Miyakogusa Predicted Gene
- Lj4g3v2526040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2526040.1 Non Chatacterized Hit- tr|I1KRZ4|I1KRZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13592 PE,75.64,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; DEAD-like
helicases superfamily,Helicase,,CUFF.51091.1
(760 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 875 0.0
AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 223 5e-58
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 220 3e-57
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 220 4e-57
AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 | chr3:1698180-... 206 3e-53
AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2... 203 3e-52
AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 | chr1:1... 160 3e-39
AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helic... 143 5e-34
AT5G27680.1 | Symbols: RECQSIM | RECQ helicase SIM | chr5:979424... 98 2e-20
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 83 9e-16
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 83 9e-16
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 83 9e-16
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 83 9e-16
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 81 3e-15
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 81 3e-15
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 79 1e-14
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 78 3e-14
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 74 5e-13
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 72 1e-12
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 72 1e-12
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 72 2e-12
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 72 2e-12
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 70 4e-12
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 67 5e-11
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 67 6e-11
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 65 1e-10
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 64 4e-10
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 64 5e-10
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 64 5e-10
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 64 5e-10
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 62 1e-09
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 61 2e-09
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 61 2e-09
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 61 2e-09
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 60 6e-09
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 60 8e-09
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 59 1e-08
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 59 1e-08
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 59 1e-08
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 59 1e-08
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 59 1e-08
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 59 1e-08
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 59 1e-08
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 59 1e-08
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 57 6e-08
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 56 9e-08
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 56 9e-08
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 56 1e-07
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 56 1e-07
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 56 1e-07
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 55 2e-07
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 54 3e-07
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 54 6e-07
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 53 8e-07
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 52 1e-06
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 52 2e-06
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 52 2e-06
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 51 3e-06
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 51 3e-06
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 51 3e-06
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 51 4e-06
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 50 4e-06
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 50 4e-06
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 50 4e-06
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 50 5e-06
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 49 1e-05
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 49 1e-05
>AT1G27880.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr1:9708940-9713901 FORWARD LENGTH=911
Length = 911
Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/667 (62%), Positives = 526/667 (78%), Gaps = 1/667 (0%)
Query: 93 AVEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSL 152
+VE+A+ A + E SDENL KLL L+YGY+ FR+GQL+AIKM+L G STML+LPTGAGKSL
Sbjct: 240 SVEDAILAVKTEASDENLTKLLNLVYGYDSFRDGQLQAIKMILGGSSTMLVLPTGAGKSL 299
Query: 153 CYQLPAMILPGITLVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLREGAI 212
CYQ+PAMILPGITLVVSPLV+L+IDQLK LPS I+G L+SS+Q EEA+ETL +L+EG I
Sbjct: 300 CYQIPAMILPGITLVVSPLVSLMIDQLKHLPSIIKGGLLSSSQRPEEATETLRKLKEGII 359
Query: 213 KVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLN 272
KVLFVSPER LN EFLS +VSLVV+DEAHC+SEWSHNFRPS+MRL+AS+L L
Sbjct: 360 KVLFVSPERLLNVEFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLFSELK 419
Query: 273 VGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMV-KNRMKDLLLLIK 331
+LAM L A++S+L+IP TNLIQK+QLRDNF LSVS+ NRMKDLL+L++
Sbjct: 420 AECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMKDLLILME 479
Query: 332 SSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRV 391
S P+ E++SII+YCKFQ ETD IS+YL DNNI AK YHSG+ +K+R +QE F SNKIRV
Sbjct: 480 SPPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRV 539
Query: 392 VVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLR 451
VVATVAFGMGLDK DVGAVIH+S+P S+EEYVQEIGRAGRDGRLSYCHLFYD++TY KLR
Sbjct: 540 VVATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLR 599
Query: 452 SLMYSEGVDEYAVNKFLREVFPSDKNSCGKICSLIKESASRMFDMKEEVMLTLLTRLELG 511
SL +S+GVDEYAV KFL VF ++ KICSL+ ESAS+ FDMKEEVM T+LT LELG
Sbjct: 600 SLAHSDGVDEYAVGKFLTHVFSTETKQHEKICSLVIESASQKFDMKEEVMQTILTHLELG 659
Query: 512 DVQYLHVLPPINVTCVLNFHKTPPPFLAKKDSAIAVIIKRSESKTGQYVFDIPTVANDMG 571
+VQYL +LP +N+ C LNFHK+ P LA + + +A I+K+S K G +VFDIP VA+ +
Sbjct: 660 EVQYLRMLPQLNICCTLNFHKSSPNTLAARSAIVAAILKKSHVKQGLHVFDIPAVASSIC 719
Query: 572 VTAVELTNQLSNLKVMGEITYEMKDLAYCYRIVEIPTDLFSLSADVTQWLSEVEICKVRK 631
V ++ ++ LK+ GE+TYE+KD A+CY I++ P ++ SLS+ +T+WL+E+E CKVRK
Sbjct: 720 VATTDVLAEIQALKMKGEVTYELKDSAFCYTILKSPKEICSLSSHLTKWLTEIESCKVRK 779
Query: 632 MDAMFNAAYFAVNLCDKMHGCSNANHTPCLQRKILDYFAGVDNTDFCKKISQSSPFLRAD 691
+D M +AA A+++ + S A T LQ +I DYF G + D K +Q+ FLRAD
Sbjct: 780 LDIMSSAAVAAISVSNTSELSSGAKQTRSLQSRIFDYFNGDEKCDSPSKATQNCAFLRAD 839
Query: 692 IKVFLQSNSQARFTPRAVARIMHGIASPAYPSTTWCKTHFWGRYKNVDFKVVMEAAKSEL 751
IKVFLQSN QA+FTPRA+ARIMHG+ SPA+P++ W KTHFWGRY NVDF+V+MEAA++EL
Sbjct: 840 IKVFLQSNRQAKFTPRAIARIMHGVGSPAFPNSVWSKTHFWGRYMNVDFRVIMEAAQTEL 899
Query: 752 KNYVGKD 758
N+V ++
Sbjct: 900 FNFVDRN 906
>AT4G35740.1 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936233-16940172 FORWARD
LENGTH=713
Length = 713
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/371 (37%), Positives = 214/371 (57%), Gaps = 16/371 (4%)
Query: 94 VEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLC 153
V+ S+ ++ E LVKLL+ +G+ FR QLEAI+ V++G+ ++PTG GKS+C
Sbjct: 8 VQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSIC 67
Query: 154 YQLPAMILPGITLVVSPLVALIIDQLKQLPS-CIRGALISSTQTLEEASETLVQLREG-- 210
YQ+PA+ PGI LVVSPL+AL+ +Q+ L I +SSTQ ++ L G
Sbjct: 68 YQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKP 127
Query: 211 AIKVLFVSPERFLNEEF---LSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLL 267
++++L+V+PE + F L + + ++L+ IDEAHCIS W H+FRPS+ +L S L
Sbjct: 128 SVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYRQL--STL 185
Query: 268 HKRLNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQL-RDNFHLSV---SMVKNRM 323
L VLA+ +I +L++ R L+ K+ R N V ++ N
Sbjct: 186 RDSLADVPVLALTATAAPKVQKDVIDSLNL-RNPLVLKSSFNRPNIFYEVRYKDLLDNAY 244
Query: 324 KDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQEL 383
DL L+KS IIYC + D +S +L+ I + +YH+G+ SK RS V +
Sbjct: 245 TDLGNLLKSCGNI---CAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNSKMRSTVLDD 301
Query: 384 FSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYD 443
+ S+K +++VATVAFGMG+DK+DV V H+++P+S+E + QE GRAGRD S L+Y
Sbjct: 302 WLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYG 361
