Miyakogusa Predicted Gene
- Lj4g3v2538150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2538150.1 Non Chatacterized Hit- tr|B9RMI9|B9RMI9_RICCO
ATP-dependent RNA helicase, putative OS=Ricinus
commun,76.88,0,ATP-DEPENDENT RNA HELICASE,NULL; P-loop containing
nucleoside triphosphate hydrolases,NULL; HELICASE,CUFF.51105.1
(698 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27900.1 | Symbols: | RNA helicase family protein | chr1:971... 1054 0.0
AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |... 554 e-158
AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein | chr1... 531 e-151
AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family prote... 531 e-151
AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protei... 524 e-149
AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein | c... 516 e-146
AT3G62310.1 | Symbols: | RNA helicase family protein | chr3:230... 492 e-139
AT2G47250.1 | Symbols: | RNA helicase family protein | chr2:193... 487 e-138
AT4G18465.1 | Symbols: | RNA helicase family protein | chr4:101... 442 e-124
AT1G26370.1 | Symbols: | RNA helicase family protein | chr1:912... 436 e-122
AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosph... 387 e-107
AT4G01020.1 | Symbols: | helicase domain-containing protein / I... 301 1e-81
AT5G10370.1 | Symbols: | helicase domain-containing protein / I... 301 1e-81
AT1G58050.1 | Symbols: | RNA helicase family protein | chr1:214... 247 2e-65
AT2G35920.1 | Symbols: | RNA helicase family protein | chr2:150... 217 3e-56
AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 191 2e-48
AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protei... 188 1e-47
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissu... 180 2e-45
AT1G58060.1 | Symbols: | RNA helicase family protein | chr1:214... 177 3e-44
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:204... 169 4e-42
AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 166 5e-41
AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 166 7e-41
AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase famil... 159 9e-39
AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 149 6e-36
AT5G14900.1 | Symbols: | helicase associated (HA2) domain-conta... 137 4e-32
>AT1G27900.1 | Symbols: | RNA helicase family protein |
chr1:9715615-9720346 REVERSE LENGTH=700
Length = 700
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/706 (72%), Positives = 594/706 (84%), Gaps = 14/706 (1%)
Query: 1 MATLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---IAVTQPXXX 57
MA LPI+Q+EEKI+ETVE N VVV+IGETGSGKSTQLSQ+L R G++K IA+TQP
Sbjct: 1 MANLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRV 60
Query: 58 XXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDV 117
QELDV LGE+VGYAIRFEDRT+ TRIKYLTDGVLLRESL+NP L++Y V
Sbjct: 61 AAVSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSV 120
Query: 118 IILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGK 177
IILDEAHERSLNTDIL+GL+KRLV++R+SN KVLITSATLDG+KVS+FF+ CPVL++PGK
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGK 180
Query: 178 LYPVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRAL 237
LYPVEILYSKERP +Y+ES LK A+DIH REPEGDILIFMTGQDDIEKLVS+LE+KVR+L
Sbjct: 181 LYPVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSL 240
Query: 238 EEGSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGY 297
EGSCMDAII+PLHGSLPPE+QVRVFSPPPPNCRR IV+TNIAETSLTVDGVVYVIDSGY
Sbjct: 241 AEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGY 300
Query: 298 VKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPE 357
VKQRQYNPSSGM+SLDV+QISKVQANQRAGRAGRTRPGKCYRLYP +++D+FLD T+PE
Sbjct: 301 VKQRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPE 360
Query: 358 IQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIG 417
IQR+SLAGSVLYLKSLDLPDIDILKFDFLD PSSESL+DALKQLY IDAIDENGAIT IG
Sbjct: 361 IQRTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIG 420
Query: 418 RKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALLPGQRQSKIEKKRKHPM-P 476
R M++LPLEPSLSRTLIEAN GC+++ALTV AMLSAET LLP R EKKRKH
Sbjct: 421 RTMSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPA-RSKPSEKKRKHDEDS 479
Query: 477 NLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAK 536
NLP+GSG GDHIQLLQI+E WDR +YD WCK+NG+QVRGM+FV+DVR+QL QIMQKI+K
Sbjct: 480 NLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISK 539
Query: 537 GPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNGYRTLNFQAQVVQVHPSSV 596
L++ A G R DYR LRKALCVG ANQ+AER + HNGYRTL+FQ+Q+VQVHPSSV
Sbjct: 540 DRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLSFQSQLVQVHPSSV 599
Query: 597 LTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRWTTTVMNKLKTLDVYKLSGG----I 652
L+AD+ G P+YVVYHEL++T +PFMRNVC+VDM W + K++ L+V KLSGG
Sbjct: 600 LSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIEKLNVRKLSGGPAPSF 659
Query: 653 NHAEEESERSLPDLPKKDVQVAGAVNDSESRIQAARERFLARKANK 698
EE++E L K + + + ESRI+AARERFLARK K
Sbjct: 660 KVPEEKTE-----LSKNNAETPAVSENVESRIEAARERFLARKGQK 700
>AT3G26560.1 | Symbols: | ATP-dependent RNA helicase, putative |
chr3:9750122-9753719 REVERSE LENGTH=1168
Length = 1168
Score = 554 bits (1427), Expect = e-158, Method: Compositional matrix adjust.
Identities = 290/653 (44%), Positives = 422/653 (64%), Gaps = 32/653 (4%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFS---KIAVTQPXXXXX 59
+LPI + ++++++ V N V+VVIGETGSGK+TQ++Q L G++ KI TQP
Sbjct: 514 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAA 573
Query: 60 XXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVII 119
+E RLGEEVGYAIRFED T P T IKY+TDG+LLRE L + L++Y VI+
Sbjct: 574 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 633
Query: 120 LDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLY 179
LDEAHER+++TD+L GL+K+L+K R +L++++TSATLD +K S +F +C + +IPG+ +
Sbjct: 634 LDEAHERTIHTDVLFGLLKKLMK-RRLDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 692
Query: 180 PVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEE 239
PVEILY+K+ +YL++ L T L IH EPEGDIL+F+TGQ++I+ L ++++ L +
Sbjct: 693 PVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGK 752
Query: 240 GSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVK 299
+ + II P++ +LP E+Q R+F PPPP R+++VATNIAE SLT+DG+ YV+D G+ K
Sbjct: 753 -NVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAK 811
Query: 300 QRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQ 359
Q YNP G+ SL + IS+ A QRAGRAGRT PGKCYRLY +++E ++PEIQ
Sbjct: 812 QNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQ 871
Query: 360 RSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGRK 419
R +L + L +K++ + D+L FDF+DPP ++L A++QLY + A+DE G +T +GRK
Sbjct: 872 RINLGMTTLTMKAMGIN--DLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRK 929
Query: 420 MAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALL-PGQRQSKIEKKR-KHPMPN 477
MAE PLEP LS+ L+ + + GC E LT+ AM+ P ++Q++ ++KR K P
Sbjct: 930 MAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPE 989
Query: 478 LPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKG 537
GDH+ LL +YE W ++ WC +N +Q R + +DVRKQL IM K
Sbjct: 990 -------GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYK-- 1040
Query: 538 PLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNGYRTLNFQAQVVQVHPSSVL 597
LD+ G +++ +RKA+ G+ A RK GYRTL + Q V +HPSS L
Sbjct: 1041 -LDVVTAG------KNFTKIRKAITAGFFFHGA-RKDPQEGYRTL-VENQPVYIHPSSAL 1091
Query: 598 TADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRWTTTVMNK-LKTLDVYKLS 649
+ PD+V+YH+LV T K +MR V +D +W + + K D K+S
Sbjct: 1092 ----FQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMS 1140
>AT1G32490.2 | Symbols: ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1034
Length = 1034
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 275/637 (43%), Positives = 410/637 (64%), Gaps = 33/637 (5%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---IAVTQPXXXXX 59
+LPI Y +++L+ VE + V+V++G+TGSGK+TQ+ Q L G++K + TQP
Sbjct: 393 SLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAA 452
Query: 60 XXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVII 119
QE+ V+LG EVGY+IRFED TS T +KY+TDG+LLRE L P+L Y V+I
Sbjct: 453 MSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVI 512
Query: 120 LDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLY 179
+DEAHER+L+TDIL GL+K + + R +LK+LI+SAT+D +K S +F P+ S PG+ Y
Sbjct: 513 VDEAHERTLSTDILFGLVKDIARFRP-DLKLLISSATMDAEKFSDYFDTAPIFSFPGRRY 571
Query: 180 PVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEE 239
PVEI Y+ +Y+++ + T L IH REP GDIL+F TGQ++IE L+ ++R L
Sbjct: 572 PVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGL-- 629
Query: 240 GSCM-DAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYV 298
G+ + + II P++ +LP ELQ ++F P P R++++ATNIAETSLT+DG+ YV+D G+
Sbjct: 630 GTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFS 689
Query: 299 KQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEI 358
