--------------------------- 78
+ L+ +H+ ++ + +N + LMR+YA
Sbjct: 428 VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 79 -----GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYT 133
G+ + K+ + + + V +N+ I + + ++ + + +F+ M+ RPD YT
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDW-NLFVGNGLISMYGKCGCLLEARYVLDEM 192
+ +L CS +L G +HG + K + FV N LI MYGKCG + V +E
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
+++++W ++++ + +ALE +E LG KPD + S++ A
Sbjct: 608 REKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTA 656
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 309 ACGDL--------SALLLGRRIHEYVERKKLRP------NLLLE-----NSLIDMYARCG 349
+CGDL S L + R+ + K L ++LL+ N++I +Y + G
Sbjct: 4 SCGDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLG 63
Query: 350 CLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILS 409
+ A KVFD+M R+ S+ ++I Y G A +FSEM+ G P+ +LS
Sbjct: 64 EVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS 123
Query: 410 ACS---HSGLLEEGKV--YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP 464
S +G G Y M D + T CL+ L GR ++ A V + MP
Sbjct: 124 CASLDVRAGTQLHGLSLKYGLFMADAFVGT-------CLLCLYGRLDLLEMAEQVFEDMP 176
Query: 465 LEPNERVWGTLLS 477
+ E W ++S
Sbjct: 177 FKSLE-TWNHMMS 188
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 216/414 (52%), Gaps = 36/414 (8%)
Query: 165 NLFVGNGLISMYGKCGCLLEARY-VLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREM 223
N+ + + L+ Y K L V MP R++ SWN ++ ++++ ++++ M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 224 -DDLGQKPDAGTMASLMPAVTNT----SSD-----------------------------N 249
+ +PD T+ ++ A + + S D
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 250 VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA 309
+L+ + +F ++ + V + M Y++ + ++ +M S D++ S+L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
CG L AL G+ +H + R+ L L N++ DMY +C L+ A VF M RDV SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
+SLI YG+ G + LF EM GI P+ + F+ +LSAC+H GL+E+ +YF+ M
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-Q 363
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
+Y I P ++H+A + D + RAG ++EA ++ MP++P+E V G +LS C+VY N+++G
Sbjct: 364 EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNV 543
A L+QL P ++ YYV L+ +Y+ AGR+ E +R MK ++I K PG S++
Sbjct: 424 RVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 195/453 (43%), Gaps = 83/453 (18%)
Query: 62 HENPSLGIKLMRAYAACGE--PGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVF 119
+ N L KL+ AY+ P T+ VF + RN+ +N++I + + + + ++ +F
Sbjct: 63 YSNVVLSSKLVLAYSKLNHLFP-TSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 120 REMVNGG-FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGK 178
M RPD++T P +L+ACS S + G +H LK+ +LFV + L+ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 179 CGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASL 238
G LL AR + D+MP RD V + +M GY Q L + REM G D+ M SL
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 239 MPA---------------------------VTNTSSDNVL------YVKDIFINLEKKSL 265
+ A + N +D + Y +F+N+ ++ +
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301
Query: 266 VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC--GDL--SALLLGRR 321
+SW+ +I Y + + L+ +M K +EP+A+T VL AC G L + L R
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRL 361
Query: 322 IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQ 381
+ EY + P L S+ D +R G LE+A+K + M
Sbjct: 362 MQEY----NIVPELKHYASVADCMSRAGLLEEAEKFLEDMP------------------- 398
Query: 382 GCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR-IEHF 440
+ PD A+LS C G +E G+ +++ ++ PR ++
Sbjct: 399 ---------------VKPDEAVMGAVLSGCKVYGNVEVGERVARELI---QLKPRKASYY 440
Query: 441 ACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWG 473
L L AGR DEA + + M + +V G
Sbjct: 441 VTLAGLYSAAGRFDEAESLRQWMKEKQISKVPG 473
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 143/329 (43%), Gaps = 28/329 (8%)
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRW 111
+H + L + + L+ Y G+ ARK+FD++ R+ V Y M YV
Sbjct: 156 IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGE 215
Query: 112 YNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNG 171
L +FREM GF D+ +L AC L+ G +HG ++ L +GN
Sbjct: 216 AMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNA 275
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
+ MY KC L A V M RRDV+SW+S++ GY + + ++ EM G +P+
Sbjct: 276 ITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPN 335
Query: 232 AGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVM----ITVYMKN--------S 279
A T ++ A + L +KS + + +M I +K+ S
Sbjct: 336 AVTFLGVLSACAHG-------------GLVEKSWLYFRLMQEYNIVPELKHYASVADCMS 382
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI-HEYVERKKLRPNLLLE 338
G + +E V+PD +VL C + +G R+ E ++ K + + +
Sbjct: 383 RAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYV- 441
Query: 339 NSLIDMYARCGCLEDAQKVFDKMKFRDVA 367
+L +Y+ G ++A+ + MK + ++
Sbjct: 442 -TLAGLYSAAGRFDEAESLRQWMKEKQIS 469
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 239/517 (46%), Gaps = 66/517 (12%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIR 104
D+ L+ +H ++ N L ++ Y C AR+VFDEI + V +NV++R
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVR 236
Query: 105 SYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
Y+ + ++A+++F +M+ RP N+T V+ ACS S L G +H +K+ +
Sbjct: 237 RYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVA 296
Query: 165 NLFVGNGLISMYGKC-------------------------------GCLLEARYVLDEMP 193
+ V + MY KC G EAR + D MP
Sbjct: 297 DTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP 356
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS------ 247
R++VSWN+M+ GY +D+AL+ M + D T+ ++ + S
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQ 416
Query: 248 ----------DNVLYVKDIFINL------------------EKKSLVSWNVMITVYMKNS 279
D + V + +++ E + VSWN ++T +
Sbjct: 417 AHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVG 476
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLEN 339
A+ + M+ E +P T A++L C ++ AL LG+ IH ++ R + ++++
Sbjct: 477 RSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG 535
Query: 340 SLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISP 399
+++DMY++C C + A +VF + RD+ W S+I G+ LF ++N G+ P
Sbjct: 536 AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
DH+ F+ IL AC G +E G YF M+ Y I+P++EH+ C+++L + G + + +
Sbjct: 596 DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEF 655
Query: 460 IKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL 496
+ MP +P ++ + +C+ Y +G AA L+
Sbjct: 656 LLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 221/500 (44%), Gaps = 70/500 (14%)
Query: 46 IIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRS 105
++ + V + L+ + L + + AY CG AR++F+E+ ER+ +N +I +
Sbjct: 77 VVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITA 136
Query: 106 YVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWN 165
N ++ +FR M G R ++ VLK+C +LR QLH A++K N
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD 225
+ + ++ +YGKC + +AR V DE+ VSWN +V Y + D+A+ + +M +
Sbjct: 197 VDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLE 256
Query: 226 LGQKPDAGTMASLMPAVTNT------------------SSDNV-------LYVK------ 254
L +P T++S+M A + + +D V +YVK
Sbjct: 257 LNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLES 316
Query: 255 --DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDL------------------------- 287
+F K L SW ++ Y + + A +L
Sbjct: 317 ARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEW 376
Query: 288 -----YLQMEKSEVEP-DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
+L + + E+E D +T +L C +S + +G++ H ++ R N+++ N+L
Sbjct: 377 DEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL 436
Query: 342 IDMYARCGCLEDAQKVFDKM-KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPD 400
+DMY +CG L+ A F +M + RD SW +L++ G+ AL+ F MQ P
Sbjct: 437 LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPS 495
Query: 401 HIAFVAILSACSHSGLLEEGK-VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
+L+ C++ L GK ++ + D Y+I I +VD+ + D A +V
Sbjct: 496 KYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEV 553
Query: 460 IKQMPLEPNERVWGTLLSSC 479
K+ + +W +++ C
Sbjct: 554 FKEAATR-DLILWNSIIRGC 572
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 140/313 (44%), Gaps = 20/313 (6%)
Query: 254 KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
+++F + ++ SWN +IT +N + ++ +M + V + A VL +CG +
Sbjct: 116 RELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLI 175
Query: 314 SALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLI 373
L L R++H V + N+ LE S++D+Y +C + DA++VFD++ SW ++
Sbjct: 176 LDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
Y G A+ +F +M + P + +++ ACS S LE GKV + +
Sbjct: 236 RRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKV-IHAIAVKLSV 294
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAAD 493
+ D+ + R++ A V Q + + W + +S Y+ M A
Sbjct: 295 VADTVVSTSVFDMYVKCDRLESARRVFDQTR-SKDLKSWTSAMSG---YA-MSGLTREAR 349
Query: 494 NLLQLSPEQS--GYYVLLSNIYAKAGRWKEVTEVRSLMKRRR-----------IRKTPGI 540
L L PE++ + +L Y A W E + +LM++ + GI
Sbjct: 350 ELFDLMPERNIVSWNAMLGG-YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 541 SNVELNSQVHTFL 553
S+V++ Q H F+
Sbjct: 409 SDVQMGKQAHGFI 421
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 8/171 (4%)
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
+C + ++ R++ ++ P + L N I+ Y +CGC++DA+++F++M RD S
Sbjct: 70 SCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGS 129
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM- 427
W ++I+A G +F M G+ +F +L +C GL+ + ++ +Q+
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRL-LRQLH 185
Query: 428 --TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
Y + ++ +VD+ G+ + +A V ++ + P++ W ++
Sbjct: 186 CAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEI-VNPSDVSWNVIV 235
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 172/308 (55%), Gaps = 16/308 (5%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGN-----AIDLYLQME--KSEVEPDAITCA 304
Y + +F + +++ V+WN MI Y + GN A+ L+ + S V P T
Sbjct: 165 YARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMV 224
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRP--NLLLENSLIDMYARCGCLEDAQKVFDKMK 362
VL A L +G +H Y+E+ P ++ + +L+DMY++CGCL +A VF+ MK
Sbjct: 225 CVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMK 284
Query: 363 FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKV 422
++V +WTS+ + + G+G L + M SGI P+ I F ++LSA H GL+EEG
Sbjct: 285 VKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIE 344
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
FK M + +TP IEH+ C+VDLLG+AGR+ EAY I MP++P+ + +L ++C +Y
Sbjct: 345 LFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIY 404
Query: 483 SNMDIGLLAADNLLQLSPEQ---SGY----YVLLSNIYAKAGRWKEVTEVRSLMKRRRIR 535
+G LL++ E SG YV LSN+ A G+W EV ++R MK RRI+
Sbjct: 405 GETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIK 464
Query: 536 KTPGISNV 543
PG S V
Sbjct: 465 TRPGYSFV 472
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 15/273 (5%)
Query: 62 HENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVN-----NRWYNDAL 116
+E+ +G L+ YA G+ ARKVFDE+ ER V +N MI Y + N A+
Sbjct: 144 YESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAM 203
Query: 117 LVFREM--VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRL--DWNLFVGNGL 172
++FR G RP + T CVL A S + L G +HG + K+ + ++F+G L
Sbjct: 204 VLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTAL 263
Query: 173 ISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDA 232
+ MY KCGCL A V + M ++V +W SM G A N R ++ + M + G KP+
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNE 323
Query: 233 GTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVS-WNVMITVYMKNSMPGNAIDLYL 289
T SL+ A + + + K + ++ + ++ + K A L
Sbjct: 324 ITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFIL 383
Query: 290 QMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
M ++PDAI S+ AC ++G I
Sbjct: 384 AM---PIKPDAILLRSLCNACSIYGETVMGEEI 413
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 187/453 (41%), Gaps = 50/453 (11%)
Query: 46 IIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARK-------VFDEISERNVVF 98
+I K +H +L+ H+N G KL+ Y C +P T VF +
Sbjct: 21 LIQAKQIHAQLVINGCHDNSLFG-KLIGHY--CSKPSTESSSKLAHLLVFPRFGHPDKFL 77
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGG--FRPDNYTYPCVL---KACSCSDNLRFGLQL 153
+N +++ D++ +F + + T+ VL + S LR G +
Sbjct: 78 FNTLLKCSKP----EDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIV 133
Query: 154 HGAMLKVRLDW-NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQ--- 209
HG + K+ + + +G L+ Y K G L AR V DEMP R V+WN+M+ GY
Sbjct: 134 HGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKD 193
Query: 210 --NMRFDDALEVCREMDDLGQ--KPDAGTMASLMPAVTNTSSDNV-----LYVKDIFINL 260
N A+ + R G +P TM ++ A++ T + Y++ +
Sbjct: 194 KGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTP 253
Query: 261 EKKSLVSWNVMITVYMKNSMPGNAIDLYLQME-KSEVEPDAITCASVLPACGDLSALLLG 319
E + ++ +Y K NA ++ M+ K+ ++ L G+ + LL
Sbjct: 254 EVDVFIG-TALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLN 312
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYG-- 377
R + ++PN + SL+ Y G +E+ ++F MK R T +I YG
Sbjct: 313 R-----MAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTR--FGVTPVIEHYGCI 365
Query: 378 --MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG---LLEE-GKVYFKQMTDDY 431
+ G+ + + I PD I ++ +ACS G + EE GK + +D
Sbjct: 366 VDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDE 425
Query: 432 RIT-PRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+++ E + L ++L G+ E + K+M
Sbjct: 426 KLSGSECEDYVALSNVLAHKGKWVEVEKLRKEM 458
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 15/229 (6%)
Query: 316 LLLGRRIHEYVERKK-LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLIS 374
L +GR +H V++ L + L+ +L+ YA+ G L A+KVFD+M R +W ++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 375 AYGMTGQGCN-----ALALFSEMQ--NSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
Y N A+ LF SG+ P V +LSA S +GLLE G + +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 428 TDDYRITPRIEHF--ACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRV--YS 483
+ TP ++ F LVD+ + G ++ A+ V + M ++ N W ++ + +
Sbjct: 247 -EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNGRG 304
Query: 484 NMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRR 532
N LL + P + + LLS Y G +E E+ MK R
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLS-AYRHIGLVEEGIELFKSMKTR 352
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 204/379 (53%), Gaps = 45/379 (11%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
++ +A + ARK FD + E++VV +N M+ Y N + DAL +F +M+ G RP+
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
T+ V+ ACS + L + + R+ N FV L+ M+ KC + AR + +
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 191 EM-PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDN 249
E+ +R++V+WN+M++GY + G M+S
Sbjct: 324 ELGTQRNLVTWNAMISGYTR----------------------IGDMSS------------ 349
Query: 250 VLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQM-EKSEVEPDAITCASVLP 308
+ +F + K+++VSWN +I Y N AI+ + M + + +PD +T SVL
Sbjct: 350 ---ARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLS 406
Query: 309 ACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS 368
ACG ++ L LG I +Y+ + +++ N SLI MYAR G L +A++VFD+MK RDV S
Sbjct: 407 ACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVS 466
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
+ +L +A+ G G L L S+M++ GI PD + + ++L+AC+ +GLL+EG+ FK +
Sbjct: 467 YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Query: 429 DDYRITPRIEHFACLVDLL 447
+ P +H+AC+ DLL
Sbjct: 527 N-----PLADHYACM-DLL 539
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 203/452 (44%), Gaps = 51/452 (11%)
Query: 49 LKNVHTKLIYLNSHENPSLGIKLMRAYAACGE---PGT-ARKVFDEISERNVVFYNVMIR 104
L +H +LI NS P R + C P R +FD ++ NV N M +
Sbjct: 22 LNQIHAQLIVFNSL--PRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFK 79
Query: 105 SYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW 164
+ ND L ++ + G PD +++P V+K+ RFG+ + K+
Sbjct: 80 YFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG-----RFGILFQALVEKLGFFK 134
Query: 165 NLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMD 224
+ +V N ++ MY K + AR V D++ +R WN M++GY ++ + E C+ D
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGY---WKWGNKEEACKLFD 191
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNA 284
+ P+ ++ + ++ + F + +KS+VSWN M++ Y +N +A
Sbjct: 192 MM---PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDM 344
+ L+ M + V P+ T V+ AC + L R + + ++ K++R N ++ +L+DM
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 345 YARC--------------------------------GCLEDAQKVFDKMKFRDVASWTSL 372
+A+C G + A+++FD M R+V SW SL
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 373 ISAYGMTGQGCNALALFSEMQNSGIS-PDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
I+ Y GQ A+ F +M + G S PD + +++LSAC H LE G + +
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN- 427
Query: 432 RITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+I + L+ + R G + EA V +M
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 252 YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
Y + IF ++ ++ N M + K M + + LY Q + + PDA + V+ + G
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTS 371
L VE+ + + N ++DMY + +E A+KVFD++ R + W
Sbjct: 118 RFGILF-----QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
+IS Y G A LF M + D +++ +++ + LE + YF +M +
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 432 RITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSC 479
++ + ++ + G ++A + M + PNE W ++S+C
Sbjct: 229 VVS-----WNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 205 bits (521), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 150/534 (28%), Positives = 255/534 (47%), Gaps = 45/534 (8%)
Query: 51 NVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNR 110
VH ++I L N + L+ YA A K+FDE+ +RN+ N+++R +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 111 WYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRF-GLQLHGAMLKVRLDWNL--- 166
V+ M G + TY +++ CS D L + G QLH L V+ WN+
Sbjct: 193 ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCS-HDRLVYEGKQLHS--LVVKSGWNISNI 249
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDL 226
FV N L+ Y CG L + + +P +DV+SWNS+V+ A D+L++ +M
Sbjct: 250 FVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFW 309
Query: 227 GQKPDAGTMASLMPAVTNTSSD-----------------NVLYVKDIFINLEKK------ 263
G++P S + + S + L+V+ I++ K
Sbjct: 310 GKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIEN 369
Query: 264 -----------SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+L N ++T M + + I+++ M D +T ++VL A
Sbjct: 370 SALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL-S 428
Query: 313 LS---ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
LS +L +H + ++ + SLID Y + G E ++KVFD++ ++
Sbjct: 429 LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCL 488
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
TS+I+ Y G G + + + EM + PD + +++LS CSHSGL+EEG++ F +
Sbjct: 489 TSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLES 548
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
Y I+P + +AC+VDLLGRAG V++A ++ Q + + W +LL SCR++ N IG
Sbjct: 549 KYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGR 608
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNV 543
AA+ L+ L PE Y+ +S Y + G ++ ++R + R + + G S+V
Sbjct: 609 RAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 45/376 (11%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYND--ALLVFREMVNGGFRPDNYTYPC 136
G +A + FDE+S R+VV YN++I N+R+ A+ ++ EMV+ G R T+P
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISG--NSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 137 VLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD 196
VL CS R G+Q+H ++ + N+FV + L+ +Y + A + DEM R+
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 197 VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLY---- 252
+ N ++ + Q EV M+ G + T + + S D ++Y
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYM---IRGCSHDRLVYEGKQ 234
Query: 253 -----------VKDIFI----------------------NLEKKSLVSWNVMITVYMKNS 279
+ +IF+ + +K ++SWN +++V
Sbjct: 235 LHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYG 294
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR-PNLLLE 338
+++DL+ +M+ P S L C S + G++IH YV + +L ++
Sbjct: 295 SVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Query: 339 NSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGIS 398
++LIDMY +C +E++ ++ + ++ SL+++ G + + +F M + G
Sbjct: 355 SALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTG 414
Query: 399 PDHIAFVAILSACSHS 414
D + +L A S S
Sbjct: 415 IDEVTLSTVLKALSLS 430
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 1/239 (0%)
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
S N+L + F + + +V++N++I+ + AI+LY +M + A T SV
Sbjct: 59 SGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSV 118
Query: 307 LPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
L C D G ++H V N+ + ++L+ +YA ++ A K+FD+M R++
Sbjct: 119 LSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 367 ASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQ 426
A L+ + TG+ ++ M+ G++ + + + ++ CSH L+ EGK
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 427 MTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNM 485
+ I LVD G + + +P E + W +++S C Y ++
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYGSV 296
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 15/289 (5%)
Query: 45 DIIALKNVHTKLIYLNSHENPSLGIK--LMRAYAACGEPGTARKVFDEISERNVVFYNVM 102
DI + K +H ++ + + SL ++ L+ Y C + ++ + N+ N +
Sbjct: 330 DIQSGKQIHCYVLKMG-FDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSL 388
Query: 103 IRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS--DNLRFGLQLHGAMLKV 160
+ S ++ D + +F M++ G D T VLKA S S ++L +H +K
Sbjct: 389 MTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKS 448
Query: 161 RLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVC 220
++ V LI Y K G +R V DE+ ++ S++ GYA+N D +++
Sbjct: 449 GYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKML 508
Query: 221 REMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVS-----WNVMITVY 275
REMD + PD T+ S++ ++ S V + IF +LE K +S + M+ +
Sbjct: 509 REMDRMNLIPDEVTILSVLSGCSH--SGLVEEGELIFDSLESKYGISPGRKLYACMVDLL 566
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE 324
+ + A L LQ + D + +S+L +C +GRR E
Sbjct: 567 GRAGLVEKAERLLLQARG---DADCVAWSSLLQSCRIHRNETIGRRAAE 612
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/514 (27%), Positives = 243/514 (47%), Gaps = 45/514 (8%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVL 138
G A +FDE+ ER+VV +N MI V+ ++ + VF +M RP +T+ +
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 139 KACSCSDNLRFGLQLHG-AMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV 197
+C +R G Q+HG A+ +NL V N ++ MY + G A V M RDV
Sbjct: 144 SLVTC---VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 198 VSWNSMVAGYAQNMRFDDALE----------------------VCREMDDLGQKPDAGTM 235
VSWN ++ + + + AL+ +C ++ +L + A +
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALAL 260
Query: 236 ASLMPAVTNT----------SSDNVL--YVKDIFINLEKKSLVSWNVMITVYMKNSMPGN 283
M ++N+ S N L VK +F LEK V N MI Y + +
Sbjct: 261 CIKMGFLSNSIVLGAGIDMFSKCNRLDDSVK-LFRELEKWDSVLCNSMIGSYSWHCCGED 319
Query: 284 AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL--GRRIHEYVERKKLRPNLLLENSL 341
A+ L++ V PD T +SVL + ++A++L G +H V + + + SL
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSS---MNAVMLDHGADVHSLVIKLGFDLDTAVATSL 376
Query: 342 IDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE-MQNSGISPD 400
++MY + G ++ A VF K +D+ W ++I + +LA+F++ + N + PD
Sbjct: 377 MEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPD 436
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVI 460
+ + IL AC ++G + EG F M + + P EH+AC+++LL R G ++EA D+
Sbjct: 437 RVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIA 496
Query: 461 KQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWK 520
++P EP+ +W +L + + + A +L+ P+ S Y++L IY RW+
Sbjct: 497 DKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWE 556