Query: 444 DETYFKLRSLM 454
+ K+ L+
Sbjct: 362 VDDRKKMEYLL 372
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 201/353 (56%), Gaps = 12/353 (3%)
Query: 117 IYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALII 176
++G FR Q E I ++G +++PTG GKSL YQLPA+I GITLV+SPLV+LI
Sbjct: 448 VFGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQ 507
Query: 177 DQLKQL-PSCIRGALISSTQTLEEASETLVQL--REGAIKVLFVSPERFLNEE----FLS 229
DQ+ L + I A +S+ E + +L K+L+V+PE+ + L
Sbjct: 508 DQIMNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLE 567
Query: 230 TISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLD 289
+++ ++ VIDEAHC+S+W H+FRP + L +L ++ VLA+ +
Sbjct: 568 NLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSL--GILKQKFPNIPVLALTATATASVKE 625
Query: 290 AIISALDIPRTNLIQKAQLRDNFHLSV-SMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQ 348
++ AL + + +++ R N SV K ++D+ IK + F E IIYC +
Sbjct: 626 DVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECG--IIYCLSR 683
Query: 349 IETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVG 408
++ + +S L + A YH + ++R+++Q +S ++I ++ ATVAFGMG++K DV
Sbjct: 684 MDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVR 743
Query: 409 AVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYSEGVDE 461
VIH+SLP+S+E Y QE GRAGRDG+ S C L+Y Y +++ ++ GVD+
Sbjct: 744 FVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQ 796
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 230/428 (53%), Gaps = 28/428 (6%)
Query: 90 DCEAVEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAG 149
D E+ + + D +NL +L++G FR Q E I ++G +++PTG G
Sbjct: 437 DTESSNDKKWTSSDFPWTKNLEVYNKLVFGNHSFRPNQREIINATMSGCDVFVLMPTGGG 496
Query: 150 KSLCYQLPAMILPGITLVVSPLVALIIDQLKQL-PSCIRGALISSTQTLEEASETLVQL- 207
KSL YQLPA++ GITLV+SPLV+LI DQ+ L + I A +S+ E E L +L
Sbjct: 497 KSLTYQLPALLCAGITLVISPLVSLIQDQIMNLLQTNISAASLSAGMEWAEQLEILQELS 556
Query: 208 -REGAIKVLFVSPERFLNEE----FLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRL 262
+ K+L+V+PE+ E L +++ S ++ VIDEAHC+S+W H+FRP + L
Sbjct: 557 SEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGL 616
Query: 263 RASLLHKRLNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNR 322
+L ++ +LA+ + ++ AL + + +++ R N SV N+
Sbjct: 617 --GVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNK 674
Query: 323 -MKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQ 381
++D+ I+ + F E IIYC +++ + ++ L A YH + +R++VQ
Sbjct: 675 CLEDIDKFIRENHFDECG--IIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGKRAFVQ 732
Query: 382 ELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF 441
+ +S ++I ++ ATVAFGMG++K DV VIH+SLP+S+E Y QE GRAGRDG+ S C L+
Sbjct: 733 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 792
Query: 442 YDDETYFKLRSLMYSEGVDEYAVNKFLREVFPSDKNSCGKICSLIKESASRMFDMKEEVM 501
Y Y +++ ++ G+ + + G C K S+ RM + E +
Sbjct: 793 YSYTDYIRVKHMISQGGLGQGQM-------------KMGYNC---KASSGRMLETNTENL 836
Query: 502 LTLLTRLE 509
L +++ E
Sbjct: 837 LRMVSYCE 844
>AT3G05740.1 | Symbols: RECQI1 | RECQ helicase l1 |
chr3:1698180-1701228 FORWARD LENGTH=606
Length = 606
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 204/360 (56%), Gaps = 19/360 (5%)
Query: 101 ARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI 160
A D++ NLV I+G + FR Q +A + + K +++PTG GKSLCYQLPA +
Sbjct: 190 ALDDLEFANLV-----IFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATL 244
Query: 161 LPGITLVVSPLVALIIDQLK--QLPSCIRGALISSTQTLEEASETLVQLREG--AIKVLF 216
G+T+V+SPL++LI DQ+ L I ++S QT +A+ L +LR + K+L+
Sbjct: 245 KAGVTIVISPLLSLIQDQIVALNLKFGIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLY 304
Query: 217 VSPERFL-NEEFLSTISAGSAVSLV---VIDEAHCISEWSHNFRPSFMRLRASLLHKRLN 272
V+PE+ + FL T+ L+ V+DEAHC+S+W H+FRP + L L +
Sbjct: 305 VTPEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPDYREL--GCLKQNFP 362
Query: 273 VGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSM-VKNRMKDLLLLIK 331
V+A+ ++ +L IPR +++ + R N V + K +K L L++
Sbjct: 363 RVPVMALTATATESVCQDVLKSLRIPRAPVLKMSFDRINLKYEVIVKTKEPLKQLQELLR 422
Query: 332 SSPFAEVQSIIIYCKFQIETDTISRYLNDN-NILAKSYHSGITSKERSYVQELFSSNKIR 390
F + QS I+YC + E ++++LN+ + YH+G+ +K+R VQ + + ++R
Sbjct: 423 DR-FKD-QSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVR 480
Query: 391 VVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKL 450
+V AT+AFGMG+DK DV VIH +L +++E Y QE GRAGRDG + C Y + + ++
Sbjct: 481 IVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRV 540
>AT1G31360.1 | Symbols: RECQL2, ATRECQ2, MED34 | RECQ helicase L2 |
chr1:11232422-11237412 FORWARD LENGTH=705
Length = 705
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 193/351 (54%), Gaps = 12/351 (3%)
Query: 117 IYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALII 176
++G +R Q E I ++ G+ ++I+ G GKSLCYQLPAM+ G TLVVSPL++LI
Sbjct: 84 VFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGGTTLVVSPLLSLIQ 143
Query: 177 DQLKQLPSC-IRGALISSTQTLEEASETLVQLREGA--IKVLFVSPERF-LNEEFLSTIS 232
DQ+ L + I +++ST E L +G +K+L+V+PE+ ++ F+S +
Sbjct: 144 DQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKVSKSKRFMSKLE 203
Query: 233 A---GSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLD 289
+SL+ IDEAHC S+W H+FRP + L S+L + ++A+ +
Sbjct: 204 KCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNL--SILKTQFPKVPMVALTATATQKVQN 261
Query: 290 AIISALDIPRTNLIQKAQLRDNFHLSV---SMVKNRMKDLLLLIKSSPFAEVQSIIIYCK 346
+I L IP+ + R N SV S V + D + ++ +S I+YC
Sbjct: 262 DLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCF 321
Query: 347 FQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRD 406
+ E + I+ L + I A YH+ + + R V +S NK++V+V TVAFGMG++K D
Sbjct: 322 SRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPD 381
Query: 407 VGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYSE 457
V VIH+SL +S+E Y QE GRAGRDG S C LF+ + S+++ E
Sbjct: 382 VRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFYE 432
>AT1G31360.2 | Symbols: RECQL2, MED34 | RECQ helicase L2 |
chr1:11233174-11237412 FORWARD LENGTH=580
Length = 580
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 166/309 (53%), Gaps = 12/309 (3%)
Query: 159 MILPGITLVVSPLVALIIDQLKQLPSC-IRGALISSTQTLEEASETLVQLREGA--IKVL 215
M+ G TLVVSPL++LI DQ+ L + I +++ST E L +G +K+L
Sbjct: 1 MLRGGTTLVVSPLLSLIQDQVMGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKIL 60
Query: 216 FVSPERF-LNEEFLSTISA---GSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRL 271
+V+PE+ ++ F+S + +SL+ IDEAHC S+W H+FRP + L S+L +
Sbjct: 61 YVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNL--SILKTQF 118
Query: 272 NVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSV---SMVKNRMKDLLL 328
++A+ + +I L IP+ + R N SV S V + D +
Sbjct: 119 PKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIA 178
Query: 329 LIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNK 388
++ +S I+YC + E + I+ L + I A YH+ + + R V +S NK
Sbjct: 179 EFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNK 238
Query: 389 IRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYF 448
++V+V TVAFGMG++K DV VIH+SL +S+E Y QE GRAGRDG S C LF+
Sbjct: 239 LQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVP 298
Query: 449 KLRSLMYSE 457
+ S+++ E
Sbjct: 299 RQSSMVFYE 307
>AT4G35740.2 | Symbols: RecQl3, ATRECQ3 | DEAD/DEAH box RNA helicase
family protein | chr4:16936788-16940172 FORWARD
LENGTH=620
Length = 620
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 152/278 (54%), Gaps = 15/278 (5%)
Query: 186 IRGALISSTQTLEEASETLVQLREG--AIKVLFVSPERFLNEEF---LSTISAGSAVSLV 240
I +SSTQ ++ L G ++++L+V+PE + F L + + ++L+
Sbjct: 8 IAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLI 67
Query: 241 VIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIISALDIPRT 300
IDEAHCIS W H+FRPS+ +L S L L VLA+ +I +L++ R
Sbjct: 68 AIDEAHCISSWGHDFRPSYRQL--STLRDSLADVPVLALTATAAPKVQKDVIDSLNL-RN 124
Query: 301 NLIQKAQL-RDNFHLSV---SMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISR 356
L+ K+ R N V ++ N DL L+KS IIYC + D +S
Sbjct: 125 PLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNI---CAIIYCLERTTCDDLSV 181
Query: 357 YLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLP 416
+L+ I + +YH+G+ SK RS V + + S+K +++VATVAFGMG+DK+DV V H+++P
Sbjct: 182 HLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIP 241
Query: 417 ESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLM 454
+S+E + QE GRAGRD S L+Y + K+ L+
Sbjct: 242 KSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLL 279
>AT5G27680.1 | Symbols: RECQSIM | RECQ helicase SIM |
chr5:9794244-9798637 REVERSE LENGTH=858
Length = 858
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 26/183 (14%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
IIY + E+ I++YL + A +Y++ + K V + F NK++VVVAT+AFGMG
Sbjct: 501 IIYVPTRKESVNIAKYLCGVGLKAAAYNASLPKKHLRQVHQDFHDNKLQVVVATIAFGMG 560