K + YNP +GM SL + ISK A QRAGRAGRT PGKCYRLY + + ++ + TVPE+
Sbjct: 690 KMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEV 749
Query: 359 QRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGR 418
QR++LA VL LKSL + D++ FDF+DPP +E+L +L+ L+ + A+++ G +T GR
Sbjct: 750 QRTNLASVVLALKSLGIH--DLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGR 807
Query: 419 KMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALL--PGQRQSKIEKKRKHPMP 476
+MAE PL+P LS+ ++ ++ Y C E +++AAMLS ++ P +Q + R
Sbjct: 808 RMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARM---- 863
Query: 477 NLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAK 536
N G+ +GDHI LL++Y W ++ WC +N +QVR M RD+R QL +++++
Sbjct: 864 NFHTGN-VGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERV-- 920
Query: 537 GPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNG-YRTLNFQAQVVQVHPSS 595
+DI ++ N + ++RK++ G+ A K+ NG YRT+ Q V +HP+S
Sbjct: 921 -EIDISSNLN------ELDSVRKSIVAGFFPHTA--KLQKNGSYRTVK-HPQTVHIHPNS 970
Query: 596 VLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRW 632
L+ P +VVYHELV T K +MR V + W
Sbjct: 971 GLSQ----VLPRWVVYHELVLTSKEYMRQVTELKPEW 1003
>AT1G32490.1 | Symbols: EMB2733, ESP3 | RNA helicase family protein |
chr1:11742356-11749286 REVERSE LENGTH=1044
Length = 1044
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 275/637 (43%), Positives = 410/637 (64%), Gaps = 33/637 (5%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---IAVTQPXXXXX 59
+LPI Y +++L+ VE + V+V++G+TGSGK+TQ+ Q L G++K + TQP
Sbjct: 403 SLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEAGYTKRGKVGCTQPRRVAA 462
Query: 60 XXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVII 119
QE+ V+LG EVGY+IRFED TS T +KY+TDG+LLRE L P+L Y V+I
Sbjct: 463 MSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLRELLGEPDLASYSVVI 522
Query: 120 LDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLY 179
+DEAHER+L+TDIL GL+K + + R +LK+LI+SAT+D +K S +F P+ S PG+ Y
Sbjct: 523 VDEAHERTLSTDILFGLVKDIARFRP-DLKLLISSATMDAEKFSDYFDTAPIFSFPGRRY 581
Query: 180 PVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEE 239
PVEI Y+ +Y+++ + T L IH REP GDIL+F TGQ++IE L+ ++R L
Sbjct: 582 PVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAEEILKHRIRGL-- 639
Query: 240 GSCM-DAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYV 298
G+ + + II P++ +LP ELQ ++F P P R++++ATNIAETSLT+DG+ YV+D G+
Sbjct: 640 GTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFS 699
Query: 299 KQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEI 358
K + YNP +GM SL + ISK A QRAGRAGRT PGKCYRLY + + ++ + TVPE+
Sbjct: 700 KMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEV 759
Query: 359 QRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGR 418
QR++LA VL LKSL + D++ FDF+DPP +E+L +L+ L+ + A+++ G +T GR
Sbjct: 760 QRTNLASVVLALKSLGIH--DLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGR 817
Query: 419 KMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALL--PGQRQSKIEKKRKHPMP 476
+MAE PL+P LS+ ++ ++ Y C E +++AAMLS ++ P +Q + R
Sbjct: 818 RMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARM---- 873
Query: 477 NLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAK 536
N G+ +GDHI LL++Y W ++ WC +N +QVR M RD+R QL +++++
Sbjct: 874 NFHTGN-VGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERV-- 930
Query: 537 GPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNG-YRTLNFQAQVVQVHPSS 595
+DI ++ N + ++RK++ G+ A K+ NG YRT+ Q V +HP+S
Sbjct: 931 -EIDISSNLN------ELDSVRKSIVAGFFPHTA--KLQKNGSYRTVK-HPQTVHIHPNS 980
Query: 596 VLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRW 632
L+ P +VVYHELV T K +MR V + W
Sbjct: 981 GLSQ----VLPRWVVYHELVLTSKEYMRQVTELKPEW 1013
>AT2G35340.1 | Symbols: MEE29 | helicase domain-containing protein |
chr2:14872728-14879615 FORWARD LENGTH=1044
Length = 1044
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 272/637 (42%), Positives = 405/637 (63%), Gaps = 33/637 (5%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---IAVTQPXXXXX 59
LPI Y +++L V+ + V++++GETGSGK+TQ+ Q L G++K + TQP
Sbjct: 403 ALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAA 462
Query: 60 XXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVII 119
QE+ +LG EVGY+IRFED TS T +KY+TDG+LLRE L P+L Y VII
Sbjct: 463 MSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVII 522
Query: 120 LDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLY 179
+DEAHER+L TDIL GL+K + + R +LK+LI+SAT+D +K S FF P+ PG+ Y
Sbjct: 523 VDEAHERTLRTDILFGLVKDIARARP-DLKLLISSATMDAEKFSDFFDQAPIFRFPGRRY 581
Query: 180 PVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEE 239
PV+I ++ +Y+++ + T L IH +EP GD+L+F+ GQ++IE + L+ K+R L
Sbjct: 582 PVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGL-- 639
Query: 240 GSCM-DAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYV 298
G+ + + II P++ +LP ELQ ++F P P R++++ATNIAETSLT+DG+ YV+D G+
Sbjct: 640 GTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFS 699
Query: 299 KQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEI 358
K + YNP +GM SL V ISK A QR GRAGRT PGKCYRLY + + ++ D TVPEI
Sbjct: 700 KMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEI 759
Query: 359 QRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGR 418
QR++LA VL LKSL + ++L FDF+DPP SE+L +L+ L+ + A+++ G +T GR
Sbjct: 760 QRTNLASVVLSLKSLGIH--NLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGR 817
Query: 419 KMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALL--PGQRQSKIEKKRKHPMP 476
+MAE PL+P LS+ ++ ++ Y C E +++AAMLS ++ P +Q + + M
Sbjct: 818 RMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHAD----NAMK 873
Query: 477 NLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAK 536
N G+ +GDHI L+IY W +Y WC +N +QVR M RD+R QL +++++
Sbjct: 874 NFHVGN-VGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVE- 931
Query: 537 GPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNG-YRTLNFQAQVVQVHPSS 595
+D+ ++ N + ++RK++ G+ A K+ NG YRT+ Q V +HP+S
Sbjct: 932 --IDVSSNAN------ELDSIRKSIVAGFFPHTA--KLQKNGSYRTVK-HPQTVHIHPAS 980
Query: 596 VLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRW 632
L+ P +VVYH+LV T K +MR V + W
Sbjct: 981 GLSQ----VLPRWVVYHQLVLTSKEYMRQVTELKPEW 1013
>AT5G13010.1 | Symbols: EMB3011 | RNA helicase family protein |
chr5:4122747-4128660 FORWARD LENGTH=1255
Length = 1255
Score = 516 bits (1329), Expect = e-146, Method: Compositional matrix adjust.
Identities = 270/636 (42%), Positives = 397/636 (62%), Gaps = 29/636 (4%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---IAVTQPXXXXXX 60
LPI +++L+ + N V+VV+GETGSGK+TQL+Q L G++ + TQP
Sbjct: 558 LPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVAAM 617
Query: 61 XXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVIIL 120
+E++ LG+++GYAIRFED T P T IKY+TDGVLLRE+L + +L++Y V+++
Sbjct: 618 SVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVVVM 677
Query: 121 DEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLYP 180
DEAHERSLNTD+L G++K++V R + K+++TSATL+ K S FF P+ +IPG+ +P
Sbjct: 678 DEAHERSLNTDVLFGILKKVVA-RRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTFP 736
Query: 181 VEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEEG 240
V ILYSK +Y+E+ +K A+ IH P GDILIFMTGQD+IE L++++ L
Sbjct: 737 VNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVSS 796
Query: 241 SC---MDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGY 297
S + +I P++ LP +LQ ++F P R+ IVATNIAETSLTVDG+ YVID+GY
Sbjct: 797 SSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTGY 856
Query: 298 VKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPE 357
K + +NP GM +L V IS+ ++QRAGRAGRT PG CYRLY + +E L VPE
Sbjct: 857 GKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVPE 916
Query: 358 IQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIG 417
IQR++L VL LKSL + ++L FDF+DPP E++ +++ QL+++ A++ G +T +G
Sbjct: 917 IQRTNLGNVVLLLKSLKID--NLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLG 974
Query: 418 RKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALL-PGQRQSKIEKKRKHPMP 476
KM E PL+P L++ L+ CI E LT+ +MLS + P +R + + R+
Sbjct: 975 WKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFF- 1033
Query: 477 NLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAK 536
+P+ DH+ LL +Y+ W +DY WC D+ LQV+G+ R+VR QL I++++
Sbjct: 1034 -VPE----SDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLK- 1087
Query: 537 GPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNGYRTLNFQAQVVQVHPSSV 596
+++R+ G D+ +RKA+C Y + A ++ G +HPSS
Sbjct: 1088 --IELRSCGP------DWDIVRKAICSAYFHNSA--RLKGVGEYVNCRTGMPCHLHPSSA 1137
Query: 597 LTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRW 632
L LG PDYVVYHEL+ T K +M+ SV+ W
Sbjct: 1138 LYG--LGYTPDYVVYHELILTTKEYMQCATSVEPHW 1171
>AT3G62310.1 | Symbols: | RNA helicase family protein |
chr3:23057516-23060561 REVERSE LENGTH=726
Length = 726
Score = 492 bits (1266), Expect = e-139, Method: Compositional matrix adjust.
