Miyakogusa Predicted Gene
- Lj4g3v2468390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2468390.1 Non Chatacterized Hit- tr|F6HA95|F6HA95_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,24.22,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; PPR: pentatricopeptide repeat domain,Pent,CUFF.51047.1
(444 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 7e-83
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 1e-82
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 300 1e-81
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 298 4e-81
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 1e-78
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 290 1e-78
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 8e-78
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 285 3e-77
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 279 3e-75
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 278 7e-75
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 1e-73
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 272 4e-73
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 1e-72
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 268 6e-72
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 8e-72
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 2e-71
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 2e-71
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 261 5e-70
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 1e-69
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 258 5e-69
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 8e-69
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 256 2e-68
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 256 2e-68
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 3e-68
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 255 4e-68
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 7e-68
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 252 3e-67
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 5e-67
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 5e-67
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 6e-67
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 8e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 2e-66
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 249 4e-66
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 247 1e-65
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 246 2e-65
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 6e-65
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 243 1e-64
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 243 2e-64
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 3e-64
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 4e-64
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 5e-64
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 240 1e-63
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 2e-63
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 6e-63
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 6e-63
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 238 8e-63
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 237 1e-62
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 236 2e-62
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 235 4e-62
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 5e-62
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 234 6e-62
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 3e-61
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 4e-61
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 8e-61
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 1e-60
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 7e-60
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 2e-59
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 226 2e-59
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 225 4e-59
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 5e-58
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 1e-57
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 218 5e-57
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 6e-57
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 9e-57
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 216 3e-56
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 7e-56
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 8e-56
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 213 3e-55
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 212 5e-55
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 212 5e-55
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 1e-54
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 209 3e-54
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 6e-54
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 1e-53
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 5e-53
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 5e-53
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 203 2e-52
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 3e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 4e-52
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 202 6e-52
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 200 2e-51
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 5e-51
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 8e-51
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 8e-50
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 3e-49
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 7e-48
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 9e-46
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 9e-45
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 7e-43
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 4e-42
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 160 2e-39
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 101 9e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 91 2e-18
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 91 2e-18
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 90 3e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 89 5e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 5e-16
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 82 9e-16
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 82 1e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 78 1e-14
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 1e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 77 2e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 75 1e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 3e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 69 5e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 69 5e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 5e-12
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 68 1e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 2e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 64 3e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 63 3e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 61 2e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 59 5e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 2e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 54 3e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 4e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 53 5e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 52 7e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 50 2e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 50 5e-06
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 49 1e-05
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 304 bits (779), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 260/451 (57%), Gaps = 38/451 (8%)
Query: 30 HNPYLISQFLL----SASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVF 85
+ Y I++FL S S+ LP+A+ F+ P F WN +IR + S P SL+
Sbjct: 44 QDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD-RPDTFLWNLMIRGFSCSDEPERSLLL 102
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
++R+ S + +T+P LKAC+ +S+ H+ K G +D Y N+L+ YA
Sbjct: 103 YQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAV 162
Query: 146 CGAIGFARQVFD-------------------------------EMAVRTVVTWSSMIAAY 174
G A +FD +MA + ++W++MI+ Y
Sbjct: 163 TGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGY 222
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
V ++ EAL +F EM+ ++ +P++V+L + LSAC+++ + G+ IHSY+ + + M
Sbjct: 223 VQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDS 282
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM 294
LG L +MYAKCG M++AL VF ++ +K++Q++T +IS HG ++ IS F +M+ M
Sbjct: 283 VLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKM 342
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
G+KP+ ++F+ +L+ACS+ GLV+EGK+ F M R YN+KP++EHYGC+VDLL RAGL+ E
Sbjct: 343 GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Query: 355 AYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGANYVLTANVFST 412
A I+ MP++PNAVI + L ACR ++ ++ +++ ++ G YV AN+ +
Sbjct: 403 AKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAM 462
Query: 413 CASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
W A+ R MK++G+ K PGCS + ++
Sbjct: 463 DKKWDKAAETRRLMKEQGVAKVPGCSTISLE 493
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 48/297 (16%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF---ARQVFDEMAV 161
L+ C++ L H+ LKTGL D Y L F + F A+ VFD
Sbjct: 21 LQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
W+ MI + S+ P +L ++Q M ++ N+ T SLL ACS + I
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 222 HSYITRNHVDMSV----------------ELGTALFEM---------------YAKCGLM 250
H+ IT+ + V +L LF+ Y K G M
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
AL +F M EKN S+T MIS K+ + LF +M++ ++PD +S + LSAC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 311 SHMGLVDEGKM---YFDRM-VRMYNIKPSVEHYGC-MVDLLARAGLIQEAYDIIKNM 362
+ +G +++GK Y ++ +RM ++ GC ++D+ A+ G ++EA ++ KN+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSV------LGCVLIDMYAKCGEMEEALEVFKNI 308
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/410 (38%), Positives = 241/410 (58%), Gaps = 10/410 (2%)
Query: 45 ISLP------FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGL-SPD 97
+SLP +A F+ + +F WNT+IR A + + +R ++ SGL PD
Sbjct: 61 VSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPD 120
Query: 98 NFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD 157
TYPF +KA ++ + G HS+ +++G S Y N+LL YA+CG + A +VFD
Sbjct: 121 THTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180
Query: 158 EMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSA 217
+M + +V W+S+I + + P EAL ++ EM KP+ T+VSLLSAC+K+ ++
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 218 GESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGN 277
G+ +H Y+ + + ++ L ++YA+CG +++A +F+ M +KN S+T +I L
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 278 HGCQKDVISLFTQMEDM-GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
+G K+ I LF ME GL P ++F IL ACSH G+V EG YF RM Y I+P +
Sbjct: 301 NGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRI 360
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG--SVPSLDDKLMSK 394
EH+GCMVDLLARAG +++AY+ IK+MPM+PN VI R+ LGAC G + + +
Sbjct: 361 EHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 420
Query: 395 LESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
LE +YVL +N++++ W D +R M + G+KK PG S +EV N
Sbjct: 421 LEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 470
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 300 bits (768), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 249/420 (59%), Gaps = 19/420 (4%)
Query: 40 LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLES--LVFFRRLQRSGLSPD 97
LS+S + +A F+S+ F WNT+IRA A+ + E +++ + L+R SPD
Sbjct: 92 LSSSFSDVNYAFRVFDSIE-NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPD 150
Query: 98 NFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD 157
T+PF LKACA + S G H +K G D Y +N L+ Y CG + AR+VFD
Sbjct: 151 KHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFD 210
Query: 158 EMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSA 217
EM R++V+W+SMI A V AL +F+EM+ + E P+ T+ S+LSAC+ + ++S