Query: 521 EVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLA 554
++R M +++ G S + + S V +F A
Sbjct: 557 NSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 37/328 (11%)
Query: 115 ALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML-KVRLDWNLFVGNGLI 173
A +V +++ GF Y L+ S ++ LQL + K + WN+ + GL
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCL-KGLF 81
Query: 174 SMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAG 233
K G L A + DEMP RDVVSWN+M++G + + V +M +P
Sbjct: 82 ----KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEF 137
Query: 234 TMASLMPAVT---------------NTSSDNVL----------------YVKDIFINLEK 262
T + L VT S N++ Y +F+ +E
Sbjct: 138 TFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMED 197
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
+ +VSWN +I + A+D + M + E++PD T + V+ C DL L G++
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
+ N ++ + IDM+++C L+D+ K+F +++ D S+I +Y G
Sbjct: 258 LALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCG 317
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSA 410
+AL LF + PD F ++LS+
Sbjct: 318 EDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMR 212
+H +L+ + GN + +Y K G ++ A + D++P ++ ++WN + G +N
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 213 FDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMI 272
++AL D+F + ++ +VSWN MI
Sbjct: 86 LNNAL-------------------------------------DLFDEMPERDVVSWNTMI 108
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH-EYVERKKL 331
+ + I ++ M++ E+ P T S+L + ++ + G +IH +
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFT-FSILASL--VTCVRHGEQIHGNAICSGVS 165
Query: 332 RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSE 391
R NL++ NS++DMY R G + A VF M+ RDV SW LI + +G AL F
Sbjct: 166 RYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWL 225
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M+ I PD ++S CS L +GK ++ I +D+ +
Sbjct: 226 MREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV-LGAGIDMFSKCN 284
Query: 452 RVDEAYDVIKQM 463
R+D++ + +++
Sbjct: 285 RLDDSVKLFREL 296
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 137/328 (41%), Gaps = 34/328 (10%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
+M Y G A VF + +R+VV +N +I S ++ AL F M +PD
Sbjct: 175 VMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
YT V+ CS L G Q +K+ N V I M+ KC L ++ +
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDN- 249
E+ + D V NSM+ Y+ + +DAL + +PD T +S++ ++ D+
Sbjct: 295 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHG 354
Query: 250 -----------------------VLYVKD--------IFINLEKKSLVSWNVMITVYMKN 278
+Y K +F + K L+ WN +I +N
Sbjct: 355 ADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARN 414
Query: 279 SMPGNAIDLYLQMEKSE-VEPDAITCASVLPACGDLSALLLGRRIHEYVERKK-LRPNLL 336
S ++ ++ Q+ ++ ++PD +T +L AC + G +I +E+ + P
Sbjct: 415 SRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNE 474
Query: 337 LENSLIDMYARCGCLEDAQKVFDKMKFR 364
+I++ R G + +A+ + DK+ F
Sbjct: 475 HYACIIELLCRVGMINEAKDIADKIPFE 502
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 208/410 (50%), Gaps = 20/410 (4%)
Query: 266 VSWNVMITVYMKNSMPGN---AIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
V+ NV I + + GN A+++ +E D I + CG AL R +
Sbjct: 82 VAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVV 141
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQG 382
HE + ++ N++I+MY+ C ++DA KVF++M + + ++ + G G
Sbjct: 142 HECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYG 201
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
A+ LF+ + G P+ F + S C+ +G ++EG + F+ M +Y I P +EH+
Sbjct: 202 EEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHS 261
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQ 502
+ +L +G +DEA + +++MP+EP+ VW TL++ RV+ ++++G A+ + +L +
Sbjct: 262 VTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATR 321
Query: 503 SGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQS 562
+ KA + + K R P + TF D+SHPQ
Sbjct: 322 LDKVSSAGLVATKASDF--------VKKEPSTRSEPYFYS--------TFRPVDSSHPQM 365
Query: 563 KEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTH-ESP 621
IYE L L ++KE+GYVP+T + + + + + E++A+V +LL + S
Sbjct: 366 NIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSA 425
Query: 622 IRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
I + N+R+ GDCH KL+S I GR+++ RD +H FK+G+C C + W
Sbjct: 426 ITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 184/374 (49%), Gaps = 33/374 (8%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPD 130
L+ YA CGE +A + FD + E++V+ + +I + A+ +F M+N F P+
Sbjct: 224 LVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPN 283
Query: 131 NYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLD 190
+T +LKACS LRFG Q+H ++K + ++FVG L+ MY KCG + + R V D
Sbjct: 284 EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFD 343
Query: 191 EMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA--------- 241
M R+ V+W S++A +A+ ++A+ + R M + T+ S++ A
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 242 --------VTNTSSDNV--------LYVK--------DIFINLEKKSLVSWNVMITVYMK 277
+ N+ NV LY K ++ L + +VSW MI+
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLL 337
A+D +M + VEP+ T +S L AC + +LL+GR IH ++ N+ +
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 338 ENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGI 397
++LI MYA+CG + +A +VFD M +++ SW ++I Y G AL L M+ G
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGF 583
Query: 398 SPDHIAFVAILSAC 411
D F ILS C
Sbjct: 584 EVDDYIFATILSTC 597
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 222/491 (45%), Gaps = 37/491 (7%)
Query: 20 QKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACG 79
Q +SF S + LL + L + +K +H + + G L+ + G
Sbjct: 72 QDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLG 131
Query: 80 EPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDN-YTYPCVL 138
+ ARKVFD + E+N V + MI Y+ ++A +F + V G R N + C+L
Sbjct: 132 DLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLL 191
Query: 139 KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV 198
CS G Q+HG M+KV + NL V + L+ Y +CG L A D M +DV+
Sbjct: 192 NLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVI 250
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS------DNVLY 252
SW ++++ ++ A+ + M + P+ T+ S++ A + + + L
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLV 310
Query: 253 VK-----DIFIN----------------------LEKKSLVSWNVMITVYMKNSMPGNAI 285
VK D+F+ + ++ V+W +I + + AI
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 286 DLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMY 345
L+ M++ + + +T S+L ACG + ALLLG+ +H + + + N+ + ++L+ +Y
Sbjct: 371 SLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLY 430
Query: 346 ARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
+CG DA V ++ RDV SWT++IS G AL EM G+ P+ +
Sbjct: 431 CKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYS 490
Query: 406 AILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPL 465
+ L AC++S L G+ ++ ++ A L+ + + G V EA+ V MP
Sbjct: 491 SALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFDSMP- 548
Query: 466 EPNERVWGTLL 476
E N W ++
Sbjct: 549 EKNLVSWKAMI 559
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 186/389 (47%), Gaps = 35/389 (8%)
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
+ F + Y + + S+ +R ++H LK D ++ GN LIS + G L+
Sbjct: 75 SSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLV 134
Query: 184 EARYVLDEMPRRDVVSWNSMVAGY-----------------AQNMRF-DDALEVC----- 220
AR V D MP ++ V+W +M+ GY +RF ++ + VC
Sbjct: 135 YARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLC 194
Query: 221 --REMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVK--------DIFINLEKKSLVSWNV 270
R +LG++ + + + SS Y + F +E+K ++SW
Sbjct: 195 SRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTA 254
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+I+ + AI +++ M P+ T S+L AC + AL GR++H V ++
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMTGQGCNALALFS 390
++ ++ + SL+DMYA+CG + D +KVFD M R+ +WTS+I+A+ G G A++LF
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 391 EMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRA 450
M+ + +++ V+IL AC G L GK Q+ + I + + LV L +
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKC 433
Query: 451 GRVDEAYDVIKQMPLEPNERVWGTLLSSC 479
G +A++V++Q+P + W ++S C
Sbjct: 434 GESRDAFNVLQQLP-SRDVVSWTAMISGC 461
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 33/297 (11%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
+ VH+ ++ + +G LM YA CGE RKVFD +S RN V + +I ++
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
+ +A+ +FR M +N T +L+AC L G +LH ++K ++ N+++G
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ L+ +Y KCG +A VL ++P RDVVSW +M++G + +AL+ +EM G +
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 230 PDAGTMASLMPAVTNTSS-----------------DNV--------LYVK--------DI 256
P+ T +S + A N+ S NV +Y K +
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRV 543
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL 313
F ++ +K+LVSW MI Y +N A+ L +ME E D A++L CGD+
Sbjct: 544 FDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 107/202 (52%)
Query: 50 KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNN 109
K +H ++I + +N +G L+ Y CGE A V ++ R+VV + MI +
Sbjct: 405 KELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSL 464
Query: 110 RWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVG 169
++AL +EM+ G P+ +TY LKAC+ S++L G +H K N+FVG
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQK 229
+ LI MY KCG + EA V D MP +++VSW +M+ GYA+N +AL++ M+ G +
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFE 584
Query: 230 PDAGTMASLMPAVTNTSSDNVL 251
D A+++ + D +
Sbjct: 585 VDDYIFATILSTCGDIELDEAV 606
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 38 KALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISERNVV 97
KA ++ +++H+ ++ N +G L+ YA CG A +VFD + E+N+V
Sbjct: 494 KACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLV 553
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKAC 141
+ MI Y N + +AL + M GF D+Y + +L C
Sbjct: 554 SWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/363 (31%), Positives = 192/363 (52%), Gaps = 16/363 (4%)
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
CG++ AL R +H+ + R +++I+MY+ C +DA VF++M R+ +W
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
++I G+G A+ +F+ G PD F A+ AC G + EG ++F+ M
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 430 DYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
DY + +E + ++++L G +DEA D +++M +EP+ +W TL++ C V +++G
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGD 297
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQV 549
A+ + +L + + AKA + +++ L + IR P ++
Sbjct: 298 RFAELIKKLDASRMSKESNAGLVAAKASD-SAMEKLKELRYCQMIRDDP-------KKRM 349
Query: 550 HTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLA 609
H F AGDTSH + + L V +M ++G+VP T VEEE+KE L S KLA
Sbjct: 350 HEFRAGDTSHLGTVSAFRSLKV---QMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLA 406
Query: 610 IVFALLNTH-ESPIRITKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
A++N+ P+ + +N+R C D H K+IS I GR ++ RD ++H +K+G+CSC
Sbjct: 407 FAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCK 466
Query: 669 DYW 671
DYW
Sbjct: 467 DYW 469
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 566 YEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE-SPIRI 624
Y +L L ++++ GYVPET LHD++EE KE L HSE+LAI F ++NT + IR+
Sbjct: 133 YVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRV 192
Query: 625 TKNLRVCGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCGDYW 671
KNLR+CGDCH K++S I REI++RD RFHHF+DG CSCGDYW
Sbjct: 193 MKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 188/400 (47%), Gaps = 30/400 (7%)
Query: 79 GEPGTARKVFDEIS----ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
GEP A + +++ E +VV Y+ +I S R +DAL +F EM N G RPD +TY
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 135 PCVLKACSC-----SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
++ +C C SD R L ML+ +++ N+ N LI + K G L+EA +
Sbjct: 279 SSLI-SCLCNYGRWSDASR----LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 190 DEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
DEM +R ++V++NS++ G+ + R D+A ++ M PD T +L+
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCK- 392
Query: 246 SSDNVLYVKDIFINLEKKSL----VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAI 301
+ V+ ++F ++ ++ L V++ +I + + S NA ++ QM V P+ +
Sbjct: 393 -AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
T ++L L + EY+++ K+ P++ N + + + G +ED +F +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 362 KFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLL 417
+ DV ++ ++IS + G A LF +M+ G PD + ++ A G
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Query: 418 EEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAY 457
K+M R + + D+L GR+D+ +
Sbjct: 572 AASAELIKEMR-SCRFAGDASTYGLVTDML-HDGRLDKGF 609
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 225/501 (44%), Gaps = 39/501 (7%)
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G + YTY ++ L F L + G M+K+ ++ N L++ + + EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 186 RYVLDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
++D+M + D V++ ++V G Q+ + +A+ + M G +PD T +++
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 242 VTNTSSDNVLYVKDIFINLEKK--------SLVSWNVMITVYMKNSMPGNAIDLYLQMEK 293
+ D+ +NL K +V ++ +I K +A++L+ +M+
Sbjct: 215 LCKRGE------PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLED 353
+ PD T +S++ + R+ + +K+ PN++ NSLID +A+ G L +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 354 AQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILS 409
A+K+FD+M R ++ ++ SLI+ + M + A +F+ M + PD + + +++
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 410 ACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLE 466
+ + +G F+ M+ + + + L+ +A D A V KQM +
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVT-YTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 467 PNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGY-YVLLSNIYAKAGRWKEVTEV 525
PN + TLL ++ ++ + L + E Y Y ++S KAG+ ++ ++
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 526 RSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPET 585
+ + ++ P + + N+ + F K + EE Y L KMKE G +P++
Sbjct: 508 FCSLSLKGVK--PDV--IAYNTMISGFC--------KKGLKEEAYTLFIKMKEDGPLPDS 555
Query: 586 DSALHDVEEEDKEGHLAVHSE 606
+ + ++G A +E
Sbjct: 556 GTYNTLIRAHLRDGDKAASAE 576
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 187/396 (47%), Gaps = 14/396 (3%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
++V N ++ + + ++A+ + +MV G++PD T+ ++ + + L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR----RDVVSWNSMVAGYAQN 210
M+ +L +I+ K G A +L++M + DVV +++++ +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVSW 268
DDAL + EMD+ G +PD T +SL+ + N SD + D+ ++V++
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N +I + K A L+ +M + ++P+ +T S++ L ++I +
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCN 384
K P+++ N+LI+ + + + D ++F M R + ++T+LI + N
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
A +F +M + G+ P+ + + +L +G LE+ V F+ + ++ P I + +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMS 492
Query: 445 DLLGRAGRVDEAYDVIKQMPL---EPNERVWGTLLS 477
+ + +AG+V++ +D+ + L +P+ + T++S
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 116/251 (46%), Gaps = 14/251 (5%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ A+A G+ A K+FDE+ +R N+V YN +I + + ++A +F MV+
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
PD TY ++ + + G++L M + L N LI + + A+
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 187 YVLDEM----PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
V +M +++++N+++ G +N + + A+ V + +PD T + +
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 243 TNTSSDNVLYVKDIFINLE----KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP 298
+ D+F +L K ++++N MI+ + K + A L+++M++ P
Sbjct: 496 CKAGKVEDGW--DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 299 DAITCASVLPA 309
D+ T +++ A
Sbjct: 554 DSGTYNTLIRA 564
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 188/426 (44%), Gaps = 48/426 (11%)
Query: 79 GEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
G +A +F+ + E +V Y +I ++ N+ Y +A+ VF++M G +P TY
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 135 PCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR 194
+L FG K+ WN K L+E P
Sbjct: 247 NVILNV--------FG--------KMGTPWN------------KITSLVEKMKSDGIAP- 277
Query: 195 RDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV--TNTSSDNVLY 252
D ++N+++ + +A +V EM G D T +L+ ++ + +
Sbjct: 278 -DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 253 VKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGD 312
+ ++ +N S+V++N +I+ Y ++ M A++L QM + +PD T ++L
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Query: 313 LSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF----RDVAS 368
+ I E + +PN+ N+ I MY G + K+FD++ D+ +
Sbjct: 397 AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVT 456
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT 428
W +L++ +G G +F EM+ +G P+ F ++SA S G E+ +++M
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 429 DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVWGTLLSSCRVYSN- 484
D +TP + + ++ L R G +++ V+ +M +PNE + +LL Y+N
Sbjct: 517 DA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL---HAYANG 572
Query: 485 MDIGLL 490
+IGL+
Sbjct: 573 KEIGLM 578
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 190/441 (43%), Gaps = 23/441 (5%)
Query: 71 LMRAYAACGEPGTARKVFDEIS----ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ Y P A KV +E+ ++V YN +I +Y + ++A+ + +M G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
+PD +TY +L + + + + M N+ N I MYG G E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 187 YVLDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
+ DE+ D+V+WN+++A + QN + V +EM G P+ T +L+ A
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 243 TNTSS-DNVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
+ S + + V ++ L ++N ++ + M + + +ME +P+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
+T S+L A + + L + E V + P +L +L+ + ++C L +A++ F +
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 361 MKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
+K R D+ + S++S YG A + M+ G +P + +++ S S
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 417 LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLL 476
+ + +++ I P I + ++ R R+ +A + +M R G +
Sbjct: 680 FGKSEEILREILAK-GIKPDIISYNTVIYAYCRNTRMRDASRIFSEM------RNSGIVP 732
Query: 477 SSCRVYSNMDIGLLAADNLLQ 497
+ N IG AAD++ +
Sbjct: 733 DV--ITYNTFIGSYAADSMFE 751
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 192/462 (41%), Gaps = 60/462 (12%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSY--VNNRWYNDALLVFREMVN 124
L+ A+A G A VF ++ E ++ YNV++ + + W N + +M +
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW-NKITSLVEKMKS 272
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLE 184
G PD YTY ++ C + Q+ M ++ N L+ +YGK E
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 185 ARYVLDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
A VL+EM +V++NS+++ YA++ D+A+E+ +M + G KPD T +L+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 241 AVTNTSSDNVLYVKDIFINLE----KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
+ V IF + K ++ ++N I +Y + ++ ++ +
Sbjct: 393 GFER--AGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 297 EPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQK 356
PD +T ++L G + + ++R P N+LI Y+RCG E A
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 357 VFDKM----KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA-- 410
V+ +M D++++ ++++A G + + +EM++ P+ + + ++L A
Sbjct: 511 VYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Query: 411 ---------------------------------CSHSGLLEEGKVYFKQMTDDYRITPRI 437
CS LL E + F ++ + +P I
Sbjct: 571 NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFSPDI 629
Query: 438 EHFACLVDLLGRAGRVDEA---YDVIKQMPLEPNERVWGTLL 476
+V + GR V +A D +K+ P+ + +L+
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 14/307 (4%)
Query: 71 LMRAYAACGEPGTA----RKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ AY+ CG A R++ D ++ YN ++ + + + V EM +G
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
+P+ TY +L A + + L + ++ + L+ + KC L EA
Sbjct: 555 CKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 187 YVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
E+ R D+ + NSMV+ Y + A V M + G P T SLM
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 243 TNTS----SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP 298
+ ++ S+ +L ++I K ++S+N +I Y +N+ +A ++ +M S + P
Sbjct: 675 SRSADFGKSEEIL--REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 732
Query: 299 DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVF 358
D IT + + + S + Y+ + RPN NS++D Y + ++A+
Sbjct: 733 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 792
Query: 359 DKMKFRD 365
+ ++ D
Sbjct: 793 EDLRNLD 799
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 24/172 (13%)
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
+IS G G+ +A +F+ +Q G S D ++ +++SA ++SG E FK+M +D
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED- 237
Query: 432 RITPRIEHFACLVDLLGRAG----RVDEAYDVIKQMPLEPNERVWGTLLSSCR------- 480
P + + ++++ G+ G ++ + +K + P+ + TL++ C+
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 481 ---VYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLM 529
V+ M + D + Y L ++Y K+ R KE +V + M
Sbjct: 298 AAQVFEEMKAAGFSYDKVT---------YNALLDVYGKSHRPKEAMKVLNEM 340
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 186/384 (48%), Gaps = 27/384 (7%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
+V YNV++R+ + + ++ A +F EM PD YTY ++ + L
Sbjct: 154 SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQN 210
M + R+ +L + + LI + + +A + + R D+V++NSM+ Y +
Sbjct: 214 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKA 273
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKS------ 264
F +A + +EM++ G P+ + ++L+ +N +++ + + E K
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV----ENHKFLEALSVFAEMKEVNCALD 329
Query: 265 LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE 324
L + N+MI VY + M A L+ + K ++EP+ ++ ++L G+ A L G IH
Sbjct: 330 LTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE--AELFGEAIHL 387
Query: 325 Y--VERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA----SWTSLISAYGM 378
+ ++RK + N++ N++I +Y + E A + +M+ R + +++++IS +G
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
G+ A LF ++++SG+ D + + ++ A GL+ K ++ I PR
Sbjct: 448 AGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNI-PR-- 504
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQ 462
+ +L +AGR +EA V +Q
Sbjct: 505 --ETAITILAKAGRTEEATWVFRQ 526
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 157/388 (40%), Gaps = 72/388 (18%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
++V YN MI Y + + +A L+ +EM G P+ +Y +L + L +
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVF 318
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD----VVSWNSMVAGYAQN 210
M +V +L N +I +YG+ + EA + + + D VVS+N+++ Y +
Sbjct: 319 AEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEA 378
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNV 270
F +A+ + R M KDI ++++V++N
Sbjct: 379 ELFGEAIHLFRLMQR----------------------------KDI-----EQNVVTYNT 405
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
MI +Y K A +L +M+ +EP+AIT ++++ G L + + +
Sbjct: 406 MIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSG 465
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF--------------------------- 363
+ + +L ++I Y R G + A+++ ++K
Sbjct: 466 VEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFR 525
Query: 364 --------RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
+D++ + +I+ Y + N + +F +M+ +G PD +L+A
Sbjct: 526 QAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQR 585
Query: 416 LLEEGKVYFKQMTDDYRITPRIEHFACL 443
E+ +++M ++ + P HF L
Sbjct: 586 EFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 128/290 (44%), Gaps = 10/290 (3%)
Query: 197 VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-DNVL-YVK 254