Identities = 275/684 (40%), Positives = 411/684 (60%), Gaps = 47/684 (6%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL---------RRGFSKIAVTQ 53
TLP+ +E+ L+T+ N ++++GETGSGK+TQ+ Q ++ +R + TQ
Sbjct: 60 TLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQ 119
Query: 54 PXXXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELN 113
P +E+DV +GEEVGY+IRFED +SP T +KYLTDG+LLRE++A+P L
Sbjct: 120 PRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLE 179
Query: 114 EYDVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLS 173
Y VIILDEAHER+L TD+L GL+K ++K R +LK+++ SATL+ +K +F+ P++
Sbjct: 180 RYKVIILDEAHERTLATDVLFGLLKEVLKNRP-DLKLVVMSATLEAEKFQDYFSGAPLMK 238
Query: 174 IPGKLYPVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDK 233
+PG+L+PVEI Y++E +YLE+ ++T + IH EP GDIL+F+TG+++IE K+ +
Sbjct: 239 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 298
Query: 234 VRALEEGSCMDAI-IFPLHGSLPPELQVRVFSPPP-------PNCRRIIVATNIAETSLT 285
V L G + I + PL+ +LPP +Q ++F P P P R+I+V+TNIAETSLT
Sbjct: 299 VGNL--GDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLT 356
Query: 286 VDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRL 345
+DG+VYVID G+ KQ+ YNP + SL V ISK A+QR+GRAGRTRPGKC+RLY +
Sbjct: 357 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 416
Query: 346 FQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLID 405
F ++ T PEI RS+LA +VL LK L + D++ FDF+DPP+ E+L AL+ L +
Sbjct: 417 FNNDLQPQTYPEILRSNLANTVLTLKKLGID--DLVHFDFMDPPAPETLMRALEVLNYLG 474
Query: 406 AIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALLPGQRQS 465
A+D++G +T G M+E PL+P +++ LI + + C E L+V+AMLS + +
Sbjct: 475 ALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREAQ 534
Query: 466 KIEKKRKHPMPNLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRK 525
K + K G GDH+ LL +Y + +N+ D WC +N + R M +VR+
Sbjct: 535 KAADEAKARF-----GHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQ 589
Query: 526 QLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNGYRTLNFQ 585
QL +IM + +++ R Y N+RKA+ GY Q+A + G+
Sbjct: 590 QLVRIMSR-----FNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAH--LERTGHYLTVKD 642
Query: 586 AQVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRWTTTVMNKLKTLDV 645
QVV +HPS+ L P++V+Y+E V T + F+R V + W V +
Sbjct: 643 NQVVHLHPSNCLDHK-----PEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHY----- 692
Query: 646 YKLSGGINHAEEESERSLPDLPKK 669
Y LS N E++R + L KK
Sbjct: 693 YDLS---NFPNCEAKRVIEKLYKK 713
>AT2G47250.1 | Symbols: | RNA helicase family protein |
chr2:19399923-19402981 REVERSE LENGTH=729
Length = 729
Score = 487 bits (1254), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/685 (40%), Positives = 409/685 (59%), Gaps = 51/685 (7%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---------IAVTQP 54
LP+ ++ L T+ +N ++++GETGSGK+TQ+ Q +L + + TQP
Sbjct: 65 LPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQP 124
Query: 55 XXXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNE 114
E+DV +GEEVGY+IRFED TS T +KYLTDG+LLRE++A+P L
Sbjct: 125 RRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLER 184
Query: 115 YDVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSI 174
Y VIILDEAHER+L TD+L GL+K +++ R +LK+++ SATL+ +K ++F+ P++ +
Sbjct: 185 YKVIILDEAHERTLATDVLFGLLKEVLRNRP-DLKLVVMSATLEAEKFQEYFSGAPLMKV 243
Query: 175 PGKLYPVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKV 234
PG+L+PVEI Y++E +YLE+ ++T + IH EP GDIL+F+TG+++IE K+ +V
Sbjct: 244 PGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEV 303
Query: 235 RALEEGSCMDAI-IFPLHGSLPPELQVRVFSPPP-------PNCRRIIVATNIAETSLTV 286
L G + + + PL+ +LPP +Q ++F P P P R+I+V+TNIAETSLT+
Sbjct: 304 SNL--GDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTI 361
Query: 287 DGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLF 346
DG+VYVID G+ KQ+ YNP + SL V ISK A+QR+GRAGRTRPGKC+RLY + F
Sbjct: 362 DGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSF 421
Query: 347 QDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDA 406
++ T PEI RS+LA +VL LK L + D++ FDF+DPP+ E+L AL+ L + A
Sbjct: 422 NNDLQPQTYPEILRSNLANTVLTLKKLGID--DLVHFDFMDPPAPETLMRALEVLNYLGA 479
Query: 407 IDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALLPGQRQSK 466
+D+ G +T G M+E PL+P +S+ LI + + C E L+V+AMLS + + K
Sbjct: 480 LDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPREAQK 539
Query: 467 IEKKRKHPMPNLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQ 526
+ K G GDH+ LL +Y + +N+ D WC +N + R M +VR+Q
Sbjct: 540 AADEAKARF-----GHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQ 594
Query: 527 LSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLA--ERKMHHNGYRTLNF 584
L +IM + +++ R Y N+RKA+ GY Q+A ER H Y T+
Sbjct: 595 LVRIMSR-----FNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGH---YLTVK- 645
Query: 585 QAQVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRWTTTVMNKLKTLD 644
QVV +HPS+ L P++V+Y+E V T + F+R V + W V
Sbjct: 646 DNQVVHLHPSNCLDHK-----PEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHY---- 696
Query: 645 VYKLSGGINHAEEESERSLPDLPKK 669
Y LS N E++R+L L KK
Sbjct: 697 -YDLS---NFPNCEAKRALEKLYKK 717
>AT4G18465.1 | Symbols: | RNA helicase family protein |
chr4:10197056-10201611 FORWARD LENGTH=695
Length = 695
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/657 (38%), Positives = 395/657 (60%), Gaps = 47/657 (7%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK----IAVTQPXXXXX 59
LP+ +Y +IL VE + +++GETGSGK+TQ+ Q L G+++ IA TQP
Sbjct: 48 LPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAV 107
Query: 60 XXXXXXXXQELDVRLGEEVGYAIRFEDRT-SPTTRIKYLTDGVLLRESLANPELNEYDVI 118
+E+ V LGEEVGY IRFED T S T +K+LTDGVL+RE + +P L +Y VI
Sbjct: 108 QAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVI 167
Query: 119 ILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADC--------- 169
++DEAHERS++TDIL+GL+K+ ++ R L+++I+SAT++ +S FF
Sbjct: 168 MIDEAHERSISTDILLGLLKK-IQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGS 226
Query: 170 --------PVLSIPGKLYPVEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQD 221
+LS+ G+ + V+I Y +E +Y+ S + T L I+ REP GD+L+F+TGQ+
Sbjct: 227 TPGPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQE 286
Query: 222 DIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAE 281
DIE + LE++ + ++ S + PL+ L Q +F+P P R++I++TNIAE
Sbjct: 287 DIETAIKLLEEEAHSNQKNSS-GLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAE 345
Query: 282 TSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLY 341
TSLT++GVVYVIDSG+ KQ+ YNP S + SL V ISK A QR+GRAGR RPGKCYRLY
Sbjct: 346 TSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLY 405
Query: 342 PSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQL 401
F ++ +PE+QRS+L +V+ LK+L + +IL FD+ PPSSE++ AL+ L
Sbjct: 406 TEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGID--NILGFDWPAPPSSEAMIRALEVL 463
Query: 402 YLIDAIDENGAITS-IGRKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALLP 460
Y + +D++ +TS G ++AELPL+P +S+ ++ ++ GC E +T+AA+LS ++ +
Sbjct: 464 YSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWII 523
Query: 461 GQRQSKIEKKRKHPMPNLPDGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFV 520
+ K + + K L + GDH+ L +Y+ + + WC N L + M V
Sbjct: 524 ARGVQKEQDEAK-----LRFAAAEGDHVTFLNVYKGFLESKKPTQWCYKNFLNYQSMKKV 578
Query: 521 RDVRKQLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNG-Y 579
++R QL +I +++ + +++ D +RKA+ G+ + H NG Y