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYD----------------DE 445
+DK++V +IHY +SLE Y QE GRAGRDG L+ C L+ D E
Sbjct: 561 IDKKNVRKIIHYGWLQSLEAYYQEAGRAGRDGELAECVLYADLSRAPTLLPSRRSKEQTE 620
Query: 446 TYFKLRSLMYSEGVDEYAVN-----KFLREVFPSDK-NSCGKICSLIKESASRMFDMKEE 499
+K+ S + G++ ++ E F S K NSC +C+ E + D++EE
Sbjct: 621 QAYKMLSDCFRYGMNTSQCRAKILVEYFGEEFSSKKCNSC-DVCT---EGPPELVDVREE 676
Query: 500 VML 502
L
Sbjct: 677 ANL 679
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 113/224 (50%), Gaps = 19/224 (8%)
Query: 113 LLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLV 172
+L+ +G R Q EA+ +A K +++ TG+GKSLC+Q+PA++ + +V+SPL+
Sbjct: 159 ILRNRFGISSLRSFQREALSTWVAHKDCLVLAATGSGKSLCFQIPALLTGKVVVVISPLI 218
Query: 173 ALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPE---RFLNEEFLS 229
+L+ DQ +L A + L+ E + +G ++++V PE R + L
Sbjct: 219 SLMHDQCLKLSRHKVSACFLGSGQLDNCIEE--KAMQGMYQIIYVCPETVVRLIKP--LQ 274
Query: 230 TISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGS---------VLAMX 280
++ ++L IDEAHC+S+W H+FRP + +L S+L + + ++A+
Sbjct: 275 KLAKTHGIALFAIDEAHCVSKWGHDFRPHYRKL--SVLRENFCASNLEFLEYDVPIMALT 332
Query: 281 XXXXXXXLDAIISALDIPR-TNLIQKAQLRDNFHLSVSMVKNRM 323
+ I+ +L + + T ++ + R N SV + +
Sbjct: 333 ATATVNVQEDILESLHLSKETKIVLTSFFRPNLQFSVKHSRTKF 376
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 144/345 (41%), Gaps = 24/345 (6%)
Query: 116 LIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----------LPGIT 165
L G+ Q ++ + + G+ + I TG+GK+L Y +P + +
Sbjct: 174 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 233
Query: 166 LVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLR--EGAIKVLFVSPERFL 223
LV+SP L ++ R + IS T L + QLR E ++ +P R
Sbjct: 234 LVLSPTRELATQIQEEAVKFGRSSRISCT-CLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 224 NEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXX 283
+ + IS +S +V+DEA + + F P ++ + KR +
Sbjct: 293 DILEMRRISL-RQISYLVLDEADRMLD--MGFEPQIRKIVKEIPTKRQTLMYTATWPKGV 349
Query: 284 XXXXLDAIISALDIPRTN---LIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQS 340
D +++ + N L+ + + + M K R + +L + P ++V
Sbjct: 350 RKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQE-PGSKV-- 406
Query: 341 IIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGM 400
II+C + D ++R L A + H + ER V F S + V+VAT
Sbjct: 407 -IIFCSTKRMCDQLTRNLT-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 401 GLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
GLD +D+ AV++Y P +E+YV IGR GR G F+ D+
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 144/345 (41%), Gaps = 24/345 (6%)
Query: 116 LIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----------LPGIT 165
L G+ Q ++ + + G+ + I TG+GK+L Y +P + +
Sbjct: 174 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 233
Query: 166 LVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLR--EGAIKVLFVSPERFL 223
LV+SP L ++ R + IS T L + QLR E ++ +P R
Sbjct: 234 LVLSPTRELATQIQEEAVKFGRSSRISCT-CLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 224 NEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXX 283
+ + IS +S +V+DEA + + F P ++ + KR +
Sbjct: 293 DILEMRRISL-RQISYLVLDEADRMLD--MGFEPQIRKIVKEIPTKRQTLMYTATWPKGV 349
Query: 284 XXXXLDAIISALDIPRTN---LIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQS 340
D +++ + N L+ + + + M K R + +L + P ++V
Sbjct: 350 RKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQE-PGSKV-- 406
Query: 341 IIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGM 400
II+C + D ++R L A + H + ER V F S + V+VAT
Sbjct: 407 -IIFCSTKRMCDQLTRNLT-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 401 GLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
GLD +D+ AV++Y P +E+YV IGR GR G F+ D+
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 144/345 (41%), Gaps = 24/345 (6%)
Query: 116 LIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----------LPGIT 165
L G+ Q ++ + + G+ + I TG+GK+L Y +P + +
Sbjct: 174 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 233
Query: 166 LVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLR--EGAIKVLFVSPERFL 223
LV+SP L ++ R + IS T L + QLR E ++ +P R
Sbjct: 234 LVLSPTRELATQIQEEAVKFGRSSRISCT-CLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 224 NEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXX 283
+ + IS +S +V+DEA + + F P ++ + KR +
Sbjct: 293 DILEMRRISL-RQISYLVLDEADRMLD--MGFEPQIRKIVKEIPTKRQTLMYTATWPKGV 349
Query: 284 XXXXLDAIISALDIPRTN---LIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQS 340
D +++ + N L+ + + + M K R + +L + P ++V
Sbjct: 350 RKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQE-PGSKV-- 406
Query: 341 IIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGM 400
II+C + D ++R L A + H + ER V F S + V+VAT
Sbjct: 407 -IIFCSTKRMCDQLTRNLT-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 401 GLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
GLD +D+ AV++Y P +E+YV IGR GR G F+ D+
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 144/345 (41%), Gaps = 24/345 (6%)
Query: 116 LIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----------LPGIT 165
L G+ Q ++ + + G+ + I TG+GK+L Y +P + +
Sbjct: 174 LSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTI 233
Query: 166 LVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLR--EGAIKVLFVSPERFL 223
LV+SP L ++ R + IS T L + QLR E ++ +P R
Sbjct: 234 LVLSPTRELATQIQEEAVKFGRSSRISCT-CLYGGAPKGPQLRDLERGADIVVATPGRLN 292
Query: 224 NEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXX 283
+ + IS +S +V+DEA + + F P ++ + KR +
Sbjct: 293 DILEMRRISL-RQISYLVLDEADRMLD--MGFEPQIRKIVKEIPTKRQTLMYTATWPKGV 349
Query: 284 XXXXLDAIISALDIPRTN---LIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQS 340
D +++ + N L+ + + + M K R + +L + P ++V
Sbjct: 350 RKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQE-PGSKV-- 406
Query: 341 IIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGM 400
II+C + D ++R L A + H + ER V F S + V+VAT
Sbjct: 407 -IIFCSTKRMCDQLTRNLT-RQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 401 GLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
GLD +D+ AV++Y P +E+YV IGR GR G F+ D+
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQ 509
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 147/345 (42%), Gaps = 51/345 (14%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPA--------MILPG---ITLVVSPLVALI 175
Q + M + G+ + I TG+GK+L Y LPA M+ G I LV++P L
Sbjct: 126 QSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELA 185
Query: 176 IDQLKQLPS-----------CIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLN 224
+ Q++Q S CI G + Q + L++G ++++ +P R ++
Sbjct: 186 V-QIQQEASKFGSSSKIKTTCIYGGVPKGPQVRD--------LQKG-VEIVIATPGRLID 235
Query: 225 EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRL-------RASLLHKRLNVGSVL 277
S + V+ +V+DEA + + F P ++ R +L V
Sbjct: 236 M-MESNNTNLRRVTYLVLDEADRMLD--MGFDPQIRKIVSHIRPDRQTLYWSATWPKEVE 292
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAE 337
+ II + D+ I+ Q+ D +S S N++ LL I +
Sbjct: 293 QLSKKFLYNPYKVIIGSSDLKANRAIR--QIVD--VISESQKYNKLVKLLEDI-----MD 343
Query: 338 VQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
I+++ + D I+R L + A S H + ER +V F S K ++ AT
Sbjct: 344 GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV 403
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
GLD +DV VI+Y P SLE+YV IGR GR G + F+
Sbjct: 404 AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFF 448
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 140/346 (40%), Gaps = 53/346 (15%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----LPGITLVVSPLVALIIDQLKQL 182
Q + M L G+ + I TG+GK+L Y LPA++ P + P+V LI+ ++L
Sbjct: 192 QAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDGPIV-LILAPTREL 250
Query: 183 P------------------SCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLN 224
+CI G Q + LR G ++++ +P R +
Sbjct: 251 AVQIQEESRKFGLRSGVRSTCIYGGAPKGPQ--------IRDLRRG-VEIVIATPGRLI- 300
Query: 225 EEFLSTISAG-SAVSLVVIDEAHCISEWSHNFRPSFMRL-------RASLLHKRLNVGSV 276
+ L V+ +V+DEA + + F P ++ R +LL V
Sbjct: 301 -DMLECQHTNLKRVTYLVLDEADRMLD--MGFEPQIRKIVSQIRPDRQTLLWSATWPREV 357
Query: 277 LAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFA 336
+ AII + D+ KA N + + + LL L+K
Sbjct: 358 ETLARQFLRDPYKAIIGSTDL-------KANQSINQVIEIVPTPEKYNRLLTLLKQ--LM 408
Query: 337 EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATV 396
+ I+I+ + + D ++R L + A + H T ER V F S + ++ AT
Sbjct: 409 DGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATD 468
Query: 397 AFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
GLD +D+ V++Y P +LE+Y+ IGR GR G F+
Sbjct: 469 VAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFF 514
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 158/388 (40%), Gaps = 53/388 (13%)
Query: 89 IDCEAVEEAVSAARDEVSDENLVK-LLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTG 147
