Miyakogusa Predicted Gene

Lj4g3v2523910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2523910.1 Non Chatacterized Hit- tr|B9G107|B9G107_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.5,9e-18,LEUCINE RICH REPEAT FAMILY PROTEIN,NULL;
F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; no
description,NULL,CUFF.51101.1
         (502 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26000.1 | Symbols:  | Ribonuclease inhibitor | chr3:9507042-...   362   e-100
AT3G27290.1 | Symbols:  | RNI-like superfamily protein | chr3:10...   197   1e-50
AT2G01620.1 | Symbols: MEE11 | RNI-like superfamily protein | ch...   142   4e-34

>AT3G26000.1 | Symbols:  | Ribonuclease inhibitor |
           chr3:9507042-9508542 REVERSE LENGTH=453
          Length = 453

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/438 (46%), Positives = 273/438 (62%), Gaps = 34/438 (7%)

Query: 56  CNRGPNVGASAAQDSVSKDILDILPSDPFGMDISTTFTGMDIGTTFTAITGWLEDLEFDY 115
           C+   N   +   D+ S DILD+LPSDPFGMDI+ TFT         AITGWLEDLE DY
Sbjct: 27  CSSFDNGRKNTGGDASSVDILDVLPSDPFGMDINNTFT---------AITGWLEDLEDDY 77

Query: 116 ----GGYQRDQLRPTE-HSYQLFAELNFFWNNAMRFHGFPGGNT------GVEERNVLHG 164
               G  +RD +   + +  QLFA L+FFWNNAM+F              G  + ++   
Sbjct: 78  NNQYGRRRRDDIWIGDGNRQQLFAGLSFFWNNAMQFQSSGYSYGSESLFGGAFDGSLFST 137

Query: 165 QSGPGESSSSRG-----DGAVSCNFDFGYACDDMHDMLGLGREFKDVAIASVSGDTSCMD 219
              P  S  + G     DG  SC+  F  A   + ++L      ++     V G +   +
Sbjct: 138 CKFPESSGENNGFGGALDGDGSCHGAFISA-SSVDEVLS----HENARNGEVVGSSDRCN 192

Query: 220 DVSCLGGDDLAPHPALSFCLSYLGLPDLLVVEGVCKYLQSTVRGDPLLWRSIHIDQPLNE 279
           +    G +D   HPA+ FCL +L   DLL V  VCK L +TV  D LLW+ IHI +PLNE
Sbjct: 193 N----GEEDAYVHPAIGFCLYHLRGKDLLSVSMVCKSLHTTVCDDTLLWKHIHICRPLNE 248

Query: 280 RITDDVLLELTSRAQGNLQCLSLVECTRITDEGLKRVLLANPKLIKLSVPGCTRLSIEGI 339
           +IT++ LL LT RAQG +QCL +V+C RITD+ LKRV+  N +++K+ VPGCTR++I+GI
Sbjct: 249 KITEEALLHLTERAQGTMQCLRIVDCCRITDDCLKRVVARNRQVVKIGVPGCTRITIDGI 308

Query: 340 VGILRVHNSRGTQRVKHLHIGGLYGITQKHFEELQLLLGTDSQLQQHSHKPHYYSRANLY 399
           + +LR   S G  +VKHL + GL+G+T+ H++EL  LL  D++++Q   KP +Y R    
Sbjct: 309 LSVLRDLKSAGKLQVKHLQLRGLFGVTKDHYDELIDLLNIDNKVKQTIQKPRFYHRGEAC 368

Query: 400 MSCDDDQAIDIEVCPRCQNLRLVYDCPAEGCQGDGHPTQMCRACTLCIPRCSQCGRCIND 459
           +SCDDD+A+DIE+CP+CQN +LVYDCPAE C+G    ++ CRAC+LCI RC  CGRCI D
Sbjct: 369 VSCDDDRALDIEMCPKCQNFKLVYDCPAEDCKGKKKGSEECRACSLCIQRCYHCGRCIID 428

Query: 460 SEYEETFCLELLCSSCSK 477
           +EYEE FCLELLC+ CSK
Sbjct: 429 TEYEEMFCLELLCAVCSK 446


>AT3G27290.1 | Symbols:  | RNI-like superfamily protein |
           chr3:10080038-10081265 REVERSE LENGTH=382
          Length = 382