Sbjct: 579 VEIRDQLKRIARRLG---ITLKSCDG------DMEAVRKAVTAGFFANACRLEPHSNGVY 629
Query: 580 RTLNFQAQVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRWTTTV 636
+T+ ++ V +HPSSVL + P +VVY +V+T + +MRNV +++ W T V
Sbjct: 630 KTIR-GSEEVYIHPSSVLFRVN----PKWVVYQSIVSTERQYMRNVVTINPSWLTEV 681
>AT1G26370.1 | Symbols: | RNA helicase family protein |
chr1:9122030-9125368 REVERSE LENGTH=717
Length = 717
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 249/692 (35%), Positives = 398/692 (57%), Gaps = 85/692 (12%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK----IAVTQPXXXX 58
+LPI E++++E V+ N +++++GETGSGK+TQL Q L GF + I +TQP
Sbjct: 40 SLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCREGKMIGITQPRRIA 99
Query: 59 XXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVI 118
+E +V+LG++VGY+IRF+D TS +TR+KY+TDG+LLRE+L +P L+ Y VI
Sbjct: 100 AVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLREALLDPHLSRYSVI 159
Query: 119 ILDEAHERSLNTDILMGLMKRLVKLRS--------------------------------- 145
I+DEAH+RS++TD+L+ L+K++ + RS
Sbjct: 160 IVDEAHDRSVHTDVLLALLKKIQRTRSQPVSEKTEFGNVASQVQTTTRDANGPQQNGVLK 219
Query: 146 -------SNLKVLITSATLDGDKVSKFFADCPVLSIPGKLYPVEILYSKERPPNYLESCL 198
S LK++I SA+LD S++F + + G+ +PV+ILY+ +Y+++ L
Sbjct: 220 GYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYVDATL 279
Query: 199 KTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPEL 258
T IH E GDIL+F+TGQD+IE + ++++++ + E + + +LP E
Sbjct: 280 VTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDK-RKLLPLAIFSALPSEQ 338
Query: 259 QVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQIS 318
Q++VF+P P R++I+ATNIAETS+T+ G+ YVID G+VK R Y+PS GM SLDVV S
Sbjct: 339 QMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVVPAS 398
Query: 319 KVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDI 378
K Q QR+GRAGR PGK +RLYP R F ++ D T PEI+R +L+ +L LK+L +
Sbjct: 399 KAQTLQRSGRAGREGPGKSFRLYPEREF-EKLEDSTKPEIKRCNLSNIILQLKALGID-- 455
Query: 379 DILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITS-IGRKMAELPLEPSLSRTLIEAN 437
DI+ FDF+D PS ++ AL +L+ + A+ ++G + + +G +M+ LPLEP S+ LI AN
Sbjct: 456 DIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILAN 515
Query: 438 NYGCITEALTVAAMLSAETALL-PGQRQSKIEKKRKHPMPNLPDGSGLGDHIQLLQIYEC 496
+ C+ E L A+LS E+ P +++ + + H S GDH+ L +Y
Sbjct: 516 QFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNH------FASVEGDHLTYLSVYRE 569
Query: 497 WDR-----------NDYD---IGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKGPLDIR 542
D N+ D WCK+N + R + RD+ +Q+ + +++I ++
Sbjct: 570 SDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIG---FNVS 626
Query: 543 AHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNGYRTLNFQAQVVQVHPSSVLTADDL 602
+ GN D R+ L + + A+R++ YR L +VV +HP+SVL
Sbjct: 627 SCGN------DMLAFRRCLAASFFLKAAQRQL-DGTYRALE-SGEVVHIHPTSVL----F 674
Query: 603 GKFPDYVVYHELVATPKPFMRNVCSVDMRWTT 634
P+ V+++EL+ T K +++N+ +D W +
Sbjct: 675 RAKPECVIFNELMQTSKKYIKNLTIIDSLWLS 706
>AT4G16680.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:9388613-9390774
REVERSE LENGTH=656
Length = 656
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/415 (49%), Positives = 282/415 (67%), Gaps = 13/415 (3%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---IAVTQPXXXXXX 60
LPI Y E++L+ +E N V+V++GETGSGK+TQ+ Q L G++K I TQP
Sbjct: 215 LPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAM 274
Query: 61 XXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVIIL 120
QE+ V+LG EVGY+IRFED TS T IKY+TDG+LLRE L P+L+ Y VII+
Sbjct: 275 SVASRVAQEVGVKLGHEVGYSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIII 334
Query: 121 DEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLYP 180
DEAHER+L+TDIL L+K + K+R +L+++I+SATL+ K S++F + IPG+ YP
Sbjct: 335 DEAHERTLSTDILFALVKDVAKVRP-DLRLIISSATLEAKKFSEYFDSARIYLIPGRRYP 393
Query: 181 VEILYSKERPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRAL-EE 239
VE L+ K P+YLE+ ++T + IH E GDIL+F+TGQ++IE + + L+ ++ L +
Sbjct: 394 VEKLFRKCPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTK 453
Query: 240 GSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVK 299
GS + II P++ +LP LQ +VF P P R++++ATNIAETSLT+DGV YVID GY K
Sbjct: 454 GS--EIIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCK 511
Query: 300 QRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQ 359
YNP +GM SL V ISK A QRAGR+GRT PGKC+RLY + + T+PEIQ
Sbjct: 512 INSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYNIK----DLEPTTIPEIQ 567
Query: 360 RSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAIT 414
R++LA VL LKSL + D+ FDF+DPP +L AL+ LY + A+DE G IT
Sbjct: 568 RANLASVVLTLKSLGIQ--DVFNFDFMDPPPENALLKALELLYALGALDEIGEIT 620
>AT4G01020.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr4:439086-445043 FORWARD LENGTH=1787
Length = 1787
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 332/649 (51%), Gaps = 45/649 (6%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFS---KIAVTQPXXXXXX 60
LPI Y +IL+ + ++V+IGETGSGKSTQL Q L G + I TQP
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 61 XXXXXXXQELDVRLGEE-VGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVII 119
+E E V F ++++ Y+TD LL+ + + L+ +I
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 120 LDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLY 179
+DEAHERSLNTD+L+ + R + R +L+++I SAT D +++S++ DC +L + G+ +
Sbjct: 423 IDEAHERSLNTDLLL-ALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNF 481
Query: 180 PVEILYSKE---------RPPNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKL 230
PVEI+YS R +Y +K A++IH E EG IL F+T Q ++E
Sbjct: 482 PVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVE------ 535
Query: 231 EDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVV 290
A E AI PLHG L E Q VF P R++I ATNIAETSLT+ GV
Sbjct: 536 ----WACERFVAPSAIALPLHGKLSFEEQFMVFQNYPGR-RKVIFATNIAETSLTIPGVK 590
Query: 291 YVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEF 350
YVIDSG VK+ +Y P +GM L V Q+S+ A QRAGRAGRT PG+CYRLY F
Sbjct: 591 YVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMN 650
Query: 351 LDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDA-IDE 409
L+ PEI+R L ++L + +L + +I F+F+D P E++ A++ L + A +++
Sbjct: 651 LNQE-PEIRRVHLGVALLRMLALGID--NIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707
Query: 410 NGA--ITSIGRKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALLPGQRQSKI 467
NG +T G + +L LEP L + ++ + E + +AA+++ +++ R
Sbjct: 708 NGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFC--RVGNF 765
Query: 468 EKKRKHPMPNLPDGSGLGDHIQLLQIYECWDR--NDYDIGWCKDNGLQVRGMLFVRDVRK 525
+ K K + + GD LL +Y+ W D WC +N L + M D K
Sbjct: 766 DDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVK 825
Query: 526 QLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNGYRTLNFQ 585
+L +++ N +E + + L+ + LAE + GY L ++
Sbjct: 826 ELEICIERELTLVSPSYWVWNPNEGTKHDKYLKMVILAS----LAENVAMYTGYDQLGYE 881
Query: 586 ----AQVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDM 630
+Q VQ+HPS L A G+ P +VV+ EL++ ++ V + D
Sbjct: 882 VALTSQQVQLHPSCSLLA--FGQKPSWVVFGELLSIVDQYLVCVTAFDF 928
>AT5G10370.1 | Symbols: | helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
| chr5:3261245-3267188 FORWARD LENGTH=1775
Length = 1775
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 221/653 (33%), Positives = 335/653 (51%), Gaps = 53/653 (8%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFS---KIAVTQPXXXXXX 60