Sbjct: 211 EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFE-PDGYTMQSVLSACAGLGSLSL 269
Query: 218 GESIHSYITRN---HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA 274
G H+++ R V M V + +L EMY KCG ++ A VF M +++L S+ MI
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 275 LGNHGCQKDVISLFTQMEDM--GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNI 332
HG ++ ++ F +M D ++P+ ++F +L AC+H G V++G+ YFD MVR Y I
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 333 KPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLM 392
+P++EHYGC+VDL+ARAG I EA D++ +MPM+P+AVI RS L AC +G+ L +++
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIA 449
Query: 393 SKL-------ESELG---ANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+ ES G YVL + V+++ + W D +R M + G++K PGCS +E+
Sbjct: 450 RNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEI 509
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 130/277 (46%), Gaps = 15/277 (5%)
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSD---CYTDNTLLKFYADCGAIGFARQVFDEMAVR 162
+ C+ +S L H+ TL+T + + +L+ + + +A +VFD +
Sbjct: 56 ETCSDMSQLKQ---LHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENH 112
Query: 163 TVVTWSSMIAAYVGSNS-PSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGES 220
+ W+++I A S EA ++++M E P+ T +L AC+ + S G+
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
+H I ++ V + L +Y CG + A VF+ MPE++L S+ MI AL G
Sbjct: 173 VHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGE 232
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY- 339
+ LF +M+ +PDG + +LSAC+ +G + G ++R ++ +++
Sbjct: 233 YDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 340 -GCMVDLLARAGLIQEAYDIIKNMPMEP----NAVIL 371
++++ + G ++ A + + M NA+IL
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMIL 328
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 254/449 (56%), Gaps = 53/449 (11%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTP---LESLVFFRRLQRSGLSPDNFTYP 102
L +A FN +P F+WNTIIR + S + +F+ + + P+ FT+P
Sbjct: 74 DLDYAHKIFNQMP-QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 103 FALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI------------- 149
LKACA+ + G H L LK G D + + L++ Y CG +
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 150 ------------------------GF--------ARQVFDEMAVRTVVTWSSMIAAYVGS 177
G+ AR +FD+M R+VV+W++MI+ Y +
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 178 NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
+A+ VF+EM+ + +PN VTLVS+L A S++ ++ GE +H Y + + + LG
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLK 297
+AL +MY+KCG+++KA+ VF +P +N+ +++ MI+ HG D I F +M G++
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 298 PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYD 357
P +++ +L+ACSH GLV+EG+ YF +MV + ++P +EHYGCMVDLL R+GL+ EA +
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 358 IIKNMPMEPNAVILRSFLGACRNQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCA 414
I NMP++P+ VI ++ LGACR QG+V + + LM + + GA YV +N++++
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGA-YVALSNMYASQG 491
Query: 415 SWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+W + S +RL MK+K ++K+PGCS +++
Sbjct: 492 NWSEVSEMRLRMKEKDIRKDPGCSLIDID 520
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 140/315 (44%), Gaps = 66/315 (20%)
Query: 108 CARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG----AIGFARQVFDEMAVRT 163
C + LS H++ +K+G D +L+F A + +A ++F++M R
Sbjct: 33 CRTIRDLSQ---IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 164 VVTWSSMIAAYVGSNSPSE--ALHVFQEMRLANE--KPNSVTLVSLLSACSKMVNVSAGE 219
+W+++I + S+ A+ +F EM +++E +PN T S+L AC+K + G+
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVLKACAKTGKIQEGK 148
Query: 220 SIH-----------SYITRNHVDMSVELG------------------------------- 237
IH ++ N V M V G
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 238 ---TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM 294
+ + Y + G K A ++F+ M ++++ S+ MIS +G KD + +F +M+
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYF----DRMVRMYNIKPSVEHYGCMVDLLARAG 350
++P+ ++ +L A S +G ++ G+ D +R+ ++ S ++D+ ++ G
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA-----LIDMYSKCG 323
Query: 351 LIQEAYDIIKNMPME 365
+I++A + + +P E
Sbjct: 324 IIEKAIHVFERLPRE 338
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 238/417 (57%), Gaps = 35/417 (8%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSG--LSPDNFTYPFALKACARVSSLSHGG 118
P LFA N++IRA SP P +S F+RR+ SG L PDN+T F ++AC + G
Sbjct: 69 PTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGL 128
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYAD-------------------------------CG 147
H +T++ G +D + L+ YA+ CG
Sbjct: 129 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCG 188
Query: 148 AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
+ FAR++F+ M R + W++MI+ Y EAL+VF M+L K N V ++S+LS
Sbjct: 189 DVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLS 248
Query: 208 ACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQS 267
AC+++ + G HSYI RN + ++V L T L ++YAKCG M+KA+ VF M EKN+ +
Sbjct: 249 ACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYT 308
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
++ ++ L +G + + LF+ M+ G+ P+ ++F +L CS +G VDEG+ +FD M
Sbjct: 309 WSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMR 368
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP-- 385
+ I+P +EHYGC+VDL ARAG +++A II+ MPM+P+A + S L A R ++
Sbjct: 369 NEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELG 428
Query: 386 SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
L K M +LE+ YVL +N+++ W + S++R +MK KG++K PGCS +EV
Sbjct: 429 VLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEV 485
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 237/401 (59%), Gaps = 4/401 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
S+ +A S F + P F +NT+IR N + E+L F+ + + G PDNFTYP L
Sbjct: 81 SMNYAASIFRGID-DPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
KAC R+ S+ G H K GL +D + N+L+ Y CG + + VF+++ +T
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+WSSM++A G SE L +F+ M N K +VS L AC+ ++ G SIH +
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ RN ++++ + T+L +MY KCG + KAL +F M ++N +++ MIS L HG +
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
+ +F++M GL+PD + + +L+ACSH GLV EG+ F M++ ++P+ EHYGC+VD
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGAN 402
LL RAGL++EA + I+++P+E N VI R+FL CR + ++ + + + KL S +
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 403 YVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
Y+L +N++S W D + R + KGLK+ PG S +E++
Sbjct: 440 YLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELK 480
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 240/407 (58%), Gaps = 5/407 (1%)
Query: 41 SASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFT 100
S + S+ +A+ F ++ P + +N++ R + PLE F + G+ PDN+T
Sbjct: 73 SPTESSMSYARHLFEAMS-EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYT 131
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA 160
+P LKACA +L G H L++K GL + Y TL+ Y +C + AR VFD +
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
VV +++MI Y N P+EAL +F+EM+ KPN +TL+S+LS+C+ + ++ G+
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
IH Y ++ V++ TAL +M+AKCG + A+ +F M K+ Q+++ MI A NHG
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG 340
+ + +F +M ++PD ++F +L+ACSH G V+EG+ YF +MV + I PS++HYG
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYG 371
Query: 341 CMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSK---LES 397
MVDLL+RAG +++AY+ I +P+ P ++ R L AC + ++ L +K+ + L+
Sbjct: 372 SMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNL-DLAEKVSERIFELDD 430
Query: 398 ELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
G +YV+ +N+++ W+ +LR MK + K PGCS +EV N
Sbjct: 431 SHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 287 bits (735), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 244/412 (59%), Gaps = 9/412 (2%)
Query: 40 LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNF 99
L+ S ++ + F S+P+ P F +N++I++ + PL + ++RR+ S +SP N+
Sbjct: 50 LACSARAIAYTHLLFLSVPL-PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNY 108
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
T+ +K+CA +S+L G H + +G D Y L+ FY+ CG + ARQVFD M
Sbjct: 109 TFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRM 168
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
+++V W+S+++ + + EA+ VF +MR + +P+S T VSLLSAC++ VS G
Sbjct: 169 PEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS 228
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
+H YI +D++V+LGTAL +Y++CG + KA VF+ M E N+ ++T MISA G HG
Sbjct: 229 WVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHG 288
Query: 280 CQKDVISLFTQME-DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
+ + LF +ME D G P+ ++F +LSAC+H GLV+EG+ + RM + Y + P VEH
Sbjct: 289 YGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEH 348
Query: 339 YGCMVDLLARAGLIQEAYDIIKNMPMEPNAV---ILRSFLGAC---RNQGSVPSLDDKLM 392
+ CMVD+L RAG + EAY I + A + + LGAC RN + +L+
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI 408
Query: 393 SKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ LE + ++V+ +N+++ + S++R M + L+K G S +EV+N
Sbjct: 409 A-LEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVEN 459
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 146/323 (45%), Gaps = 8/323 (2%)
Query: 94 LSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFAR 153
++ ++ Y ++A RV L H+ + TG L+ AI +
Sbjct: 5 VAANSAAYEAIVRAGPRVKQLQQ---VHAHLIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
+F + + ++S+I + P + ++ M +N P++ T S++ +C+ +
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 214 NVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMIS 273
+ G+ +H + + + + AL Y+KCG M+ A VF+ MPEK++ ++ ++S
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVS 181
Query: 274 ALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIK 333
+G + I +F QM + G +PD +F +LSAC+ G V G + + + +
Sbjct: 182 GFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGS-WVHQYIISEGLD 240
Query: 334 PSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMS 393
+V+ +++L +R G + +A ++ M E N + + A G + L +
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVE-LFN 298
Query: 394 KLESELG--ANYVLTANVFSTCA 414
K+E + G N V V S CA
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACA 321
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/425 (35%), Positives = 237/425 (55%), Gaps = 10/425 (2%)
Query: 29 DHNPYLISQFLLSASTI-SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFR 87
D +P+L ++ + S + S+ +A+ F+ ++ WN + RAL + E L +
Sbjct: 109 DQDPFLATKLIGMYSDLGSVDYARKVFDKTR-KRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 88 RLQRSGLSPDNFTYPFALKACA----RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFY 143
++ R G+ D FTY + LKAC V+ L G H+ + G SS Y TL+ Y
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227
Query: 144 ADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM--RLANEKPNSVT 201
A G + +A VF M VR VV+WS+MIA Y + EAL F+EM + PNSVT
Sbjct: 228 ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVT 287
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP 261
+VS+L AC+ + + G+ IH YI R +D + + +AL MY +CG ++ VF+ M
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 262 EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKM 321
++++ S+ +IS+ G HG K I +F +M G P ++F +L ACSH GLV+EGK
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 322 YFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQ 381
F+ M R + IKP +EHY CMVDLL RA + EA ++++M EP + S LG+CR
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467
Query: 382 GSVPSLD--DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSW 439
G+V + + + LE + NYVL A++++ W + ++ ++ +GL+K PG W
Sbjct: 468 GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCW 527
Query: 440 LEVQN 444
+EV+
Sbjct: 528 MEVRR 532
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 11/276 (3%)
Query: 95 SPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQ 154
SP TY + C SSLS H L G D + L+ Y+D G++ +AR+
Sbjct: 74 SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARK 133
Query: 155 VFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC----S 210
VFD+ RT+ W+++ A + E L ++ +M + + T +L AC
Sbjct: 134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASEC 193