V ++N ++ + +FD A + EM PD T ++L+ + D+ L +++
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 255 DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLS 314
+ + LV ++ +I + + AI ++ ++++S + PD + S++ G
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 315 ALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWT 370
R + + + + PN + ++L+ +Y +A VF +MK D+ +
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCN 334
Query: 371 SLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
+I YG A LF ++ I P+ +++ IL + L E F+ M
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394
Query: 431 YRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVWGTLLS 477
I + + ++ + G+ ++A +++++M +EPN + T++S
Sbjct: 395 -DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 116/262 (44%), Gaps = 13/262 (4%)
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
+++ +IT + K M +A+ +ME+ V D + ++++ L I +
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRL 251
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISAYGMTGQG 382
+R + P+L+ NS+I++Y + +A+ + +M + S+++L+S Y +
Sbjct: 252 KRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKF 311
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
AL++F+EM+ + D ++ +++E F + I P + +
Sbjct: 312 LEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR-KMDIEPNVVSYNT 370
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ----- 497
++ + G A EA + + M + E+ T + ++Y + A NL+Q
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT-MEHEKATNLVQEMQSR 429
Query: 498 -LSPEQSGYYVLLSNIYAKAGR 518
+ P Y ++S I+ KAG+
Sbjct: 430 GIEPNAITYSTIIS-IWGKAGK 450
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 98/245 (40%), Gaps = 37/245 (15%)
Query: 71 LMRAYAACGEPGTARKVFDEIS----ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
++R Y G A +F + E+NVV YN MI+ Y + A + +EM + G
Sbjct: 371 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 430
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
P+ TY ++ + L L + ++ + + +I Y + G + A+
Sbjct: 431 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 490
Query: 187 YVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS 246
+L E+ D + + + A+ R ++A V R+ + G+
Sbjct: 491 RLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGE------------------ 532
Query: 247 SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASV 306
VKDI + + MI +Y +N N I+++ +M + PD+ A V
Sbjct: 533 ------VKDISV---------FGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMV 577
Query: 307 LPACG 311
L A G
Sbjct: 578 LNAYG 582
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 113/259 (43%), Gaps = 21/259 (8%)
Query: 292 EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCL 351
E+++ P VL + + + + ++ L P+ ++LI + + G
Sbjct: 147 EEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMF 206
Query: 352 EDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI 407
+ A KM+ D+ +++LI A+++FS ++ SGI+PD +A+ ++
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 408 LSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEP 467
++ + L E ++ K+M ++ + P ++ L+ + + EA V +M
Sbjct: 267 INVYGKAKLFREARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEM---- 321
Query: 468 NERVWGTLLSSCR----VYSNMDIGLLAADNL------LQLSPEQSGYYVLLSNIYAKAG 517
E L++C VY +D+ + AD L + + P Y +L +Y +A
Sbjct: 322 KEVNCALDLTTCNIMIDVYGQLDM-VKEADRLFWSLRKMDIEPNVVSYNTIL-RVYGEAE 379
Query: 518 RWKEVTEVRSLMKRRRIRK 536
+ E + LM+R+ I +
Sbjct: 380 LFGEAIHLFRLMQRKDIEQ 398
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 189/398 (47%), Gaps = 14/398 (3%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E ++V + ++ Y + + +DA+ + +MV G+RPD T+ ++ + +
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 136
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYA 208
L M++ NL +++ K G + A +L++M DVV +N+++
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 196
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLV 266
+ DDAL + +EM+ G +P+ T +SL+ + + SD + D+ +LV
Sbjct: 197 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 256
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
++N +I ++K A L+ M K ++PD T S++ L +++ E++
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 316
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQG 382
K P+L N+LI + + +ED ++F +M R D ++T+LI G
Sbjct: 317 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDC 376
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
NA +F +M + G+ PD + + +L ++G LE+ F M I I +
Sbjct: 377 DNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS-EIKLDIYIYTT 435
Query: 443 LVDLLGRAGRVDEAYDVIKQMPL---EPNERVWGTLLS 477
+++ + +AG+VD+ +D+ + L +PN + T++S
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 155/331 (46%), Gaps = 16/331 (4%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS-DNLRFGL 151
E +VV +N +I S R +DAL +F+EM G RP+ TY ++ +C CS
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI-SCLCSYGRWSDAS 240
Query: 152 QLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGY 207
QL M++ +++ NL N LI + K G +EA + D+M +R D+ ++NS++ G+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 208 AQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSL-- 265
+ R D A ++ M PD T +L+ S V ++F + + L
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK--SKRVEDGTELFREMSHRGLVG 358
Query: 266 --VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
V++ +I + NA ++ QM V PD +T + +L + L +
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMT 379
+Y+++ +++ ++ + ++I+ + G ++D +F + + +V ++ ++IS
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 380 GQGCNALALFSEMQNSGISPDHIAFVAILSA 410
A AL +M+ G PD + ++ A
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 205/423 (48%), Gaps = 20/423 (4%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E ++V + ++ Y +++ +DA+ + +MV G++PD +T+ ++ + +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR----RDVVSWNSMVAGYA 208
L M++ +L +++ K G + A +L +M + DVV +N+++ G
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLV 266
+ DDAL + EMD+ G +PD T +SL+ + N SD + D+ ++V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
+++ +I ++K A LY +M K ++PD T +S++ L + + E +
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQG 382
K PN++ ++LI + + +E+ ++F +M R + ++T+LI +
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
NA +F +M + G+ P+ + + +L +G L + V F+ + + P I +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNI 508
Query: 443 LVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSS-CRVYSNMDIGLLAADNLLQL 498
+++ + +AG+V++ +++ + L+ PN + T++S CR S + AD+LL+
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE-----ADSLLKK 563
Query: 499 SPE 501
E
Sbjct: 564 MKE 566
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 52/384 (13%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC-----SDNL 147
E +VV YN +I + +DAL +F EM N G RPD +TY ++ +C C SD
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI-SCLCNYGRWSDAS 313
Query: 148 RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSM 203
R L M++ +++ N+ + LI + K G L+EA + DEM +R D+ +++S+
Sbjct: 314 R----LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
+ G+ + R D+A + M P+ T ++L+ + V ++F + ++
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK--AKRVEEGMELFREMSQR 427
Query: 264 SLV----SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
LV ++ +I + + NA ++ QM V P+ +T +L L
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISAYGMT 379
+ EY++R + P++ N +I+ + G +ED ++F
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF--------------------- 526
Query: 380 GQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH 439
CN L+L G+SP+ IA+ ++S G EE K+M +D + P
Sbjct: 527 ---CN-LSL------KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGT 575
Query: 440 FACLVDLLGRAGRVDEAYDVIKQM 463
+ L+ R G + + ++IK+M
Sbjct: 576 YNTLIRARLRDGDREASAELIKEM 599
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/514 (19%), Positives = 227/514 (44%), Gaps = 41/514 (7%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
++V +N ++ + + + + +M G D YTY + L L +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYAQN 210
M+K+ + ++ + L++ Y + +A ++D+M + D ++ +++ G +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK------- 263
+ +A+ + +M G +PD T +++ + D+ ++L KK
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD------IDLALSLLKKMEKGKIE 255
Query: 264 -SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRI 322
+V +N +I K +A++L+ +M+ + PD T +S++ + R+
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 323 HEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGM 378
+ +K+ PN++ ++LID + + G L +A+K++D+M R D+ +++SLI+ + M
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
+ A +F M + P+ + + ++ + +EEG F++M+ + +
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYSNMDIGLLAADNL 495
+ L+ +A D A V KQM + PN + LL + ++ + L
Sbjct: 436 -YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 496 LQ--LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFL 553
+ + P+ Y +++ + KAG+ ++ E+ + + + +P + + N+ + F
Sbjct: 495 QRSTMEPDIYTYNIMIEGM-CKAGKVEDGWELFCNLSLKGV--SPNV--IAYNTMISGFC 549
Query: 554 AGDTSHPQSKEIYEELYVLVGKMKELGYVPETDS 587
K EE L+ KMKE G +P + +
Sbjct: 550 --------RKGSKEEADSLLKKMKEDGPLPNSGT 575
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 167/366 (45%), Gaps = 46/366 (12%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRS-YVNNRWYNDALLVFREMVNG 125
L+ AY G A VF+ + E N+V YN +I + + F EM
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G +PD T+ +L CS L M R++ ++F N L+ K G + A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 186 RYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
+L +MP + +VVS+++++ G+A+ RFD+AL + EM LG
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG-------------- 439
Query: 242 VTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAI 301
I L++ VS+N ++++Y K A+D+ +M ++ D +
Sbjct: 440 ----------------IALDR---VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 302 TCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM 361
T ++L G +++ ++R+ + PNLL ++LID Y++ G ++A ++F +
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 362 KF----RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLL 417
K DV +++LI A G +A++L EM GISP+ + + +I+ A S +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 418 EEGKVY 423
+ Y
Sbjct: 601 DRSADY 606
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 120/244 (49%), Gaps = 12/244 (4%)
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
++++ G + + +RI E + ++LI Y R G E+A VF+ MK
Sbjct: 236 ASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 363 ---FR-DVASWTSLISAYGMTGQGCNALA-LFSEMQNSGISPDHIAFVAILSACSHSGLL 417
R ++ ++ ++I A G G +A F EMQ +G+ PD I F ++L+ CS GL
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 418 EEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGT 474
E + F +MT+ RI + + L+D + + G++D A++++ QMP++ PN + T
Sbjct: 356 EAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 475 LLSSCRVYSNMD--IGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRR 532
++ D + L L ++ ++ Y LLS IY K GR +E ++ M
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS-IYTKVGRSEEALDILREMASV 473
Query: 533 RIRK 536
I+K
Sbjct: 474 GIKK 477
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 77/363 (21%)
Query: 76 AACGEPG---TARKVFDEIS----ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFR 128
A C G AR +FDE++ E++V YN ++ + + A + +M
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 129 PDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
P+ +Y V+ + + L L G M + + + N L+S+Y K G EA +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 189 LDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
L EM ++DVV++N+++ GY + ++D+ +V EM P+ T ++L+
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY-- 524
Query: 245 TSSDNVLYVKDIFINLEKKS------LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP 298
S LY + + I E KS +V ++ +I KN + G+A+ L +M K + P
Sbjct: 525 --SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 299 DAITCASVLPACGD----------------------LSAL----------LLGRRIHEYV 326
+ +T S++ A G LSAL L G+ E
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESN 642
Query: 327 ERK------------------------KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
R +++PN++ +++++ +RC EDA + ++++
Sbjct: 643 NRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Query: 363 FRD 365
D
Sbjct: 703 LFD 705
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 153/341 (44%), Gaps = 27/341 (7%)
Query: 166 LFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYAQN-MRFDDALEVC 220
++ + LIS YG+ G EA V + M R ++V++N+++ + M F +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 221 REMDDLGQKPDAGTMASLMPAVTNTSSDNVLY--VKDIFINLEKKSL----VSWNVMITV 274
EM G +PD T SL+ S L+ +++F + + + S+N ++
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVC----SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383
Query: 275 YMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPN 334
K A ++ QM + P+ ++ ++V+ G A ++ + E + L
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID--GFAKAGRFDEALNLFGEMRYLGIA 441
Query: 335 L--LLENSLIDMYARCGCLEDAQKVFDKMKF----RDVASWTSLISAYGMTGQGCNALAL 388
L + N+L+ +Y + G E+A + +M +DV ++ +L+ YG G+ +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
F+EM+ + P+ + + ++ S GL +E F++ + + ++ L+D L
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF-KSAGLRADVVLYSALIDALC 560
Query: 449 RAGRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMD 486
+ G V A +I +M E PN + +++ + + MD
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 197/402 (49%), Gaps = 15/402 (3%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E ++V + ++ Y + + +DA+ + +MV G+RPD T+ ++ + +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYA 208
L M++ NL +++ K G + A +L++M +VV +++++
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLV 266
+ DDAL + EM++ G +P+ T +SL+ + N SD + D+ ++V
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
++N +I ++K A LY +M K ++PD T +S++ L + + E +
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQG 382
K PN++ N+LI+ + + +++ ++F +M R + ++T+LI +
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
NA +F +M + G+ P+ + + +L +G LE+ V F+ + ++ P I +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNI 510
Query: 443 LVDLLGRAGRVDEAYDVIKQMPL---EPNERVWGTLLSS-CR 480
+++ + +AG+V++ +D+ + L +P+ ++ T++S CR
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 154/321 (47%), Gaps = 16/321 (4%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS-DNLRFGL 151
E NVV Y+ +I S R +DAL +F EM N G RP+ TY ++ +C C+ +
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI-SCLCNYERWSDAS 315
Query: 152 QLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGY 207
+L M++ +++ N+ N LI + K G L+EA + DEM +R D+ +++S++ G+
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 208 AQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSL-- 265
+ R D+A + M P+ T +L+ + + ++F + ++ L
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF--CKAKRIDEGVELFREMSQRGLVG 433
Query: 266 --VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
V++ +I + + NA ++ QM V P+ +T ++L L +
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMT 379
EY++R K+ P + N +I+ + G +ED +F + + DV + ++IS +
Sbjct: 494 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Query: 380 GQGCNALALFSEMQNSGISPD 400
G A ALF +M+ G PD
Sbjct: 554 GLKEEADALFRKMREDGPLPD 574
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/538 (21%), Positives = 240/538 (44%), Gaps = 62/538 (11%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
Y ++R+ +++ +DA+ +F MV P + + +L A + + L M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFD 214
++ + NL+ N LI+ + + + A +L +M + +V+ +S++ GY R
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPA--VTNTSSDNVLYVK------------------ 254
DA+ + +M ++G +PD T +L+ + N +S+ V V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 255 ---------DIFINLEKK--------SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
D+ NL K ++V ++ +I K +A++L+ +ME V
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
P+ IT +S++ + R+ + +K+ PN++ N+LID + + G L +A+K+
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 358 FDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
+D+M R D+ +++SLI+ + M + A +F M + P+ + + +++
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 414 SGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNER 470
+ ++EG F++M+ + + + L+ +A D A V KQM + PN
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 471 VWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGY-YVLLSNIYAKAGRWKEVTEVRSLM 529
+ TLL ++ ++ + L + E + Y Y ++ KAG+ ++ ++ +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 530 KRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDS 587
+ ++ P + + N+ + F K + EE L KM+E G +P++ +
Sbjct: 532 SLKGVK--PDV--IIYNTMISGFC--------RKGLKEEADALFRKMREDGPLPDSGT 577
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 111/256 (43%), Gaps = 36/256 (14%)
Query: 8 NISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIAL----------------KN 51
N+ AL+ +F K ++ + E++ +++D PDI K+
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLINGFCMHDRLDEAKH 386
Query: 52 VHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYV 107
+ +I + N L+ + ++F E+S+R N V Y +I +
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 108 NNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLF 167
R ++A +VF++MV+ G P+ TY +L + L + + + + +++ ++
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 168 VGNGLISMYGKCG---------CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALE 218
N +I K G C L + V + DV+ +N+M++G+ + ++A
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGV-----KPDVIIYNTMISGFCRKGLKEEADA 561
Query: 219 VCREMDDLGQKPDAGT 234
+ R+M + G PD+GT
Sbjct: 562 LFRKMREDGPLPDSGT 577
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 197/402 (49%), Gaps = 26/402 (6%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
++V +N ++ + V + Y+ + + ++M G R D YT+ V+ C + L +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSIL 143
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYAQN 210
G MLK+ + + L++ + + + +A ++D+M + D+V++N+++ +
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVSW 268
R +DA + +E++ G +P+ T +L+ + N+S SD + D+ +++++
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHE---- 324
+ ++ ++KN A +L+ +M + ++PD +T +S+ ++ L L RI E
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL------INGLCLHDRIDEANQM 317
Query: 325 --YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVAS----WTSLISAYGM 378
+ K +++ N+LI+ + + +ED K+F +M R + S + +LI +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
G A FS+M GISPD + +L +G LE+ V F+ M + I
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM-QKREMDLDIV 436
Query: 439 HFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVWGTLLS 477
+ ++ + + G+V+EA+ + + L+P+ + T++S
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 149/341 (43%), Gaps = 41/341 (12%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
++V YN +I S + NDA F+E+ G RP+ TY ++ S +L
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQN 210
M+K ++ N+ + L+ + K G +LEA+ + +EM R D+V+++S++ G +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNV 270
R D+A +M DL G +A +VS+N
Sbjct: 309 DRIDEA----NQMFDL--MVSKGCLA---------------------------DVVSYNT 335
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+I + K + + L+ +M + + + +T +++ + + ++
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNAL 386
+ P++ N L+ G LE A +F+ M+ R D+ ++T++I TG+ A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
+LF + G+ PD + + ++S GLL E + + +M
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 197/450 (43%), Gaps = 55/450 (12%)
Query: 74 AYAACGEPGTARKVFDEI----SERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
Y G+ TA V+ + NVV Y ++I+ + +A ++ +++ G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 130 DNYTYPCVLKA-CSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA-RY 187
TY ++ C C NLR G L+ M+K+ ++ + L+ K G +L A R+
Sbjct: 425 SIVTYSSLIDGFCKCG-NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 188 ---VLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
+L + R +VV +NS++ G+ + RFD+AL+V R M G KPD T ++M
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV--- 540
Query: 245 TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCA 304
++M + K+ P + L+ M+++++ D C
Sbjct: 541 ------------------------SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN 576
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
V+ + + + K+ P+++ N++I Y L++A+++F+ +K
Sbjct: 577 VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVT 636
Query: 365 ----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEG 420
+ + T LI A+ +FS M G P+ + + ++ S S +E
Sbjct: 637 PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGS 696
Query: 421 KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ---MPLEPNERVWGTLLS 477
F++M + I+P I ++ ++D L + GRVDEA ++ Q L P+ + L+
Sbjct: 697 FKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 478 S-CRV---------YSNMDIGLLAADNLLQ 497
C+V Y +M + D+LLQ
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 785
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
++V++ +I + K A DL+ ME+ +EPD I ++++ L +G ++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMT 379
K ++ ++++ +S ID+Y + G L A V+ +M + +V ++T LI
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 380 GQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH 439
G+ A ++ ++ G+ P + + +++ G L G ++ M P +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI-KMGYPPDVVI 463
Query: 440 FACLVDLLGRAG 451
+ LVD L + G
Sbjct: 464 YGVLVDGLSKQG 475
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAY---GMTGQGCNA 385
PN++ +LI+ + + G ++ A +F M+ R D+ ++++LI Y GM G G
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK- 342
Query: 386 LALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVD 445
LFS+ + G+ D + F + + SG L V +K+M I+P + + L+
Sbjct: 343 --LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTILIK 399
Query: 446 LLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLS-PE 501
L + GR+ EA+ + Q+ +EP+ + +L+ N+ G ++++++ P
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 502 QSGYYVLLSNIYAKAG 517
Y +L + +K G
Sbjct: 460 DVVIYGVLVDGLSKQG 475
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 199/427 (46%), Gaps = 29/427 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISER-----NVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
L+R + G+ A K+ EI E +V+ YNVMI Y N+AL V M
Sbjct: 143 LIRGFCRLGKTRKAAKIL-EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 198
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
PD TY +L++ S L+ +++ ML+ ++ LI + + A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 186 RYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
+LDEM R DVV++N +V G + R D+A++ +M G +P+ T ++ +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 242 VTNTSS--DNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
+ +T D + D+ S+V++N++I + + G AID+ +M + +P+
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLR---PNLLLENSLIDMYARCGCLEDAQK 356
+++ +L G + R I EY+ER R P+++ N+++ + G +EDA +
Sbjct: 379 SLSYNPLLH--GFCKEKKMDRAI-EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE 435
Query: 357 VFDKMKFRDVA----SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACS 412
+ +++ + + ++ ++I G+ A+ L EM+ + PD I + +++ S
Sbjct: 436 ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLS 495
Query: 413 HSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNE 469
G ++E +F + + I P F ++ L ++ + D A D + M +PNE
Sbjct: 496 REGKVDEAIKFFHEF-ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 470 RVWGTLL 476
+ L+
Sbjct: 555 TSYTILI 561
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 167/389 (42%), Gaps = 49/389 (12%)
Query: 32 AVELLGKAL--DQYPDIIALKNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGT--ARKV 87
A+E+L + L D YPD+I +T LI A C + G A K+
Sbjct: 223 AMEVLDRMLQRDCYPDVI----TYTILIE-----------------ATCRDSGVGHAMKL 261
Query: 88 FDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
DE+ +R +VV YNV++ ++A+ +M + G +P+ T+ +L++
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVS 199
+ +L ML+ ++ N LI+ + G L A +L++MP+ + +S
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 200 WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFIN 259
+N ++ G+ + + D A+E M G PD T +++ A+ V +I