LPI Y +IL+ + ++V+IGETGSGKSTQL Q L G + I TQP
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 61 XXXXXXXQELDVRLGEE-VGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYDVII 119
+E E V F ++++ Y+TD LL+ + + L+ +I
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 120 LDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPGKLY 179
+DEAHERSLNTD+L+ L+K+L+ R +L+++I SAT D ++S++F C +L + G+ +
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLS-RRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNF 484
Query: 180 PVEILYSKERP---------PNYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKL 230
PVEI+YS +Y+ +K A++IH E EG IL F+T Q ++E
Sbjct: 485 PVEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVE------ 538
Query: 231 EDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVV 290
A E AI PLHG L E Q RVF P R++I ATNIAETSLT+ GV
Sbjct: 539 ----WACERFITPSAIALPLHGKLSFEEQFRVFQNHPGR-RKVIFATNIAETSLTIPGVK 593
Query: 291 YVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEF 350
YVIDSG VK+ +Y P +GM L V ++S+ A QRAGRAGRT PG+CYRLY F
Sbjct: 594 YVIDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDSMN 653
Query: 351 LDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDA-IDE 409
L+ PEI+R L V L+ L L +I +F+F+D P E++ A++ L + A +++
Sbjct: 654 LNQE-PEIRRVHLG--VALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEK 710
Query: 410 NGA--ITSIGRKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALLPGQRQSKI 467
NG +T G + +L LEP L + ++ + E + +AA+++ +++ R
Sbjct: 711 NGVHELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFC--RVGNF 768
Query: 468 EKKRKHPMPNLPDGSGLGDHIQLLQIYECWD------RNDYDIGWCKDNGLQVRGMLFVR 521
+ K K + + GD LL +Y+ W RN WC +N L + M
Sbjct: 769 DDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNK----WCWENSLNAKSMRRCE 824
Query: 522 DVRKQLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCVGYANQLAERKMHHNGYRT 581
D K+L +++ N +E + ++L+ + LAE + GY
Sbjct: 825 DTVKELEICIERELTLVSPSYWVWNPNEGTKHDKHLKMVILAS----LAENVAMYTGYNQ 880
Query: 582 LNFQ----AQVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMRNVCSVDM 630
L ++ Q VQ+HPS L A G+ P +VV+ EL++ ++ V + D
Sbjct: 881 LGYEVALTGQQVQLHPSCSLLA--FGQKPSWVVFGELLSIVDQYLVCVTACDF 931
>AT1G58050.1 | Symbols: | RNA helicase family protein |
chr1:21478590-21487839 REVERSE LENGTH=1417
Length = 1417
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 177/627 (28%), Positives = 294/627 (46%), Gaps = 96/627 (15%)
Query: 2 ATLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL-------RRGFSKIAVTQP 54
A LPI + ++ IL+ ++ V+VV GETGSGK+TQ+ Q +L G+ I TQP
Sbjct: 595 AALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQP 654
Query: 55 XXXXXXXXXXXXXQELDVRLGEEV-GYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELN 113
E V Y +R ++ S TR+ + T G+LLR+ + + L
Sbjct: 655 RAITVAQRVADERCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVGDTTLK 714
Query: 114 EYDVIILDEAHERSLNTDILMGLMKRLVKLRSSN-----LKVLITSATLDGDKVSKFFAD 168
+ II+DE HERSL D L+ ++K L++ +S + LKV++ SAT+D + S++F
Sbjct: 715 DVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFSRYFGQ 774
Query: 169 CPVLSIPGKLYPVEILYSK---ERPPNYLESCLKTALDIHT---------REPEGDILIF 216
CP+++ G+ +PV + + ER L S AL T P G +
Sbjct: 775 CPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNVPRGKKNLM 834
Query: 217 MTGQDD----------------------------IEKLVSKLEDKVRALEEGSCMDAI-- 246
+ G D +E+L+ ++D EEG+ + +
Sbjct: 835 LAGWGDSYLVSEDSLNTSYDSIKYIASAVVDYDLLEELICHIDD---TCEEGAILVFLPG 891
Query: 247 ------------------------IFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAET 282
+ PLH S+ Q +VF PP R++I+ATNIAET
Sbjct: 892 MSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKVIIATNIAET 951
Query: 283 SLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYP 342
S+T++ VVYVIDSG K+ +YNP + S+ +SK A QR GRAGR +PG C+ LY
Sbjct: 952 SITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVKPGHCFSLYT 1011
Query: 343 SRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLY 402
F+ VPE+ R L L++K L L I L+PPS ++ A+ L+
Sbjct: 1012 RHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSKALEPPSESAINSAILLLH 1071
Query: 403 LIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEALTVAAMLS-AETALLPG 461
+ A++ + +T +G +A+LP++ + + L+ +GC++ L++AA LS ++ +
Sbjct: 1072 KVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYA 1131
Query: 462 QRQSKIEK-------KRKHPMPNLPDGSGLGDHIQLLQIYECWDRNDYDIG------WCK 508
+ + +++ + NL + DH+ ++ YE W R ++ G +C+
Sbjct: 1132 KDEQNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCE 1191
Query: 509 DNGLQVRGMLFVRDVRKQLSQIMQKIA 535
L M +R+ R + ++ I
Sbjct: 1192 SKFLNSSVMRMMRERRVEFGMLLADIG 1218
>AT2G35920.1 | Symbols: | RNA helicase family protein |
chr2:15075674-15080506 FORWARD LENGTH=995
Length = 995
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 226/427 (52%), Gaps = 20/427 (4%)
Query: 208 EPEGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPP 267
E G IL+F+TG D+I KL+ K+ G ++ PLHGS+P Q +F PP
Sbjct: 501 EGGGAILVFLTGWDEISKLLEKINMNNFL---GDSSKFLVLPLHGSMPTVNQREIFDRPP 557
Query: 268 PNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAG 327
PN R+I++ATNIAE+S+T+D VVYV+D G K+ Y+ + + L ISK A+QR G
Sbjct: 558 PNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRG 617
Query: 328 RAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLD 387
RAGR + G CYRLYP ++ D F +PEI R+ L L++KSL + I L
Sbjct: 618 RAGRVQAGVCYRLYPKVIY-DAFPQYQLPEIIRTPLQELCLHIKSLQVGSIGSFLAKALQ 676
Query: 388 PPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEALT 447
PP + ++++A++ L I A+++ +T +GR + LP++P++ + L+ + C+ ALT
Sbjct: 677 PPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQCVNPALT 736
Query: 448 VAAMLSAETAL-LPGQRQSKIEKKRKHPMPNLPDGSGLGDHIQLLQIYECW---DRNDYD 503
+AA L+ + LP R+ + ++ +++ G DHI LL+ YE + R +
Sbjct: 737 IAAALAYRSPFVLPLNRKEEADEAKRYFA-----GDSCSDHIALLKAYEGYRDAKRGGNE 791
Query: 504 IGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCV 563
+C N L + + D+R Q ++ I G +D +++ D + LC
Sbjct: 792 KDFCWQNFLSPVTLRMMEDMRNQFLDLLSDI--GFVDKSKPNAYNQYSYDMEMISAVLCA 849
Query: 564 GYANQLAERKMHHNGYRTLNFQAQV--VQVHPSSVLTADDLGKFPDYVVYHELVATPKPF 621
G + + K G RT + ++ V +HP SV +L P Y+VY E V T +
Sbjct: 850 GLYPNVVQCK--RRGKRTAFYTKELGKVDIHPGSVNARVNLFSLP-YLVYSEKVKTTSVY 906
Query: 622 MRNVCSV 628
+R+ ++
Sbjct: 907 IRDSTNI 913
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 8/189 (4%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFS-------KIAVTQPXX 56
LP + +E+ L +V N V+VV GETG GK+TQL Q +L S I TQP
Sbjct: 228 LPAFKMKEEFLNSVSQNQVLVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRR 287
Query: 57 XXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEYD 116
E +GE VGY IR E + S TR+ + T GVLLR + +P L
Sbjct: 288 ISAISVASRISAERGESIGESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVS 347
Query: 117 VIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIPG 176
+++DE HER +N D L+ +++ L+ R +L++++ SAT++ D S +F + P + IPG
Sbjct: 348 HLLVDEIHERGMNEDFLLIILRDLLP-RRPDLRLILMSATINADMFSTYFGNSPTMHIPG 406
Query: 177 KLYPVEILY 185
+PV L+
Sbjct: 407 FTFPVAELF 415
>AT2G01130.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:88847-94635 REVERSE LENGTH=1113
Length = 1113
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 216/435 (49%), Gaps = 28/435 (6%)
Query: 203 DIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPELQVRV 262
+I E G ILIF+TG DDI L KL+ + + G+ ++ HGS+ Q +
Sbjct: 491 NICENEGPGGILIFLTGWDDISSLKEKLQ--IHPIF-GNPDLVMLLACHGSMETFEQRLI 547