+ + VEEA AA ++ NL + +L +E Q +L G+ + I TG
Sbjct: 102 VTGKGVEEAKYAALKTFAESNLPENVLDCCKTFEKPSPIQSHTWPFLLDGRDLIGIAKTG 161
Query: 148 AGKSLCYQLPAMI---------------LPGITLVVSP---LVALIIDQLKQLPS----- 184
+GK+L + +PA++ + LV+SP L I D L++
Sbjct: 162 SGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLK 221
Query: 185 --CIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEFLSTISAGSAVSLVVI 242
C+ G Q + +R G + ++ +P R L + S + S VS VV+
Sbjct: 222 SICVYGGSSKGPQ--------ISAIRSG-VDIVIGTPGR-LRDLIESNVLRLSDVSFVVL 271
Query: 243 DEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIISALDIPRTN- 301
DEA + + F+ N V M LD A + N
Sbjct: 272 DEADRMLDMGFEEPVRFILS---------NTNKVRQMVMFSATWPLDVHKLAQEFMDPNP 322
Query: 302 ---LIQKAQLRDNFHLS--VSMVKNRMKD--LLLLIKSSPFAEVQSIIIYCKFQIETDTI 354
+I L N + + ++ R +D L+ L++ ++ ++++ +++E + +
Sbjct: 323 IKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERL 382
Query: 355 SRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYS 414
R+L A S H ER+ LF ++VAT GLD DV VI+Y+
Sbjct: 383 ERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYT 442
Query: 415 LPESLEEYVQEIGRAGRDGRLSYCHLFY 442
P + E+YV IGR GR G+ H F+
Sbjct: 443 FPLTTEDYVHRIGRTGRAGKKGVAHTFF 470
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 148/350 (42%), Gaps = 57/350 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILP--------------GITLVVSP-- 170
Q++ + +VL+G+ + I TG+GK+L + LP +IL I LV+ P
Sbjct: 124 QVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSR 183
Query: 171 -------------LVALIIDQLKQLPS--CIRGALISSTQTLEEASETLVQLREGAIKVL 215
+ +L+ D +L S CI G + S + + +V G +K +
Sbjct: 184 ELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDI 243
Query: 216 FVSPERFLNE-EFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVG 274
+ L+ L+ A V L D+ + + + R + L ++ + ++ +
Sbjct: 244 LAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTL--LFSATMPAKIQIF 301
Query: 275 SVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLL---IK 331
+ A+ A + LD+ IQ+ V VK K + LL K
Sbjct: 302 ATSALVKPVTVNVGRAGAANLDV-----IQE----------VEYVKQEAKIVYLLECLQK 346
Query: 332 SSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRV 391
++P ++I+C+ + + D I YL + A + H G ++R Y LF + K V
Sbjct: 347 TTP-----PVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDV 401
Query: 392 VVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF 441
+VAT GLD D+ VI+Y +P +E YV IGR GR G+ F
Sbjct: 402 LVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTF 451
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 147/360 (40%), Gaps = 44/360 (12%)
Query: 112 KLLQLIY--GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI--------- 160
+LL+ +Y G+ Q ++ + + + + I TG+GK+L Y +P +
Sbjct: 171 ELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDS 230
Query: 161 -LPGITLVVSPLVALIID-QLKQLP---------SCIRGALISSTQTLEEASETLVQLRE 209
+ LV+SP L Q++ L +C+ G Q L ++
Sbjct: 231 RMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQ--------LKEIER 282
Query: 210 GAIKVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHK 269
G + ++ +P R + + IS VS +V+DEA + + F P ++ + K
Sbjct: 283 G-VDIVVATPGRLNDILEMKRISL-HQVSYLVLDEADRMLD--MGFEPQIRKIVNEVPTK 338
Query: 270 RLNVGSVLAMXXXXXXXXLDAIISALDIPRTN---LIQKAQLRDNFHLSVSMVKN-RMKD 325
R + D +++ + N L+ + + M K+ R++
Sbjct: 339 RQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQ 398
Query: 326 LLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFS 385
+L + III+C + D ++R L A + H + ER V F
Sbjct: 399 ILRSQEPG-----SKIIIFCSTKRMCDQLARNLT-RTFGAAAIHGDKSQAERDDVLNQFR 452
Query: 386 SNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
S + V+VAT GLD +D+ V++Y P +E+YV IGR GR G + F+ D+
Sbjct: 453 SGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQ 512
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 150/348 (43%), Gaps = 26/348 (7%)
Query: 116 LIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL---------PGIT- 165
L G+ Q + + L + + I TG+GK+L Y +PA IL G T
Sbjct: 451 LSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTV 510
Query: 166 LVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASE--TLVQLREGAIKVLFVSPERFL 223
L+++P L + R + IS T A + L +L GA ++ +P R L
Sbjct: 511 LILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGA-DIVVATPGR-L 568
Query: 224 NEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXX 283
N+ + VSL+V+DEA + + F P ++ + +R +
Sbjct: 569 NDILEMKMIDFQQVSLLVLDEADRMLDMG--FEPQIRKIVNEIPPRRQTLMYTATWPKEV 626
Query: 284 XXXXLDAIISALDIPRTNLIQKAQLRDNFHLS--VSMVKNRMKDLLL--LIKSSPFAEVQ 339
D +++ + + N+ + +L N ++ V +V K+ L +++S
Sbjct: 627 RKIASDLLVNPVQV---NIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQ--ERGS 681
Query: 340 SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFG 399
+II+C + D ++R + + A H T ER +V F S K V++AT
Sbjct: 682 KVIIFCSTKRLCDHLARSVG-RHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 740
Query: 400 MGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETY 447
GLD +D+ VI+Y P +E+YV IGR GR G F+ ++ +
Sbjct: 741 RGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDW 788
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 154/368 (41%), Gaps = 63/368 (17%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLP--------AMILP------GITLVV---- 168
Q++ + ++LAG+ + I TG+GK+L + LP M++P I L+V
Sbjct: 173 QVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSR 232
Query: 169 --------------SPLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLREGAIKV 214
+PLV L+ L CI G + S + + +V G +K
Sbjct: 233 ELARQTYEVVEQFVAPLVEAGYPPLRSL-LCIGGIDMRSQLEVVKRGVHIVVATPGRLKD 291
Query: 215 LFVSPERFLNE-EFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNV 273
+ + L+ +L+ A V L D+ + + + R + L ++ + ++ +
Sbjct: 292 MLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTL--LFSATMPTKIQI 349
Query: 274 GSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLL---I 330
+ A+ A + LD+ IQ+ V VK K + LL
Sbjct: 350 FARSALVKPVTVNVGRAGAANLDV-----IQE----------VEYVKQEAKIVYLLECLQ 394
Query: 331 KSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIR 390
K+SP ++I+C+ + + D I YL + A + H G ++R Y F + K
Sbjct: 395 KTSP-----PVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKD 449
Query: 391 VVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYD----DET 446
V+VAT GLD D+ VI+Y +P +E YV IGR GR G+ F + + T
Sbjct: 450 VLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETT 509
Query: 447 YFKLRSLM 454
L+ L+
Sbjct: 510 LLDLKHLL 517
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 145/357 (40%), Gaps = 44/357 (12%)
Query: 115 QLIY--GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----------LP 162
+++Y G+ Q ++ + + + + I TG+GK+L Y +P + +
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG 301
Query: 163 GITLVVSPLVALIID-QLKQLP---------SCIRGALISSTQTLEEASETLVQLREGAI 212
LV+SP L Q++ L +C+ G Q L ++ G +
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQ--------LKEIERG-V 352
Query: 213 KVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLN 272
++ +P R + + IS VS +V+DEA + + F P ++ + KR
Sbjct: 353 DIVVATPGRLNDILEMKRISL-HQVSYLVLDEADRMLD--MGFEPQIRKIVNEVPTKRQT 409
Query: 273 VGSVLAMXXXXXXXXLDAIISALDIPRTN---LIQKAQLRDNFHLSVSMVKN-RMKDLLL 328
+ D +++ + N L+ + + M K+ R++ +L
Sbjct: 410 LMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILR 469
Query: 329 LIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNK 388
+ III+C + D ++R L A + H + ER V F S +
Sbjct: 470 SQEPG-----SKIIIFCSTKRMCDQLARNLT-RTFGAAAIHGDKSQAERDDVLNQFRSGR 523
Query: 389 IRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
V+VAT GLD +D+ V++Y P +E+YV IGR GR G + F+ D+
Sbjct: 524 TPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQ 580
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+C + + D +S + +N S H + KER + F S RV++ T + G
Sbjct: 278 VIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARG 337
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL--MYSEGV 459
+D + V VI+Y LP + E Y+ IGR+GR GR F + LR + YS +
Sbjct: 338 IDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQI 397
Query: 460 DEYAVN 465
DE +N
Sbjct: 398 DEMPMN 403
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 158/374 (42%), Gaps = 48/374 (12%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----LPGIT--------- 165
GY+ Q+ AI + L + + I TG+GK+ + LP + LP ++
Sbjct: 332 GYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPY 391
Query: 166 -LVVSP---LVALIIDQLKQLPSCI--RGALISSTQTLEEASETLVQLREGAIKVLFVSP 219
+V++P L I ++ + + R I Q++EE + Q +++ +P
Sbjct: 392 AVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQGLKITQ----GCEIVIATP 447
Query: 220 ERFLN--EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVL 277
R ++ E + ++ + VV+DEA + + F P + ++ L +
Sbjct: 448 GRLIDCLERRYAVLNQ---CNYVVLDEADRMIDMG--FEPQVAGVLDAMPSSNLKPENEE 502
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLL-----LLIKS 332
+ SA P + + LR+ +++ + DL+ ++ +S