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDG--KVEDAVEILNQ 439
Query: 260 LEKKS----LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
L K L+++N +I K G AI L +M +++PD IT +S++
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-------DVAS 368
+ + ER +RPN + NS+ M C + + D + F + S
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSI--MLGLCKSRQ-TDRAIDFLVFMINRGCKPNETS 556
Query: 369 WTSLISAYGMTGQGCNALALFSEMQNSGI 397
+T LI G AL L +E+ N G+
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 11/236 (4%)
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
PD I C +++ L +I E +E P+++ N +I Y + G + +A V
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 358 FDKMKFR-DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA-CSHSG 415
D+M DV ++ +++ + +G+ A+ + M PD I + ++ A C SG
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 416 LLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVW 472
+ K+ +M D TP + + LV+ + + GR+DEA + MP +PN
Sbjct: 255 VGHAMKL-LDEMR-DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 473 GTLLSS-CRVYSNMDIGLLAADNLLQ-LSPEQSGYYVLLSNIYAKA--GRWKEVTE 524
+L S C MD L AD L + SP + +L++ + K GR ++ E
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 162/335 (48%), Gaps = 24/335 (7%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC-----SDNL 147
E VV YN +I + N + NDAL +F EM N G RP+ TY +++ C C SD
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWSDAS 311
Query: 148 RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSM 203
R L M++ +++ N+ + LI + K G L+EA + DEM +R D+ +++S+
Sbjct: 312 R----LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
+ G+ + R D+A + M P+ T +L+ + V ++F + ++
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF--CKAKRVDEGMELFREMSQR 425
Query: 264 SL----VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
L V++ +I + + NA ++ QM V PD +T + +L + +
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISA 375
+ EY++R K+ P++ N +I+ + G +ED +F + + +V ++T+++S
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA 410
+ G A ALF EM+ G PD + ++ A
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 193/402 (48%), Gaps = 15/402 (3%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E ++V N ++ + + +DA+ + +MV G++PD++T+ ++ + +
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD----VVSWNSMVAGYA 208
L M+ +L +++ K G + A +L +M + VV +N+++
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLV 266
+DAL + EMD+ G +P+ T SL+ + N SD + D+ ++V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
+++ +I ++K A LY +M K ++PD T +S++ L + + E +
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQG 382
K PN++ N+LI + + +++ ++F +M R + ++T+LI + +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
NA +F +M + G+ PD + + +L ++G +E V F+ + ++ P I +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNI 506
Query: 443 LVDLLGRAGRVDEAYDVIKQMPL---EPNERVWGTLLSS-CR 480
+++ + +AG+V++ +D+ + L +PN + T++S CR
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 179/383 (46%), Gaps = 14/383 (3%)
Query: 107 VNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL 166
+N+ +DA+ +F +MV P + +L A + + + L M + + NL
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 167 FVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCRE 222
+ + LI+ + + L A VL +M + D+V+ NS++ G+ R DA+ + +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 223 MDDLGQKPDAGTMASLMPAV--TNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSM 280
M ++G +PD+ T +L+ + N +S+ V V + + + LV++ +++ K
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 281 PGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENS 340
A+ L +ME+ ++EP + +++ A + + + ++ K +RPN++ NS
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 341 LIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSG 396
LI G DA ++ M R +V ++++LI A+ G+ A L+ EM
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 397 ISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA 456
I PD + ++++ L+E K F+ M P + + L+ +A RVDE
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 457 YDVIKQMP---LEPNERVWGTLL 476
++ ++M L N + TL+
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLI 438
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/456 (23%), Positives = 208/456 (45%), Gaps = 50/456 (10%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+M+A+ A E +A + ++++ N V Y +I S N+AL + EM G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 127 FRPDNYTY-PCVLKACS-------------------CSDNLRFGLQLHGAMLKVRLDW-- 164
PD T+ +L C D++ +G ++G R+D
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 165 NLF---------VGNGLISMYGKCGCLLEARYVLDEMPRR-----DVVSWNSMVAGYAQN 210
+LF + N LI + G L +A+ VL +M DV ++NS++ GY +
Sbjct: 343 DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLY--VKDIFINLEKKSLVSW 268
ALEV +M + G KP+ + L+ + Y + ++ + K + V +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF 462
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N +I+ + K A++++ +M + +PD T S++ ++ + + +
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCN 384
+ + N + N+LI+ + R G +++A+K+ ++M F+ D ++ SLI G+
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
A +LF +M G +P +I+ +++ SG++EE + K+M TP I F L+
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLI 641
Query: 445 DLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLS 477
+ L RAGR+++ + +++ E P+ + TL+S
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 162/371 (43%), Gaps = 11/371 (2%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNG-GFRP 129
LM G A+ +F I + +V +N +I +V + +DA V +MV G P
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
D TY ++ + L++ M N++ L+ + K G + EA VL
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 190 DEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
+EM + + V +N +++ + + R +A+E+ REM G KPD T SL+ +
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 246 SS--DNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITC 303
+ ++D+ + V++N +I +++ A L +M D IT
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 304 ASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF 363
S++ + R + E + R P+ + N LI+ R G +E+A + +M
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 364 R----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE 419
R D+ ++ SLI+ G+ + L +F ++Q GI PD + F ++S G + +
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 420 GKVYFKQMTDD 430
+ + +D
Sbjct: 688 ACLLLDEGIED 698
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 174/415 (41%), Gaps = 17/415 (4%)
Query: 66 SLGIKLMRAYAACGEPGTARKVFDEIS-----ERNVVFYNVMIRSYVNNRWYNDALLVFR 120
SL I +MR Y G PG ++ E+ E YNV++ V+ + A VF
Sbjct: 147 SLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFY 206
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
+M++ P +T+ V+KA + + L L M K N + LI KC
Sbjct: 207 DMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCN 266
Query: 181 CLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMA 236
+ EA +L+EM D ++N ++ G + R ++A ++ M G PD T
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326
Query: 237 SLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKS-E 295
LM + V KD+F + K +V +N +I ++ + +A + M S
Sbjct: 327 YLMNGLCKIG--RVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
+ PD T S++ + L + + K +PN+ L+D + + G +++A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 356 KVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC 411
V ++M + + LISA+ + A+ +F EM G PD F +++S
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 412 SHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE 466
++ + M + + + + L++ R G + EA ++ +M +
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVT-YNTLINAFLRRGEIKEARKLVNEMVFQ 558
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 114/520 (21%), Positives = 218/520 (41%), Gaps = 96/520 (18%)
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
YN+MIR + + W + A +F EM +PD TY ++ A + R+ + L M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
L+ + + N LI+ G G +W +AL
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSG------------------NWR-------------EAL 101
Query: 218 EVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMK 277
EVC++M D G PD LV+ N++++ Y
Sbjct: 102 EVCKKMTDNGVGPD---------------------------------LVTHNIVLSAYKS 128
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL----SALLLGRRIHEYVERKKLRP 333
A+ + M+ ++V PD T ++ L AL L + E +R + RP
Sbjct: 129 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE--KRAECRP 186
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALF 389
+++ S++ +Y+ G +E+ + VF+ M ++ S+ +L+ AY + G AL++
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
+++ +GI PD +++ +L++ S + K F M + R P + + L+D G
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGS 305
Query: 450 AGRVDEAYDVIKQMP---LEPNERVWGTLLSSC---RVYSNMDIGLLAADNLLQLSPEQS 503
G + EA ++ +QM ++PN TLL++C + N+D L AA + ++ +
Sbjct: 306 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS-RGINLNTA 364
Query: 504 GYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRK--------TPGISNVELNSQVHTFLA- 554
Y + + Y A ++ + M++++++ G + + ++L
Sbjct: 365 AYNSAIGS-YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE 423
Query: 555 -GDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVE 593
D S P +KE+Y + K G V E +S + ++
Sbjct: 424 MEDLSIPLTKEVYSSVLCAYSKQ---GQVTEAESIFNQMK 460
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 164/372 (44%), Gaps = 23/372 (6%)
Query: 77 ACGEPGTAR-------KVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
ACG G R K+ D ++V +N+++ +Y + R Y+ AL F M RP
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW--NLFVGNGLISMYGKCGCLLEARY 187
D T+ ++ S L L +M + R + ++ ++ +Y G + R
Sbjct: 150 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 209
Query: 188 VLDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
V + M + ++VS+N+++ YA + AL V ++ G PD + L+ +
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 244 NTSSDNVLYVKDIFINLEKK----SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
+ K++F+ + K+ ++V++N +I Y N A++++ QME+ ++P+
Sbjct: 270 RSRQPG--KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD 359
++ ++L AC + + + + + N NS I Y LE A ++
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 360 KMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
M+ + D ++T LIS + A++ EM++ I + ++L A S G
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 447
Query: 416 LLEEGKVYFKQM 427
+ E + F QM
Sbjct: 448 QVTEAESIFNQM 459
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 187/437 (42%), Gaps = 93/437 (21%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+M Y+ GE R VF+ + N+V YN ++ +Y + AL V ++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
PD +Y C+L + YG+ +A+
Sbjct: 254 IIPDVVSYTCLLNS-----------------------------------YGRSRQPGKAK 278
Query: 187 YVL----DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
V E + +VV++N+++ Y N +A+E+ R+M+ G KP+ ++ +L+ A
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 243 TNTSS----DNVL-YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
+ + D VL + INL + ++N I Y+ + AI LY M K +V+
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINL---NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 395
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLE--NSLIDMYARCGCLEDAQ 355
D++T ++ +S I E + L L E +S++ Y++ G + +A+
Sbjct: 396 ADSVTFTILISGSCRMSKY--PEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Query: 356 KVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSAC 411
+F++MK DV ++TS++ AY + + A LF EM+ +GI PD IA A++ A
Sbjct: 454 SIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Query: 412 SHSG----------LLEE------GKVYFK------------------QMTDDYRITPRI 437
+ G L+ E G V+F+ QM D Y + I
Sbjct: 514 NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSI 573
Query: 438 EHFACLVDLLGRAGRVD 454
++ L G++G+V+
Sbjct: 574 GLTNQMLHLFGKSGKVE 590
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/520 (21%), Positives = 218/520 (41%), Gaps = 96/520 (18%)
Query: 98 FYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAM 157
YN+MIR + + W + A +F EM +PD TY ++ A + R+ + L M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDAL 217
L+ + + N LI+ G G +W +AL
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSG------------------NWR-------------EAL 233
Query: 218 EVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMK 277
EVC++M D G PD LV+ N++++ Y
Sbjct: 234 EVCKKMTDNGVGPD---------------------------------LVTHNIVLSAYKS 260
Query: 278 NSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDL----SALLLGRRIHEYVERKKLRP 333
A+ + M+ ++V PD T ++ L AL L + E +R + RP
Sbjct: 261 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE--KRAECRP 318
Query: 334 NLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALF 389
+++ S++ +Y+ G +E+ + VF+ M ++ S+ +L+ AY + G AL++
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGR 449
+++ +GI PD +++ +L++ S + K F M + R P + + L+D G
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAYGS 437
Query: 450 AGRVDEAYDVIKQMP---LEPNERVWGTLLSSC---RVYSNMDIGLLAADNLLQLSPEQS 503
G + EA ++ +QM ++PN TLL++C + N+D L AA + ++ +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS-RGINLNTA 496
Query: 504 GYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRK--------TPGISNVELNSQVHTFLA- 554
Y + + Y A ++ + M++++++ G + + ++L
Sbjct: 497 AYNSAIGS-YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE 555
Query: 555 -GDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVE 593
D S P +KE+Y + K G V E +S + ++
Sbjct: 556 MEDLSIPLTKEVYSSVLCAYSKQ---GQVTEAESIFNQMK 592
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 164/372 (44%), Gaps = 23/372 (6%)
Query: 77 ACGEPGTAR-------KVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
ACG G R K+ D ++V +N+++ +Y + R Y+ AL F M RP
Sbjct: 222 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 281
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDW--NLFVGNGLISMYGKCGCLLEARY 187
D T+ ++ S L L +M + R + ++ ++ +Y G + R
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRA 341
Query: 188 VLDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVT 243
V + M + ++VS+N+++ YA + AL V ++ G PD + L+ +
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 244 NTSSDNVLYVKDIFINLEKK----SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
+ K++F+ + K+ ++V++N +I Y N A++++ QME+ ++P+
Sbjct: 402 RSRQPG--KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD 359
++ ++L AC + + + + + N NS I Y LE A ++
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 360 KMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSG 415
M+ + D ++T LIS + A++ EM++ I + ++L A S G
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 579
Query: 416 LLEEGKVYFKQM 427
+ E + F QM
Sbjct: 580 QVTEAESIFNQM 591
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 187/435 (42%), Gaps = 89/435 (20%)
Query: 71 LMRAYAACGEPGTARKVFD----EISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+M Y+ GE R VF+ E + N+V YN ++ +Y + AL V ++ G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
PD +Y C+L + YG+ +A+
Sbjct: 386 IIPDVVSYTCLLNS-----------------------------------YGRSRQPGKAK 410
Query: 187 YVL----DEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
V E + +VV++N+++ Y N +A+E+ R+M+ G KP+ ++ +L+ A
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 243 TNTSS----DNVL-YVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
+ + D VL + INL + ++N I Y+ + AI LY M K +V+
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINL---NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK 527
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
D++T ++ +S + +E + + +S++ Y++ G + +A+ +
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESI 587
Query: 358 FDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
F++MK DV ++TS++ AY + + A LF EM+ +GI PD IA A++ A +
Sbjct: 588 FNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNK 647
Query: 414 SG----------LLEE------GKVYFK------------------QMTDDYRITPRIEH 439
G L+ E G V+F+ QM D Y + I
Sbjct: 648 GGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGL 707
Query: 440 FACLVDLLGRAGRVD 454
++ L G++G+V+
Sbjct: 708 TNQMLHLFGKSGKVE 722
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 180/378 (47%), Gaps = 17/378 (4%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
Y +R+ ++ ++DA +F EM+ P + VL + + + L+ M
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYAQNMRFD 214
+ + +L+ LI + +C L A +L +M R +V+ S++ G+ Q RF
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVT-NTSSDNVLYVKDIFINLEKKSL----VSWN 269
+A+ + MD G P+ +++ + N +N L ++F +EKK + V++N
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL---EVFYCMEKKGIRADAVTYN 223
Query: 270 VMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERK 329
+I+ + +A L M K +++P+ I +++ LL R +++ + R+
Sbjct: 224 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 283
Query: 330 KLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISAYGMTGQGCNA 385
+ PN+ NSLI+ + GCL DA+ +FD M F DV ++ +LI+ + + + +
Sbjct: 284 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDG 343
Query: 386 LALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVD 445
+ LF EM G+ D + ++ +G L + F +M D ++P I + L+D
Sbjct: 344 MKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLD 402
Query: 446 LLGRAGRVDEAYDVIKQM 463
L G++++A +++ +
Sbjct: 403 CLCNNGKIEKALVMVEDL 420
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 146/344 (42%), Gaps = 41/344 (11%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
NVV YN +I NR N+AL VF M G R D TY ++ S S +L
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV----SWNSMVAGYAQN 210
M+K ++D N+ LI + K G LLEAR + EM RR VV ++NS++ G+ +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNV 270
DA + M G PD +V++N
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPD---------------------------------VVTYNT 329
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+IT + K+ + + L+ +M + DA T +++ L + +++ +
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNAL 386
+ P+++ N L+D G +E A + + ++ D+ ++ +I T + A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
LF + G+ PD IA++ ++S GL E ++M +D
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
S+V + ++TV K + I LY +ME + D + ++ S L L +
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISAYGMT 379
+ + RP+++ SL++ + + ++A + D M +V + ++I+
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 197
Query: 380 GQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH 439
NAL +F M+ GI D + + ++S S+SG + + M +I P +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR-KIDPNVIF 256
Query: 440 FACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLS 477
F L+D + G + EA ++ K+M + PN + +L++
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 164/352 (46%), Gaps = 24/352 (6%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC-----SDNL 147
E V+ YN +I + +DAL +F+EM G RP+ TY ++ +C C SD
Sbjct: 253 EPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI-SCLCNYGRWSDAS 311
Query: 148 RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV----VSWNSM 203
R L M++ +++ ++F + LI + K G L+EA + DEM +R + V+++S+
Sbjct: 312 R----LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 367
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
+ G+ + R D+A ++ M PD T +L+ V ++F + ++
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK--RVEEGMEVFREMSQR 425
Query: 264 SLV----SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
LV ++N++I + A +++ +M V P+ +T ++L L
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISA 375
+ EY++R K+ P + N +I+ + G +ED +F + + DV ++ ++IS
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
+ G A ALF EM+ G P+ + ++ A G E K+M
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 191/402 (47%), Gaps = 15/402 (3%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E N+V + ++ Y +++ ++A+ + +M G++P+ T+ ++ + +
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD----VVSWNSMVAGYA 208
L M+ +L +++ K G A +L++M + V+ +N+++ G
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 267
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLV 266
+ DDAL + +EM+ G +P+ T +SL+ + N SD + D+ +
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
+++ +I ++K A LY +M K ++P +T +S++ L +++ E++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQG 382
K P+++ N+LI + + +E+ +VF +M R + ++ LI G
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
A +F EM + G+ P+ + + +L +G LE+ V F+ + ++ P I +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNI 506
Query: 443 LVDLLGRAGRVDEAYDVIKQMPL---EPNERVWGTLLSS-CR 480
+++ + +AG+V++ +D+ + L +P+ + T++S CR
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/482 (21%), Positives = 222/482 (46%), Gaps = 33/482 (6%)
Query: 121 EMVNGGFRPDNYTYPCVLKACSC-SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKC 179
+M N G ++YTY +L C C L L + G M+K+ + N+ + L++ Y
Sbjct: 106 QMQNLGIPHNHYTYS-ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 180 GCLLEARYVLDEM----PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTM 235
+ EA ++D+M + + V++N+++ G + + +A+ + M G +PD T
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 236 ASLMPAVTNTSSDNVLYVKDIFINLEKKSL----VSWNVMITVYMKNSMPGNAIDLYLQM 291
++ + ++ + ++ +E+ L + +N +I K +A++L+ +M
Sbjct: 225 GVVVNGLCKRGDTDLAF--NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 292 EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCL 351
E + P+ +T +S++ + R+ + +K+ P++ ++LID + + G L
Sbjct: 283 ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 342
Query: 352 EDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI 407
+A+K++D+M R + +++SLI+ + M + A +F M + PD + + +
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 408 LSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---P 464
+ +EEG F++M+ + + + L+ L +AG D A ++ K+M
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVT-YNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 465 LEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGY-YVLLSNIYAKAGRWKEVT 523
+ PN + TLL ++ ++ + L + E + Y Y ++ KAG+ ++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 524 EVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVP 583
++ + + ++ P + V N+ + F K EE L +MKE G +P
Sbjct: 522 DLFCNLSLKGVK--PDV--VAYNTMISGFC--------RKGSKEEADALFKEMKEDGTLP 569
Query: 584 ET 585
+
Sbjct: 570 NS 571
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 148/341 (43%), Gaps = 45/341 (13%)
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD--------------------------- 225
P ++ ++ +++ A+ +FD + + +M +
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 136
Query: 226 --------LGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVSWNVMITVY 275
LG +P+ T++SL+ ++ S+ V V +F+ + + V++N +I
Sbjct: 137 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGL 196
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
++ A+ L +M +PD +T V+ L + +E+ KL P +
Sbjct: 197 FLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGV 256
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSE 391
L+ N++ID + ++DA +F +M+ + +V +++SLIS G+ +A L S+
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M I+PD F A++ A G L E + + +M I P I ++ L++
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHD 375
Query: 452 RVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMDIGL 489
R+DEA + + M + P+ + TL+ Y ++ G+
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 207/486 (42%), Gaps = 98/486 (20%)
Query: 74 AYAACGEPGTARKVFDEI----SERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
Y G+ TA V+ + NVV Y ++I+ + +A ++ +++ G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 130 DNYTYPCVLKA-CSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA-RY 187
TY ++ C C NLR G L+ M+K+ ++ + L+ K G +L A R+
Sbjct: 425 SIVTYSSLIDGFCKCG-NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 188 ---VLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
+L + R +VV +NS++ G+ + RFD+AL+V R M G KPD T ++M
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM----- 538
Query: 245 TSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCA 304
V + A+ L+ +M K +EPDA+
Sbjct: 539 ----------------------------RVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 305 SVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD----- 359
+++ A +G ++ + ++R K+ ++ + N +I + +C +EDA K F+
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 360 KMKFRDVASWTSLISAY----------------GMTGQGCN------------------- 384
KM+ D+ ++ ++I Y +T G N