Query: 263 FSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQA 322
F P R+I++ATNIAETS+T++ V +VID G K+ Y+ + L ISKV A
Sbjct: 548 FEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSA 607
Query: 323 NQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILK 382
QR GRAGR RPG+CY LYP ++ D F + +PEI R+ L L +KSL+L I
Sbjct: 608 QQRRGRAGRVRPGQCYHLYPKCVY-DAFAEYQLPEILRTPLHSLCLQIKSLNLGSISEFL 666
Query: 383 FDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCI 442
L P ++Q A+ L +I A+DEN +T++GR +++LP+EP L + LI GC+
Sbjct: 667 SRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCL 726
Query: 443 TEALTVAAMLSAETALLPGQRQSKIEKKRKHPMPNLPDGSGLGDHIQLLQIYECWDRND- 501
LTVAA LS L Q + + + K D S DH+ L++ YE W + +
Sbjct: 727 DPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSR--DHS---DHLALVRAYEGWKKAEE 781
Query: 502 ----YDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQK---IAKGPLDIRAHGNGDEFRRDY 554
YD +C N L ++ + + +RK+ +++ I P + GN D
Sbjct: 782 ESAVYD--YCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGN------DA 833
Query: 555 RNLRKALCVGYANQLAERKMHHNGYRTLNFQAQVVQVHPSSVLTADDLGKFPDYVVYHEL 614
R +C G + + + + V ++ +S + +P ++V++E
Sbjct: 834 NLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYP-WLVFNEK 892
Query: 615 VATPKPFMRN--VCS 627
+ F+R+ CS
Sbjct: 893 IKVNSVFLRDSTACS 907
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 2 ATLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL-------RRGFSKIAVTQP 54
+LP + +L + N V+V+ GETG GK+TQ+ Q +L R FS I TQP
Sbjct: 218 TSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQFILESEIEANRGAFSSIICTQP 277
Query: 55 XXXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNE 114
E +LGE VGY +R E TR+ + T G+LLR L + L
Sbjct: 278 RRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDTRLLFCTTGILLRRLLVDRNLRG 337
Query: 115 YDVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSI 174
+I+DE HER +N D L+ ++K L+ R S LK+++ SATLD + S +F V+ I
Sbjct: 338 VTHVIVDEIHERGMNEDFLLIILKDLLS-RRSELKLILMSATLDAELFSSYFGGAGVIYI 396
Query: 175 PGKLYPV 181
PG YPV
Sbjct: 397 PGFTYPV 403
>AT1G33390.1 | Symbols: ATFAS4, FAS4 | RNA helicase family protein |
chr1:12099738-12104108 REVERSE LENGTH=1237
Length = 1237
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 224/452 (49%), Gaps = 64/452 (14%)
Query: 247 IFPLHGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPS 306
+ PL+ L P Q+RVF R ++VATN+AETSLT+ G+ YV+D+G VK + Y+
Sbjct: 649 VLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSK 708
Query: 307 SGMYSLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGS 366
+GM S +V IS+ A+QRAGRAGRT PG CYRLY S +F + F + ++PEI + + G
Sbjct: 709 TGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGV 768
Query: 367 VLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLE 426
+L +KS+++P ++ F F PP ++++A + L ++A+D NG +T +G+ M+ P+
Sbjct: 769 ILLMKSMNIPKVE--NFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPMS 826
Query: 427 PSLSRTLI-------EANNYGCITEALTVAAMLSAETAL-------LPGQRQSKI----- 467
P SR L+ E NY L A A +L G+++++
Sbjct: 827 PRHSRMLLTVIQMLKETRNYSRANLILGYAVAAVAALSLPNPLIMEFEGEKKNESKDADK 886
Query: 468 ---------EKKRKHPMPNLPD--GSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRG 516
+K RK + D + D + + ++ ++ +G+C+ NGL ++
Sbjct: 887 TVKQEDKQRKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKT 946
Query: 517 MLFVRDVRKQLSQIMQKIAKGPLDIR-----AHGNGDEFRRDYRN--------------- 556
M + ++ QL +++ K P + HG + + +R
Sbjct: 947 MDEMSKLKDQLLRLVFNCCK-PSETEDSFSWTHGTIQDVEKSWRITTSTSSKTPLLQNEE 1005
Query: 557 --LRKALCVGYANQLAERKMHHNGYRTLNFQAQVVQVHPSSVLTADDLGKFPDYVVYHEL 614
L +A+C G+A+++A RK Y+ Q V SS++ + P+ +VY EL
Sbjct: 1006 ELLGEAICAGWADRVA-RKTRATEYQACAVQEPVFLHRWSSLINS-----APELLVYSEL 1059
Query: 615 VATPKPFMRNVCSVDMRWTTTVMNKLKTLDVY 646
+ T +P+M V W ++ K+L V+
Sbjct: 1060 LLTNRPYMHGATRVRPEW---LVKHAKSLCVF 1088
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 151/270 (55%), Gaps = 36/270 (13%)
Query: 4 LPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSK---------IAVTQP 54
LPIV E++I+E + +P V++ G+TG GK+TQ+ Q L GF I +TQP
Sbjct: 241 LPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSGIIGITQP 300
Query: 55 XXXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNE 114
EL VRLG+EVG+ +R++ + + IK++TDG+LLRE + L
Sbjct: 301 RRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQNDFLLRR 360
Query: 115 YDVIILDEAHERSLNTDILMGLMKRLVKLRS----------------------SNLKVLI 152
Y VIILDEAHERSLNTDIL+G++ R++K+R + LK+++
Sbjct: 361 YSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQSGGTVTSECQITPLKLIL 420
Query: 153 TSATLD-GDKVS--KFFADC-PVLSIPGKLYPVEILYSKERP-PNYLESCLKTALDIHTR 207
SATL D VS + F + P++ +P + YPV I +SK+ +Y+ K + IH +
Sbjct: 421 MSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVMSIHKK 480
Query: 208 EPEGDILIFMTGQDDIEKLVSKLEDKVRAL 237
P+G IL+F+TGQ +++ L KL + L
Sbjct: 481 LPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
>AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120585-13126635 REVERSE LENGTH=1299
Length = 1299
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 186/367 (50%), Gaps = 27/367 (7%)
Query: 210 EGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFP---LHGSLPPELQVRVFSPP 266
+G IL+F+ G DDI K + R LE D+ F LH +P Q +VF+ P
Sbjct: 551 DGAILVFLPGWDDINKT------RQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRP 604
Query: 267 PPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRA 326
PP CR+I++ATNIAE+++T+D VVYVIDSG +K++ Y+P + + +L +SK A QR
Sbjct: 605 PPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQ 664
Query: 327 GRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKF--D 384
GRAGR +PG CY LY SRL D VPEI+R + L +K LD P+ F
Sbjct: 665 GRAGRCQPGICYHLY-SRLRAASMPDFKVPEIKRMPVEELCLQVKILD-PNCKTNDFLQK 722
Query: 385 FLDPPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITE 444
LDPP +S+ +AL L I A+ +T +G K LP+ P +S+ L A C+
Sbjct: 723 LLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDP 782
Query: 445 ALTVA-AMLSAETALLPGQRQSKIEKKRKHPMPNLPDG--SGLGDHIQLLQIYECWDRND 501
ALT+A A E +P S +E+++ G DH+ ++ +ECW +N
Sbjct: 783 ALTLACAADYKEPFTMP---MSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECW-KNA 838
Query: 502 YDIG----WCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNL 557
G +C + M + +R QL +++ P DI + RD L
Sbjct: 839 KGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPNDISSCSQNS---RDPGIL 895
Query: 558 RKALCVG 564
R L VG
Sbjct: 896 RAVLAVG 902
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 116/213 (54%), Gaps = 15/213 (7%)
Query: 2 ATLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL------RRGFSKIAVTQPX 55
+ LPI +++ I VE+N V+++ GETG GK+TQ+ Q LL +R KI TQP
Sbjct: 185 SKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPR 244
Query: 56 XXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLAN---PEL 112
E +GE +GY +R + + + + + T+G+LLR + +
Sbjct: 245 RISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSV 304
Query: 113 NEYDVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVL 172
++ II+DE HER +D ++ +++ L+ + +L++++ SATLD ++ S +F CPV+
Sbjct: 305 SDITHIIVDEIHERDCYSDFMLAIIRDLLP-SNPHLRLILMSATLDAERFSGYFGGCPVV 363
Query: 173 SIPGKLYPVEILYSKERPPNYLESCLKTALDIH 205
+PG YPV LY ++ + S LK+ D H
Sbjct: 364 RVPGFTYPVRTLYLED-----VLSILKSGGDNH 391
>AT1G58060.1 | Symbols: | RNA helicase family protein |
chr1:21489480-21501775 REVERSE LENGTH=1459
Length = 1459