Query: 211 KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTI 270
+ ++ G+ IH+++TR V + T L +MYA+ G + A VF MP +N+ S++
Sbjct: 194 TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSA 253
Query: 271 MISALGNHGCQKDVISLFTQM--EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
MI+ +G + + F +M E P+ ++ +L AC+ + +++GK+ ++R
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 329 --MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+ +I P + +V + R G ++ + M
Sbjct: 314 RGLDSILPVI---SALVTMYGRCGKLEVGQRVFDRM 346
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/425 (37%), Positives = 247/425 (58%), Gaps = 18/425 (4%)
Query: 30 HNPYLISQFLLSASTISLP----FAKSFF-NSLPITPPLFAWNTIIRALANSPTPLESLV 84
++ ++IS+ L+ S++SL FA++ +S TP WN + R ++S +P+ES+
Sbjct: 43 NDSFIISE-LVRVSSLSLAKDLAFARTLLLHSSDSTPS--TWNMLSRGYSSSDSPVESIW 99
Query: 85 FFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYA 144
+ ++R G+ P+ T+PF LKACA L+ G LK G D Y N L+ Y
Sbjct: 100 VYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYG 159
Query: 145 DCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVS 204
C AR+VFDEM R VV+W+S++ A V + + F EM P+ T+V
Sbjct: 160 TCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVV 219
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
LLSAC N+S G+ +HS + ++++ LGTAL +MYAK G ++ A LVF M +KN
Sbjct: 220 LLSACGG--NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQ-MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF 323
+ +++ MI L +G ++ + LF++ M++ ++P+ ++F +L ACSH GLVD+G YF
Sbjct: 278 VWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYF 337
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR---- 379
M +++ IKP + HYG MVD+L RAG + EAYD IK MP EP+AV+ R+ L AC
Sbjct: 338 HEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
Query: 380 --NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGC 437
++G + +L+ +LE + N V+ AN F+ W +A+ +R MK+ +KK G
Sbjct: 398 EDDEGIGEKVKKRLI-ELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGE 456
Query: 438 SWLEV 442
S LE+
Sbjct: 457 SCLEL 461
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 224/404 (55%), Gaps = 12/404 (2%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L AK+ F + + ++ ++I A E++ F ++ G+SPD +T L
Sbjct: 347 LDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
CAR L G H + L D + N L+ YA CG++ A VF EM V+ +++
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465
Query: 167 WSSMIAAYVGSNSPSEALHVF----QEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
W+++I Y + +EAL +F +E R + P+ T+ +L AC+ + G IH
Sbjct: 466 WNTIIGGYSKNCYANEALSLFNLLLEEKRFS---PDERTVACVLPACASLSAFDKGREIH 522
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
YI RN + +L +MYAKCG + A ++F+ + K+L S+T+MI+ G HG K
Sbjct: 523 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 582
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCM 342
+ I+LF QM G++ D +SF +L ACSH GLVDEG +F+ M I+P+VEHY C+
Sbjct: 583 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 343 VDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSK---LESEL 399
VD+LAR G + +AY I+NMP+ P+A I + L CR V L +K+ K LE E
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVK-LAEKVAEKVFELEPEN 701
Query: 400 GANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
YVL AN+++ W+ LR + Q+GL+KNPGCSW+E++
Sbjct: 702 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIK 745
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 164/319 (51%), Gaps = 2/319 (0%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A F+ + I LF WN ++ LA S S+ F+++ SG+ D++T+ K
Sbjct: 145 LKEASRVFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
+ + + S+ G H LK+G N+L+ FY + AR+VFDEM R V++
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+S+I YV + + L VF +M ++ + + T+VS+ + C+ +S G ++HS
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+ L +MY+KCG + A VF M ++++ S+T MI+ G + +
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF +ME+ G+ PD + + +L+ C+ L+DEGK + ++ ++ + ++D+
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMY 442
Query: 347 ARAGLIQEAYDIIKNMPME 365
A+ G +QEA + M ++
Sbjct: 443 AKCGSMQEAELVFSEMRVK 461
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 155/303 (51%), Gaps = 5/303 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ + + +WN+II ++ + L F ++ SG+ D T CA
Sbjct: 249 ARKVFDEMT-ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+S G HS+ +K S + NTLL Y+ CG + A+ VF EM+ R+VV+++S
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MIA Y EA+ +F+EM P+ T+ ++L+ C++ + G+ +H +I N
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ + + AL +MYAKCG M++A LVF+ M K++ S+ +I + + +SLF
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 290 -QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG-CMVDLLA 347
+E+ PD + + +L AC+ + D+G+ ++R N S H +VD+ A
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR--NGYFSDRHVANSLVDMYA 545
Query: 348 RAG 350
+ G
Sbjct: 546 KCG 548
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 33/307 (10%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L+ CA SL G + G D + L Y +CG + A +VFDE+ +
Sbjct: 101 LQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKA 160
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+ W+ ++ S S ++ +F++M + + +S T + + S + +V GE +H +
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
I ++ +G +L Y K + A VF+ M E+++ S+ +I+ ++G +
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG--------KMYFDRMVRMYNI---- 332
+S+F QM G++ D + + + C+ L+ G K F R R N
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 333 ------------------KPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME---PNAVIL 371
SV Y M+ AR GL EA + + M E P+ +
Sbjct: 341 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 400
Query: 372 RSFLGAC 378
+ L C
Sbjct: 401 TAVLNCC 407
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
TL S+L C+ ++ G+ + ++I N + LG+ L MY CG +K+A VF+ +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+ + I+++ L G I LF +M G++ D +FS + + S + V G+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 151/436 (34%), Positives = 238/436 (54%), Gaps = 41/436 (9%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS-PDNFTYPFA 104
+ +A FN + P +F +N+IIRA ++ + + +++L R PD FT+PF
Sbjct: 57 DMDYATRLFNQVS-NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFM 115
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-- 162
K+CA + S G H K G T+N L+ Y + A +VFDEM R
Sbjct: 116 FKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV 175
Query: 163 -----------------------------TVVTWSSMIAAYVGSNSPSEALHVFQEMRLA 193
T+V+W++MI+ Y G EA+ F+EM+LA
Sbjct: 176 ISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 194 NEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
+P+ ++L+S+L +C+++ ++ G+ IH Y R + AL EMY+KCG++ +A
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 254 LLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
+ +F M K++ S++ MIS HG I F +M+ +KP+G++F +LSACSH+
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV 355
Query: 314 GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRS 373
G+ EG YFD M + Y I+P +EHYGC++D+LARAG ++ A +I K MPM+P++ I S
Sbjct: 356 GMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGS 415
Query: 374 FLGACRNQGSVPSLDDKLMS-----KLESELGANYVLTANVFSTCASWKDASNLRLAMKQ 428
L +CR G +LD L++ +LE E NYVL AN+++ W+D S LR ++
Sbjct: 416 LLSSCRTPG---NLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRN 472
Query: 429 KGLKKNPGCSWLEVQN 444
+ +KK PG S +EV N
Sbjct: 473 ENMKKTPGGSLIEVNN 488
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 155/351 (44%), Gaps = 69/351 (19%)
Query: 97 DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF 156
+N+ PF RV S + ++ + GLS + ++ F + +A ++F
Sbjct: 10 ENYFIPF----LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLF 65
Query: 157 DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNV 215
++++ V ++S+I AY ++ + + +++++ R + E P+ T + +C+ + +
Sbjct: 66 NQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC 125
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEM-------------------------------Y 244
G+ +H ++ + V AL +M Y
Sbjct: 126 YLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGY 185
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
A+ G MKKA +F+ M +K + S+T MIS GC + + F +M+ G++PD +S
Sbjct: 186 ARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLI 245
Query: 305 VILSACSHMGLVDEGK---MYFDR------------MVRMYN----IKPSVEHYGCM--V 343
+L +C+ +G ++ GK +Y +R ++ MY+ I +++ +G M
Sbjct: 246 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 344 DLLARAGLIQ------------EAYDIIKNMPMEPNAVILRSFLGACRNQG 382
D+++ + +I E ++ ++ ++PN + L AC + G
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/450 (35%), Positives = 246/450 (54%), Gaps = 42/450 (9%)
Query: 35 ISQFLLSASTIS-LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLE---SLVFFRRLQ 90
+++F+ + S L +A S F P P + NT+IRAL+ P ++ +R+L
Sbjct: 50 VAKFIEACSNAGHLRYAYSVFTHQP-CPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLW 108
Query: 91 RSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIG 150
PD FT+PF LK RVS + G H + G S + L++ Y CG +G
Sbjct: 109 ALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLG 168
Query: 151 FARQVFDEMAVRTV---------------------------------VTWSSMIAAYVGS 177
AR++FDEM V+ V V+W+ +I+ Y S
Sbjct: 169 DARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKS 228
Query: 178 NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
SEA+ VFQ M + N +P+ VTL+++LSAC+ + ++ GE I SY+ ++ +V L
Sbjct: 229 GRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLN 288
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLK 297
A+ +MYAK G + KAL VF + E+N+ ++T +I+ L HG + +++F +M G++
Sbjct: 289 NAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR 348
Query: 298 PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYD 357
P+ ++F ILSACSH+G VD GK F+ M Y I P++EHYGCM+DLL RAG ++EA +
Sbjct: 349 PNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADE 408
Query: 358 IIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMS---KLESELGANYVLTANVFSTCA 414
+IK+MP + NA I S L A + L ++ +S KLE NY+L AN++S
Sbjct: 409 VIKSMPFKANAAIWGSLLAASNVHHDL-ELGERALSELIKLEPNNSGNYMLLANLYSNLG 467
Query: 415 SWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
W ++ +R MK G+KK G S +EV+N
Sbjct: 468 RWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 228/401 (56%), Gaps = 4/401 (0%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ F +P L AWN++I+ + R+ G P T L
Sbjct: 259 LEVAREVFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILM 317
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
AC+R +L HG H +++ +++D Y + +L+ Y CG A VF + +
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+ MI++Y+ + +A+ V+ +M KP+ VT S+L ACS++ + G+ IH I+
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS 437
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+ ++ L +AL +MY+KCG K+A +FNS+P+K++ S+T+MISA G+HG ++ +
Sbjct: 438 ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
F +M+ GLKPDG++ +LSAC H GL+DEG +F +M Y I+P +EHY CM+D+L
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 347 ARAGLIQEAYDIIKNMP-MEPNAVILRSFLGAC--RNQGSVPSLDDKLMSKLESELGANY 403
RAG + EAY+II+ P NA +L + AC + S+ +L+ + + + Y
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTY 617
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
++ N++++ SW A +RL MK+ GL+K PGCSW+E+ +
Sbjct: 618 MVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSD 658
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 183/380 (48%), Gaps = 35/380 (9%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F+ +P + +WNT+I S ++L F R++ SG P++ + A+ AC+R+
Sbjct: 165 FDEMP-ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLW 223
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
L G H +K G D Y ++ L+ Y C + AR+VF +M +++V W+SMI
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKG 283
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
YV + + M + +P+ TL S+L ACS+ N+ G+ IH Y+ R+ V+
Sbjct: 284 YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNAD 343
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
+ + +L ++Y KCG A VF+ + +S+ +MIS+ + G + ++ QM
Sbjct: 344 IYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS 403
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGK-----------------------MYF-----DR 325
+G+KPD ++F+ +L ACS + +++GK MY
Sbjct: 404 VGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKE 463
Query: 326 MVRMYNIKP--SVEHYGCMVDLLARAGLIQEA---YDIIKNMPMEPNAVILRSFLGACRN 380
R++N P V + M+ G +EA +D ++ ++P+ V L + L AC +