Sbjct: 631 KME-PDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
A+ +FS M G P+ + + ++ S S +E F++M + I+P I ++ ++
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIII 748
Query: 445 DLLGRAGRVDEAYDVIKQ---MPLEPNERVWGTLLSS-CRV---------YSNMDIGLLA 491
D L + GRVDEA ++ Q L P+ + L+ C+V Y +M +
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
Query: 492 ADNLLQ 497
D+LLQ
Sbjct: 809 PDDLLQ 814
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 161/393 (40%), Gaps = 45/393 (11%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
NVV + +I + + A +F+ M G PD Y ++ + L G +L
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQN 210
L + ++ V + I +Y K G L A V M + +VV++ ++ G Q+
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNV 270
R +A + ++ G +P S+V+++
Sbjct: 405 GRIYEAFGMYGQILKRGMEP---------------------------------SIVTYSS 431
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+I + K + LY M K PD + ++ +L R + +
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNAL 386
+R N+++ NSLID + R ++A KVF M DVA++T+++ M G+ AL
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDL 446
LF M G+ PD +A+ ++ A G F M + +I+ I ++ L
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHL 610
Query: 447 LGRAGRVDEA---YDVIKQMPLEPNERVWGTLL 476
L + R+++A ++ + + +EP+ + T++
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 135/326 (41%), Gaps = 44/326 (13%)
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
++V++ +I + K A DL+ ME+ +EPD I ++++ L +G ++
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLIS----- 374
K ++ ++++ +S ID+Y + G L A V+ +M + +V ++T LI
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 375 -----AYGMTGQ---------------------GCNAL----ALFSEMQNSGISPDHIAF 404
A+GM GQ C L AL+ +M G PD + +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 405 VAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM- 463
++ S GL+ + +M I + F L+D R R DEA V + M
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 464 --PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGY-YVLLSNIYAKAGRWK 520
++P+ + T++ + ++ L + ++ E Y L + + K +
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 521 EVTEVRSLMKRRRIRKTPGISNVELN 546
++ LM+R +I + NV ++
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIH 609
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 188/396 (47%), Gaps = 16/396 (4%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKA-CSCSDNLRFGLQL 153
++V + ++ + N R Y + ++M G D Y++ ++ C CS L F L +
Sbjct: 70 SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS-RLSFALSV 128
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQ 209
G M+K+ + ++ L+ + + +A ++ M + +VV +N+++ G +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVS 267
N + ALE+ EM+ G D T +L+ + + SD ++D+ +V+
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 268 WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVE 327
+ +I V++K A +LY +M +S V+P+ +T S++ L ++ + +
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 328 RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGC 383
K PN++ N+LI + + +++ K+F +M D+ ++ +LI Y G+
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACL 443
AL +F M + ++PD I +L +G +E V F M + + I + +
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG-IVAYNIM 427
Query: 444 VDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLL 476
+ L +A +V++A+++ ++P+E P+ R + ++
Sbjct: 428 IHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 158/356 (44%), Gaps = 33/356 (9%)
Query: 205 AGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-DNVLYV-KDIFINLEK 262
G+ ++RF+DA + EM P L+ A N + V+Y + + +
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 263 KSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA------CGDLSAL 316
L S+ ++I + + S A+ + +M K EP +T S+L GD +L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 317 LLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSL 372
++ + + PN+++ N+LID + G L A ++ ++M+ + DV ++ +L
Sbjct: 164 VI------LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217
Query: 373 ISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYR 432
++ +G+ +A + +M I+PD + F A++ G L+E + +K+M
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS-S 276
Query: 433 ITPRIEHFACLVDLLGRAGRVDEA---YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGL 489
+ P + +++ L GR+ +A +D++ PN + TL+S + +D G+
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 490 LAADNLLQ-LSPEQSGYYVLLSNI----YAKAGRWKEVTEVRSLMKRRRIRKTPGI 540
L Q +S E + N Y + G+ + ++ M RR+ TP I
Sbjct: 337 ----KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV--TPDI 386
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 135/346 (39%), Gaps = 41/346 (11%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E NVV YN +I N N AL + EM G D TY +L S +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDV----VSWNSMVAGYA 208
+ M+K ++ ++ LI ++ K G L EA+ + EM + V V++NS++ G
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSW 268
+ R DA K MAS K F N +V++
Sbjct: 293 MHGRLYDA------------KKTFDLMAS----------------KGCFPN-----VVTY 319
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N +I+ + K M + L+ +M D T +++ + L + I ++
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM----KFRDVASWTSLISAYGMTGQGCN 384
+++ P+++ L+ G +E A FD M K+ + ++ +I +
Sbjct: 380 RRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEK 439
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
A LF + G+ PD + ++ +G E ++M ++
Sbjct: 440 AWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 159/335 (47%), Gaps = 24/335 (7%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC-----SDNL 147
E +VV Y +I + N + NDAL +F EM N G RP+ TY +++ C C SD
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR-CLCNYGRWSDAS 310
Query: 148 RFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSM 203
R L M++ +++ N+ + LI + K G L+EA + DEM +R D+ +++S+
Sbjct: 311 R----LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 204 VAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK 263
+ G+ + R D+A + M P+ T +L+ + V ++F + ++
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK--AKRVEEGMELFREMSQR 424
Query: 264 SL----VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
L V++N +I + A ++ +M V PD IT + +L L
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISA 375
+ EY+++ K+ P++ N +I+ + G +ED +F + + +V +T++IS
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA 410
+ G A ALF EM+ G P+ + ++ A
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 175/396 (44%), Gaps = 42/396 (10%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
N V +N +I + ++A+ + MV G +PD +TY V+ ++ L L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
M K +++ DVV + +++ +
Sbjct: 244 KKMEKGKIEA-------------------------------DVVIYTTIIDALCNYKNVN 272
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVSWNVMI 272
DAL + EMD+ G +P+ T SL+ + N SD + D+ ++V+++ +I
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
++K A LY +M K ++PD T +S++ L + + E + K
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALAL 388
PN++ N+LI + + +E+ ++F +M R + ++ +LI G A +
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
F +M + G+ PD I + +L G LE+ V F+ + ++ P I + +++ +
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS-KMEPDIYTYNIMIEGMC 511
Query: 449 RAGRVDEAYDVIKQMPL---EPNERVWGTLLSS-CR 480
+AG+V++ +D+ + L +PN ++ T++S CR
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 196/437 (44%), Gaps = 17/437 (3%)
Query: 113 NDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGL 172
+DA+ +F EMV P + +L A + + + L M +R+ ++L+ N L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 173 ISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
I+ + + L A VL +M + D+V+ +S++ GY R +A+ + +M +
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 229 KPDAGTMASLMPAVT--NTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
+P+ T +L+ + N +S+ V + + + L ++ ++ K A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYA 346
L +MEK ++E D + +++ A + + + ++ K +RPN++ NSLI
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 347 RCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHI 402
G DA ++ M R +V ++++LI A+ G+ A L+ EM I PD
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 403 AFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
+ ++++ L+E K F+ M P + + L+ +A RV+E ++ ++
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 463 MP---LEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ--LSPEQSGYYVLLSNIYAKAG 517
M L N + TL+ + D+ ++ + P+ Y +LL + K G
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL-CKYG 479
Query: 518 RWKEVTEVRSLMKRRRI 534
+ ++ V +++ ++
Sbjct: 480 KLEKALVVFEYLQKSKM 496
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 105/534 (19%), Positives = 240/534 (44%), Gaps = 43/534 (8%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCS-DNLRFGLQL 153
++V +N ++ + ++ + + M N D Y+Y +L C C L L +
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN-ILINCFCRRSQLPLALAV 137
Query: 154 HGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEM----PRRDVVSWNSMVAGYAQ 209
G M+K+ + ++ + L++ Y + EA ++D+M + + V++N+++ G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKK------ 263
+ + +A+ + M G +PD T +++ + D+ ++L KK
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD------IDLALSLLKKMEKGKI 251
Query: 264 --SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRR 321
+V + +I +A++L+ +M+ + P+ +T S++ + R
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 322 IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYG 377
+ + +K+ PN++ ++LID + + G L +A+K++D+M R D+ +++SLI+ +
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRI 437
M + A +F M + P+ + + ++ + +EEG F++M+ + +
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 438 EHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYSNMDIGLLAADN 494
+ L+ L +AG D A + K+M + P+ + LL Y ++ L+ +
Sbjct: 432 T-YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490
Query: 495 LL--QLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF 552
L ++ P+ Y +++ + KAG+ ++ ++ + + V+ N ++T
Sbjct: 491 LQKSKMEPDIYTYNIMIEGM-CKAGKVEDGWDLFC---------SLSLKGVKPNVIIYTT 540
Query: 553 LAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSE 606
+ S K + EE L +MKE G +P + + + ++G A +E
Sbjct: 541 M---ISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 211/442 (47%), Gaps = 24/442 (5%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSD-NLRFGLQLHGAM 157
++++++SY + AL + GF P +Y VL A S N+ F + M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 158 LKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRF 213
L+ ++ N+F N LI + G + A + D+M + +VV++N+++ GY + +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 214 DDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSL--VSWNVM 271
DD ++ R M G +P+ + ++ + + +N SL V++N +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 272 ITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKL 331
I Y K A+ ++ +M + + P IT S++ + + R E++++ ++
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM---NRAMEFLDQMRV 373
Query: 332 R---PNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCN 384
R PN +L+D +++ G + +A +V +M V ++ +LI+ + +TG+ +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
A+A+ +M+ G+SPD +++ +LS S ++E ++M + I P ++ L+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKPDTITYSSLI 492
Query: 445 DLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ--LS 499
R EA D+ ++M L P+E + L+++ + +++ L + +++ +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 500 PEQSGYYVLLSNIYAKAGRWKE 521
P+ Y VL++ + K R +E
Sbjct: 553 PDVVTYSVLINGL-NKQSRTRE 573
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 186/415 (44%), Gaps = 22/415 (5%)
Query: 84 ARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLK 139
A VF E+ E NV YN++IR + + AL +F +M G P+ TY ++
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 140 ACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR---- 195
+ G +L +M L+ NL N +I+ + G + E +VL EM RR
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 196 DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKD 255
D V++N+++ GY + F AL + EM G P T SL+ ++ + N +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN--RAME 366
Query: 256 IFINLEKKSLV----SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+ + L ++ ++ + + A + +M + P +T +++
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 312 DLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVA 367
+ + E ++ K L P+++ ++++ + R +++A +V +M + D
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 368 SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
+++SLI + + A L+ EM G+ PD + A+++A G LE+ +M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 428 TDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSSC 479
+ + P + ++ L++ L + R EA ++ ++ E P++ + TL+ +C
Sbjct: 547 VEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 178/422 (42%), Gaps = 40/422 (9%)
Query: 68 GIKLMRAYAACG-EPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
G KL+R+ A G EP N++ YNV+I + V EM G
Sbjct: 259 GFKLLRSMALKGLEP-------------NLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
+ D TY ++K N L +H ML+ L ++ LI K G + A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 187 YVLDEMPRRDVV----SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA- 241
LD+M R + ++ ++V G++Q ++A V REM+D G P T +L+
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 242 -VTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
VT D + ++D+ +VS++ +++ + ++ A+ + +M + ++PD
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
IT +S++ + ++E + R L P+ +LI+ Y G LE A ++ ++
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 361 MKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH--- 413
M + DV +++ LI+ + A L ++ P + + ++ CS+
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEF 605
Query: 414 ------------SGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
G++ E F+ M P + ++ RAG + +AY + K
Sbjct: 606 KSVVSLIKGFCMKGMMTEADQVFESMLGKNH-KPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 462 QM 463
+M
Sbjct: 665 EM 666
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 115/264 (43%), Gaps = 25/264 (9%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ + G+ A V +++ E+ +VV Y+ ++ + + ++AL V REMV G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
+PD TY +++ + L+ ML+V L + F LI+ Y G L +A
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 187 YVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
+ +EM + DVV+++ ++ G + R +A + ++ P T +L+
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 243 TNTSSDNVLYV-------------KDIFINL----EKKSLVSWNVMITVYMKNSMPGNAI 285
+N +V+ + +F ++ K ++N+MI + + A
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 286 DLYLQMEKSEVEPDAITCASVLPA 309
LY +M KS +T +++ A
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKA 684
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 196/398 (49%), Gaps = 17/398 (4%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E ++V + ++ Y +++ +DA+ + +MV G++PD +T+ ++ + +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYA 208
L M++ +L +++ K G + A +L++M + +VV +N+++
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKK--- 263
+ + A+++ EM+ G +P+ T SL+ + N SD + ++ LEKK
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM---LEKKINP 326
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
++V++N +I + K A L+ +M + ++PD IT ++ + L +++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 324 EYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMT 379
+++ K PN+ N+LI+ + +C +ED ++F +M R + ++T++I +
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 380 GQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEH 439
G +A +F +M ++ + D + + +L G L+ V FK + + I
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELNIFI 505
Query: 440 FACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLS 477
+ +++ + +AG+V EA+D+ + ++P+ + T++S
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 167/361 (46%), Gaps = 11/361 (3%)
Query: 113 NDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGL 172
+DA+ +F +MV P + +L A + + + L M + + +L+ +
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 173 ISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
I+ + + L A VL +M + D+V+ +S++ GY + R DA+ + +M ++G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 229 KPDAGTMASLMPAVT--NTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID 286
KPD T +L+ + N +S+ V V + + LV++ ++ K A++
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 287 LYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYA 346
L +ME + ++ + + +++ + + + + +E K +RPN++ NSLI+
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 347 RCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHI 402
G DA ++ M + +V ++ +LI A+ G+ A L EM I PD I
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 403 AFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQ 462
+ +++ L+E K FK M P I+ + L++ + RV++ ++ ++
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSK-DCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 463 M 463
M
Sbjct: 424 M 424
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 23/262 (8%)
Query: 1 MKPPLSRNISKLQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIAL----------- 49
++ ++ N+ AL+ +F K ++ + E++ +++D PD I
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID--PDTITYNLLINGFCMHN 377
Query: 50 -----KNVHTKLIYLNSHENPSLGIKLMRAYAACGEPGTARKVFDEISER----NVVFYN 100
K + ++ + N L+ + C ++F E+S+R N V Y
Sbjct: 378 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Query: 101 VMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKV 160
+I+ + + A +VF++MV+ D TY +L L L + + K
Sbjct: 438 TIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS 497
Query: 161 RLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP-RRDVVSWNSMVAGYAQNMRFDDALEV 219
++ N+F+ N +I K G + EA + + + DVV++N+M++G +A ++
Sbjct: 498 EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 220 CREMDDLGQKPDAGTMASLMPA 241
R+M + G P++GT +L+ A
Sbjct: 558 FRKMKEDGTLPNSGTYNTLIRA 579
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 142/336 (42%), Gaps = 42/336 (12%)
Query: 84 ARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLK 139
A +F E+ + NVV YN +I N ++DA + M+ P+ T+ ++
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 140 ACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD--- 196
A L +LH M++ +D + N LI+ + L EA+ + M +D
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 197 -VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKD 255
+ ++N+++ G+ + R +D +E+ REM G V NT
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRG-------------LVGNT---------- 433
Query: 256 IFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSA 315
V++ +I + + +A ++ QM + V D +T + +L
Sbjct: 434 ----------VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR-DVASWTSLIS 374
L I +Y+++ ++ N+ + N++I+ + G + +A +F + + DV ++ ++IS
Sbjct: 484 LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Query: 375 AYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA 410
A LF +M+ G P+ + ++ A
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 172/361 (47%), Gaps = 26/361 (7%)
Query: 79 GEPGTARKVFDEIS----ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY 134
GEP A + +++ E +VV YN +I + +DA +F +M G +PD +TY
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 135 PCVLKACSC-----SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
++ +C C SD R L ML+ ++ +L N LI + K G L+EA +
Sbjct: 289 NPLI-SCLCNYGRWSDASR----LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 190 DEMPRR-----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTN 244
DEM + DVV++N+++ G+ + R ++ +EV REM G + T +L+
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 245 T-SSDNVLYV-KDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
DN V K + + ++++N+++ N A+ ++ M+K +++ D +T
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
+++ A + G + + K ++PN++ +++ + R G E+A +F +MK
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 363 ----FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLE 418
+ ++ +LI A G + L EM++ G + D F +++ H G L+
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLD 582
Query: 419 E 419
+
Sbjct: 583 K 583
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 160/360 (44%), Gaps = 24/360 (6%)
Query: 121 EMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCG 180
+M N G + YTY + L L + G M+K+ ++ N L++ +
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 181 CLLEARYVLDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMA 236
+ EA ++D+M + D V++ ++V G Q+ + +A+ + M G +PD T
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 237 SLMPAVTNTSSDNVLYVKDIFINLEKK--------SLVSWNVMITVYMKNSMPGNAIDLY 288
+++ + D+ +NL K +V +N +I K +A DL+
Sbjct: 220 AVINGLCKRGE------PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARC 348
+ME ++PD T ++ + R+ + K + P+L+ N+LID + +
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKE 333
Query: 349 GCLEDAQKVFDKMK-----FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
G L +A+K++D+M F DV ++ +LI + + + +F EM G+ + +
Sbjct: 334 GKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+ ++ + + ++ FKQM D + P I + L+D L G V+ A V + M
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYM 452
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 159/397 (40%), Gaps = 78/397 (19%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
+ V + ++ + ++A+ + MV G +PD TY V+ L L
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
M K +++ DVV +N+++ G + D
Sbjct: 239 NKMEKGKIE-------------------------------ADVVIYNTIIDGLCKYKHMD 267
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLVSWNVMI 272
DA ++ +M+ G KPD T L+ + N SD + D+ LV +N +I
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
++K A LY +M KS K
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKS----------------------------------KHCF 353
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALAL 388
P+++ N+LI + + +E+ +VF +M R + ++T+LI + NA +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD-DYRITPRIEHFACLVDLL 447
F +M + G+ PD + + +L ++G +E V F+ M D ++ I + +++ L
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD--IVTYTTMIEAL 471
Query: 448 GRAGRVDEAYDVIKQMPL---EPNERVWGTLLSS-CR 480
+AG+V++ +D+ + L +PN + T++S CR
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 157/389 (40%), Gaps = 47/389 (12%)
Query: 193 PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDD--------------------------- 225
P +V ++ +++ A+ +FD + + +M +
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 226 --------LGQKPDAGTMASLMPAVT--NTSSDNVLYVKDIFINLEKKSLVSWNVMITVY 275
LG P T+ SL+ N S+ V V + + V++ ++
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+++ A+ L +M +PD +T +V+ L + +E+ K+ ++
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSE 391
++ N++ID + ++DA +F+KM+ + DV ++ LIS G+ +A L S+
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M I+PD + F A++ A G L E + + +M P + + L+ +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 452 RVDEAYDVIKQMP---LEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ--LSPEQSGYY 506
RV+E +V ++M L N + TL+ + D + ++ + P+ Y
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 507 VLLSNIYAKAGRWKEVTEVRSLMKRRRIR 535
+LL + G + V M++R ++
Sbjct: 431 ILLDGL-CNNGNVETALVVFEYMQKRDMK 458
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 42/254 (16%)
Query: 5 LSRNISK----LQALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLN 60
L +NI+ AL+ +F K ++ + E++ K+ +PD++A
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV-KSKHCFPDVVAYNT--------- 361
Query: 61 SHENPSLGIKLMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDAL 116
L++ + +VF E+S+R N V Y +I + R ++A
Sbjct: 362 ----------LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 117 LVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMY 176
+VF++MV+ G PD TY +L + N+ L + M K + ++ +I
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 177 GKCG---------CLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLG 227
K G C L + V + +VV++ +M++G+ + ++A + EM + G
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGV-----KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 228 QKPDAGTMASLMPA 241
P++GT +L+ A
Sbjct: 527 PLPNSGTYNTLIRA 540
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 216/495 (43%), Gaps = 47/495 (9%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVN-NRWYNDALLVFREMVNG 125