 Score =  197 bits (501), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/253 (43%), Positives = 149/253 (58%), Gaps = 9/253 (3%)

Query: 232 HPALSFCLSYLGLPDLLVVEGVCKYLQSTVRGDPLLWRSIHI-DQPLNERITDDVLLELT 290
           H A    L YL L ++L VE VC+ L+ +V  +P  W SI + D  L  R+TD+ LL+LT
Sbjct: 128 HDAFELVLPYLELKEILAVEVVCRSLRDSVGKEPFFWTSIDLNDSFLQYRVTDESLLKLT 187

Query: 291 SRAQGNLQCLSLVECTRITDEGLKRVLLANPKLIKLSVPGCTRLSIEGIVGILRVHNSRG 350
            RA G ++CL+L  C  ITD GLK+VL +NP L KLSV GC RLS  G+V  LR   S  
Sbjct: 188 RRALGGVRCLNLGGCVGITDYGLKQVLASNPHLTKLSVSGCLRLSTAGLVSTLRDLKSSN 247

Query: 351 TQRVKHLHIGGLYGITQKHFEELQLLLGTDSQLQQHSHKPHYYS--RANLYMSCDDDQAI 408
              VK L  GG    T++ F+EL LLLG D+++     K  +Y+  R+  Y+  +DD+  
Sbjct: 248 RLGVKSLITGGALYFTKEQFKELNLLLGGDAKVGLQERKKRFYTSCRSEFYL--EDDRVT 305

Query: 409 DIEVCPRCQNLRLVYDCPAEGCQGDG---HPTQMCRACTLCIPRCSQCGRCINDSEYEET 465
           D+E+CP C+   LV+DCPA+ C   G   +    CRAC +CI RC +CG C+ND E  + 
Sbjct: 306 DLEICPWCEKPSLVFDCPADTCPLKGQYPYSKSSCRACVVCIERCHECGSCLNDCE-NKP 364

Query: 466 FCLELLCSSCSKQ 478
           FC    C  C ++
Sbjct: 365 FCFAFSCVVCIEK 377


>AT2G01620.1 | Symbols: MEE11 | RNI-like superfamily protein |
           chr2:278204-279226 FORWARD LENGTH=292
          Length = 292

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 137/256 (53%), Gaps = 34/256 (13%)

Query: 232 HPALSFCLSYL-GLPDLLVVEGVCKYLQSTVRGDPLLWRSIHIDQPLNERITDDVLLELT 290
           H  L   L YL  L +LL +  V + L+  +R +  LW  + I+ PL+ R+TDD+L E +
Sbjct: 17  HEVLLIVLPYLHSLFELLSMIRVSRSLRDAIRDETALWTKLVIEPPLSSRLTDDILSEFS 76

Query: 291 SRAQGNLQCLSLVECTRITDEGLKRVLLANPKLIKLSVPGCTRLSIEGIVGILRVHNSRG 350
           S++ G L+ L L +C  +T++GL+RV+ ANP + K+ VPGC+ L+ EGI+  +    S+ 
Sbjct: 77  SKSAGKLKTLILRQCLMVTNKGLRRVVDANPLITKIIVPGCSGLTPEGIMECVE-SLSKN 135

Query: 351 TQRVKHLHIGGLYGITQKHFEELQLLLGTDSQLQQHSHKPHYYSRANLYMSCDDDQAIDI 410
             +++ LHI G+ G T++H   L   L ++                           ID+
Sbjct: 136 NHKLETLHINGVNGFTKQHLSALYTYLSSEG-------------------------TIDL 170

Query: 411 EVCPRCQNLRLVYDCPAEGCQGDGHPTQMCRACTLCIPRCSQCGRCI--NDSEYEETFC- 467
           EVCP+C  +R++  C  E C       + CR C LCIPRC++C  C+  +D+E +E  C 
Sbjct: 171 EVCPKCDEVRMIPSCSRESC---NQKQRKCRGCWLCIPRCAECAVCLVGSDTESQEAACG 227

Query: 468 -LELLCSSCSKQLVKC 482
             ++LC  C   L KC
Sbjct: 228 NDDVLCLECWLVLPKC 243