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 222/465 (47%), Gaps = 50/465 (10%)
Query: 210 EGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPPPN 269
EG ILIF+ G +I L+ L R G D ++ PLH S+ Q +VF PP
Sbjct: 915 EGAILIFLPGVAEIYMLLDMLAASYRF--RGPAADWLL-PLHSSIASSEQRKVFLRPPKG 971
Query: 270 CRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGRA 329
R++I ATNIAETS+T+D VVYVIDSG K+ +YNP + S+ IS+ A QR GRA
Sbjct: 972 LRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRA 1031
Query: 330 GRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLDPP 389
GR +PG C+ LY F+ VPE+ R L L +K L L I L+PP
Sbjct: 1032 GRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSRALEPP 1091
Query: 390 SSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEALTVA 449
S ++ A+ L+ + A++ + +T +G +A+LP++ + + L+ +GC++ L++A
Sbjct: 1092 SEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIA 1151
Query: 450 AMLSAETALL-PGQRQSKIEKKRKHPM-------PNLPDGSGLGDHIQLLQIYECWDRND 501
A LS ++ + P + +++ + + +L + DH+ ++ Y+ W +
Sbjct: 1152 AFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDKWVKIL 1211
Query: 502 YDIG------WCKDNGLQVRGMLFVRDVRKQLSQIMQKIA------KGPLDIRAHGNGDE 549
+ G +C+ L M +RD+R Q ++ I G R N D
Sbjct: 1212 QERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKKENLDV 1271
Query: 550 FRRD-------YRN----LRKALCVG-YANQLAERK---------MHHNGYRTLNFQA-- 586
+ D Y ++ LC G Y N A K + G +T ++ A
Sbjct: 1272 WFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWY 1331
Query: 587 ---QVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMRNVCSV 628
+ V +HPSS+ + + P ++V+ E V T K ++R+ V
Sbjct: 1332 DGRREVHIHPSSINSNFKAFQNP-FLVFLEKVETNKVYLRDTTIV 1375
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 24/214 (11%)
Query: 2 ATLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL-------RRGFSKIAVTQP 54
LPI + + IL+ ++ V+VV GETGSGK+TQ+ Q +L G+ I TQP
Sbjct: 612 TALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQP 671
Query: 55 XXXXXXXXXXXXXQE-------LDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESL 107
E LD L VGY +R E S TR+ + T G+LLR+
Sbjct: 672 RRIAAISVAQRVADERCESSPGLDDSL---VGYQVRLESARSDKTRLLFCTTGILLRKLA 728
Query: 108 ANPELNEYDVIILDEAHERSLNTDILMGLMKRLVKLRSSN-----LKVLITSATLDGDKV 162
+ LN+ II+DE HERSL D L+ ++K L++ +S + LKV++ SAT+D D
Sbjct: 729 GDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLF 788
Query: 163 SKFFADCPVLSIPGKLYPVEILYSKE--RPPNYL 194
S++F CPV++ G+ +PV + +E NYL
Sbjct: 789 SRYFGHCPVITAQGRTHPVTTHFLEEIYESINYL 822
>AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase |
chr1:2040567-2047333 FORWARD LENGTH=1576
Length = 1576
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 166/296 (56%), Gaps = 19/296 (6%)
Query: 210 EGDILIFMTGQDDIEKLVSKL-EDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPPP 268
+G IL+F+ G ++I K KL +D+ A II LH +P E Q +VF+ PP
Sbjct: 575 DGAILVFLPGWEEISKTKEKLLDDRFFA----HSAKFIILCLHSRVPAEEQKKVFNRPPR 630
Query: 269 NCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAGR 328
CR+I++ATNIAE+++T+D VVYVIDSG +K++ Y+P + + +L +SK A QRAGR
Sbjct: 631 GCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGR 690
Query: 329 AGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKF--DFL 386
AGR + G CY LY S+L + VPE+ R + L +K LD P+ ++ F +
Sbjct: 691 AGRCQAGICYHLY-SKLRAASLPEYRVPEVMRMPVDELCLQVKMLD-PNCNVNDFLQKLM 748
Query: 387 DPPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEAL 446
DPP ++S+++AL L I A+ +T +G+K +LP+ P +S+ + A C+ AL
Sbjct: 749 DPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILVNCLDPAL 808
Query: 447 TVAAMLSAE----TALLPGQRQSKIEKKRKHPMPNL-PDGSGLGDHIQLLQIYECW 497
+A + L PG R K KH + +L D S DH+ + ++CW
Sbjct: 809 ILACAADEKDPFTMPLSPGDR--KKAAAAKHELASLYGDHS---DHLATVAAFQCW 859
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 105/193 (54%), Gaps = 10/193 (5%)
Query: 2 ATLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL------RRGFSKIAVTQPX 55
+ LPI + + I+ VE+N VV++ GETG GK+TQ+ Q LL ++ KI TQP
Sbjct: 215 SKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKKEACKIICTQPR 274
Query: 56 XXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLA---NPEL 112
E +G VGY +R + + + + T+G+LLR + N +
Sbjct: 275 RISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLRVLIGKGVNSSV 334
Query: 113 NEYDVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVL 172
+ II+DE HER +D ++ +++ L+ + +L++++ SATLD ++ S++F CPV+
Sbjct: 335 PDITHIIVDEIHERDSYSDFMLMILRDLLP-SNPHLRLILMSATLDAERFSEYFGGCPVV 393
Query: 173 SIPGKLYPVEILY 185
+PG YPV +
Sbjct: 394 RVPGFTYPVRTFF 406
>AT1G48650.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989670-17995169 REVERSE LENGTH=1197
Length = 1197
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 206/425 (48%), Gaps = 18/425 (4%)
Query: 208 EPEGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPP 267
E G +L+FMTG DDI L ++LE G ++ HGS+ Q +F PP
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQLEAHSLL---GDPNKVLLLACHGSMASSEQRLIFDRPP 632
Query: 268 PNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAG 327
R+I++ATN+AETS+T++ VVYVID G K+ Y+ + L ISK A QR G
Sbjct: 633 EGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRG 692
Query: 328 RAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLD 387
RAGR PG+CY LYP R + F D PE+ R+ L L +KSL L I L
Sbjct: 693 RAGRVMPGECYHLYP-RCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 388 PPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEALT 447
PP + S+Q+A++ L +I A+D++ +T +G+ ++ LP+EP L + LI + C+ +T
Sbjct: 752 PPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMT 811
Query: 448 VAAMLSA-ETALLPGQRQSKIEKKRKHPMPNLPDGSGLGDHIQLLQIYECW---DRNDYD 503
V A LS + L+P ++ E R G DH+ L++ Y W +R
Sbjct: 812 VVAGLSVRDPFLMPFDKKDLAETARSK-----FSGRDYSDHLTLVRAYNGWKDAERTHSG 866
Query: 504 IGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCV 563
+C N L + + + +RKQ ++++ + I + D +R +C
Sbjct: 867 YDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASL----IDNIEGCSKLSHDEHLVRAIICA 922
Query: 564 GYANQLAERKMHHNGYRTLNFQAQVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMR 623
G + + V ++ SSV + FP ++V+++ V F+R
Sbjct: 923 GMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFP-WLVFNDKVKVNSVFLR 981
Query: 624 NVCSV 628
+ +V
Sbjct: 982 DSTAV 986
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL-------RRGFSKIAVTQPX 55
TLP + ++ +L+ + AN VVVV GETG GK+TQL Q +L R I TQP
Sbjct: 298 TLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPR 357
Query: 56 XXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEY 115
E ++GE VGY +R E TR+ + T GVLLR L + L
Sbjct: 358 RISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGV 417
Query: 116 DVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIP 175
+++DE HER +N D L+ ++K L+ R +LK+++ SATL+ + S +F P + IP
Sbjct: 418 THVVVDEIHERGMNEDFLLIVLKDLLP-RRPDLKLILMSATLNAELFSSYFGGAPAMHIP 476
Query: 176 GKLYPVEILYSKERPPNYLESCLKTA 201
G YPV ++LE L+T+
Sbjct: 477 GFTYPVR--------AHFLEDYLETS 494
>AT1G48650.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:17989517-17995169 REVERSE LENGTH=1206
Length = 1206
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 206/425 (48%), Gaps = 18/425 (4%)
Query: 208 EPEGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPELQVRVFSPPP 267
E G +L+FMTG DDI L ++LE G ++ HGS+ Q +F PP
Sbjct: 576 ERPGAVLVFMTGWDDINSLKNQLEAHSLL---GDPNKVLLLACHGSMASSEQRLIFDRPP 632
Query: 268 PNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQISKVQANQRAG 327