++ AY+ G+ A +F+ + E +V YNV++ + R + L V EM +
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSK 275
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G + D +T VL AC+ LR + + + N L+ ++GK G EA
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 186 RYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
VL EM D V++N +VA Y + +A V M G P+A T +++ A
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 242 VTNTSSDNVLYVKDIFINLEKKSLV----SWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
++ +F ++++ V ++N ++++ K S I + M+ +
Sbjct: 396 YGKAGKED--EALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
P+ T ++L CG+ R+ ++ P+ N+LI Y RCG DA K+
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 358 FDKMKFRD----VASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
+ +M V ++ +L++A G + + S+M++ G P ++ +L +
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 414 SG----------LLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
G ++EG+++ M T + +F C L G + A+ + K+
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWM---LLRTLLLANFKCRA-LAGS----ERAFTLFKKH 625
Query: 464 PLEPNERVWGTLLSSCRVYSNMDI-----GLLAADNLLQLSPEQSGYYVLLSNIYAKAGR 518
+P+ ++ ++LS +++ ++ G+L + LSP+ Y L+ ++Y + G
Sbjct: 626 GYKPDMVIFNSMLS---IFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM-DMYVRRGE 681
Query: 519 -WKEVTEVRSLMKRR 532
WK +++L K +
Sbjct: 682 CWKAEEILKTLEKSQ 696
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 175/408 (42%), Gaps = 23/408 (5%)
Query: 74 AYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRP 129
AY G+ A K+F + E N YN ++ N+ + + +M + G P
Sbjct: 395 AYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSP 454
Query: 130 DNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL 189
+ T+ +L C +F ++ M + + N LIS YG+CG ++A +
Sbjct: 455 NRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 190 DEMPRRD----VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNT 245
EM R V ++N+++ A+ + V +M G KP + + ++
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK- 573
Query: 246 SSDNVLYVKDIFINLEKKSLV-SWNVMITVYMKN----SMPGNAIDLYLQMEKSEVEPDA 300
N L ++ I +++ + SW ++ T+ + N ++ G+ L +K +PD
Sbjct: 574 -GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTL-FKKHGYKPDM 631
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR---CGCLEDAQKV 357
+ S+L + I E + L P+L+ NSL+DMY R C E+ K
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 358 FDKMKFR-DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
+K + + D+ S+ ++I + G A+ + SEM GI P + +S + G+
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 417 LEEGKVYFKQMT-DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
E + + M +D R P F +VD RAG+ EA D + ++
Sbjct: 752 FAEIEDVIECMAKNDCR--PNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 122/310 (39%), Gaps = 20/310 (6%)
Query: 71 LMRAYAACGEPGTARKVFDEISERN----VVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ AY CG A K++ E++ V YN ++ + + V +M + G
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK---VRLDWNLFVGNGLISMYGKCGCLL 183
F+P +Y +L+ C G++ +K + W L L+ KC L
Sbjct: 557 FKPTETSYSLMLQ-CYAKGGNYLGIERIENRIKEGQIFPSWMLL--RTLLLANFKCRALA 613
Query: 184 EARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
+ + D+V +NSM++ + +N +D A + + + G PD T SLM
Sbjct: 614 GSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 240 PAVTNTSSDNVLYVKDIFINLEKKSL----VSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
++I LEK L VS+N +I + + + A+ + +M +
Sbjct: 674 DMYVRRG--ECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQ 355
+ P T + + + + E + + RPN L ++D Y R G +A
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAM 791
Query: 356 KVFDKMKFRD 365
K+K D
Sbjct: 792 DFVSKIKTFD 801
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 114/283 (40%), Gaps = 59/283 (20%)
Query: 317 LLGRRIHEYVERKKLRPNLLLENSLIDM---------YARCGCLEDAQKVFDKMK----F 363
+LGR +Y KL + L+ L+D+ Y+R G E A +F++MK
Sbjct: 184 ILGRE-SQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPS 242
Query: 364 RDVASWTSLISAYGMTGQGCNA-LALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKV 422
+ ++ ++ +G G+ L + EM++ G+ D +LSAC+ GLL E K
Sbjct: 243 PTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVY 482
+F ++ P + L+ + G+AG EA V+K+M E N SC
Sbjct: 303 FFAEL-KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM--EEN---------SC--- 347
Query: 483 SNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISN 542
P S Y L Y +AG KE V +M ++
Sbjct: 348 -----------------PADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK---------G 381
Query: 543 VELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPET 585
V N+ +T + D KE +E L MKE G VP T
Sbjct: 382 VMPNAITYTTVI-DAYGKAGKE--DEALKLFYSMKEAGCVPNT 421
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/410 (18%), Positives = 188/410 (45%), Gaps = 16/410 (3%)
Query: 70 KLMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNG 125
KLM G P A +F+ + E +++ Y ++ + + ++ L + ++
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
G +PD + ++ A S S NL +++ M + N LI YGK G L E+
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 186 RYVLDEMPRRDVV-----SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
+LD M R +++ + N +V + + ++A + +M G KPD T +L
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 241 A---VTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
A + +T + + + + N K ++ + ++ Y + A+ + +M++ V
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
P+ S++ +++ + + + +E ++P+++ ++L++ ++ G ++ +++
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 358 FDKMKF----RDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
+ M D+ +++ L Y G+ A + ++M+ G+ P+ + + I+S
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 414 SGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
+G +++ +K+M ++P + + L+ G A + +A +++K M
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDM 733
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/359 (18%), Positives = 152/359 (42%), Gaps = 53/359 (14%)
Query: 262 KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRR 321
K SL+++ ++T + + + L ++EK+ ++PD I +++ A + L +
Sbjct: 351 KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 410
Query: 322 IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKM-------------------- 361
I E ++ +P N+LI Y + G LE++ ++ D M
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 362 --------------KFR------DVASWTSLISAYGMTGQGCNAL-ALFSEMQNSGISPD 400
K + DV ++ +L AY G C A + M ++ + P+
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPN 530
Query: 401 HIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVD---EAY 457
I++ G +EE +F +M + + P + F L+ +D E
Sbjct: 531 VRTCGTIVNGYCEEGKMEEALRFFYRMK-ELGVHPNLFVFNSLIKGFLNINDMDGVGEVV 589
Query: 458 DVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ--LSPEQSGYYVLLSNIYAK 515
D++++ ++P+ + TL+++ +M ++L+ + P+ + +L YA+
Sbjct: 590 DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG-YAR 648
Query: 516 AGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVG 574
AG ++ ++ + M++ +R NV + +Q+ + ++ ++Y+++ +VG
Sbjct: 649 AGEPEKAEQILNQMRKFGVR-----PNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 224/516 (43%), Gaps = 62/516 (12%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E ++V + ++ Y + + +DA+ + +MV G+RPD T+ ++ + +
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYA 208
L M++ NL +++ K G A +L++M DVV +N+++
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLV 266
+ DDAL + +EM+ G +P+ T +SL+ + + SD + D+ +LV
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
++N +I ++K A LY M K ++PD T
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT------------------------ 367
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISAYGMTGQG 382
NSL++ + L+ A+++F+ M F DV ++ +LI + + +
Sbjct: 368 -----------YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 416
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
+ LF EM + G+ D + + ++ H G + + FKQM D + P I ++
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSI 475
Query: 443 LVDLLGRAGRVDEA---YDVIKQMPLEPNERVWGTLLSSCRVYSNMDIG--LLAADNLLQ 497
L+D L G++++A +D +++ ++ + ++ T++ +D G L + +L
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 498 LSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDT 557
+ P Y ++S + +K + + E +L+K+ + P ++ N+ + L D
Sbjct: 536 VKPNVVTYNTMISGLCSK----RLLQEAYALLKKMK-EDGPLPNSGTYNTLIRAHLR-DG 589
Query: 558 SHPQSKEIYEELYV--LVGKMKELGYVPETDSALHD 591
S E+ E+ VG +G V + LHD
Sbjct: 590 DKAASAELIREMRSCRFVGDASTIGLVA---NMLHD 622
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 119/558 (21%), Positives = 239/558 (42%), Gaps = 64/558 (11%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
Y ++R+ +++ +DA+ +F MV P + +L A + + L M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFD 214
++ + L+ N LI+ + + + A +L +M + +V+ +S++ GY R
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAV--TNTSSDNVLYV------------------- 253
DA+ + +M ++G +PD T +L+ + N +S+ V V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 254 --------KDIFINLEKK--------SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
D+ +NL K +V +N +I K +A++L+ +ME +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
P+ +T +S++ ++ + KK+ PNL+ N+LID + + G +A+K+
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 358 FDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
+D M R D+ ++ SL++ + M + A +F M + PD + + ++
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 414 SGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNER 470
S +E+G F++M+ + + + L+ L G D A V KQM + P+
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 471 VWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNI--YAKAGRWKEVTEVRSL 528
+ LL ++ L D +Q S + Y+ + I KAG+ + ++
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 529 MKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELGYVPETDSA 588
+ + ++ P + V N+ + S SK + +E Y L+ KMKE G +P + +
Sbjct: 531 LSLKGVK--PNV--VTYNTMI--------SGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 589 LHDVEEEDKEGHLAVHSE 606
+ ++G A +E
Sbjct: 579 NTLIRAHLRDGDKAASAE 596
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 220/496 (44%), Gaps = 68/496 (13%)
Query: 100 NVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
+++ V + + + VF ++ FRP + Y ++A ++ GL+L M
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207
Query: 160 VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYA------- 208
R+ ++F+ N LI K + +A + DEM R ++++N+++ GY
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267
Query: 209 -----QNMRFD-----------------------DALEVCREMDDLGQKPDAGTMASLMP 240
+ M+ D DA V +EM DLG PDA T + L
Sbjct: 268 SFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFD 327
Query: 241 AV-TNTSSDNVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAID-LYLQMEKSEVE 297
+N ++ L V + ++ K + + ++++ K A + L +M K V
Sbjct: 328 GYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 298 PDAITCASVLPAC--GDLSALLLGRRIH-EYVERKKLRPNLLLENSLIDMYARCGCLEDA 354
+ I + C GD L+G R+ E +E++ ++P+ L N LI + G +E+A
Sbjct: 388 NEVIYNTMIDGYCRKGD----LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENA 443
Query: 355 QKVFDKMKFRDVA----SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSA 410
+K +KMK + V+ ++ LI YG + + EM+++G P+ +++ +++
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 411 -CSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLE 466
C S LLE V K+ +D ++P++ + L+D G++++A+ K+M +E
Sbjct: 504 LCKGSKLLEAQIV--KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIE 561
Query: 467 PNERVWGTLLSSCRVYSNMDIGLLAADNLLQLS-----PEQSGYYVLLSNIYAKAGRWKE 521
N + TL+ + + A D LL++S P+ Y L+S Y AG +
Sbjct: 562 LNLVTYNTLIDGLSMTGKLS---EAEDLLLEISRKGLKPDVFTYNSLISG-YGFAGNVQR 617
Query: 522 VTEVRSLMKRRRIRKT 537
+ MKR I+ T
Sbjct: 618 CIALYEEMKRSGIKPT 633
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 190/447 (42%), Gaps = 64/447 (14%)
Query: 71 LMRAYAACGEPGTARKVFDEIS----ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ Y G P + KV + + E +++ +N +++ DA V +EM + G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
F PD +T+ + S ++ L ++ + + N + + L++ K G + +A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 187 YVLD-EMPRRDV---VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASL---- 238
+L EM + V V +N+M+ GY + A M+ G KPD L
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 239 --MPAVTNTSSD-NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSE 295
+ + N + N + +K + ++E ++N++I Y + D+ +ME +
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVE-----TYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 296 VEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRP---------------------- 333
P+ ++ +++ S LL + + +E + + P
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 334 -------------NLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAY 376
NL+ N+LID + G L +A+ + ++ + DV ++ SLIS Y
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 377 GMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPR 436
G G +AL+ EM+ SGI P + ++S C+ G +E + F +M+ + P
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS----LKPD 664
Query: 437 IEHFACLVDLLGRAGRVDEAYDVIKQM 463
+ + ++ G +++A+++ KQM
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 93/216 (43%), Gaps = 9/216 (4%)
Query: 238 LMPAVTNTSSDNVLYVKDIFINLEKKSLV----SWNVMITVYMKNSMPGNAIDLYLQMEK 293
L+ +V S + D+F L + + S +++ +K I+++L + +
Sbjct: 113 LLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILE 172
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLED 353
S+ P + A LS + G + ++ ++ P++ + N LID + + D
Sbjct: 173 SDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND 232
Query: 354 AQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILS 409
A+++FD+M R + ++ +LI Y G + + M+ I P I F +L
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 410 ACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVD 445
+G++E+ + K+M D P F+ L D
Sbjct: 293 GLFKAGMVEDAENVLKEMK-DLGFVPDAFTFSILFD 327
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 188/417 (45%), Gaps = 23/417 (5%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNV----VFYNVMIRSYVNNRWYNDALLVFREMVN-G 125
+M+ Y G+ A ++ +++ E V NV++ + DAL +EM N
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEA 185
GF PD YT+ ++ + +++ +++ ML+ D +++ N +IS K G + EA
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 186 RYVLDEMPRRD----VVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPA 241
VLD+M RD V++N++++ + + ++A E+ R + G PD T SL+
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 242 VTNTSSDNVLYVKDIFINLEKKSL----VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
+ T + V ++F + K ++N++I A+++ QME S
Sbjct: 410 LCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
IT +++ + I + +E + N + N+LID + +EDA ++
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 358 FDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
D+M D ++ SL++ + G A + M ++G PD + + ++S
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 414 SGLLEEGKVYFKQMT-DDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPNE 469
+G +E + + +TP + ++ L R + EA ++ ++M LE NE
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFREM-LEQNE 641
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 168/403 (41%), Gaps = 27/403 (6%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
+V +NV+I++ A+L+ +M + G PD T+ V++ +L L++
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR-----DVVSWNSMVAGYAQ 209
M++ W+ N ++ + K G + +A + EM + D ++N++V G +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 210 NMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-DNVLYVKDIFINLE-KKSLVS 267
A+E+ M G PD T S++ + + V D I + + V+
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 268 WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVE 327
+N +I+ K + A +L + + PD T S++ + + E +
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 328 RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF----RDVASWTSLISAYGMTGQGC 383
K P+ N LID G L++A + +M+ R V ++ +LI + +
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMT------DDYRITPRI 437
A +F EM+ G+S + + + ++ S +E+ QM D Y +
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 438 EHFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVWGTLLS 477
HF R G + +A D+++ M EP+ +GTL+S
Sbjct: 548 THFC-------RGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 172/375 (45%), Gaps = 16/375 (4%)
Query: 71 LMRAYAACGEPGTARKVFDEISERN----VVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+R + CGE + +FDE+ ER + YN +IR + +A +F M+ G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
RP+ YTY ++ + LQL M++ + N N +I+ K G + +A
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 187 YVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREM--DDLGQKPDAGTMASLMP 240
+++ M +R D +++N ++ G D+A ++ M D PD + +L+
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 241 AVTNTSS-DNVLYVKDIFI-NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEP 298
+ + L + D+ + L V+ N+++ +K A++L+ Q+ S++
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 299 DAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVF 358
++ T +++ L + + + + +L+P++ N L+ + G L+ A ++F
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 359 DKMK----FRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHS 414
++M+ F DV S+ +I G +A +L M +G+SPD + +++
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKL 612
Query: 415 GLLEEGKVYFKQMTD 429
G L+E +F +M D
Sbjct: 613 GYLDEAISFFDKMVD 627
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/515 (20%), Positives = 214/515 (41%), Gaps = 64/515 (12%)
Query: 11 KLQALVSSFQKSLASFQSPVIAVE-LLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGI 69
+L+ VS FQ+++ S S A L+ K + +A + + K++ ++ N
Sbjct: 53 QLKNAVSVFQQAVDSGSSLAFAGNNLMAKLVRSRNHELAF-SFYRKMLETDTFINFVSLS 111
Query: 70 KLMRAYAACGEPGTARKVFDEISERNVVF----YNVMIRSYVNNRWYNDALLVFREMVNG 125
L+ Y + G A V + +R F +N++++ N A+ + REM
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 126 GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNL------------------- 166
PD ++Y V++ L L+L M W+L
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 167 --------FVG--------NGLISMYGKCGCLLEARYVLDEMPRRD----VVSWNSMVAG 206
F+G LI + CG L + + DE+ R +++N+++ G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 207 YAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS-SDNVLYVKDIFINL-EKKS 264
+ + + +A E+ M + G +P+ T L+ + + L + ++ I E+ +
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 265 LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLP---ACGDLSA----LL 317
V++N++I K+ + +A+++ M+K PD IT +L A GDL L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFD----KMKFRDVASWTSLI 373
L + Y + P+++ N+LI + L A ++D K+ D + L+
Sbjct: 412 LMLKDSSYTD-----PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
++ G A+ L+ ++ +S I + + A++ +G+L K +M +
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS-EL 525
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLEPN 468
P + + CL+ L + G +D+A+ + ++M + N
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNN 560
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 169/413 (40%), Gaps = 63/413 (15%)
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N+++ +N G A+ L +M ++ + PD + +V+ + L + ++
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKF----RDVASWTSLISAYGMTGQGCN 384
+L+ LID + + G +++A +MKF D+ +TSLI + G+
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
ALF E+ G SP I + ++ G L+E F+ M + + P + + L+
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE-RGVRPNVYTYTGLI 324
Query: 445 DLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSG 504
D L G+ EA ++ M +E +E P
Sbjct: 325 DGLCGVGKTKEALQLLNLM-IEKDEE-----------------------------PNAVT 354
Query: 505 YYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKE 564
Y +++ N K G + E+ LMK+RR R N + L G + E
Sbjct: 355 YNIII-NKLCKDGLVADAVEIVELMKKRRTRPD--------NITYNILLGGLCAKGDLDE 405
Query: 565 IYEELYVLVGKMKELGY----VPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHES 620
+ LY++ +K+ Y V ++ +H + +E++ +H + L I L+ +
Sbjct: 406 ASKLLYLM---LKDSSYTDPDVISYNALIHGLCKENR-----LH-QALDIYDLLVEKLGA 456
Query: 621 PIRITKNLRV-----CGDCHIAAKLISKIVGREIVIRDTNRFHHFKDGLCSCG 668
R+T N+ + GD + A +L +I +IV R+++ + DG C G
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV-RNSDTYTAMIDGFCKTG 508
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 166/362 (45%), Gaps = 12/362 (3%)
Query: 114 DALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLI 173
D V++EM+ +P+ +T+ V+ A + + + M N+ N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 174 SMY---GKCGCLLEARYVLDEMPRRDV----VSWNSMVAGYAQNMRFDDALEVCREMDDL 226
Y G G + +A VL EM DV ++N ++ G+ ++ +++V +EM D
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 227 GQKPDAGTMASLMPAVTNTSS-DNVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNA 284
KP+ + SL+ + N + ++D ++ + +L+++N +I + KN M A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 285 IDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDM 344
+D++ ++ P ++ A L + G + E +ER+ + P++ N LI
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 345 YARCGCLEDAQKVFDKMKFR---DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDH 401
R G +E A+K+FD++ + D+ ++ L+ Y G+ A L EM G+ P H
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 402 IAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIK 461
+ + ++ G L+ QM + R+ + + L+ + G++++A ++
Sbjct: 506 LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLN 565
Query: 462 QM 463
+M
Sbjct: 566 EM 567
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 193/474 (40%), Gaps = 77/474 (16%)
Query: 196 DVVSWNSMVA-----GYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV--TNTSSD 248
D V NS++A YA N RF+ E + G K A + LM A+ N S+D
Sbjct: 147 DNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD 206
Query: 249 NVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLP 308
K++ + ++ ++NV+I K A D+ M+ P+ ++ +++
Sbjct: 207 VEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID 266
Query: 309 A-C---GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR 364
C G+ + E VE + PNL N LID + + L + KVF +M +
Sbjct: 267 GYCKLGGNGKMYKADAVLKEMVEN-DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 365 DVA----SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEE- 419
DV S+ SLI+ G+ A+++ +M ++G+ P+ I + A+++ + +L+E
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 420 -----------------------------GKV----YFKQMTDDYRITPRIEHFACLVDL 446
GK+ K+ + I P + + CL+
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 447 LGRAGRVDEAYDVIKQMPLE--PNERVWGTLLSS-CRVYSNMDIGLLAAD-NLLQLSPEQ 502
L R G ++ A + Q+ + P+ + L+ CR + +L + + + L P
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 503 SGYYVLLSNIYAKAGRWKEVTEVRSLM-KRRRIRKTPGISNVELNSQVHTFLAGDTSHPQ 561
Y +++ Y K G K T +R+ M K RR+R NV L
Sbjct: 506 LTYNIVMKG-YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY------------S 552
Query: 562 SKEIYEELYVLVGKMKELGYVPETDSALHDVEEE--------DKEGHLAVHSEK 607
K E+ +L+ +M E G VP + V+EE D EGHL S K
Sbjct: 553 QKGKLEDANMLLNEMLEKGLVPNRIT-YEIVKEEMVDQGFVPDIEGHLFNVSTK 605
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 135/308 (43%), Gaps = 21/308 (6%)
Query: 71 LMRAYAACGEPGTARK---VFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMV 123
L+ Y G G K V E+ E N+ +N++I + + ++ VF+EM+
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 124 NGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
+ +P+ +Y ++ + + + M+ + NL N LI+ + K L
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 184 EARYVLDEMPRRDVVS----WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
EA + + + V +N ++ Y + + DD + EM+ G PD GT L+
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 240 PAVTNTSSDNVLYVKDIFINLEKKS---LVSWNVMITVYMKNSMPGNAIDLYLQMEKSEV 296
+ N+ K +F L K LV++++++ Y + A L +M K +
Sbjct: 444 AGLCRNG--NIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 297 EPDAITCASVLPA-C--GDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLED 353
+P +T V+ C G+L A R E + ++LR N+ N L+ Y++ G LED
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQME--KERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 354 AQKVFDKM 361
A + ++M
Sbjct: 560 ANMLLNEM 567
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 156/356 (43%), Gaps = 27/356 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEIS----ERNVVFYNVMIRSYV----NNRWYNDALLVFREM 122
++ A G+ AR V +++ NVV YN +I Y N + Y A V +EM