Sbjct: 464 AFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGH 523
Query: 381 QGSVPSLDDKLMSKLESELG 400
G + K S++ S+ G
Sbjct: 524 AGLIDE-GLKFFSQMRSKYG 542
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 37/407 (9%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS-PDNFTYPFALKAC 108
A+ F + I ++ WN+++ + + ++L F+RL + PD+FT+P +KA
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+ G + H+L +K+G D ++L+ YA + QVFDEM R V +W+
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
++I+ + S +AL +F M + +PNSV+L +SACS+++ + G+ IH +
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
++ + +AL +MY KC ++ A VF MP K+L ++ MI G K + +
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR---------------MY--- 330
+M G +P + + IL ACS + GK ++R +Y
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 331 ---NIKPSV---------EHYGCMVDLLARAG---LIQEAYDIIKNMPMEPNAVILRSFL 375
N+ +V E + M+ G E YD + ++ ++P+ V S L
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 376 GACRNQGSVPSLDDKLMSKLESELGANYVLTA---NVFSTCASWKDA 419
AC ++ +S ES L + +L + +++S C + K+A
Sbjct: 418 PACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEA 464
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 234/420 (55%), Gaps = 5/420 (1%)
Query: 29 DHNPYLISQFLLSASTISL-PFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFR 87
D +P++ + + S+ L FA F+ + W +I + + E++V+F
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAE-DKDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 88 RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTG-LSSDCYTDNTLLKFYADC 146
++++G++ + T LKA +V + G H L L+TG + D + ++L+ Y C
Sbjct: 194 EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
A++VFDEM R VVTW+++IA YV S + + VF+EM ++ PN TL S+L
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
SAC+ + + G +H Y+ +N ++++ GT L ++Y KCG +++A+LVF + EKN+
Sbjct: 314 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
++T MI+ HG +D LF M + P+ ++F +LSAC+H GLV+EG+ F M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC--RNQGSV 384
+N++P +HY CMVDL R GL++EA +I+ MPMEP V+ + G+C +
Sbjct: 434 KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYEL 493
Query: 385 PSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ KL+ Y L AN++S +W + + +R MK + + K+PG SW+EV+
Sbjct: 494 GKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKG 553
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 185/374 (49%), Gaps = 17/374 (4%)
Query: 66 WNTIIRALANSPTPLESLVF--FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
W+++I + T L F +R ++R+G+ P T+P LKA ++ S+ FH+
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAH 128
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
+K GL SD + N+L+ Y+ G FA ++FD + VVTW++MI +V + S SEA
Sbjct: 129 IVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEA 188
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS-YITRNHVDMSVELGTALFE 242
+ F EM+ N +T+VS+L A K+ +V G S+H Y+ V V +G++L +
Sbjct: 189 MVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVD 248
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MY KC A VF+ MP +N+ ++T +I+ C + +F +M + P+ +
Sbjct: 249 MYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVE----HYGCMVDLLARAGLIQEAYDI 358
S +LSAC+H+G + G R V Y IK S+E ++DL + G ++EA +
Sbjct: 309 LSSVLSACAHVGALHRG-----RRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 359 IKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASW-- 416
+ + E N + + G D + L S + N V V S CA
Sbjct: 364 FERL-HEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGL 422
Query: 417 -KDASNLRLAMKQK 429
++ L L+MK +
Sbjct: 423 VEEGRRLFLSMKGR 436
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/423 (34%), Positives = 225/423 (53%), Gaps = 37/423 (8%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + +WN I+ S E++V F+++ G PD T L + L+ G
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAI-----------------------GFAR-- 153
+ H +K GL D + ++ Y G + G +R
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 154 ---------QVFDEMAVR-TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLV 203
++F E + VV+W+S+IA + EAL +F+EM++A KPN VT+
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 204 SLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
S+L AC + + G S H + R H+ +V +G+AL +MYAKCG + + +VFN MP K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 264 NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF 323
NL + +++ HG K+V+S+F + LKPD +SF+ +LSAC +GL DEG YF
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS 383
M Y IKP +EHY CMV+LL RAG +QEAYD+IK MP EP++ + + L +CR Q +
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 384 V--PSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
V + + + LE E YVL +N+++ W + ++R M+ GLKKNPGCSW++
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 442 VQN 444
V+N
Sbjct: 633 VKN 635
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 181/436 (41%), Gaps = 73/436 (16%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A S+P P +++++++I AL + +S+ F R+ GL PD+ P K CA
Sbjct: 69 ADLVLQSIP-DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA 127
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+S+ G H ++ +GL D + ++ Y CG +G AR+VFD M+ + VVT S+
Sbjct: 128 ELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSA 187
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA--------------------- 208
++ AY E + + EM + + N V+ +LS
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 209 -CSKMVNVSA-------------GESIHSYITRNHVDMSVELGTALFEMYAKC------- 247
C V VS+ G IH Y+ + + + +A+ +MY K
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 248 ------------------------GLMKKALLVFNSMPEK----NLQSFTIMISALGNHG 279
GL+ KAL +F E+ N+ S+T +I+ +G
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
+ + LF +M+ G+KP+ ++ +L AC ++ + G+ VR++ + +V
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH-LLDNVHVG 426
Query: 340 GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESEL 399
++D+ A+ G I + + MP + N V S + G + S + + L
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 400 GANYVLTANVFSTCAS 415
+++ ++ S C
Sbjct: 486 KPDFISFTSLLSACGQ 501
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 149/355 (41%), Gaps = 46/355 (12%)
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H+ LK+G +D Y L+ Y++ A V + T+ ++SS+I A +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
++++ VF M P+S L +L C+++ G+ IH + +DM + ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
F MY +CG M A VF+ M +K++ + + ++ A GC ++V+ + ++ME G++ +
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 301 LSFSVILSACSHMGLVDEGKMYFD------------------------------RMVRMY 330
+S++ ILS + G E + F R++ Y
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 331 NIKPSVEHYGC----MVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPS 386
IK + C M+D+ ++G + + M V G RN
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN-----G 332
Query: 387 LDDKLMSKL----ESELGANYVLTANVFSTCA-SWKDASNLRL--AMKQKGLKKN 434
L DK + E + N V ++ + CA + KD L L M+ G+K N
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPN 387
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 237/401 (59%), Gaps = 3/401 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
SL A+ F+ + + + +WN++I A + P E+++ F+++ G+ P + + AL
Sbjct: 286 SLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
ACA + L G H L+++ GL + N+L+ Y C + A +F ++ RT+V
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV 404
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+W++MI + + P +AL+ F +MR KP++ T VS+++A +++ + IH +
Sbjct: 405 SWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
R+ +D +V + TAL +MYAKCG + A L+F+ M E+++ ++ MI G HG K +
Sbjct: 465 MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
LF +M+ +KP+G++F ++SACSH GLV+ G F M Y+I+ S++HYG MVDL
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGANY 403
L RAG + EA+D I MP++P + + LGAC+ +V + + + +L + G +
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYH 644
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
VL AN++ + W+ +R++M ++GL+K PGCS +E++N
Sbjct: 645 VLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKN 685
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 144/264 (54%), Gaps = 1/264 (0%)
Query: 58 PITPPL-FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH 116
PI L ++T+++ A ++L FF R++ + P + + + LK C + L
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVG 176
G H L +K+G S D + L YA C + AR+VFD M R +V+W++++A Y
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ AL + + M N KP+ +T+VS+L A S + +S G+ IH Y R+ D V +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
TAL +MYAKCG ++ A +F+ M E+N+ S+ MI A + K+ + +F +M D G+
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 297 KPDGLSFSVILSACSHMGLVDEGK 320
KP +S L AC+ +G ++ G+
Sbjct: 334 KPTDVSVMGALHACADLGDLERGR 357
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 34/370 (9%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P L +WNTI+ + + +L + + L P T L A +
Sbjct: 189 ARKVFDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ +S G H +++G S L+ YA CG++ ARQ+FD M R VV+W+S
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI AYV + +P EA+ +FQ+M KP V+++ L AC+ + ++ G IH
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+D +V + +L MY KC + A +F + + L S+ MI +G D ++ F+
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGK-----------------------MY---- 322
QM +KPD ++ +++A + + + K MY
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 323 ---FDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSFLG 376
R++ + V + M+D G + A ++ + M ++PN V S +
Sbjct: 488 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVIS 547
Query: 377 ACRNQGSVPS 386
AC + G V +
Sbjct: 548 ACSHSGLVEA 557
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 132/293 (45%), Gaps = 13/293 (4%)
Query: 90 QRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
+R+ + + + +P AL R SSL L K GL + + L+ + G++
Sbjct: 27 ERNYIPANVYEHPAAL-LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSV 85
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
A +VF+ + + V + +M+ + + +AL F MR + +P LL C
Sbjct: 86 DEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVC 145
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFT 269
+ G+ IH + ++ + + T L MYAKC + +A VF+ MPE++L S+
Sbjct: 146 GDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWN 205
Query: 270 IMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR- 328
+++ +G + + + M + LKP ++ +L A S + L+ GK +R
Sbjct: 206 TIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS 265
Query: 329 ----MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
+ NI + +VD+ A+ G ++ A + M +E N V S + A
Sbjct: 266 GFDSLVNISTA------LVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 271 bits (693), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/419 (36%), Positives = 235/419 (56%), Gaps = 10/419 (2%)
Query: 33 YLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS 92
+ +S+ LS + ++ F S + P L NT+IRA + S TP E FR L+R+
Sbjct: 48 HFLSRLALSLIPRDINYSCRVF-SQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRN 106
Query: 93 GLSPDN-FTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
P N + FALK C + L G H G SD TL+ Y+ C
Sbjct: 107 SSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTD 166
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE---KPNSVTLVSLLSA 208
A +VFDE+ R V+W+ + + Y+ + + L +F +M+ + KP+ VT + L A
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
C+ + + G+ +H +I N + ++ L L MY++CG M KA VF M E+N+ S+
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
T +IS L +G K+ I F +M G+ P+ + + +LSACSH GLV EG M+FDRM
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRS 346
Query: 329 -MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSL 387
+ IKP++ HYGC+VDLL RA L+ +AY +IK+M M+P++ I R+ LGACR G V L
Sbjct: 347 GEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDV-EL 405
Query: 388 DDKLMS---KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
++++S +L++E +YVL N +ST W+ + LR MK+K + PGCS +E+Q
Sbjct: 406 GERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQ 464
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 251/453 (55%), Gaps = 40/453 (8%)
Query: 29 DHNPYLISQFLLSA--STISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFF 86
+ P++ SA S+ + +A F + L PP + WN +IR +NS P +S+ +
Sbjct: 38 EEEPFVSQTLSFSALSSSGDVDYAYKFLSKLS-DPPNYGWNFVIRGFSNSRNPEKSISVY 96
Query: 87 RRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTL------- 139
++ R GL PD+ TYPF +K+ +R+S+ GG H +K+GL D + NTL