R+I++ATN+AETS+T++ VVYVID G K+ Y+ + L ISK A QR G
Sbjct: 633 EGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRG 692
Query: 328 RAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYLKSLDLPDIDILKFDFLD 387
RAGR PG+CY LYP R + F D PE+ R+ L L +KSL L I L
Sbjct: 693 RAGRVMPGECYHLYP-RCVYEAFADYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQ 751
Query: 388 PPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLSRTLIEANNYGCITEALT 447
PP + S+Q+A++ L +I A+D++ +T +G+ ++ LP+EP L + LI + C+ +T
Sbjct: 752 PPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMT 811
Query: 448 VAAMLSA-ETALLPGQRQSKIEKKRKHPMPNLPDGSGLGDHIQLLQIYECW---DRNDYD 503
V A LS + L+P ++ E R G DH+ L++ Y W +R
Sbjct: 812 VVAGLSVRDPFLMPFDKKDLAETARSK-----FSGRDYSDHLTLVRAYNGWKDAERTHSG 866
Query: 504 IGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKGPLDIRAHGNGDEFRRDYRNLRKALCV 563
+C N L + + + +RKQ ++++ + I + D +R +C
Sbjct: 867 YDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASL----IDNIEGCSKLSHDEHLVRAIICA 922
Query: 564 GYANQLAERKMHHNGYRTLNFQAQVVQVHPSSVLTADDLGKFPDYVVYHELVATPKPFMR 623
G + + V ++ SSV + FP ++V+++ V F+R
Sbjct: 923 GMFPGVCSVVNKEKSITLKTMEDGQVLLYSSSVNGNVPMIPFP-WLVFNDKVKVNSVFLR 981
Query: 624 NVCSV 628
+ +V
Sbjct: 982 DSTAV 986
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 108/206 (52%), Gaps = 16/206 (7%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL-------RRGFSKIAVTQPX 55
TLP + ++ +L+ + AN VVVV GETG GK+TQL Q +L R I TQP
Sbjct: 298 TLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPR 357
Query: 56 XXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEY 115
E ++GE VGY +R E TR+ + T GVLLR L + L
Sbjct: 358 RISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLKGV 417
Query: 116 DVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIP 175
+++DE HER +N D L+ ++K L+ R +LK+++ SATL+ + S +F P + IP
Sbjct: 418 THVVVDEIHERGMNEDFLLIVLKDLLP-RRPDLKLILMSATLNAELFSSYFGGAPAMHIP 476
Query: 176 GKLYPVEILYSKERPPNYLESCLKTA 201
G YPV ++LE L+T+
Sbjct: 477 GFTYPVR--------AHFLEDYLETS 494
>AT2G47680.1 | Symbols: | zinc finger (CCCH type) helicase family
protein | chr2:19545828-19550871 REVERSE LENGTH=1015
Length = 1015
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 247/502 (49%), Gaps = 65/502 (12%)
Query: 1 MATLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLLRRGFSKIAVTQPXXXXXX 60
A+LPI+ + +I++ + N V +++GE G GKS+Q+ Q LL + I TQP
Sbjct: 23 FASLPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLLEANMAPILCTQPRRFAVV 82
Query: 61 XXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELN--EYDVI 118
+ + LG E+GY I + ++I + T GVLL E L + LN +Y VI
Sbjct: 83 AVAKMVAKSRNSDLGGEIGYHIGHSKILTEGSKILFKTAGVLLDEML-DKGLNALKYKVI 141
Query: 119 ILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFAD------CPVL 172
ILDE HERS+ +D+++ +K+ + +++++L+V++ SAT D + +F + V+
Sbjct: 142 ILDEVHERSVESDLVLVCVKQFL-MKNNDLRVVLMSATADITRYRDYFKELGRGERVEVV 200
Query: 173 SIPG----KLYPVEILYSKERP-----------------PNYLESCLKTALD-------- 203
+IP ++ +LY ++ P+ ++ +K L
Sbjct: 201 AIPSPDQRTIFQRRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNLIHDLIL 260
Query: 204 -IHTREP--EGDILIFMTGQDDIEKLVSKLEDKVRALEEGSCMDAIIFPLHGSLPPELQV 260
IH +EP E IL+F+ +E+ +LE + E + LH S+ E +
Sbjct: 261 YIHEKEPDIEKSILVFLPTYYSLEQQYHQLEPFFASFE--------VHILHRSIDTEQAL 312
Query: 261 RVFSPPPPNC---RRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMYSLDVVQI 317
C R++I+ATNIAE+S+T+ V YVIDS Q ++PS ++ +V +
Sbjct: 313 AAMK----ICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQLVWV 368
Query: 318 SKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYL---KSLD 374
S+ QA QR GR GRT G+ YRL PS F ++ + P I + SL VL++ +S
Sbjct: 369 SRSQAEQRRGRTGRTCDGEVYRLVPSAFF-NKLEEHEPPSILKLSLRQQVLHICCTESRA 427
Query: 375 LPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENG----AITSIGRKMAELPLEPSLS 430
+ D + L +DPP + + DAL+ L I A+ ++ T GR +A PL S
Sbjct: 428 INDANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFDAS 487
Query: 431 RTLIEANNYGCITEALTVAAML 452
+++ G + + + + ++
Sbjct: 488 ILVVKFGEMGMLRQGILLGVLM 509
>AT5G04895.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:1428796-1434516 FORWARD LENGTH=1161
Length = 1161
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 177/346 (51%), Gaps = 16/346 (4%)
Query: 192 NYLESCLKTALDIHTREPEGDILIFMTGQDDIEKLVSKLEDKVRALEE-GSCMDAIIFPL 250
N +E+ L I +E G +L+F+TG DDI L D+++A G ++
Sbjct: 524 NLIEAVL---CHICRKERPGAVLVFLTGWDDIRSL----SDQIKAHPLLGDPNRVLLLMC 576
Query: 251 HGSLPPELQVRVFSPPPPNCRRIIVATNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMY 310
HGS+ Q +F PPN R+I++ATN+AE S+T++ VV+V+D G K+ Y+ +
Sbjct: 577 HGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTP 636
Query: 311 SLDVVQISKVQANQRAGRAGRTRPGKCYRLYPSRLFQDEFLDVTVPEIQRSSLAGSVLYL 370
L IS+ A QR GRAGR PG+CY LYP ++ D F + +PE+ R+ L L +
Sbjct: 637 CLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVY-DAFAEYQLPELLRTPLNSLCLQI 695
Query: 371 KSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGRKMAELPLEPSLS 430
KSL + I L P S ++Q+A+ L +I A+DE +T +G+ ++ LP++P L
Sbjct: 696 KSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLG 755
Query: 431 RTLIEANNYGCITEALTVAAMLSAETALLPGQRQSKIEKKRKHPMPNLPDGSGLGDHIQL 490
+ LI + C LT+ + LS L Q + + K DH+ L
Sbjct: 756 KMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRF----SAKDYSDHMAL 811
Query: 491 LQIYECW---DRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQK 533
++ +E W +R +C N L + + + +RKQ + I+++
Sbjct: 812 VRAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKE 857
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 8/190 (4%)
Query: 3 TLPIVQYEEKILETVEANPVVVVIGETGSGKSTQLSQMLL-------RRGFSKIAVTQPX 55
TLP + +E++L+ + N V+VV GETG GK+TQL Q +L R F I TQP
Sbjct: 259 TLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIICTQPR 318
Query: 56 XXXXXXXXXXXXQELDVRLGEEVGYAIRFEDRTSPTTRIKYLTDGVLLRESLANPELNEY 115
E LGE VG+ +R E T + + T G+LLR L++ LN
Sbjct: 319 RISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGV 378
Query: 116 DVIILDEAHERSLNTDILMGLMKRLVKLRSSNLKVLITSATLDGDKVSKFFADCPVLSIP 175
+ +DE HER +N D L+ ++K L+ R +L++++ SATL+ + S ++ P + IP
Sbjct: 379 THVFVDEIHERGMNEDFLIIVLKELLP-RRPDLRLVLMSATLNAELFSNYYGGAPTIHIP 437
Query: 176 GKLYPVEILY 185
G +PV+ +
Sbjct: 438 GFTHPVKAHF 447
>AT5G14900.1 | Symbols: | helicase associated (HA2)
domain-containing protein | chr5:4822676-4823581 REVERSE
LENGTH=301
Length = 301
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 144/279 (51%), Gaps = 22/279 (7%)
Query: 361 SSLAGSVLYLKSLDLPDIDILKFDFLDPPSSESLQDALKQLYLIDAIDENGAITSIGRKM 420
++LA +VL LK L + ++ ++FD +D P+ ++L AL LY + A+D++ +T G M
Sbjct: 2 TNLANTVLTLKGLSVKNL--VRFDLIDSPAPDTLARALDDLYHLGALDDDCNLTKTGEMM 59
Query: 421 AELPLEPSLSRTLIEANNYGCITEALTVAAMLSAETALL-PGQRQSKIEKKRKHPMPNLP 479
+E PL+P +++ LI + + C E L+++AMLS + P K + K ++
Sbjct: 60 SEFPLDPQMAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHID 119
Query: 480 DGSGLGDHIQLLQIYECWDRNDYDIGWCKDNGLQVRGMLFVRDVRKQLSQIMQKIAKGPL 539
GDH+ LL ++ + +N+ D WC + R M VR+QL +IM +
Sbjct: 120 -----GDHLTLLNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLR-----F 169
Query: 540 DIRAHGNGDEFRRDYRNLRKALCVGYANQLA--ERKMHHNGYRTLNFQAQVVQVHPSSVL 597
I+ R Y N+RKAL GY Q+A ER H+ +R + QVV +HPS+ L
Sbjct: 170 QIKLCSPDFNSRDYYVNIRKALLAGYFMQVAHLERTGHYLTFRDKD--DQVVHLHPSNCL 227
Query: 598 TADDLGKFPDYVVYHELVATPKPFMRNVCSVDMRWTTTV 636
P++VVY+E V T + F+R V + W V
Sbjct: 228 DHK-----PEWVVYNEYVFTSRNFIRTVTHIRGEWLVDV 261