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK-ADAVLKEM 287
Query: 123 VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCL 182
V P+ T+ ++ DNL +++ ML + N+ N LI+ G +
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347
Query: 183 LEARYVLDEMP----RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASL 238
EA + D+M + +++++N+++ G+ +N +AL++ + G P L
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
Query: 239 MPAVTNTSS-DNVLYVKDIFINLEKKSLV----SWNVMITVYMKNSMPGNAIDLYLQMEK 293
+ A D+ +K+ +E++ +V ++N +I +N A L+ Q+
Sbjct: 408 IDAYCKLGKIDDGFALKE---EMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT- 463
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLED 353
S+ PD +T ++ + + + + L+P L N ++ Y + G L+
Sbjct: 464 SKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKA 523
Query: 354 AQKVFDKMKFR-----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAF 404
A + +M+ +VAS+ L+ Y G+ +A L +EM G+ P+ I +
Sbjct: 524 ATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/538 (21%), Positives = 219/538 (40%), Gaps = 97/538 (18%)
Query: 67 LGIKLMRAYAACGEPGTARKVFDEIS----ERNVVFYNVMIRSYVNNRWYNDALLVFREM 122
L L+R +A G +A + DE+ + ++V YNV I S+ + A F E+
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264
Query: 123 VNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCL 182
G +PD TY ++ ++ L +++ + K R + N +I YG G
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324
Query: 183 LEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASL 238
EA +L+ + V+++N ++ + + D+AL+V EM P+ T L
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNIL 383
Query: 239 MPAVTNTSS-DNVLYVKDIFINLEKKSLV----SWNVMITVYMKNSMPGNAIDLYLQMEK 293
+ + D ++D +++K L + N+M+ K+ A ++ +M+
Sbjct: 384 IDMLCRAGKLDTAFELRD---SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 294 SEVEPDAITCASVLPACGDL-------------------------SALLL---------- 318
PD IT S++ G + ++L+
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 319 GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLIS 374
G +I++ + + P+L L N+ +D + G E + +F+++K R D S++ LI
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 375 A--------------YGMTGQGC---------------------NALALFSEMQNSGISP 399
Y M QGC A L EM+ G P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
+ + +++ + L+E + F++ RI + ++ L+D G+ GR+DEAY +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 460 IK---QMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNL--LQLSPEQSGYYVLLSNI 512
++ Q L PN W +LL + ++ L+ ++ L+ +P Q Y +L++ +
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGL 737
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 148/378 (39%), Gaps = 51/378 (13%)
Query: 62 HENPSLGIKLMRAYAAC----GEPGTARKVFDEISERNVV----FYNVMIRSYVNNRWYN 113
++N S ++L+ Y C GEP R +F+EI R V Y+++I + + N
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 114 DALLVFREMVNGGFRPDNYTYPCVLKA-CSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGL 172
+ +F M G D Y V+ C C + QL M + + +
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCG-KVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 173 ISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQ 228
I K L EA + +E + +VV ++S++ G+ + R D+A + E+ G
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 229 KPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLY 288
P+ L +WN ++ +K A+ +
Sbjct: 689 TPN---------------------------------LYTWNSLLDALVKAEEINEALVCF 715
Query: 289 LQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARC 348
M++ + P+ +T ++ + + ++++ ++P+ + ++I A+
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 349 GCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAF 404
G + +A +FD+ K D A + ++I + +A +LF E + G+ +
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTC 835
Query: 405 VAILSACSHSGLLEEGKV 422
V +L + LE+ +
Sbjct: 836 VVLLDTLHKNDCLEQAAI 853
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 159/374 (42%), Gaps = 15/374 (4%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
NV N+M+ ++ ++A +F EM PD T+ ++ + +++
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFD 214
ML N V LI + G + + +M ++ ++ Y M
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 215 DALEVCREM-DDLGQK---PDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLV---- 266
E R M +++ + PDA + + L+ + N Y ++F +++++ V
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY--ELFYSMKEQGCVLDTR 588
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
++N++I + K A L +M+ EP +T SV+ + L + E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQG 382
+ K++ N+++ +SLID + + G +++A + +++ + ++ +W SL+ A +
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
AL F M+ +P+ + + +++ + V++++M + P +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ-GMKPSTISYTT 767
Query: 443 LVDLLGRAGRVDEA 456
++ L +AG + EA
Sbjct: 768 MISGLAKAGNIAEA 781
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 144/351 (41%), Gaps = 56/351 (15%)
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM------------------- 239
S+NS++ A+ FD ++ EM G P T ++
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 240 ------PAVTNTS-----------SDNVLYVKDIFINLEKKSLVS-WNVMITVYMKNSMP 281
PA + + SD +L + L + V + +I + K
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 282 GNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSL 341
+A+ L +M+ S ++ D + + + G + + + + +E L+P+ + S+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 342 IDMYARCGCLEDAQKVFDKM-KFRDVA---SWTSLISAYGMTGQGCNALALFSEMQNSGI 397
I + + L++A ++F+ + K R V ++ ++I YG G+ A +L + G
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 398 SPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAY 457
P IA+ IL+ G ++E F++M D P + + L+D+L RAG++D A+
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD--AAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 458 ---DVIKQMPLEPNERVWGTLL----------SSCRVYSNMDIGLLAADNL 495
D +++ L PN R ++ +C ++ MD + D +
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEI 448
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALAL 388
P + L +LI +A+ G ++ A + D+MK D+ + I ++G G+ A
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
F E++ +G+ PD + + +++ + L+E F+ + + R+ P + ++ G
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAYNTMIMGYG 319
Query: 449 RAGRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGY 505
AG+ DEAY ++++ + P+ + +L+ R +D L + + + +
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST 379
Query: 506 YVLLSNIYAKAGRWKEVTEVRSLMKR 531
Y +L ++ +AG+ E+R M++
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQK 405
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 196/460 (42%), Gaps = 15/460 (3%)
Query: 84 ARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSC 143
++V D N+ YN +I S R +++A L+F M G RP++ TY ++
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 144 SDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRD----VVS 199
L L G M+ L +++ N LI+ + K G + A + EM + VV+
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 200 WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIF 257
+ S++ GY + + AL + EM G P T +L+ + D V ++
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 258 INLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALL 317
K + V++NVMI Y + A + +M + + PD + ++
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 318 LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLI 373
+ + + + N + L+ + R G LE+A V +M R D+ + LI
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 374 SAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRI 433
L EM + G+ PD + + +++ A S +G +E + M ++ +
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQM-PLE--PNERVWGTLLSS-CRVYSNMDIGL 489
+ + A +++ L +AG V+EA + +M P+ PN+ +G L + +M +
Sbjct: 715 PNEVTYTA-VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAV 773
Query: 490 LAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLM 529
+ +L+ + Y +L + + GR +E +E+ + M
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRM 813
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 169/379 (44%), Gaps = 21/379 (5%)
Query: 100 NVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
+ ++ V R + A+ +F +MV+ G RPD Y Y V+++ +L ++ M
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 160 VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDD 215
D N+ N LI K + EA + ++ + DVV++ ++V G + F+
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 216 ALEVCREMDDLGQKPDAGTMASLMPAVTNTSS--DNVLYVKDIFINLEKKSLVSWNVMIT 273
LE+ EM L P ++SL+ + + + VK + +L +N +I
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 274 VYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA-C--GDLSALL--LGRRIHEYVER 328
K A L+ +M K + P+ +T + ++ C G L L LG +
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD----- 430
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRD----VASWTSLISAYGMTGQGCN 384
L+ ++ NSLI+ + + G + A+ +M + V ++TSL+ Y G+
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
AL L+ EM GI+P F +LS +GL+ + F +M ++ + P + ++
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMI 549
Query: 445 DLLGRAGRVDEAYDVIKQM 463
+ G + +A++ +K+M
Sbjct: 550 EGYCEEGDMSKAFEFLKEM 568
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 189/450 (42%), Gaps = 17/450 (3%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
N+V YNV+I + +A+ + +++ +PD TY ++ GL++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEA----RYVLDEMPRRDVVSWNSMVAGYAQN 210
ML +R + + L+ K G + EA + V+D ++ +N+++ +
Sbjct: 321 DEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKG 380
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-DNVL-YVKDIFINLEKKSLVSW 268
+F +A + M +G +P+ T + L+ D L ++ ++ K S+ +
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVER 328
N +I + K A +M ++EP +T S++ + R++ +
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 329 KKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV----ASWTSLISAYGMTGQGCN 384
K + P++ +L+ R G + DA K+F++M +V ++ +I Y G
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 385 ALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLV 444
A EM GI PD ++ ++ +G E KV+ + I + L+
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI-CYTGLL 619
Query: 445 DLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYSNMDI--GLLAADNLLQLS 499
R G+++EA V ++M ++ + +G L+ + + + GLL + L
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLK 679
Query: 500 PEQSGYYVLLSNIYAKAGRWKEVTEVRSLM 529
P+ Y ++ + +K G +KE + LM
Sbjct: 680 PDDVIYTSMI-DAKSKTGDFKEAFGIWDLM 708
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 156/414 (37%), Gaps = 57/414 (13%)
Query: 84 ARKVFDEISERNV----VFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTY-PCVL 138
A K+F+E++E NV V YNVMI Y + A +EM G PD Y+Y P +
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 139 KAC---SCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR 195
C S+ F LH K + N GL+ + + G L EA V EM +R
Sbjct: 586 GLCLTGQASEAKVFVDGLH----KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 196 ----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-DNV 250
D+V + ++ G ++ + +EM D G KPD S++ A + T
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 251 LYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA 309
+ D+ IN + V++ +I K A L +M+ P+ +T L
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD- 760
Query: 310 CGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASW 369
+L +DM + K + A++
Sbjct: 761 --------------------------ILTKGEVDMQKAV----ELHNAILKGLLANTATY 790
Query: 370 TSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
LI + G+ A L + M G+SPD I + +++ +++ + MT+
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 430 DYRITPRIE-----HFACLVDLLGRAGRVDEAYDVIKQMPLEPNERVWGTLLSS 478
R+ H C+ G G+ E + + + L PN + T S+
Sbjct: 851 KGIRPDRVAYNTLIHGCCVA---GEMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 205/483 (42%), Gaps = 50/483 (10%)
Query: 86 KVFDEISE----RNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKAC 141
+VFDE+ R+V Y +I +Y N Y +L + M N P TY V+ AC
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 142 SCSDNLRFGLQLHG------AMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR 195
+ R GL G M + ++ N L+S G EA V M
Sbjct: 222 A-----RGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDG 276
Query: 196 ----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVL 251
D+ +++ +V + + R + ++ EM G PD + L+ A + S +
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGS--IK 334
Query: 252 YVKDIFINLEKKSLV----SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVL 307
+F ++ +++V++ ++ ++ + L+L+M+ S +PDA T ++
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Query: 308 PACGDLSALL-LGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDV 366
G+ + H+ VE + + P++ +I + G EDA+K+ M D+
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVE-ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDI 453
Query: 367 A----SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKV 422
++T +I A+G AL F+ M G +P F ++L + + GL++E +
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 423 YFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA---YDVIKQMPLEPNERVWGTLLSSC 479
++ D I + F ++ + G+ +EA Y +++ +P+ER +LS
Sbjct: 514 ILSRLVDS-GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS-- 570
Query: 480 RVYS--------NMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKR 531
VYS + A ++L P Y ++L+ +Y K RW +V E+ M
Sbjct: 571 -VYSFARLVDECREQFEEMKASDIL---PSIMCYCMMLA-VYGKTERWDDVNELLEEMLS 625
Query: 532 RRI 534
R+
Sbjct: 626 NRV 628
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 79/339 (23%)
Query: 321 RIHEYVERKKL-RPNLLLENSLIDMYARCGCLEDAQKVFDKMKF----RDVASWTSLISA 375
R+ +Y++R+ +PN + +I + R G L+ +VFD+M R V S+T+LI+A
Sbjct: 126 RLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINA 185
Query: 376 YGMTGQ----------------------------GC--------NALALFSEMQNSGISP 399
YG G+ C L LF+EM++ GI P
Sbjct: 186 YGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQP 245
Query: 400 DHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDV 459
D + + +LSAC+ GL +E ++ F+ M D I P + ++ LV+ G+ R+++ D+
Sbjct: 246 DIVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 460 IKQMPLE---PNERVWGTLLSSCRVYSNMD--IGLLAADNLLQLSPEQSGYYVLLSNIYA 514
+ +M P+ + LL + ++ +G+ +P + Y VLL N++
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL-NLFG 363
Query: 515 KAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVG 574
++GR+ +V ++ MK SN + ++ + +L+
Sbjct: 364 QSGRYDDVRQLFLEMKS---------SNTDPDAATYN-------------------ILIE 395
Query: 575 KMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFA 613
E GY E + HD+ EE+ E + + I+FA
Sbjct: 396 VFGEGGYFKEVVTLFHDMVEENIEPDMETYE---GIIFA 431
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 130/301 (43%), Gaps = 10/301 (3%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ AYA G A VF ++ N Y+V++ + + Y+D +F EM +
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
PD TY +++ + + L M++ ++ ++ G+I GK G +AR
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 187 YVLDEMPRRDVV----SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
+L M D+V ++ ++ + Q +++AL M ++G P T SL+ +
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 243 TNTS--SDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
++ + + + ++ ++N I Y + A+ Y+ MEKS +PD
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
T +VL + R E ++ + P+++ ++ +Y + +D ++ ++
Sbjct: 563 RTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Query: 361 M 361
M
Sbjct: 623 M 623
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 145/674 (21%), Positives = 276/674 (40%), Gaps = 76/674 (11%)
Query: 13 QALVSSFQKSLASFQSPVIAVELLGKALDQYPDIIALKNVHTKLIYLNSHENPSLGIKLM 72
+ ++ F+ SL ++ S ++ LGK D + LK + T L N +
Sbjct: 213 RMILEGFRPSLQTYSSLMVG---LGKRRDIDSVMGLLKEMET----LGLKPNVYTFTICI 265
Query: 73 RAYAACGEPGTARKVF----DEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFR 128
R G+ A ++ DE +VV Y V+I + R + A VF +M G +
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHK 325
Query: 129 PDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYV 188
PD TY +L S + +L Q M K ++ L+ K G EA
Sbjct: 326 PDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDT 385
Query: 189 LDEMPRRDVV----SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGT---------- 234
LD M + ++ ++N+++ G + R DDALE+ M+ LG KP A T
Sbjct: 386 LDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGK 445
Query: 235 -------MASLMPAVTNTSSDNV------LY----------VKDIFINLEKKSL----VS 267
+ + T + N+ LY K IF L+ L V+
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 268 WNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVE 327
+N+M+ Y K AI L +M ++ EPD I S++ + ++ ++
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 328 RKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGC 383
KL+P ++ N+L+ + G +++A ++F+ M + + ++ +L +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 384 NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACL 443
AL + +M + G PD + I+ +G ++E +F QM + P L
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK--LVYPDFVTLCTL 683
Query: 444 VDLLGRAGRVDEAYDVIKQMPL----EPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLS 499
+ + +A +++AY +I +P W L+ S + +D + ++ L+
Sbjct: 684 LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANG 743
Query: 500 PEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSH 559
+ G +L+ I + + V+ R+L + + K G V+ + L G
Sbjct: 744 ICRDGDSILVP-IIRYSCKHNNVSGARTLFE--KFTKDLG---VQPKLPTYNLLIGGLLE 797
Query: 560 PQSKEIYEELYVLVGKMKELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLNTHE 619
EI +++++ ++K G +P+ + ++ K G + ++L ++ ++THE
Sbjct: 798 ADMIEIAQDVFL---QVKSTGCIPDVATYNFLLDAYGKSGKI----DELFELYKEMSTHE 850
Query: 620 SPIR-ITKNLRVCG 632
IT N+ + G
Sbjct: 851 CEANTITHNIVISG 864
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 10/288 (3%)
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLY--VKDI 256
++N ++ G + + A +V ++ G PD T L+ A + + L+ K++
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 257 FINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQ-MEKSEVEPDAITCASVLPACGDLSA 315
+ + + ++ N++I+ +K +A+DLY M + P A T ++
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 316 LLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTS 371
L +++ E + RPN + N LI+ + + G + A +F +M D+ +++
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 372 LISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDY 431
L+ M G+ L F E++ SG++PD + + I++ S LEE V F +M
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 432 RITPRIEHFACLVDLLGRAGRVDEA---YDVIKQMPLEPNERVWGTLL 476
ITP + + L+ LG AG V+EA Y+ I++ LEPN + L+
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 205/503 (40%), Gaps = 60/503 (11%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
N YN +I + +R+ +A+ V+R M+ GFRP TY ++ ++ + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVL----DEMPRRDVVSWNSMVAGYAQN 210
M + L N++ I + G+ G + EA +L DE DVV++ ++
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNV 270
+ D A EV +M KPD T +L+ + SDN +D+
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLL----DRFSDN----RDL-------------- 344
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
+ + +MEK PD +T ++ A + + +
Sbjct: 345 -----------DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVA----SWTSLISAYGMTGQGCNAL 386
+ PNL N+LI R L+DA ++F M+ V ++ I YG +G +AL
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDL 446
F +M+ GI+P+ +A A L + + +G E K F + D + P + ++
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK-DIGLVPDSVTYNMMMKC 512
Query: 447 LGRAGRVDEAYDVIKQM---PLEPNERVWGTLLSSCRVYSNMDIG--LLAADNLLQLSPE 501
+ G +DEA ++ +M EP+ V +L+++ +D + ++L P
Sbjct: 513 YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPT 572
Query: 502 QSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQ 561
Y LL+ + K G+ +E E+ M ++K + + N+ D
Sbjct: 573 VVTYNTLLAGL-GKNGKIQEAIELFEGM----VQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 562 SKEIYEELYVLVGKMKELGYVPE 584
K ++ KM ++G VP+
Sbjct: 628 LKMLF--------KMMDMGCVPD 642
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 128/278 (46%), Gaps = 28/278 (10%)
Query: 170 NGLISMYGKCGCLLEARYVLDEMPRRD----VVSWNSMVAGYAQNMRFDDALEVCRE-MD 224
N L+ YGK G + E + EM + ++ N +++G + DDAL++ + M
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 225 DLGQKPDAGTMASLMPAVTNTSSDNVLY-VKDIFINLE----KKSLVSWNVMITVYMKNS 279
D P A T P + S LY K +F + + + +N++I + K
Sbjct: 884 DRDFSPTACTYG---PLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 280 MPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGR---RIHEYVERKK--LRPN 334
A L+ +M K V PD T SVL C ++GR +H + E K+ L P+
Sbjct: 941 EADAACALFKRMVKEGVRPDLKT-YSVLVDC----LCMVGRVDEGLHYFKELKESGLNPD 995
Query: 335 LLLENSLIDMYARCGCLEDAQKVFDKMKFR-----DVASWTSLISAYGMTGQGCNALALF 389
++ N +I+ + LE+A +F++MK D+ ++ SLI G+ G A ++
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 390 SEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQM 427
+E+Q +G+ P+ F A++ S SG E ++ M
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 108/547 (19%), Positives = 221/547 (40%), Gaps = 68/547 (12%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
VV YN ++ N +A+ +F MV G P+ T+ + +D + L++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPR---RDVVSWNSMVAGYAQNM 211
M+ + ++F N +I K G + EA +M + D V+ +++ G +
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 212 RFDDALEVCRE-MDDLGQKP--------------DAGTMAS------------------- 237
+DA ++ + + +P +AG +
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 751
Query: 238 LMPAVT-NTSSDNVLYVKDIFINLEKK-----SLVSWNVMITVYMKNSMPGNAIDLYLQM 291
L+P + + +NV + +F K L ++N++I ++ M A D++LQ+
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 292 EKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCL 351
+ + PD T +L A G + +++ + + N + N +I + G +
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 352 EDAQKV-FDKMKFRDVA----SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVA 406
+DA + +D M RD + ++ LI +G+ A LF M + G P+ +
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 407 ILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEA---YDVIKQM 463
+++ +G + FK+M + + P ++ ++ LVD L GRVDE + +K+
Sbjct: 932 LINGFGKAGEADAACALFKRMVKE-GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 464 PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQ---LSPEQSGYYVLLSNIYAKAGRWK 520
L P+ + +++ ++ L+ + + ++P+ Y L+ N+ AG +
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL-GIAGMVE 1049
Query: 521 EVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELG 580
E ++ + ++R L V TF A + S + E Y + M G
Sbjct: 1050 EAGKIYNEIQR-----------AGLEPNVFTFNALIRGYSLSGKP-EHAYAVYQTMVTGG 1097
Query: 581 YVPETDS 587
+ P T +
Sbjct: 1098 FSPNTGT 1104
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 175/391 (44%), Gaps = 15/391 (3%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
YN ++ S ++ V+ EM+ P+ YTY ++ N+ Q ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYAQNMRFD 214
+ LD + F LI Y + L A V +EMP RR+ V++ ++ G R D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVTNT--SSDNVLYVKDIFINLEKKSLVSWNVMI 272
+A+++ +M D P T L+ ++ + S+ + VK++ K ++ ++ V+I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 273 TVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLR 332
A +L QM + + P+ IT +++ + + E +E +KL
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 333 PNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALAL 388
PN N LI Y + + A V +KM R DV ++ SLI +G +A L
Sbjct: 426 PNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 389 FSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLG 448
S M + G+ PD + +++ + S +EE F + + + P + + L+D
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYC 543
Query: 449 RAGRVDEAYDVIKQMPLE---PNERVWGTLL 476
+AG+VDEA+ ++++M + PN + L+
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/536 (22%), Positives = 219/536 (40%), Gaps = 106/536 (19%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
Y V+I+S + ++AL + +EM G +P+ +TY ++ + +L G ML
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 159 KVRLDWNLFVGNGLISMYGKCGC---------LLEARY---------------------- 187
+ L N+ N LI+ Y K G L+E+R
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHK 445
Query: 188 ---VLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
VL++M R DVV++NS++ G ++ FD A + M+D G PD T S++
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 241 AVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAID-LYLQMEK---SEV 296
++ S V D+F +LE+K + VM T + +D +L +EK