Sbjct: 97 IQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSF 156
Query: 140 ------------------------LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYV 175
L YA G + AR VFDEM+ R VVTWSSMI YV
Sbjct: 157 RDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYV 216
Query: 176 GSNSPSEALHVF-QEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
++AL +F Q MR+ + K N VT+VS++ AC+ + ++ G+++H YI H+ ++V
Sbjct: 217 KRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTV 276
Query: 235 ELGTALFEMYAKCGLMKKALLVF--NSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
L T+L +MYAKCG + A VF S+ E + + +I L +HG ++ + LF +M
Sbjct: 277 ILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR 336
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
+ + PD ++F +L+ACSH GLV E +F + ++ +P EHY CMVD+L+RAGL+
Sbjct: 337 ESKIDPDEITFLCLLAACSHGGLVKEAWHFF-KSLKESGAEPKSEHYACMVDVLSRAGLV 395
Query: 353 QEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD--DKLMSKLESELGANYVLTANVF 410
++A+D I MP++P +L + L C N G++ + K + +L+ YV ANV+
Sbjct: 396 KDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVY 455
Query: 411 STCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+ ++ A ++R AM++KG+KK G S L++
Sbjct: 456 AINKQFRAARSMREAMEKKGVKKIAGHSILDLD 488
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/447 (34%), Positives = 241/447 (53%), Gaps = 43/447 (9%)
Query: 40 LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALAN---SPTPLESLVFFRRLQRSGLSP 96
+S + +A F+ + F WN IIRA+ + SP + + R++ +SP
Sbjct: 1 MSKGAAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSP 60
Query: 97 DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA-------- 148
D T+PF L + L G H+ L GL D + +LL Y+ CG
Sbjct: 61 DFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVF 120
Query: 149 -----------------------IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
I AR++FDEM R V++WS +I YV EAL
Sbjct: 121 DDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALD 180
Query: 186 VFQEMRLA--NE---KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+F+EM+L NE +PN T+ ++LSAC ++ + G+ +H+YI + HV++ + LGTAL
Sbjct: 181 LFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTAL 240
Query: 241 FEMYAKCGLMKKALLVFNSM-PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM-GLKP 298
+MYAKCG +++A VFN++ +K++++++ MI L +G + LF++M + P
Sbjct: 241 IDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINP 300
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
+ ++F IL AC H GL++EGK YF M+ + I PS++HYGCMVDL R+GLI+EA
Sbjct: 301 NSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESF 360
Query: 359 IKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGANYVLTANVFSTCASW 416
I +MPMEP+ +I S L R G + + + K + +L+ YVL +NV++ W
Sbjct: 361 IASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRW 420
Query: 417 KDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+ +R M+ KG+ K PGCS++EV+
Sbjct: 421 MEVKCIRHEMEVKGINKVPGCSYVEVE 447
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 228/391 (58%), Gaps = 15/391 (3%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRS-GLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
WN +I + + E+L+ F ++ S GL ++ T + AC R + S H
Sbjct: 372 WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
+K GL D + NTL+ Y+ G I A ++F +M R +VTW++MI YV S +AL
Sbjct: 432 VKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDAL 491
Query: 185 HVFQEMR-----------LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
+ +M+ + KPNS+TL+++L +C+ + ++ G+ IH+Y +N++
Sbjct: 492 LLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATD 551
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
V +G+AL +MYAKCG ++ + VF+ +P+KN+ ++ ++I A G HG ++ I L M
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMV 611
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
G+KP+ ++F + +ACSH G+VDEG F M Y ++PS +HY C+VDLL RAG I+
Sbjct: 612 QGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIK 671
Query: 354 EAYDIIKNMPMEPN-AVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVF 410
EAY ++ MP + N A S LGA R N + + + + +LE + ++YVL AN++
Sbjct: 672 EAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIY 731
Query: 411 STCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
S+ W A+ +R MK++G++K PGCSW+E
Sbjct: 732 SSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 171/365 (46%), Gaps = 15/365 (4%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L WNT++ +L + LE+L + R + G+ PD FT L AC+ + L G H+
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 123 LTLKTG-LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
LK G L + + + L+ Y +C + R+VFD M R + W++MIA Y +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 182 EALHVFQEMRL-ANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EAL +F M A NS T+ ++ AC + S E+IH ++ + +D + L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM------ 294
+MY++ G + A+ +F M +++L ++ MI+ +D + L +M+++
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 295 -----GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
LKP+ ++ IL +C+ + + +GK ++ N+ V +VD+ A+
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATDVAVGSALVDMYAKC 565
Query: 350 GLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANV 409
G +Q + + +P + N + + A G+ D L + + N V +V
Sbjct: 566 GCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 410 FSTCA 414
F+ C+
Sbjct: 625 FAACS 629
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 148/297 (49%), Gaps = 10/297 (3%)
Query: 31 NPYLISQFLLSAS---TISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFR 87
+PYL+ SA+ ++ A S F S +P W ++R+ S E+++ +
Sbjct: 29 HPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEW--WIDLLRSKVRSNLLREAVLTYV 86
Query: 88 RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYT-DNTLLKFYADC 146
+ G+ PDN+ +P LKA A + + G H+ K G D T NTL+ Y C
Sbjct: 87 DMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC 146
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G G +VFD ++ R V+W+S+I++ AL F+ M N +P+S TLVS++
Sbjct: 147 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 206
Query: 207 SACSKM---VNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
+ACS + + G+ +H+Y R S + T L MY K G + + ++ S +
Sbjct: 207 TACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGR 265
Query: 264 NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+L ++ ++S+L + + + +M G++PD + S +L ACSH+ ++ GK
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 144/307 (46%), Gaps = 15/307 (4%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARV---SSLSHGGVFH 121
+WN++I +L + +L FR + + P +FT + AC+ + L G H
Sbjct: 166 SWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVH 225
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
+ L+ G + + NTL+ Y G + ++ + R +VTW++++++ +
Sbjct: 226 AYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLL 284
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN-HVDMSVELGTAL 240
EAL +EM L +P+ T+ S+L ACS + + G+ +H+Y +N +D + +G+AL
Sbjct: 285 EALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSAL 344
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED-MGLKPD 299
+MY C + VF+ M ++ + + MI+ + K+ + LF ME+ GL +
Sbjct: 345 VDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH----YGCMVDLLARAGLIQEA 355
+ + ++ AC V G + + +K ++ ++D+ +R G I A
Sbjct: 405 STTMAGVVPAC-----VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIA 459
Query: 356 YDIIKNM 362
I M
Sbjct: 460 MRIFGKM 466
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 238/430 (55%), Gaps = 34/430 (7%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L +A F+ + P LF +N +IR + P ++ F+ ++ +S + PDN T+PF +K
Sbjct: 67 LGYAYGIFSQIQ-NPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI----------GF----- 151
A + + + G HS ++ G +D Y +N+L+ YA+CG I GF
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 152 ----------------ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE 195
AR++FDEM R + TWS MI Y +N +A+ +F+ M+
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 196 KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALL 255
N +VS++S+C+ + + GE + Y+ ++H+ +++ LGTAL +M+ +CG ++KA+
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 256 VFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
VF +PE + S++ +I L HG + F+QM +G P ++F+ +LSACSH GL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
V++G ++ M + + I+P +EHYGC+VD+L RAG + EA + I M ++PNA IL + L
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 376 GACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKK 433
GAC+ V ++ K++ E YVL +N+++ W +LR MK+K +KK
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 434 NPGCSWLEVQ 443
PG S +E+
Sbjct: 486 PPGWSLIEID 495
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 42/297 (14%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD-------CGAIGFARQVFD 157
L++C+ S L + H L+T L SD + + LL D +G+A +F
Sbjct: 19 LQSCSSFSDLK---IIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 158 EMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSA 217
++ + ++ +I + PS+A + +M + P+++T L+ A S+M V
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 218 GESIHSYITRNHVDMSVELGTALFEMYA-------------------------------K 246
GE HS I R V + +L MYA K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 247 CGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVI 306
CG+++ A +F+ MP +NL +++IMI+ + C + I LF M+ G+ + +
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 307 LSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
+S+C+H+G ++ G+ ++ +V+ + + ++ +VD+ R G I++A + + +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 268 bits (684), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 233/437 (53%), Gaps = 36/437 (8%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG--LSPDNF 99
AS + +A F + P F WNTIIR + S P ++ F + S + P
Sbjct: 69 ASPSDMNYAYLVFTRINHKNP-FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRL 127
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA----------- 148
TYP KA R+ G H + +K GL D + NT+L Y CG
Sbjct: 128 TYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 149 IGF--------------------ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQ 188
IGF A+ +FDEM R V+W+SMI+ +V + +AL +F+
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 189 EMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG 248
EM+ + KP+ T+VSLL+AC+ + G IH YI RN +++ + TAL +MY KCG
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 249 LMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
+++ L VF P+K L + MI L N+G ++ + LF+++E GL+PD +SF +L+
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 309 ACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNA 368
AC+H G V +F M Y I+PS++HY MV++L AGL++EA +IKNMP+E +
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
Query: 369 VILRSFLGACRNQGSVPSLDD--KLMSKLESELGANYVLTANVFSTCASWKDASNLRLAM 426
VI S L ACR G+V K + KL+ + YVL +N +++ +++A RL M
Sbjct: 428 VIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLM 487
Query: 427 KQKGLKKNPGCSWLEVQ 443
K++ ++K GCS +EV
Sbjct: 488 KERQMEKEVGCSSIEVD 504
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 232/413 (56%), Gaps = 33/413 (7%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFH- 121
+F+WN +I ES+ ++R+ +SP + T L AC++V H
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 122 ---------SLTLKTGL---------------------SSDCYTDNTLLKFYADCGAIGF 151
SL L+ L + D + +++K Y + G +
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
AR FD+M VR ++W+ MI Y+ + +E+L +F+EM+ A P+ T+VS+L+AC+
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
+ ++ GE I +YI +N + V +G AL +MY KCG +KA VF+ M +++ ++T M
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN 331
+ L N+G ++ I +F QM+DM ++PD +++ +LSAC+H G+VD+ + +F +M +
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDD 389
I+PS+ HYGCMVD+L RAGL++EAY+I++ MPM PN+++ + LGA R N + L
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 390 KLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
K + +LE + GA Y L N+++ C WKD +R + +KK PG S +EV
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEV 613
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 185/417 (44%), Gaps = 67/417 (16%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ +A F +P P + WN +I+ + E + + + + G++PD+ T+PF L
Sbjct: 84 VSYAYKLFVKIP-EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLN 142
Query: 107 ACARVS-SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
R +L+ G H +K GL S+ Y N L+K Y+ CG + AR VFD V