Sbjct: 503 EELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTA-GKTTDLISQHVIMMKES 561
Query: 333 SPFAEVQSI---------IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQEL 383
F +Q + I++ + D+I++ L+ + H G + ++R E
Sbjct: 562 EKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEG 621
Query: 384 FSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF-- 441
F + + V+VAT G G+D DV VI+Y +P+ +E Y IGR GR G+ F
Sbjct: 622 FRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLT 681
Query: 442 -YDDETYFKLRSLM 454
+D E ++ L+ ++
Sbjct: 682 LHDTEVFYDLKQML 695
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 338 VQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
+ II+C + + D ++ + +N + S H KER + F S K RV++A+
Sbjct: 261 INQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDV 320
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+ G+D + V VI+Y +P + E Y+ IGRAGR GR
Sbjct: 321 WARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGR 357
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 147/351 (41%), Gaps = 30/351 (8%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI------LPGITLVV-SPLVALIIDQL 179
Q +AI ++L+G+ PTG+GK+ + P +I GI V+ SP L
Sbjct: 168 QRQAIPILLSGRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTA 227
Query: 180 KQLPSCIRGALISSTQTLEEASETLVQLREGA---IKVLFVSPERFLNEEFLSTISAGSA 236
++ I+G S + ++ LV+ + + VL +P R I S
Sbjct: 228 REGKKLIKG----SNFHIRLMTKPLVKTADFSKLWCDVLISTPMRLKRAIKAKKIDL-SK 282
Query: 237 VSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIISAL- 295
V +V+DE+ + F S ++ ++ N + ++ ++ + ++
Sbjct: 283 VEYLVLDESDKL------FEQSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIM 336
Query: 296 -DIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEV--QSIIIYCKFQIETD 352
D R + +K + + + LL L +S FAE ++I+ + +
Sbjct: 337 HDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQS--FAESLNPPVLIFVQSKERAK 394
Query: 353 TISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIH 412
+ L NI A HS + ER + F + + V++AT G+D + + VI+
Sbjct: 395 ELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVIN 454
Query: 413 YSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL---MYSEGVD 460
Y P+S Y+ IGR+GR GR FY ++ LR++ M S G +
Sbjct: 455 YDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTMMSSGCE 505
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 320 KNRMKDLLLLIKSSPFAEVQSI-IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERS 378
++ + DLL + + Q++ +++ + + D++ +L N A S H T +ER
Sbjct: 399 RSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQERE 458
Query: 379 YVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYC 438
+ F S + ++VAT GLD V V+++ LP +++YV IGR GR G+
Sbjct: 459 VALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 518
Query: 439 HLFYDDETYFKLRSLM-----YSEGVDEYAVNKFLREVFPSDKN 477
F++D R L ++ V E+ R F KN
Sbjct: 519 TAFFNDGNTSLARPLAELMQEANQEVPEWLTRYASRSSFGGGKN 562
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 152/350 (43%), Gaps = 47/350 (13%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM--------ILPG---ITLVVSP---LV 172
Q +A+ ++++G+ + + TG+GK+L + LP + + G I LV++P LV
Sbjct: 218 QTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELV 277
Query: 173 ALIIDQLKQL--PSCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEFLST 230
I +++ P IR + + ++ + +L+ G +++ +P R ++ L T
Sbjct: 278 QQIHSDIRKFSKPLGIRCVPVYGGSGV---AQQISELKRGT-EIVVCTPGRMID--ILCT 331
Query: 231 ISAG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNV-------GSVLAM 279
S V+ +V+DEA + + F P R+ ++ +R V V +
Sbjct: 332 SSGKITNLRRVTFLVMDEADRM--FDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 389
Query: 280 XXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQ 339
++ + + ++ Q ++R +R LL L+ ++E
Sbjct: 390 ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPE--------SDRFLRLLELLGE--WSEKG 439
Query: 340 SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFG 399
I+++ + Q + D + R + ++ S H G +R F ++ +++AT
Sbjct: 440 KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAA 499
Query: 400 MGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY--DDETY 447
GLD +++ V+++ P E+YV +GR GR GR F DD Y
Sbjct: 500 RGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKY 549
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+++ + + DT+ +L N A S H T +ER F + + ++VAT G
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL 453
LD V V+++ LP +++YV IGR GR G+ F+++ RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+++ + + DT+ +L N A S H T +ER F + + ++VAT G
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL 453
LD V V+++ LP +++YV IGR GR G+ F+++ RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+++ + + DT+ +L N A S H T +ER F + + ++VAT G
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL 453
LD V V+++ LP +++YV IGR GR G+ F+++ RSL
Sbjct: 472 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSL 523
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 152/350 (43%), Gaps = 47/350 (13%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM--------ILPG---ITLVVSP---LV 172
Q +A+ ++++G+ + + TG+GK+L + LP + + G I LV++P LV
Sbjct: 556 QTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELV 615
Query: 173 ALIIDQLKQL--PSCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEFLST 230
I +++ P IR + + ++ + +L+ G +++ +P R ++ L T
Sbjct: 616 QQIHSDIRKFSKPLGIRCVPVYGGSGV---AQQISELKRGT-EIVVCTPGRMID--ILCT 669
Query: 231 ISAG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNV-------GSVLAM 279
S V+ +V+DEA + + F P R+ ++ +R V V +
Sbjct: 670 SSGKITNLRRVTFLVMDEADRM--FDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727
Query: 280 XXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQ 339
++ + + ++ Q ++R +R LL L+ ++E
Sbjct: 728 ARKVLNKPVEIQVGGRSVVNKDITQLVEVRPE--------SDRFLRLLELL--GEWSEKG 777
Query: 340 SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFG 399
I+++ + Q + D + R + ++ S H G +R F ++ +++AT
Sbjct: 778 KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAA 837
Query: 400 MGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF--YDDETY 447
GLD +++ V+++ P E+YV +GR GR GR F DD Y
Sbjct: 838 RGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKY 887
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 335 FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVA 394
+A+ I++ + + + D +S L+ N+I ++ H I+ +R F K V+VA
Sbjct: 348 YAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 406
Query: 395 TVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL 453
T GLD +V VIHY LP E +V GR GR G+ L + +RSL
Sbjct: 407 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSL 465
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 335 FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVA 394
+A+ I++ + + + D +S L+ N+I ++ H I+ +R F K V+VA
Sbjct: 348 YAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 406
Query: 395 TVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL 453
T GLD +V VIHY LP E +V GR GR G+ L + +RSL
Sbjct: 407 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSL 465
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 1/119 (0%)
Query: 335 FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVA 394
+A+ I++ + + + D +S L+ N+I ++ H I+ +R F K V+VA
Sbjct: 255 YAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 313
Query: 395 TVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL 453
T GLD +V VIHY LP E +V GR GR G+ L + +RSL
Sbjct: 314 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSL 372
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 144/350 (41%), Gaps = 48/350 (13%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVS--------- 169
GYE Q + ++L GK + TG GK++ A +LP I +VV
Sbjct: 339 GYETMTVVQEATLPIILKGKDVLAKAKTGTGKTV-----AFLLPSIEVVVKSPPTSPDNK 393
Query: 170 --PLVALIIDQLKQL---------------PSCIRGALISSTQ-TLEEASETLVQLREGA 211
P++AL+I ++L PS +I T+ LE+ +++
Sbjct: 394 RPPILALVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQK-----RMQTNP 448
Query: 212 IKVLFVSPERFLNEEFLSTISAGS---AVSLVVIDEAHCISEWSHNFRPSFMRLRASLLH 268
++L +P R L + +T + V ++V+DEA + + FR R+ +++
Sbjct: 449 CQILVATPGR-LKDHIENTPGFATRLKGVKVLVLDEADHLLDMG--FRKDIERIISAVPK 505
Query: 269 KR---LNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKD 325
+R L +V L ++ I+ Q H+ S+ ++
Sbjct: 506 ERQTFLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRH-FSL 564
Query: 326 LLLLIKSSPFAEVQ-SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELF 384
L L++ V +I++C + T ++ L + N+ + HS R+ V F
Sbjct: 565 LYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEF 624
Query: 385 SSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+K ++V + G+D DV V+ LP+ E+Y+ +GR GR G+
Sbjct: 625 RKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGK 674
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 367 SYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEI 426
+ H+G + ++R Y E F + V+V T G GLD D+ VI+Y +P +++ Y I