Sbjct: 506 SLCK--SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 297 EPDAITCASVLPA-CGD---LSALLLGRRI--------------------------HEYV 326
P+++T +++ C D A LL ++ H Y
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 327 ERKKL-----RPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYG 377
+++ +P+ + I Y R G L DA+ + KM+ D+ +++SLI YG
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 378 MTGQGCNALALFSEMQNSGISPDHIAFVAIL----------------SACSHSGLLE-EG 420
GQ A + M+++G P F++++ C+ S ++E +
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 421 KVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP----LEPNERVWGTLL 476
V + ++ +TP + + L+ + G + A V M + P+E V+ LL
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 477 SSCRVYSNMDIGLLAADNLLQLS--PEQSGYYVLLSNIYAKAGRWKEVTEVRSLMK 530
S C + D+++ + P+ VL+ +Y K + + + ++L++
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 170/425 (40%), Gaps = 84/425 (19%)
Query: 69 IKLMRAYAACGEPGTARKVFDEISERNVV----FYNVMIRSYVNNRWYNDALLVFREMVN 124
+ ++ A A G A +F+E+ + + YN +++ YV DA + EM
Sbjct: 308 VSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK 367
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLE 184
G PD +TY LI Y G
Sbjct: 368 RGVSPDEHTYSL-----------------------------------LIDAYVNAGRWES 392
Query: 185 ARYVLDEMPRRDV----VSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMP 240
AR VL EM DV ++ ++AG+ + +V +EM +G KPD
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF------ 446
Query: 241 AVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
+NV+I + K + +A+ + +M +EPD
Sbjct: 447 ---------------------------YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDR 479
Query: 301 ITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDK 360
+T +++ ++ + E +ER+ P N +I+ Y +D +++ K
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGK 539
Query: 361 MKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGL 416
MK + +V + T+L+ YG +G+ +A+ EM++ G+ P + A+++A + GL
Sbjct: 540 MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGL 599
Query: 417 LEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP---LEPNERVWG 473
E+ F+ MT D + P + L++ G R EA+ V++ M ++P+ +
Sbjct: 600 SEQAVNAFRVMTSD-GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Query: 474 TLLSS 478
TL+ +
Sbjct: 659 TLMKA 663
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 181/434 (41%), Gaps = 61/434 (14%)
Query: 172 LISMYGKCGCLLEARYVLDEMPRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPD 231
LI G+ L EA ++L + +++N+++ A+N + AL + +M G + D
Sbjct: 173 LIHALGRSEKLYEA-FLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSD 231
Query: 232 AGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSL----VSWNVMITVYMKNSMPGNAIDL 287
+ ++ ++T ++ + + + ++ +E+ L N +I + K+ P A+ L
Sbjct: 232 FVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQL 291
Query: 288 YLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYAR 347
+ + + T S++ A D L + E + + ++P N+L+ Y +
Sbjct: 292 LGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVK 351
Query: 348 CGCLEDAQKVFDKMKFRDVA----SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIA 403
G L+DA+ + +M+ R V+ +++ LI AY G+ +A + EM+ + P+
Sbjct: 352 TGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV 411
Query: 404 FVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM 463
F +L+ G ++ K+M + P + + ++D G+ +D A +M
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 464 ---PLEPNERVWGTLLSSCRVYSNMDIGLLAADNLLQLSPEQSGYYVLLSNIYAKAGRWK 520
+EP+ W TL+ + + K GR
Sbjct: 471 LSEGIEPDRVTWNTLI----------------------------------DCHCKHGRHI 496
Query: 521 EVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIYEELYVLVGKMKELG 580
E+ M+RR N+ +NS GD +E ++++ L+GKMK G
Sbjct: 497 VAEEMFEAMERRGCLPCATTYNIMINSY------GD------QERWDDMKRLLGKMKSQG 544
Query: 581 YVPE--TDSALHDV 592
+P T + L DV
Sbjct: 545 ILPNVVTHTTLVDV 558
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 149/369 (40%), Gaps = 45/369 (12%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVV----FYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L++ Y G A + E+ +R V Y+++I +YVN + A +V +EM G
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
+P+++ + +L + Q+ M + + + N +I +GK CL A
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 187 YVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
D M D V+WN+++ + ++ R A E+ M+ G P A T
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATT-------- 516
Query: 243 TNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAIT 302
+N+MI Y + L +M+ + P+ +T
Sbjct: 517 -------------------------YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 303 CASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK 362
+++ G E ++ L+P+ + N+LI+ YA+ G E A F M
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 363 FRDVA----SWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLE 418
+ + SLI+A+G + A A+ M+ +G+ PD + + ++ A +
Sbjct: 612 SDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQ 671
Query: 419 EGKVYFKQM 427
+ V +++M
Sbjct: 672 KVPVVYEEM 680
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 189/399 (47%), Gaps = 28/399 (7%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
N Y ++++Y+ +R Y+ A V+ E+ GG + D + Y +L A + + Q+
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVF 258
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQN 210
M K + + +I G+ G EA + +EM +VV +N+++ A+
Sbjct: 259 EDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKG 318
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVS--W 268
D A++V M + G +P+ T + L+ + ++ L D + + K+ + +
Sbjct: 319 KMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLV---AEGQLVRLDGVVEISKRYMTQGIY 375
Query: 269 NVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPA-CG---DLSALLLGRRIHE 324
+ ++ K A L+ M V+ + + S+L + CG + A+ + +IHE
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 325 YVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISAYGMTG 380
K + + ++ N++ + + +F+KMK D+ ++ LI+++G G
Sbjct: 436 ----KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 381 QGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHF 440
+ A+ +F E++ S PD I++ ++++ +G ++E V FK+M + + P + +
Sbjct: 492 EVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK-GLNPDVVTY 550
Query: 441 ACLVDLLGRAGRVDEAYDVIKQMPL---EPNERVWGTLL 476
+ L++ G+ RV+ AY + ++M + +PN + LL
Sbjct: 551 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 169/365 (46%), Gaps = 24/365 (6%)
Query: 66 SLGIKLMRAYAACGEP-GTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVN 124
++ I+ M C E G ++ E NVV YN +++ + + A+ VF MV
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 125 GGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLE 184
G RP+ YTY +L L ++L G + + + + L+ K G + E
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQL---VRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSE 390
Query: 185 ARYVLDEM------PRRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASL 238
A + +M RD S+ SM+ + +A+E+ ++ + G D ++
Sbjct: 391 AHRLFCDMWSFPVKGERD--SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTV 448
Query: 239 MPAVTNTSSDNVLYVKDIFINLEKKS----LVSWNVMITVYMKNSMPGNAIDLYLQMEKS 294
A+ + ++ D+F ++K + ++N++I + + AI+++ ++E+S
Sbjct: 449 FSALGKLK--QISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 295 EVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDA 354
+ +PD I+ S++ G + + ++ K L P+++ ++L++ + + +E A
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 355 QKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAI--L 408
+F++M + ++ ++ L+ G+ A+ L+S+M+ G++PD I + + L
Sbjct: 567 YSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
Query: 409 SACSH 413
+ SH
Sbjct: 627 QSVSH 631
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 123/580 (21%), Positives = 226/580 (38%), Gaps = 74/580 (12%)
Query: 71 LMRAYAACGEPGTARKVFDEISERNVV----FYNVMIRSYVNNRWYNDALLVFREMVNGG 126
+++ Y G+ AR+ F+ + R + Y +I +Y R ++AL R+M G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEAR 186
TY ++ S + + ++ N + +I + + + A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 187 YVLDEMPRRDVVS----WNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAV 242
++ EM + + +++M+ GY L V + + + G P T L+
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLY 494
Query: 243 TNTSS-DNVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDA 300
T L V + K +L ++++MI ++K NA ++ M K ++PD
Sbjct: 495 TKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDV 554
Query: 301 ITCASVLPA-CGDLSALLLGRRIHEYVERKKLR------------------PNLLLENSL 341
I +++ A CG + + R I E +KLR ++ +
Sbjct: 555 ILYNNIISAFCGMGN---MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEV 611
Query: 342 IDMYARCGC-------------------LEDAQKVFDKMKFRDVA----SWTSLISAYGM 378
DM RCGC +E A ++ D+M V+ ++T ++ Y
Sbjct: 612 FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYAS 671
Query: 379 TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIE 438
G A F+ +QN G+ D + A+L AC SG ++ K+M+ R PR
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA--RNIPRNS 729
Query: 439 H-FACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLSSCRVYSNMDIGLLAADN 494
+ L+D R G V EA D+I+QM E P+ + + +S+C +M+ +
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 495 L--LQLSPEQSGYYVLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTF 552
+ L + P Y L+ +A+A ++ MK I+ + H
Sbjct: 790 MEALGVKPNIKTYTTLIKG-WARASLPEKALSCYEEMKAMGIKPDKAV--------YHCL 840
Query: 553 LAGDTSHPQSKE--IYEELYVLVGKMKELGYVPETDSALH 590
L S E IY + + +M E G + + +A+H
Sbjct: 841 LTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVH 880
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 183/406 (45%), Gaps = 18/406 (4%)
Query: 86 KVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSD 145
++ ++ + +V YN +I + +DA V M + F PD TY ++ +
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 146 NLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWN 201
L L++ +L + LI G + EA ++DEM R D+ ++N
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 202 SMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFIN 259
+++ G + D A E+ R ++ G +PD + L+ A+ N + + +F
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 260 LEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLG 319
++V+++++IT ++ A++L M++ + PDA + ++ A L +
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 320 RRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISA 375
E + P+++ N+++ + G + A ++F K+ + +S+ ++ SA
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 376 YGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD--DYRI 433
+G AL + EM ++GI PD I + +++S G+++E F+ + D
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA---FELLVDMRSCEF 504
Query: 434 TPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNERVWGTLL 476
P + + ++ +A R+++A +V++ M PNE + L+
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 550
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 176/370 (47%), Gaps = 11/370 (2%)
Query: 93 ERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQ 152
E ++V N ++ + + +DA+ + +MV G++PD T+ ++ + +
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 153 LHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP----RRDVVSWNSMVAGYA 208
L M++ +L +++ K G A +L++M +VV +++++
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 209 QNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTS--SDNVLYVKDIFINLEKKSLV 266
+ DDAL + EM++ G +P+ T +SL+ + N SD + D+ +LV
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Query: 267 SWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYV 326
+++ +I ++K A LY +M K ++P+ T +S++ L L +++ E +
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384
Query: 327 ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQG 382
RK PN++ N+LI+ + + ++ ++F +M R + ++T+LI +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 383 CNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFAC 442
NA +F +M + G+ P+ + + +L +G L + V F+ + + P I +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNI 503
Query: 443 LVDLLGRAGR 452
+++ + +AG+
Sbjct: 504 MIEGMCKAGK 513
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 209/472 (44%), Gaps = 52/472 (11%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
Y ++R+ +++ +DA+ +F M P + +L A + + + M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFD 214
+ + NL+ N LI+ + +C L A +L +M + D+V+ NS++ G+ R
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVT--NTSSDNVLYV------------------- 253
DA+ + +M ++G KPD T +L+ + N +S+ V +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 254 --------KDIFINLEKK--------SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVE 297
D+ +NL K ++V ++ +I K +A++L+ +ME V
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 298 PDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKV 357
P+ IT +S++ + R+ + +K+ PNL+ ++LID + + G L A+K+
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 358 FDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSH 413
+++M R ++ +++SLI+ + M + A + M P+ + + +++
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 414 SGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQM---PLEPNER 470
+ +++G F++M+ + + + L+ +A D A V KQM + PN
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 471 VWGTLLSSCRVYSNMDIGLLAADNLLQ--LSPEQSGYYVLLSNIYAKAGRWK 520
+ LL + ++ + L + + P+ Y +++ + KAG+WK
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM-CKAGKWK 515
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 21/353 (5%)
Query: 95 NVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLH 154
+VV Y +I S N N AL +F +M N G RPD Y ++ S R L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 155 GAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQN 210
M K ++ ++ N LI + K G L+A + +EM R ++ ++ S++ G+
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 211 MRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-DNVLYVKDIFINLEKKSL---- 265
D+A ++ M+ G PD SL+ D+ + IF + +K L
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM---KIFYEMSQKGLTGNT 352
Query: 266 VSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPAC----GDLSALLLGRR 321
+++ +I + + P A +++ M V P+ I +VL C G + L+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN-IRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 322 IHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR--DVASWTSLISAYGM- 378
+ E + PN+ N L+ G LE A VF+ M+ R D+ T I GM
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 379 -TGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDD 430
G+ NA+ LF + + G+ P+ + + ++S GL E V F++M +D
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 177/396 (44%), Gaps = 21/396 (5%)
Query: 99 YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAML 158
Y ++R+ +++ +N+AL +F MV P + +L + + L +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 159 KVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRR----DVVSWNSMVAGYAQNMRFD 214
+ + +L+ N L++ + + A L +M + D+V++ S++ G+ R +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 215 DALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLE----KKSLVSWNV 270
+A+ + +M ++G KPD +++ ++ N Y +F +E + +V +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN--YALSLFDQMENYGIRPDVVMYTS 217
Query: 271 MITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKK 330
++ + +A L M K +++PD IT +++ A L ++ + R
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 331 LRPNLLLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISAYGMTGQGCNAL 386
+ PN+ SLI+ + GC+++A+++F M+ F DV ++TSLI+ + + +A+
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 387 ALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDL 446
+F EM G++ + I + ++ G + F M + P I + L+
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHC 396
Query: 447 LGRAGRVDEAYDVIKQMP------LEPNERVWGTLL 476
L G+V +A + + M + PN + LL
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLL 432
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 109/497 (21%), Positives = 203/497 (40%), Gaps = 63/497 (12%)
Query: 100 NVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLK 159
N++++ ++R N A V+ M+ G P T+ +L +C + +L ++ M +
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 160 VRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV----SWNSMVAGYAQNMRFDD 215
++++ N LI+ + K G + EAR +M R S+N ++ GY + FDD
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 216 ALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVY 275
A V EM + G P T + A+ + + +++ ++ +VS+N ++ Y
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFG--RIDDARELLSSMAAPDVVSYNTLMHGY 384
Query: 276 MKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNL 335
+K A L+ + ++ P +T
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTY-------------------------------- 412
Query: 336 LLENSLIDMYARCGCLEDAQKVFDKMK----FRDVASWTSLISAYGMTGQGCNALALFSE 391
N+LID G LE AQ++ ++M F DV ++T+L+ + G A ++ E
Sbjct: 413 ---NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDE 469
Query: 392 MQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAG 451
M GI PD A+ G ++ ++M P + + +D L + G
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVG 529
Query: 452 RVDEAYDV---IKQMPLEPNERVWGTLLSSCRVYSNMDIGLLAADNLL--QLSPEQSGYY 506
+ +A + I ++ L P+ + T++ + D +L +L P Y+
Sbjct: 530 NLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYF 589
Query: 507 VLLSNIYAKAGRWKEVTEVRSLMKRRRIRKTPGISNVELNSQVHTFLAGDTSHPQSKEIY 566
VL+ +AKAGR ++ + + MK+R +R N L AG+
Sbjct: 590 VLIYG-HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK---AGNI--------- 636
Query: 567 EELYVLVGKMKELGYVP 583
+E Y + KM+E G P
Sbjct: 637 DEAYRYLCKMEEEGIPP 653
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 180/419 (42%), Gaps = 25/419 (5%)
Query: 78 CGEPGTARKVFDEISERNVVF----YNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYT 133
G+ K++ E+ RN+ F YN++I + N +A +M GF Y+
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 134 YPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMP 193
+ +++ + ML + N I G + +AR +L M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 194 RRDVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSS-DNVLY 252
DVVS+N+++ GY + +F +A + ++ P T +L+ + + + +
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 253 VK-DIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACG 311
+K ++ L ++++ ++ ++KN A ++Y +M + ++PD A A G
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY--AYTTRAVG 488
Query: 312 DLSALLLGR-----RIH-EYVERKKLRPNLLLENSLIDMYARCG----CLEDAQKVFDKM 361
+L LG R+H E V P+L + N ID + G +E +K+F
Sbjct: 489 ELR---LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 362 KFRDVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGK 421
D ++T++I Y GQ A L+ EM + P I + ++ + +G LE+
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 422 VYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPLE---PNERVWGTLLS 477
Y +M + P + L+ + +AG +DEAY + +M E PN+ + L+S
Sbjct: 606 QYSTEMKKR-GVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 143/355 (40%), Gaps = 32/355 (9%)
Query: 79 GEPGTARKVFDEISERNVVFYNVMIRSYVNNRWYNDALLVFREMVNGGFRPDNYTYPCVL 138
G AR++ ++ +VV YN ++ Y+ + +A L+F ++ G P TY ++
Sbjct: 357 GRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 139 KACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLLEARYVLDEMPRRDVV 198
S NL +L M + ++ L+ + K G L A V DEM R+ +
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 199 SWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLMPAVTNTSSDNVLYVKDIFI 258
GYA R L LG A + M A + + D +Y
Sbjct: 477 P-----DGYAYTTRAVGELR-------LGDSDKAFRLHEEMVATDHHAPDLTIY------ 518
Query: 259 NLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLL 318
NV I K AI+ ++ + + PD +T +V+ + +
Sbjct: 519 ----------NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKM 568
Query: 319 GRRIHEYVERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFRDVASWTSLISA--Y 376
R +++ + RK+L P+++ LI +A+ G LE A + +MK R V +A Y
Sbjct: 569 ARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLY 628
Query: 377 GMTGQGC--NALALFSEMQNSGISPDHIAFVAILSACSHSGLLEEGKVYFKQMTD 429
GM G A +M+ GI P+ ++ ++S EE +K+M D
Sbjct: 629 GMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 43/301 (14%)
Query: 175 MYGKCGCLLEARYVLDEMPR----RDVVSWNSMVAGYAQNMRFDDALEVCREM-DDLGQK 229
+YG G A + DEMP R V S+N++++ Y + + D+A++ +E+ + LG
Sbjct: 131 LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGIT 190
Query: 230 PDAGTMASLMPAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYL 289
PD LV++N MI + + + ++
Sbjct: 191 PD---------------------------------LVTYNTMIKALCRKGSMDDILSIFE 217
Query: 290 QMEKSEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCG 349
++EK+ EPD I+ ++L + G RI + ++ K L PN+ NS + R
Sbjct: 218 ELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK 277
Query: 350 CLEDAQKVFDKMKFR----DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFV 405
DA + D MK DV ++ +LI+AY + + ++EM+ G++PD + +
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 406 AILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMPL 465
++ G L+ V + +++ R + +V+ L AG++DEA ++K L
Sbjct: 338 MLIPLLCKKGDLDRA-VEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKL 396
Query: 466 E 466
+
Sbjct: 397 Q 397
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 116/278 (41%), Gaps = 44/278 (15%)
Query: 69 IKLMRAYAACGEPGTARKVFDEISE----RNVVFYNVMIRSYVNNRWYNDALLVFREMVN 124
I++M Y G A K+FDE+ E R V +N ++ +YVN++ ++A+ F+E+
Sbjct: 126 IRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPE 185
Query: 125 G-GFRPDNYTYPCVLKACSCSDNLRFGLQLHGAMLKVRLDWNLFVGNGLISMYGKCGCLL 183
G PD TY ++KA ++ L + + K + +L N L+ + + +
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245
Query: 184 EARYVLDEMPRR----DVVSWNSMVAGYAQNMRFDDALEVCREMDDLGQKPDAGTMASLM 239
E + D M + ++ S+NS V G +N +F DAL + M G PD T
Sbjct: 246 EGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHT----- 300
Query: 240 PAVTNTSSDNVLYVKDIFINLEKKSLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPD 299
+N +IT Y ++ + Y +M++ + PD
Sbjct: 301 ----------------------------YNALITAYRVDNNLEEVMKCYNEMKEKGLTPD 332
Query: 300 AITCASVLPACGDLSALLLGRRIHEYVERKKL--RPNL 335
+T ++P L + E + KL RPN+
Sbjct: 333 TVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNM 370
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 166/372 (44%), Gaps = 28/372 (7%)
Query: 71 LMRAYAACGEPGTARKVFDEISER----NVVFYNVMIRSYVNNRWYNDALLVFREMVNGG 126
L+ AY G A +V +S+ NV+ Y ++ SY N+A +FR M + G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 127 FRPDNYTYPCVLKACSCSDNLRFGLQLHGAML---KVRLDWNLFVGNGLISMYGKCGCLL 183
P TY +LK D + ++ +L K L + + + +I MY K G
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 184 EARYVLDEMPRRDV----VSWNSMVAGYAQNMRFDDALEVCREMDDLGQK----PDAGTM 235
+AR V M + V V++NS+ M F+ + + ++ D Q+ PD +
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSL-------MSFETSYKEVSKIYDQMQRSDIQPDVVSY 317
Query: 236 ASLMPAVTNT-SSDNVLYVKDIFINLE-KKSLVSWNVMITVYMKNSMPGNAIDLYLQMEK 293
A L+ A + L V + ++ + + ++N+++ + + M A ++ M +
Sbjct: 318 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
Query: 294 SEVEPDAITCASVLPACGDLSALLLGRRIHEYVERKKLRPNLLLENSLIDMYARCGCLED 353
+ PD + ++L A + S + + + ++ PN++ +LI YA+ +E
Sbjct: 378 DRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEK 437
Query: 354 AQKVFDKMKFRDVAS----WTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAFVAILS 409
+V++KM+ + + T+++ A G +AL + EM++ G+ PD A +LS
Sbjct: 438 MMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLS 497
Query: 410 ACSHSGLLEEGK 421
S LEE K
Sbjct: 498 LASTQDELEEAK 509
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 43/255 (16%)
Query: 264 SLVSWNVMITVYMKNSMPGNAIDLYLQMEKSEVEPDAITCASVLPACGDLSALLLGRRIH 323
+++S+ ++ Y + NA ++ +M+ S EP AIT +L + +
Sbjct: 173 NVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVF 232
Query: 324 EYV---ERKKLRPNLLLENSLIDMYARCGCLEDAQKVFDKMKFR---------------- 364
E + ++ L+P+ + + +I MY + G E A+KVF M +
Sbjct: 233 ETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFE 292
Query: 365 --------------------DVASWTSLISAYGMTGQGCNALALFSEMQNSGISPDHIAF 404
DV S+ LI AYG + AL++F EM ++G+ P H A+
Sbjct: 293 TSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAY 352
Query: 405 VAILSACSHSGLLEEGKVYFKQMTDDYRITPRIEHFACLVDLLGRAGRVDEAYDVIKQMP 464
+L A + SG++E+ K FK M D RI P + + ++ A ++ A K++
Sbjct: 353 NILLDAFAISGMVEQAKTVFKSMRRD-RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
Query: 465 L---EPNERVWGTLL 476
+ EPN +GTL+
Sbjct: 412 VDGFEPNIVTYGTLI 426