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+W+ MI+ Y E++ + EM P SVTL+ +LSACSK+ + + +H Y+
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS-------------------------- 259
+ + S+ L AL YA CG M A+ +F S
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 260 -----MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
MP ++ S+TIMI GC + + +F +M+ G+ PD + +L+AC+H+G
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 315 LVDEG---KMYFDR------------MVRMY------NIKPSVEH---------YGCMVD 344
++ G K Y D+ ++ MY V H + MV
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 345 LLARAGLIQEAYDI---IKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE 398
LA G QEA + +++M ++P+ + L AC + G V K +K+ S+
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQA-RKFFAKMRSD 498
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 117/246 (47%), Gaps = 4/246 (1%)
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYAD--CGAIGFARQVFDEMAVRTVVTWSSMIAAYVGS 177
HS ++ G++ + L F+ G + +A ++F ++ VV W++MI +
Sbjct: 53 LHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKV 112
Query: 178 NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN-VSAGESIHSYITRNHVDMSVEL 236
+ E + ++ M P+S T LL+ + ++ G+ +H ++ + + ++ +
Sbjct: 113 DCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYV 172
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
AL +MY+ CGLM A VF+ ++++ S+ +MIS ++ I L +ME +
Sbjct: 173 QNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLV 232
Query: 297 KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAY 356
P ++ ++LSACS + D K + V +PS+ +V+ A G + A
Sbjct: 233 SPTSVTLLLVLSACSKVKDKDLCKRVHE-YVSECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 357 DIIKNM 362
I ++M
Sbjct: 292 RIFRSM 297
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/485 (31%), Positives = 258/485 (53%), Gaps = 78/485 (16%)
Query: 31 NPYLISQFLLSASTISLP----FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFF 86
N ++ + + SAS +S+P +A F+ +P P + N ++R A S P +++ +
Sbjct: 43 NLSVVGELIYSAS-LSVPGALKYAHKLFDEIP-KPDVSICNHVLRGSAQSMKPEKTVSLY 100
Query: 87 RRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKT------------------- 127
+++ G+SPD +T+ F LKAC+++ S+G FH ++
Sbjct: 101 TEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANC 160
Query: 128 ---GLSSDCYTD----------------------------------------NTLLKFYA 144
G++S+ + D N ++
Sbjct: 161 GDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCL 220
Query: 145 DCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVS 204
C + AR++FD + VVTW++MI+ YV P EAL +F+EMR A E P+ VT++S
Sbjct: 221 KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILS 280
Query: 205 LLSACSKMVNVSAGESIHSYITRN-HVDMSVELGT----ALFEMYAKCGLMKKALLVFNS 259
LLSAC+ + ++ G+ +H YI V S+ +GT AL +MYAKCG + +A+ VF
Sbjct: 281 LLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG 340
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
+ +++L ++ +I L H + I +F +M+ + + P+ ++F ++ ACSH G VDEG
Sbjct: 341 VKDRDLSTWNTLIVGLALHHAEGS-IEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEG 399
Query: 320 KMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR 379
+ YF M MYNI+P+++HYGCMVD+L RAG ++EA+ +++M +EPNA++ R+ LGAC+
Sbjct: 400 RKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACK 459
Query: 380 NQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPG 436
G+V ++KL+S + E G +YVL +N++++ W +R +KK G
Sbjct: 460 IYGNVELGKYANEKLLSMRKDESG-DYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTG 518
Query: 437 CSWLE 441
S +E
Sbjct: 519 VSLIE 523
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 231/412 (56%), Gaps = 9/412 (2%)
Query: 40 LSASTISLPFA----KSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS 95
+ A T +PF + F +P + ++NTII A S ++L R + + L
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMP-RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 96 PDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQV 155
PD+FT L + + G H ++ G+ SD Y ++L+ YA I + +V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 156 FDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNV 215
F + R ++W+S++A YV + +EAL +F++M A KP +V S++ AC+ + +
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
G+ +H Y+ R ++ + +AL +MY+KCG +K A +F+ M + S+T +I
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGH 419
Query: 276 GNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
HG + +SLF +M+ G+KP+ ++F +L+ACSH+GLVDE YF+ M ++Y +
Sbjct: 420 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQE 479
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKL 395
+EHY + DLL RAG ++EAY+ I M +EP + + L +C ++ L +K+ K+
Sbjct: 480 LEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNL-ELAEKVAEKI 538
Query: 396 ---ESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+SE YVL N++++ WK+ + LRL M++KGL+K P CSW+E++N
Sbjct: 539 FTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKN 590
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 162/339 (47%), Gaps = 37/339 (10%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGV 119
+PP+ AW ++IR + ++L F ++ SG PD+ +P LK+C + L G
Sbjct: 67 SPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGES 126
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIG---FARQVFDEMAVRT------------- 163
H ++ G+ D YT N L+ YA +G VFDEM RT
Sbjct: 127 VHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 164 --------------------VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLV 203
VV+++++IA Y S +AL + +EM + KP+S TL
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 204 SLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
S+L S+ V+V G+ IH Y+ R +D V +G++L +MYAK ++ + VF+ + +
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCR 306
Query: 264 NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF 323
+ S+ +++ +G + + LF QM +KP ++FS ++ AC+H+ + GK
Sbjct: 307 DGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLH 366
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
++R ++ +VD+ ++ G I+ A I M
Sbjct: 367 GYVLRG-GFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 124/294 (42%), Gaps = 38/294 (12%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
+K R+ S S H+ ++T S + + ++ Y + + A +F + V
Sbjct: 12 IKNPTRIKSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPV 70
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+ W S+I + + S+AL F EMR + P+ S+L +C+ M+++ GES+H +
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 225 ITRNHVDMSVELGTALFEMYAK-CGLMKKALL---------------------------- 255
I R +D + G AL MYAK G+ K +
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 256 -------VFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
VF MP K++ S+ +I+ G +D + + +M LKPD + S +L
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 309 ACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
S V +GK ++R I V +VD+ A++ I+++ + +
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 244/451 (54%), Gaps = 18/451 (3%)
Query: 4 LNLIKRXXXXXXXXXXXXXXXXXXXDHNPYLISQFLLSASTISLPFAKSFFNSLPITPPL 63
LNLI + H+ Y +S+ L +ST+ L +A S +P P +
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIP-NPSV 71
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQ-----RSG-LSPDNFTYPFALKACARVSSLS-H 116
F +NT+I ++ ++ ++ + F RS + P+ FTYP KA + H
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRH 131
Query: 117 GGVFHSLTLK--TGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAY 174
G H+ LK ++ D + L+ FYA+CG + AR +F+ + + TW++++AAY
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 175 VGS---NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVD 231
S +S E L +F M++ +PN ++LV+L+ +C+ + G H Y+ +N++
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 232 MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM 291
++ +GT+L ++Y+KCG + A VF+ M ++++ + MI L HG ++ I L+ +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
GL PD +F V +SACSH GLVDEG F+ M +Y I+P VEHYGC+VDLL R+G
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 352 IQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLTANV 409
++EA + IK MP++PNA + RSFLG+ + G + K + LE E NYVL +N+
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNI 428
Query: 410 FSTCASWKDASNLRLAMKQKGLKKNPGCSWL 440
++ W D R MK + K+PG S L
Sbjct: 429 YAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 205/361 (56%), Gaps = 8/361 (2%)
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
++R G S D + A+++C G FH L LK G SD Y ++L+ Y D G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+ A +VF+EM R VV+W++MI+ + L ++ +MR + PN T +LLSA
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
C+ + G S+H + + + +L MY KCG +K A +F+ K++ S+
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 269 TIMISALGNHGCQKDVISLFT-QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
MI+ HG I LF M G KPD +++ +LS+C H GLV EG+ +F+ M
Sbjct: 291 NSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA 350
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV--- 384
+ +KP + HY C+VDLL R GL+QEA ++I+NMPM+PN+VI S L +CR G V
Sbjct: 351 E-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTG 409
Query: 385 -PSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+ +++LM LE + A +V AN++++ WK+A+ +R MK KGLK NPGCSW+E+
Sbjct: 410 IRAAEERLM--LEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 444 N 444
N
Sbjct: 468 N 468
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 2/215 (0%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F +P + +W +I A L + ++++S P+++T+ L AC
Sbjct: 174 AYKVFEEMP-ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+L G H TL GL S + N+L+ Y CG + A ++FD+ + + VV+W+S
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 170 MIAAYVGSNSPSEALHVFQEMR-LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
MIA Y +A+ +F+ M + KP+++T + +LS+C V G + + +
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
+ + + L ++ + GL+++AL + +MP K
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK 387
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 262 bits (669), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 202/331 (61%), Gaps = 3/331 (0%)
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVG 176
G HS+ +++G S Y N+LL YA+CG + A +VFD+M + +V W+S+I +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ P EAL ++ EM KP+ T+VSLLSAC+K+ ++ G+ +H Y+ + + ++
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM-G 295
L ++YA+CG +++A +F+ M +KN S+T +I L +G K+ I LF ME G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
L P ++F IL ACSH G+V EG YF RM Y I+P +EH+GCMVDLLARAG +++A
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 356 YDIIKNMPMEPNAVILRSFLGACRNQG--SVPSLDDKLMSKLESELGANYVLTANVFSTC 413
Y+ IK+MPM+PN VI R+ LGAC G + + +LE +YVL +N++++
Sbjct: 247 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 306
Query: 414 ASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
W D +R M + G+KK PG S +EV N
Sbjct: 307 QRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 337
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 40 LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNF 99
L A+ + A F+ +P L AWN++I A + P E+L + + G+ PD F
Sbjct: 32 LYANCGDVASAYKVFDKMP-EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGF 90
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
T L ACA++ +L+ G H +K GL+ + ++ N LL YA CG + A+ +FDEM
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAG 218
+ V+W+S+I + EA+ +F+ M P +T V +L ACS V G
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 219 -ESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP-EKNLQSFTIMISALG 276
E ++ +E + ++ A+ G +KKA SMP + N+ + ++ A
Sbjct: 211 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
HG ++ F +++ + L+P+ V+LS
Sbjct: 271 VHG--DSDLAEFARIQILQLEPNHSGDYVLLS 300
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 93/164 (56%), Gaps = 2/164 (1%)
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
M +V GE+IHS + R+ + + +L +YA CG + A VF+ MPEK+L ++ +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN 331
I+ +G ++ ++L+T+M G+KPDG + +LSAC+ +G + GK M+++
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-G 119
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
+ ++ ++DL AR G ++EA + M ++ N+V S +
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 261 bits (668), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 235/436 (53%), Gaps = 38/436 (8%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY 101
AS + A+ F+ P+ L +WN +I +++ ++ ++ G+ PD+ T
Sbjct: 202 ASCGDMENARKVFDESPVRD-LVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 102 PFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV 161