Sbjct: 493 TLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRI 552
Query: 427 GRAGRDGRLSYCHLFY---DDETYFKLR 451
GR GR G+ F D + ++ L+
Sbjct: 553 GRTGRAGKTGVATTFLTLEDKDVFYGLK 580
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 320 KNRMKDLLLLIKSSPFAEVQSI-IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERS 378
++ + DLL + + Q++ +++ + + D++ +L N A + H + +ER
Sbjct: 386 RSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQERE 445
Query: 379 YVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYC 438
F + + ++VAT GLD V V+++ LP +++YV IGR GR G
Sbjct: 446 VALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLA 505
Query: 439 HLFYDD 444
F++D
Sbjct: 506 TAFFND 511
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 318 MVKNR-MKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKE 376
M KNR + DLL + + ++I+ K +++ L + N + HSG++ +E
Sbjct: 314 MEKNRKLNDLLDAL------DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 367
Query: 377 RSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
R + F R++VAT G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 368 RLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 424
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 318 MVKNR-MKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKE 376
M KNR + DLL + + ++I+ K +++ L + N + HSG++ +E
Sbjct: 332 MEKNRKLNDLLDAL------DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 385
Query: 377 RSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
R + F R++VAT G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 386 RLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 442
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 152/353 (43%), Gaps = 34/353 (9%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------PG------I 164
GY+ Q++AI L GKS + TG+GK+ + +P + P +
Sbjct: 129 GYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPL 188
Query: 165 TLVVSPLVALII---DQLKQLPSCI--RGALISSTQTLEEASETLVQLREGAIKVLFVSP 219
+V++P L + DQ K L + + AL+ + S L ++++G ++++ +P
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPM---SGQLYRIQQG-VELIIGTP 244
Query: 220 ERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR-LNVGSVLA 278
R ++ TI + ++ V +DE C+ FR M++ +L + L + ++
Sbjct: 245 GRVVDLLSKHTIELDNIMTFV-LDEVDCM--LQRGFRDQVMQIFQALSQPQVLLFSATIS 301
Query: 279 MXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEV 338
L I + I N KA + + K ++ D+L +S +
Sbjct: 302 REVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDIL---RSQNHFKP 358
Query: 339 QSIIIYCKFQIETDTISRYLND-NNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
+++ Y ++ D ++ + + A S H KER V F ++ V+V+T
Sbjct: 359 PAVV-YVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGV 417
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY--DDETYF 448
G G+D V VI + +P +++EY+ IGRA R G +F DD F
Sbjct: 418 LGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLF 470
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 152/353 (43%), Gaps = 34/353 (9%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------PG------I 164
GY+ Q++AI L GKS + TG+GK+ + +P + P +
Sbjct: 129 GYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPL 188
Query: 165 TLVVSPLVALII---DQLKQLPSCI--RGALISSTQTLEEASETLVQLREGAIKVLFVSP 219
+V++P L + DQ K L + + AL+ + S L ++++G ++++ +P
Sbjct: 189 AMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPM---SGQLYRIQQG-VELIIGTP 244
Query: 220 ERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR-LNVGSVLA 278
R ++ TI + ++ V +DE C+ FR M++ +L + L + ++
Sbjct: 245 GRVVDLLSKHTIELDNIMTFV-LDEVDCM--LQRGFRDQVMQIFQALSQPQVLLFSATIS 301
Query: 279 MXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEV 338
L I + I N KA + + K ++ D+L +S +
Sbjct: 302 REVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDIL---RSQNHFKP 358
Query: 339 QSIIIYCKFQIETDTISRYLND-NNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
+++ Y ++ D ++ + + A S H KER V F ++ V+V+T
Sbjct: 359 PAVV-YVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGV 417
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY--DDETYF 448
G G+D V VI + +P +++EY+ IGRA R G +F DD F
Sbjct: 418 LGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLF 470
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 318 MVKNR-MKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKE 376
M KNR + DLL + + ++I+ K +++ L + N + HSG++ +E
Sbjct: 190 MEKNRKLNDLLDAL------DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 243
Query: 377 RSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
R + F R++VAT G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 244 RLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 318 MVKNR-MKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKE 376
M KNR + DLL + + ++I+ K +++ L + N + HSG++ +E
Sbjct: 273 MEKNRKLNDLLDAL------DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
Query: 377 RSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
R + F R++VAT G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 327 RLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 318 MVKNR-MKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKE 376
M KNR + DLL + + ++I+ K +++ L + N + HSG++ +E
Sbjct: 273 MEKNRKLNDLLDAL------DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEE 326
Query: 377 RSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
R + F R++VAT G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 327 RLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 138/334 (41%), Gaps = 47/334 (14%)
Query: 135 LAGKSTMLILPTGAGKSLCYQLPAM--ILPGITL-----VVSPLVALIIDQLKQLPSCIR 187
L GK ++ TG GKS+ + LPA+ +L + V+P+ ALI+ ++L S I
Sbjct: 363 LDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIA 422
Query: 188 G---ALIS-----STQTLEEASETLV---QLREGAIKVLFVSPERFLN--EEFLSTISAG 234
AL+ QTL + + +L ++L +P R L+ E S
Sbjct: 423 AEGKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRL 482
Query: 235 SAVSLVVIDEAHCISEWSHNFRPS-------FMRLRASLLHKRL---NVGSVLAMXXXXX 284
A+ L ++DEA + + FR R R SLL V V +
Sbjct: 483 MALKLFIVDEADLLLDL--GFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRD 540
Query: 285 XXXLDAI----ISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQS 340
+D I + D R + I A +FHL ++K I ++P +
Sbjct: 541 HSYIDTIGLGCVETHDKVRQSCIV-APHESHFHLVPHLLKEH-------INNTPDYK--- 589
Query: 341 IIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGM 400
II++C + T + L + + + H+ R+ V + F + ++V +
Sbjct: 590 IIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSAR 649
Query: 401 GLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
G++ DV VI +P E+Y+ +GR GR+G+
Sbjct: 650 GMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGK 683
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 6/138 (4%)
Query: 326 LLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLN---DNNILAKSYHSGITSKERSYVQE 382
L+ L+KS E + II+ T + + LN D I AK Y G+ RS +
Sbjct: 326 LVALLKS---WEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELK 382
Query: 383 LFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
F I+V+VA+ A G+D + V VI+Y +P + ++ GR R G+ C
Sbjct: 383 AFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLL 442
Query: 443 DDETYFKLRSLMYSEGVD 460
+ + L+ G D
Sbjct: 443 SNHEVRRFSKLLEKVGSD 460
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 144/349 (41%), Gaps = 74/349 (21%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM--------ILPG---ITLVVSPLVALI 175
Q +A+ ++++G+ + + TG+GK+L + LP + + G I LV++P L+
Sbjct: 423 QAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELV 482
Query: 176 IDQLKQLPSCIR------GALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEFLS 229
+Q+ S IR G + ++ + +L+ G +++ +P R ++ L
Sbjct: 483 ----QQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGT-EIVVCTPGRMID--ILC 535
Query: 230 TISAG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXX 285
T S V+ +V+DEA + + F P R+ ++ R V
Sbjct: 536 TSSGKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV------------ 581
Query: 286 XXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYC 345
+ SA + + + L + V KD+ L++ P
Sbjct: 582 -----LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRP----------- 625
Query: 346 KFQIETDTISRYLNDNNILAKSYHSG-----ITSKERSYVQELFSSNKIRVVVATVAFGM 400
E++ SR L +L + Y G + S+E+S F S+ +++AT
Sbjct: 626 ----ESERFSRLL---ELLGEWYEKGKVLVFVRSQEKSISD--FKSDVCNLLIATSVAAR 676
Query: 401 GLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY--DDETY 447
GLD +++ V+++ P E+YV +GR GR GR F DD Y
Sbjct: 677 GLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKY 725
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 143/337 (42%), Gaps = 45/337 (13%)
Query: 130 AIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL----------------PGITLVVSPLVA 173
I V+ KS +L TG+GK+L Y LP + L P T+V+ P
Sbjct: 142 GIPAVMERKSVVLGSHTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRP-RTVVLCPTRE 200
