Miyakogusa Predicted Gene

Lj4g3v2539190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2539190.1 tr|F2CYX2|F2CYX2_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,42.28,4e-17,WD40,WD40 repeat; no description,WD40/YVTN
repeat-like-containing domain;
WD_REPEATS_REGION,WD40-rep,gene.g56951.t1.1
         (254 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01470.1 | Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein | ...   214   3e-56
AT5G50650.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   214   6e-56
AT5G50550.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   214   6e-56
AT3G52190.1 | Symbols: PHF1 | phosphate transporter traffic faci...   112   2e-25

>AT2G01470.1 | Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein |
           chr2:212215-214435 REVERSE LENGTH=393
          Length = 393

 Score =  214 bits (546), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/241 (50%), Positives = 157/241 (65%), Gaps = 26/241 (10%)

Query: 19  RWFDWDLNKNSEIHQLGLKSSEKVLTQLEDVGLQLALAFNNDGTALAAGGEDGKLKVFKW 78
           + F W+   + E +Q G   SE+V+ +L DVG QLALAFN +G+ LAAG EDG L+VFKW
Sbjct: 125 KLFHWEDIMSREDNQAG--ESEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKW 182

Query: 79  PSMEIILNEPNAHSTVKDLHFSSDGKWIVSLGSGGPCRVWDVSSSIVLASLSNENREIFS 138
           PSM  +LNE  AHS+VK L FS  G+++VSLG G  CRVWDV++S  +ASLS E  E+F+
Sbjct: 183 PSMNTLLNESQAHSSVKCLTFSESGQFLVSLG-GPVCRVWDVNASAAVASLSKEKDEMFA 241

Query: 139 ACRFSQTNDSTRVLYIAAMADNRGSILTWNTPTWERMGSN-------------------- 178
           +CRFS  +    VLYIAA  +  GSI+T +T  W+R  S                     
Sbjct: 242 SCRFSVDSAGNEVLYIAANTERGGSIITCDTKLWKRKWSKPIKKNSISAFNVSADGKLLA 301

Query: 179 -GTPSGDIVIVSSTNMQIQTMVKKAHIGIVTALAFSPDSRLRALASVSWDSSARVTIIEE 237
            GT  GD++I+ ST MQ   +VKKAH+G+VTAL FSPDS  R L SVS+DS AR+T+IE+
Sbjct: 302 IGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDS--RGLVSVSFDSRARLTMIEQ 359

Query: 238 K 238
           K
Sbjct: 360 K 360


>AT5G50650.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:20610212-20612061 FORWARD LENGTH=383
          Length = 383

 Score =  214 bits (544), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 119/250 (47%), Positives = 159/250 (63%), Gaps = 29/250 (11%)

Query: 19  RWFDWDLNKNSEIHQLGLKSSEKVLTQLEDVGLQLALAFNNDGTALAAGGEDGKLKVFKW 78
           R FDW+    + I     + SEKV+ +L+DVG QL+L+FN DGT LA G EDG L+VF+W
Sbjct: 116 RLFDWE----NIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEW 171

Query: 79  PSMEIILNEPNAHSTVKDLHFSSDGKWIVSLGSGGPCRVWDVSSSIVLASLSNENREIFS 138
           PSM+ +LNE   H++VK L FS  GK++VSLG+   CRVWDV++S  +ASLS E  E+F+
Sbjct: 172 PSMKTLLNESKTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNASAAIASLSKEKDEMFA 230

Query: 139 ACRFSQTNDSTRVLYIAAMADNRGSILTWNTPTWERMGSN-------------------- 178
           +CRFS  N  + VLY+AA     GSI+TW+T +W R  S                     
Sbjct: 231 SCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLL 290

Query: 179 --GTPSGDIVIVSSTNMQIQTMVKKAHIGIVTALAFSPDSRLRALASVSWDSSARVTIIE 236
             GT  GD++I+ ST MQ   +VKKAH+G+VTAL FSPDS  R L SVS+DS AR+T+I+
Sbjct: 291 AVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDS--RCLVSVSFDSRARLTVIK 348

Query: 237 EKNKSAAAYF 246
           +K +    Y 
Sbjct: 349 QKGEKRRVYL 358


>AT5G50550.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr5:20576870-20578719 FORWARD LENGTH=383
          Length = 383

 Score =  214 bits (544), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 119/250 (47%), Positives = 159/250 (63%), Gaps = 29/250 (11%)

Query: 19  RWFDWDLNKNSEIHQLGLKSSEKVLTQLEDVGLQLALAFNNDGTALAAGGEDGKLKVFKW 78
           R FDW+    + I     + SEKV+ +L+DVG QL+L+FN DGT LA G EDG L+VF+W
Sbjct: 116 RLFDWE----NIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEW 171

Query: 79  PSMEIILNEPNAHSTVKDLHFSSDGKWIVSLGSGGPCRVWDVSSSIVLASLSNENREIFS 138
           PSM+ +LNE   H++VK L FS  GK++VSLG+   CRVWDV++S  +ASLS E  E+F+
Sbjct: 172 PSMKTLLNESKTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNASAAIASLSKEKDEMFA 230

Query: 139 ACRFSQTNDSTRVLYIAAMADNRGSILTWNTPTWERMGSN-------------------- 178
           +CRFS  N  + VLY+AA     GSI+TW+T +W R  S                     
Sbjct: 231 SCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLL 290

Query: 179 --GTPSGDIVIVSSTNMQIQTMVKKAHIGIVTALAFSPDSRLRALASVSWDSSARVTIIE 236
             GT  GD++I+ ST MQ   +VKKAH+G+VTAL FSPDS  R L SVS+DS AR+T+I+
Sbjct: 291 AVGTLEGDVLIIDSTKMQTNQIVKKAHLGLVTALTFSPDS--RCLVSVSFDSRARLTVIK 348

Query: 237 EKNKSAAAYF 246
           +K +    Y 
Sbjct: 349 QKGEKRRVYL 358


>AT3G52190.1 | Symbols: PHF1 | phosphate transporter traffic
           facilitator1 | chr3:19354117-19356910 REVERSE LENGTH=398
          Length = 398

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 110/221 (49%), Gaps = 26/221 (11%)

Query: 41  KVLTQLEDVGLQLALAFNNDGTALAAGGEDGKLKVFKWPSMEIILNEPNAHSTVKDLHFS 100
           K L  L++ GLQ  +AF+ DG+ LA GG DG L++ +WP++ +IL+EP AH +++D+ FS
Sbjct: 114 KELLPLQNAGLQKCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFS 173

Query: 101 SDGKWIVSLGSGGPCRVWDVSSSIVLASLSNENREIFSACRFSQTNDSTR-VLYIAAMAD 159
            D +++ +  + G  R+W       L++L     E    CRFS+  D T+  L+ AA   
Sbjct: 174 LDSEFLATTSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSK--DGTKPFLFCAAQRG 231

Query: 160 NRGSILTWNTPTWERMGSN---------------------GTPSGDIVIVSSTNMQIQTM 198
           +   +  ++  TW+++G                       G   GD+ +     M+I   
Sbjct: 232 DTPMVNVYDISTWKKLGFKKLSRKTASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYHY 291

Query: 199 VKKAHIGI-VTALAFSPDSRLRALASVSW-DSSARVTIIEE 237
            K+ H+G  + +L F P  R+    S  W +   ++T+ +E
Sbjct: 292 SKRLHLGQSIASLEFCPSERVMLTTSSEWGEMVTKLTVPKE 332