+ +C+ + L+ G F+ + GL N L+ ++ CG I AR++FD +
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 162 RTVVTWSSMIAAY-------------------------------VGSNSPSEALHVFQEM 190
RT+V+W++MI+ Y V + +AL +FQEM
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 191 RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLM 250
+ +N KP+ +T++ LSACS++ + G IH YI + + ++V LGT+L +MYAKCG +
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNI 440
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
+AL VF+ + +N ++T +I L HG IS F +M D G+ PD ++F +LSAC
Sbjct: 441 SEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVI 370
H G++ G+ YF +M +N+ P ++HY MVDLL RAGL++EA ++++MPME +A +
Sbjct: 501 CHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAV 560
Query: 371 LRSFLGACRNQGSVPSLDDKLMSKL----ESELGANYVLTANVFSTCASWKDASNLRLAM 426
+ L CR G+V L +K KL S+ G YVL ++ W+DA R M
Sbjct: 561 WGALLFGCRMHGNV-ELGEKAAKKLLELDPSDSGI-YVLLDGMYGEANMWEDAKRARRMM 618
Query: 427 KQKGLKKNPGCSWLEV 442
++G++K PGCS +EV
Sbjct: 619 NERGVEKIPGCSSIEV 634
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 195/390 (50%), Gaps = 40/390 (10%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGL---SPDNFTYPFALKACA--RVSSL 114
P +F+WN IR + S P ES + ++++ R G PD+FTYP K CA R+SSL
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 115 SHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAY 174
H + H L L+ L S + N + +A CG + AR+VFDE VR +V+W+ +I Y
Sbjct: 175 GHMILGHVLKLRLELVS--HVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+A++V++ M KP+ VT++ L+S+CS + +++ G+ + Y+ N + M++
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC------------QK 282
L AL +M++KCG + +A +F+++ ++ + S+T MIS G +K
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 283 DVI-------------------SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF 323
DV+ +LF +M+ KPD ++ LSACS +G +D G ++
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG-IWI 411
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS 383
R + Y++ +V +VD+ A+ G I EA + + N++ + +G G
Sbjct: 412 HRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
Query: 384 VPSLDDKLMSKLESELGANYVLTANVFSTC 413
+ +++ + + + + S C
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 213/397 (53%), Gaps = 14/397 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + W+ I A E+L R++ SG+ P+ T L CA V +L HG
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 119 VFHSLTLK-------TGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA--VRTVVTWSS 169
H +K G + N L+ YA C + AR +FD ++ R VVTW+
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 170 MIAAYVGSNSPSEALHVFQEM--RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
MI Y ++AL + EM +PN+ T+ L AC+ + + G+ IH+Y R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 228 NHVD-MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
N + + + + L +MYAKCG + A LVF++M KN ++T +++ G HG ++ +
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
+F +M +G K DG++ V+L ACSH G++D+G YF+RM ++ + P EHY C+VDLL
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYV 404
RAG + A +I+ MPMEP V+ +FL CR G V + +++L S +Y
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYT 685
Query: 405 LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
L +N+++ WKD + +R M+ KG+KK PGCSW+E
Sbjct: 686 LLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 164/287 (57%), Gaps = 9/287 (3%)
Query: 33 YLISQFLLSASTISLPFAKSFFNSLPITPP-LFAWNTIIRALANSPTPLESLVFFRRLQR 91
+LIS ++ S L A S P + ++ WN++IR+ ++ + L F +
Sbjct: 64 HLISTYI---SVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 92 SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
+PDN+T+PF KAC +SS+ G H+L+L TG S+ + N L+ Y+ C ++
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE---KPNSVTLVSLLSA 208
AR+VFDEM+V VV+W+S+I +Y P AL +F R+ NE +P+++TLV++L
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS--RMTNEFGCRPDNITLVNVLPP 238
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
C+ + S G+ +H + + + ++ +G L +MYAKCG+M +A VF++M K++ S+
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
M++ G +D + LF +M++ +K D +++S +S + GL
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 174/379 (45%), Gaps = 53/379 (13%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS-GLSPDNFTYPFA 104
SL A+ F+ + + + +WN+II + A P +L F R+ G PDN T
Sbjct: 177 SLSDARKVFDEMSVWD-VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L CA + + S G H + + + + + N L+ YA CG + A VF M+V+ V
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDV 295
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMR----------------------LANE------- 195
V+W++M+A Y +A+ +F++M+ L E
Sbjct: 296 VSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 196 ------KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE-------LGTALFE 242
KPN VTL+S+LS C+ + + G+ IH Y + +D+ + L +
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 243 MYAKCGLMKKALLVFNSM--PEKNLQSFTIMISALGNHGCQKDVISLFTQM--EDMGLKP 298
MYAKC + A +F+S+ E+++ ++T+MI HG + L ++M ED +P
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRP 475
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY--GCMVDLLARAGLIQEAY 356
+ + S L AC+ + + GK +R N + +V + C++D+ A+ G I +A
Sbjct: 476 NAFTISCALVACASLAALRIGKQIHAYALR--NQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 357 DIIKNMPMEPNAVILRSFL 375
+ NM M N V S +
Sbjct: 534 LVFDNM-MAKNEVTWTSLM 551
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 102/203 (50%), Gaps = 2/203 (0%)
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
V W+S+I +Y + ++ L++F M + P++ T + AC ++ +V GES H+
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
+V +G AL MY++C + A VF+ M ++ S+ +I + G K
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 284 VISLFTQM-EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCM 342
+ +F++M + G +PD ++ +L C+ +G GK V I+ ++ C+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCL 270
Query: 343 VDLLARAGLIQEAYDIIKNMPME 365
VD+ A+ G++ EA + NM ++
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVK 293
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 210/396 (53%), Gaps = 3/396 (0%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P + W + S E++ F+++ G+ PD++ L AC
Sbjct: 165 AHKLFDEIP-DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV 223
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
V L G + + + + TL+ YA CG + AR VFD M + +VTWS+
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWST 283
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI Y ++ P E + +F +M N KP+ ++V LS+C+ + + GE S I R+
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
++ + AL +MYAKCG M + VF M EK++ IS L +G K ++F
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
Q E +G+ PDG +F +L C H GL+ +G +F+ + +Y +K +VEHYGCMVDL RA
Sbjct: 404 QTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRA 463
Query: 350 GLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTA 407
G++ +AY +I +MPM PNA++ + L CR + K + LE NYV +
Sbjct: 464 GMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLS 523
Query: 408 NVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
N++S W +A+ +R M +KG+KK PG SW+E++
Sbjct: 524 NIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELE 559
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 175/327 (53%), Gaps = 8/327 (2%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +F +N++I N+ E+L F +++ GL FT+P LKAC R SS G
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
HSL +K G + D +LL Y+ G + A ++FDE+ R+VVTW+++ + Y S
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EA+ +F++M KP+S +V +LSAC + ++ +GE I Y+ + + + T L
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+YAKCG M+KA VF+SM EK++ +++ MI ++ K+ I LF QM LKPD
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 313
Query: 301 LSFSVILSACSHMGLVDEGKM---YFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYD 357
S LS+C+ +G +D G+ DR + N+ + ++D+ A+ G + ++
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA----NALIDMYAKCGAMARGFE 369
Query: 358 IIKNMPMEPNAVILRSFLGACRNQGSV 384
+ K M E + VI+ + + G V
Sbjct: 370 VFKEMK-EKDIVIMNAAISGLAKNGHV 395
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 136/303 (44%), Gaps = 2/303 (0%)
Query: 113 SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
+++H H + L D + N LLK ++ +F + ++S+I
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+V ++ E L +F +R + T +L AC++ + G +HS + + +
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
V T+L +Y+ G + A +F+ +P++++ ++T + S G ++ I LF +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
+MG+KPD +LSAC H+G +D G+ M M K S +V+L A+ G +
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR-TTLVNLYAKCGKM 263
Query: 353 QEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFST 412
++A + +M +E + V + + + + + L+ L + S+
Sbjct: 264 EKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSS 322
Query: 413 CAS 415
CAS
Sbjct: 323 CAS 325
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 234/420 (55%), Gaps = 5/420 (1%)
Query: 30 HNPYLISQFL-LSASTISLPFAKSFFNSLPITPPLF--AWNTIIRALANSPTPLESLVFF 86
HNP L+S+ + L + L A+ F+ + + L W + + + +P ++L+ +
Sbjct: 165 HNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVY 224
Query: 87 RRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADC 146
+ S + P NF+ ALKAC + L G H+ +K D N LLK Y +
Sbjct: 225 VDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMES 284
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G AR+VFD M+ R VVTW+S+I+ E ++F++M+ + TL ++L
Sbjct: 285 GLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTIL 344
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
ACS++ + G+ IH+ I ++ V L +L +MY KCG ++ + VF+ M K+L
Sbjct: 345 PACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLA 404
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
S+ IM++ +G ++VI+LF M + G+ PDG++F +LS CS GL + G F+RM
Sbjct: 405 SWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM 464
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG--SV 384
+ + P++EHY C+VD+L RAG I+EA +I+ MP +P+A I S L +CR G SV
Sbjct: 465 KTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSV 524
Query: 385 PSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ K + LE NYV+ +N+++ W + +R MKQ+G+KK GCSW++V++
Sbjct: 525 GEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKD 584
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 244/451 (54%), Gaps = 41/451 (9%)
Query: 29 DHNPYLISQFLLSASTI-SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFR 87
D + +++ + + ST+ S+ +A F+ + P ++ + +I +S + + +
Sbjct: 58 DQDAFVVFELIRVCSTLDSVDYAYDVFSYVS-NPNVYLYTAMIDGFVSSGRSADGVSLYH 116
Query: 88 RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSS---------------- 131
R+ + + PDN+ LKAC L H+ LK G S
Sbjct: 117 RMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSG 172
Query: 132 ---------------DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVG 176
D ++ Y++CG I A ++F ++ ++ V W++MI V
Sbjct: 173 ELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVR 232
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ ++AL +F+EM++ N N T V +LSACS + + G +HS++ +++S +
Sbjct: 233 NKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFV 292
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
G AL MY++CG + +A VF M +K++ S+ MIS L HG + I+ F M + G
Sbjct: 293 GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGF 352
Query: 297 KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAY 356
+P+ ++ +L+ACSH GL+D G F+ M R++N++P +EHYGC+VDLL R G ++EAY
Sbjct: 353 RPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAY 412
Query: 357 DIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKL---ESELGANYVLTANVFSTC 413
I+N+P+EP+ ++L + L AC+ G++ L +K+ +L E+ YVL +N++++
Sbjct: 413 RFIENIPIEPDHIMLGTLLSACKIHGNM-ELGEKIAKRLFESENPDSGTYVLLSNLYASS 471
Query: 414 ASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
WK+++ +R +M+ G++K PGCS +EV N
Sbjct: 472 GKWKESTEIRESMRDSGIEKEPGCSTIEVDN 502
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 258 bits (659), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 239/416 (57%), Gaps = 8/416 (1%)
Query: 34 LISQFLLSASTI-SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS 92
L++Q L + I + +A+ F+ + P +F WNT+ + + P ESL+ +++++
Sbjct: 45 LLTQLLENLVVIGDMCYARQVFDEMH-KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL 103
Query: 93 GLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFA 152
G+ PD FTYPF +KA +++ S G H+ +K G L+ Y G + A