Query: 174 LIIDQLKQLPSCI------RGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEF 227
L +Q+ ++ I R L+S + ++L AI ++ +P R L
Sbjct: 201 LS-EQVYRVAKSISHHARFRSILVSGGSRIRPQEDSL----NNAIDMVVGTPGRILQHIE 255
Query: 228 LSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGS-------VLAMX 280
+ G ++ +V+DEA + + F P + A L + L V A
Sbjct: 256 EGNMVYGD-IAYLVLDEADTM--FDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATM 312
Query: 281 XXXXXXXLDAIISALDIPRTNLIQK--AQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEV 338
+D ++ RT+ + K A R +F + +S +++++ LL +++ S A+
Sbjct: 313 TMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDF-IKLSGGEDKLEALLQVLEPS-LAKG 370
Query: 339 QSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNK--IRVVVATV 396
++++C + + YL++N I +YH + +++R + F + +V T
Sbjct: 371 SKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTD 430
Query: 397 AFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
GLD DV V+ + P++ +Y+ GR R G
Sbjct: 431 LAARGLD-LDVDHVVMFDFPKNSIDYLHRTGRTARMG 466
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 161/378 (42%), Gaps = 41/378 (10%)
Query: 81 RGRCKTREIDCEAVEEAVSAARDEVSDENLVK--LLQLIY--GYECFREGQLEAIKMVLA 136
+ R K D E V+A + ++ +K LL IY G+E Q E+I + L
Sbjct: 108 KARLKLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 167
Query: 137 GKSTMLILPTGAGKSLCYQLPAM--------ILPGITLVVSPLVALIIDQL-KQLPSCIR 187
G+ + G GK+ + +P + ++ + +V + +AL Q+ K+L ++
Sbjct: 168 GRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLK 227
Query: 188 GALISST--QTLEEASETLVQLREGAIKVLFVSPERFLNEEFLSTISAGSAV----SLVV 241
++ +T +L++ L Q + +L +P R L+ G V S++V
Sbjct: 228 IQVMVTTGGTSLKDDIMRLYQ----PVHLLVGTPGRILD-----LTKKGVCVLKDCSVLV 278
Query: 242 IDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIISALDIPRT- 300
+DEA + S F+PS L + L R +L D L P
Sbjct: 279 MDEADKL--LSQEFQPSVEHLISFLPESR----QILMFSATFPVTVKDFKDRFLTNPYVI 332
Query: 301 NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQ--SIIIYCKFQIETDTISRYL 358
NL+ + L+ + V+ R K L ++ F+++Q II+C + +++ +
Sbjct: 333 NLMDELTLKGITQF-YAFVEERQKIHCL---NTLFSKLQINQSIIFCNSVNRVELLAKKI 388
Query: 359 NDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPES 418
+ H+ + R+ V F + R +V T F G+D + V VI++ P++
Sbjct: 389 TELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN 448
Query: 419 LEEYVQEIGRAGRDGRLS 436
E Y+ +GR+GR G L
Sbjct: 449 AETYLHRVGRSGRFGHLG 466
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 161/378 (42%), Gaps = 41/378 (10%)
Query: 81 RGRCKTREIDCEAVEEAVSAARDEVSDENLVK--LLQLIY--GYECFREGQLEAIKMVLA 136
+ R K D E V+A + ++ +K LL IY G+E Q E+I + L
Sbjct: 108 KARLKLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 167
Query: 137 GKSTMLILPTGAGKSLCYQLPAM--------ILPGITLVVSPLVALIIDQL-KQLPSCIR 187
G+ + G GK+ + +P + ++ + +V + +AL Q+ K+L ++
Sbjct: 168 GRDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLK 227
Query: 188 GALISST--QTLEEASETLVQLREGAIKVLFVSPERFLNEEFLSTISAGSAV----SLVV 241
++ +T +L++ L Q + +L +P R L+ G V S++V
Sbjct: 228 IQVMVTTGGTSLKDDIMRLYQ----PVHLLVGTPGRILD-----LTKKGVCVLKDCSVLV 278
Query: 242 IDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIISALDIPRT- 300
+DEA + S F+PS L + L R +L D L P
Sbjct: 279 MDEADKL--LSQEFQPSVEHLISFLPESR----QILMFSATFPVTVKDFKDRFLTNPYVI 332
Query: 301 NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQ--SIIIYCKFQIETDTISRYL 358
NL+ + L+ + V+ R K L ++ F+++Q II+C + +++ +
Sbjct: 333 NLMDELTLKGITQF-YAFVEERQKIHCL---NTLFSKLQINQSIIFCNSVNRVELLAKKI 388
Query: 359 NDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPES 418
+ H+ + R+ V F + R +V T F G+D + V VI++ P++
Sbjct: 389 TELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN 448
Query: 419 LEEYVQEIGRAGRDGRLS 436
E Y+ +GR+GR G L
Sbjct: 449 AETYLHRVGRSGRFGHLG 466
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 138/355 (38%), Gaps = 58/355 (16%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------------PGI 164
G++ Q + ++L GK + TG GK++ + LP++ P I
Sbjct: 99 GFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPII 158
Query: 165 TLVVSPLVALIIDQ-------LKQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFV 217
LVV P L LK PS +I T+ E +L++ ++L
Sbjct: 159 VLVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQR----RLQKSPCQILVA 214
Query: 218 SPERFLNEEFLSTISAGS---AVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVG 274
+P R L + +T + V ++V+DEA + + FR R+ A++ +R
Sbjct: 215 TPGR-LKDHIDNTSGFATRLMGVKVLVLDEADHLLDM--GFRREIERIIAAVPKQRQTF- 270
Query: 275 SVLAMXXXXXXXXLDAIISALDIPRTNLIQK---------------AQLRDNFHLSVSMV 319
+ + + + D N +Q+ A L +F L ++
Sbjct: 271 -LFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLL 329
Query: 320 KNRMKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSY 379
K + D + +II+C + T ++ L ++ + HS R+
Sbjct: 330 KKHITDNVGY----------KVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQSYRTR 379
Query: 380 VQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
V + F +K ++V + G+D DV V+ LP E+Y+ +GR GR G+
Sbjct: 380 VSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGK 434
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 148/344 (43%), Gaps = 34/344 (9%)
Query: 128 LEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------PG------ITLVVSPLVA 173
++AI L GKS + TG+GK+ + +P + P + +V++P
Sbjct: 1 MQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRE 60
Query: 174 LII---DQLKQLPSCI--RGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEFL 228
L + DQ K L + + AL+ + S L ++++G ++++ +P R ++
Sbjct: 61 LCVQVEDQAKMLGKGLPFKTALVVGGDPM---SGQLYRIQQG-VELIIGTPGRVVDLLSK 116
Query: 229 STISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR-LNVGSVLAMXXXXXXXX 287
TI + ++ V +DE C+ FR M++ +L + L + ++
Sbjct: 117 HTIELDNIMTFV-LDEVDCM--LQRGFRDQVMQIFQALSQPQVLLFSATISREVEKVGGS 173
Query: 288 LDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYCKF 347
L I + I N KA + + K ++ D+L +S + +++ Y
Sbjct: 174 LAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDIL---RSQNHFKPPAVV-YVSS 229
Query: 348 QIETDTISRYLND-NNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRD 406
++ D ++ + + A S H KER V F ++ V+V+T G G+D
Sbjct: 230 RVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLV 289
Query: 407 VGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY--DDETYF 448
V VI + +P +++EY+ IGRA R G +F DD F
Sbjct: 290 VRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLF 333
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 139/345 (40%), Gaps = 38/345 (11%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------------PGI 164
G+E Q + ++L GK + TG GK++ + LPA+ P I
Sbjct: 401 GFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPII 460
Query: 165 TLVVSPLVALIIDQ-------LKQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFV 217
LVV P L LK PS +I T+ E +++ ++L
Sbjct: 461 VLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQR----RMQTNPCQILVA 516
Query: 218 SPERFLNEEFLSTISAGS---AVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVG 274
+P R L + +T + V ++V+DEA + + FR R+ A++ +R
Sbjct: 517 TPGR-LKDHIENTSGFATRLMGVKVLVLDEADHLLDM--GFRRDIERIIAAVPKQRQTF- 572
Query: 275 SVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLS----VSMVKNRMKDLLLLI 330
+ + + + D N +Q+ + ++ ++ + L +L+
Sbjct: 573 -LFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVLL 631
Query: 331 KSSPFAEVQ-SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKI 389
K V +II+C + T ++ L+ ++ + HS R+ V + F +K
Sbjct: 632 KEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSKA 691
Query: 390 RVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
++V + G+D DV V+ LP E+Y+ +GR GR G+
Sbjct: 692 IILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGK 736
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 150/368 (40%), Gaps = 44/368 (11%)
Query: 108 ENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCY------QLPAMIL 161
ENL++ + YG+E Q I G + +G GK+ + QL ++
Sbjct: 48 ENLLRGI-YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLI 106
Query: 162 PGITLVVSPLVAL----------IIDQLK-QLPSCIRGALISSTQTLEEASETLVQLREG 210
LV++P L + D L ++ +C+ G + Q + +A
Sbjct: 107 QCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA---------- 156
Query: 211 AIKVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR 270
+ V+ +P R + ++ A + + + V+DEA + S F+ + LL +
Sbjct: 157 GVHVVVGTPGRVFDMLKRQSLRADN-IKMFVLDEADEM--LSRGFKDQIYDI-FQLLPPK 212
Query: 271 LNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLR----DNFHLSVSMVKNRMKDL 326
+ VG A +S P L+++ +L F+++V + +++ L
Sbjct: 213 IQVGVFSATMPPEALEITRKFMSK---PVRILVKRDELTLEGIKQFYVNVEKEEWKLETL 269
Query: 327 LLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSS 386
L ++ A QS+I + + + D ++ + + + H + R + F S
Sbjct: 270 CDLYET--LAITQSVI-FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 326
Query: 387 NKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY--DD 444
RV++ T G+D + V VI++ LP E Y+ IGR+GR GR F DD
Sbjct: 327 GSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 386
Query: 445 ETYFKLRS 452
E LR+
Sbjct: 387 ERMLCLRT 394
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 134/337 (39%), Gaps = 53/337 (15%)
Query: 135 LAGKSTMLILPTGAGKSLCYQLPAM--ILPGIT-----LVVSPLVALIIDQLKQLPSCIR 187
L GK ++ TG GKS+ + LPA+ +L + V+P+ LI+ ++L S I
Sbjct: 410 LDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIA 469
Query: 188 G---ALISSTQTLEEASETLV----------QLREGAIKVLFVSPERFLN--EEFLSTIS 232
AL+ + + +TL+ +L ++L +P R L+ E S
Sbjct: 470 AEGKALLKNHDGI--GVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTS 527
Query: 233 AGSAVSLVVIDEAHCISEWS-----HNFRPSFMRLRASLLHKRL---NVGSVLAMXXXXX 284
A+ L ++DEA + + R R SLL V V +
Sbjct: 528 RLMALKLFIVDEADLLLDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRD 587
Query: 285 XXXLDAI----ISALDIPRTNLIQKAQLRDNFHLSVSMVK---NRMKDLLLLIKSSPFAE 337
+D I + D + + I A +FHL ++K N M D
Sbjct: 588 HSYIDTIGLGCVETHDKVKQSCIV-APHESHFHLVPHLLKEHINNMPDY----------- 635
Query: 338 VQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
II++C + T + L + + + H+ R+ V + F + ++V +
Sbjct: 636 --KIIVFCSTGMVTSLMYTLLREMKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSDV 693
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
G++ DV VI +P E+Y+ +GR GR+G+
Sbjct: 694 SARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGK 730
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 364 LAKSY-----HSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPES 418
LAKSY H I+ +R F ++VAT GLD +V VIHY LP +
Sbjct: 381 LAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNN 440
Query: 419 LEEYVQEIGRAGRDGRLSYCHLFY-DDET 446
E +V GR GR G+ L + D+T
Sbjct: 441 TETFVHRTGRTGRAGKKGSAILIHGQDQT 469
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%)
Query: 365 AKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQ 424
A H +T +R ELF ++ ++AT GLD V VI+Y+ P ++ YV
Sbjct: 439 AAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVH 498
Query: 425 EIGRAGRDGRLSYCHLFYDD 444
+GR R GR Y F D
Sbjct: 499 RVGRTARAGREGYAVTFVTD 518
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 335 FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVA 394
++ II+ K + + + L + S H +T +R + + F +V++A
Sbjct: 337 LGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIA 396
Query: 395 TVAFGMGLDKRDVGAVIHYSLPESLEE-------YVQEIGRAGRDGRLSYC-HLFYDD 444
T G D++ V V++Y+LP E Y+ +GRAGR GR +L DD
Sbjct: 397 TDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLDD 454
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
I++ + + + D +S Y + ++ H I+ +R F ++VAT G
Sbjct: 353 IVFTQTKRDADRLS-YALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARG 411
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
LD +V +IHY LP + E +V GR GR G+ L Y
Sbjct: 412 LDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIY 452
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 102/230 (44%), Gaps = 14/230 (6%)
Query: 209 EGAIKVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLH 268
+ + V+ +P R + ++ A A+ + V+DEA + S F+ + LL
Sbjct: 157 QSGVHVVVGTPGRVFDLLRRQSLRA-DAIKMFVLDEADEM--LSRGFKDQIYDI-FQLLP 212
Query: 269 KRLNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLR----DNFHLSVSMVKNRMK 324
++ VG A L+ ++ P L+++ +L F+++V + +++
Sbjct: 213 SKVQVGVFSA---TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLE 269
Query: 325 DLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELF 384
L L ++ A QS+I + + + D ++ + + + H + R + F
Sbjct: 270 TLCDLYET--LAITQSVI-FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 326
Query: 385 SSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
S RV++ T G+D + V VI++ LP E Y+ IGR+GR GR
Sbjct: 327 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGR 376
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 277 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 336
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+D + V VI++ LP E Y+ IGR+GR GR
Sbjct: 337 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGR 369
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 140/348 (40%), Gaps = 42/348 (12%)
Query: 108 ENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCY------QLPAMIL 161
ENL++ + YG+E Q I G + +G GK+ + QL +L
Sbjct: 48 ENLLRGI-YAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALL 106
Query: 162 PGITLVVSP-----------LVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLREG 210
LV++P + AL Q ++ +C+ G + Q + +A
Sbjct: 107 QCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQA---------- 156
Query: 211 AIKVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR 270
+ V+ +P R + ++ + + V+DEA + S F+ + LL +
Sbjct: 157 GVHVVVGTPGRVFDMLRRQSLRP-DCIKMFVLDEADEM--LSRGFKDQIYDI-FQLLPPK 212
Query: 271 LNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLR----DNFHLSVSMVKNRMKDL 326
+ VG A +S P L+++ +L F+++V +++ L
Sbjct: 213 IQVGVFSATMPPEALEITRKFMSK---PVRILVKRDELTLEGIKQFYVNVEKEDWKLETL 269
Query: 327 LLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSS 386
L ++ A QS+I + + + D ++ + + + H + R + F S
Sbjct: 270 CDLYET--LAITQSVI-FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 326
Query: 387 NKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
RV++ T G+D + V VI++ LP E Y+ IGR+GR GR
Sbjct: 327 GSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGR 374
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 277 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 336
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY--DDE 445
+D + V VI++ LP E Y+ IGR+GR GR F DDE
Sbjct: 337 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 382
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 272 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 331
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+D + V VI++ LP E Y+ IGR+GR GR
Sbjct: 332 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGR 364
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 282 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 341
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+D + V VI++ LP E Y+ IGR+GR GR
Sbjct: 342 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGR 374
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 65/371 (17%)
Query: 113 LLQLIY--GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM--------ILP 162
LL+ IY G+E Q E+I + L G + G GK+ + +P + ++
Sbjct: 135 LLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQ 194
Query: 163 GITLVVSPLVALIIDQL-KQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPER 221
+ LV + +AL Q+ K+L + ++ +T + +++L + + +L +P R
Sbjct: 195 AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG-TSLRDDIMRLHQ-PVHLLVGTPGR 252
Query: 222 FLNEEFLSTISAGSAV----SLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVL 277
L+ G V +++V+DEA + S F+PS L L R
Sbjct: 253 ILD-----LTKKGVCVLKDCAMLVMDEADKL--LSAEFQPSLEELIQFLPQNR------- 298
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFA- 336
++ + P T + + HL V N M L L+ + +A
Sbjct: 299 -----------QFLMFSATFPVT-----VKAFKDRHLRKPYVINLMDQLTLMGVTQYYAF 342
Query: 337 --EVQSI----IIYCKFQIETDTI-SRYLNDNNILAKSY----------HSGITSKERSY 379
E Q + ++ K QI I +N +LAK H+ + R+
Sbjct: 343 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNR 402
Query: 380 VQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCH 439
V F + R +V T F G+D + V VI++ P + E Y+ +GR+GR G L
Sbjct: 403 VFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAV 462
Query: 440 LFYDDETYFKL 450
E FK+
Sbjct: 463 NLVTYEDRFKM 473
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 65/371 (17%)
Query: 113 LLQLIY--GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM--------ILP 162
LL+ IY G+E Q E+I + L G + G GK+ + +P + ++
Sbjct: 135 LLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQ 194
Query: 163 GITLVVSPLVALIIDQL-KQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPER 221
+ LV + +AL Q+ K+L + ++ +T + +++L + + +L +P R
Sbjct: 195 AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGG-TSLRDDIMRLHQ-PVHLLVGTPGR 252
Query: 222 FLNEEFLSTISAGSAV----SLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVL 277
L+ G V +++V+DEA + S F+PS L L R
Sbjct: 253 ILD-----LTKKGVCVLKDCAMLVMDEADKL--LSAEFQPSLEELIQFLPQNR------- 298
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFA- 336
++ + P T + + HL V N M L L+ + +A
Sbjct: 299 -----------QFLMFSATFPVT-----VKAFKDRHLRKPYVINLMDQLTLMGVTQYYAF 342
Query: 337 --EVQSI----IIYCKFQIETDTI-SRYLNDNNILAKSY----------HSGITSKERSY 379
E Q + ++ K QI I +N +LAK H+ + R+
Sbjct: 343 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNR 402
Query: 380 VQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCH 439
V F + R +V T F G+D + V VI++ P + E Y+ +GR+GR G L
Sbjct: 403 VFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAV 462
Query: 440 LFYDDETYFKL 450
E FK+
Sbjct: 463 NLVTYEDRFKM 473