Sbjct: 104 GVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSA 163
Query: 153 RQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKM 212
+F+ M V+ +V W++ +A V + + + AL F +M + +S T+VS+LSAC ++
Sbjct: 164 EFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQL 223
Query: 213 VNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMI 272
++ GE I+ + +D ++ + A +M+ KCG + A ++F M ++N+ S++ MI
Sbjct: 224 GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMI 283
Query: 273 SALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM--Y 330
+G ++ ++LFT M++ GL+P+ ++F +LSACSH GLV+EGK YF MV+
Sbjct: 284 VGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDK 343
Query: 331 NIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC---RNQGSVPSL 387
N++P EHY CMVDLL R+GL++EAY+ IK MP+EP+ I + LGAC R+ +
Sbjct: 344 NLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKV 403
Query: 388 DDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
D L+ + ++G+ +VL +N+++ W +R M++ G KK S +E +
Sbjct: 404 ADVLV-ETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFE 458
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 4/295 (1%)
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H++ L+TG S LL+ G + +ARQVFDEM + W+++ YV + P
Sbjct: 31 HAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLP 90
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
E+L ++++MR +P+ T ++ A S++ + S G ++H+++ + + T L
Sbjct: 91 FESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATEL 150
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
MY K G + A +F SM K+L ++ ++ G + F +M ++ D
Sbjct: 151 VMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
+ +LSAC +G ++ G+ +DR R I ++ +D+ + G + A + +
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDR-ARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 361 NMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE-LGANYVLTANVFSTCA 414
M +G N S +L L + +++E L NYV V S C+
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREAL--TLFTTMQNEGLRPNYVTFLGVLSACS 322
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 258 bits (658), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 218/393 (55%), Gaps = 9/393 (2%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F +P+ + +W II + E+L F ++ + P+ TY L + RV
Sbjct: 164 FGEMPVRD-VVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGC 219
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
LS G H L LK T N L+ Y C + A +VF E+ + V+W+SMI+
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 174 YVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
V EA+ +F M+ ++ KP+ L S+LSAC+ + V G +H YI +
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
+GTA+ +MYAKCG ++ AL +FN + KN+ ++ ++ L HG + + F +M
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM-VRMYNIKPSVEHYGCMVDLLARAGL 351
+G KP+ ++F L+AC H GLVDEG+ YF +M R YN+ P +EHYGCM+DLL RAGL
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 352 IQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMS---KLESELGANYVLTAN 408
+ EA +++K MP++P+ I + L AC+N+G++ L +++ +E E YVL +N
Sbjct: 460 LDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSN 519
Query: 409 VFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
+F+ W D + +R MK KG+ K PG S++E
Sbjct: 520 IFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 174 bits (442), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 166/324 (51%), Gaps = 14/324 (4%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
F++NT++ + A P ++ ++ +G SPD FT+P KAC + S + G H +
Sbjct: 72 FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGI 131
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
K G D Y N+L+ FY CG A +VF EM VR VV+W+ +I + + EA
Sbjct: 132 VTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEA 191
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
L F +M + +PN T V +L + ++ +S G+ IH I + +S+E G AL +M
Sbjct: 192 LDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDM 248
Query: 244 YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DMGLKPDGLS 302
Y KC + A+ VF + +K+ S+ MIS L + K+ I LF+ M+ G+KPDG
Sbjct: 249 YVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHI 308
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVE---HYG-CMVDLLARAGLIQEAYDI 358
+ +LSAC+ +G VD G R V Y + ++ H G +VD+ A+ G I+ A +I
Sbjct: 309 LTSVLSACASLGAVDHG-----RWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 359 IKNMPMEPNAVILRSFLGACRNQG 382
N N + LG G
Sbjct: 364 F-NGIRSKNVFTWNALLGGLAIHG 386
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 121/262 (46%), Gaps = 13/262 (4%)
Query: 160 AVRTVVT---WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVS 216
++R+V++ +++++++Y + P + ++ P+ T + AC K +
Sbjct: 64 SIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR 123
Query: 217 AGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
G+ IH +T+ + + +L Y CG + A VF MP +++ S+T +I+
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
G K+ + F++M+ ++P+ ++ +L + +G + GK +++ ++ S+
Sbjct: 184 RTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASL-ISL 239
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLE 396
E ++D+ + + +A + + + G + S ++D L S ++
Sbjct: 240 ETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAID--LFSLMQ 297
Query: 397 SELGA---NYVLTANVFSTCAS 415
+ G ++LT+ V S CAS
Sbjct: 298 TSSGIKPDGHILTS-VLSACAS 318
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 215/400 (53%), Gaps = 7/400 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ + +P + +W +I + + E+L F + RS P+ FT+ L
Sbjct: 103 LEDARKVLDEMP-EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLT 161
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
+C R S L G H L +K S + ++LL YA G I AR++F+ + R VV+
Sbjct: 162 SCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVS 221
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
+++IA Y EAL +F + PN VT SLL+A S + + G+ H ++
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
R + L +L +MY+KCG + A +F++MPE+ S+ M+ HG ++V+
Sbjct: 282 RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLE 341
Query: 287 LFTQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR-MYNIKPSVEHYGCMVD 344
LF M D +KPD ++ +LS CSH + D G FD MV Y KP EHYGC+VD
Sbjct: 342 LFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVD 401
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV---PSLDDKLMSKLESELGA 401
+L RAG I EA++ IK MP +P A +L S LGACR SV S+ +L+ ++E E
Sbjct: 402 MLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLI-EIEPENAG 460
Query: 402 NYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
NYV+ +N++++ W D +N+R M QK + K PG SW++
Sbjct: 461 NYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 161/314 (51%), Gaps = 24/314 (7%)
Query: 69 IIRALANSPT--------PLESLVFFRRLQRS-----GLSPDN--FTYPFALKACARVSS 113
I R+ ++SPT P+ L RLQ + L P+ Y L AC +
Sbjct: 8 IHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRA 67
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
L G H+ +KT Y LL FY C + AR+V DEM + VV+W++MI+
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
Y + SEAL VF EM ++ KPN T ++L++C + + G+ IH I + + D
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
+ +G++L +MYAK G +K+A +F +PE+++ S T +I+ G ++ + +F ++
Sbjct: 188 IFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS 247
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR----MYNIKPSVEHYGCMVDLLARA 349
G+ P+ ++++ +L+A S + L+D GK ++R Y + + ++D+ ++
Sbjct: 248 EGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN-----SLIDMYSKC 302
Query: 350 GLIQEAYDIIKNMP 363
G + A + NMP
Sbjct: 303 GNLSYARRLFDNMP 316
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 227/400 (56%), Gaps = 7/400 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P+ + +WN +I A + E+L F+ + ++ + PD T + ACA
Sbjct: 219 AQKLFDEIPVKD-VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ S+ G H G S+ N L+ Y+ CG + A +F+ + + V++W++
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR-- 227
+I Y N EAL +FQEM + E PN VT++S+L AC+ + + G IH YI +
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
V + L T+L +MYAKCG ++ A VFNS+ K+L S+ MI HG L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
F++M +G++PD ++F +LSACSH G++D G+ F M + Y + P +EHYGCM+DLL
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 348 RAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV---PSLDDKLMSKLESELGANYV 404
+GL +EA ++I M MEP+ VI S L AC+ G+V S + L+ K+E E +YV
Sbjct: 518 HSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLI-KIEPENPGSYV 576
Query: 405 LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
L +N++++ W + + R + KG+KK PGCS +E+ +
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 187/363 (51%), Gaps = 37/363 (10%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG 93
LI +LS LP+A S F ++ P L WNT+ R A S P+ +L + + G
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQ-EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG 129
Query: 94 LSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL------------- 140
L P+++T+PF LK+CA+ + G H LK G D Y +L+
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189
Query: 141 ------------------KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
K YA G I A+++FDE+ V+ VV+W++MI+ Y + + E
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE 249
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
AL +F++M N +P+ T+V+++SAC++ ++ G +H +I + ++++ AL +
Sbjct: 250 ALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALID 309
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
+Y+KCG ++ A +F +P K++ S+ +I + K+ + LF +M G P+ ++
Sbjct: 310 LYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Query: 303 FSVILSACSHMGLVDEGK---MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII 359
IL AC+H+G +D G+ +Y D+ R+ + + ++D+ A+ G I+ A+ +
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDK--RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 427
Query: 360 KNM 362
++
Sbjct: 428 NSI 430
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/409 (34%), Positives = 226/409 (55%), Gaps = 13/409 (3%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLES-LVFFRRLQRSGLSPDNFT 100
A + + +A+ F+ L W+ +I + E+ VFF+ L ++
Sbjct: 251 AKSKCIIYARRVFD-LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVA---MV 306
Query: 101 YPFA----LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF 156
P A L CAR LS G H +K G D NT++ FYA G++ A + F
Sbjct: 307 TPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQF 366
Query: 157 DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVS 216
E+ ++ V++++S+I V + P E+ +F EMR + +P+ TL+ +L+ACS + +
Sbjct: 367 SEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALG 426
Query: 217 AGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
G S H Y + ++ + AL +MY KCG + A VF++M ++++ S+ M+ G
Sbjct: 427 HGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFG 486
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPS 335
HG K+ +SLF M++ G+ PD ++ ILSACSH GLVDEGK F+ M R +N+ P
Sbjct: 487 IHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPR 546
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKL 395
++HY CM DLLARAG + EAYD + MP EP+ +L + L AC + L +++ K+
Sbjct: 547 IDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKN-AELGNEVSKKM 605
Query: 396 ES--ELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+S E + VL +N +S W+DA+ +R+ K++GL K PG SW++V
Sbjct: 606 QSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 161/325 (49%), Gaps = 18/325 (5%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLP---ITPPLFAWNTIIRALANSPTPLESLVFFRRLQ 90
L++ L AS + A+ F+ +P I P AW+ +IRA A++ ++L + ++
Sbjct: 38 LVNLTRLYASCNEVELARHVFDEIPHPRINP--IAWDLMIRAYASNDFAEKALDLYYKML 95
Query: 91 RSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIG 150
SG+ P +TYPF LKACA + ++ G + HS + ++D Y L+ FYA CG +
Sbjct: 96 NSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELE 155
Query: 151 FARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSAC 209
A +VFDEM R +V W++MI+ + ++ + +F +M R+ PN T+V + A
Sbjct: 156 MAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPAL 215
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFT 269
+ + G+++H Y TR + + T + ++YAK + A VF+ +KN +++
Sbjct: 216 GRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWS 275
Query: 270 IMISALGNHGCQKDVISLFTQM--EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
MI + K+ +F QM D ++ +IL C+ G + G R V
Sbjct: 276 AMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGG-----RCV 330
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLI 352
Y +K G ++DL + +I
Sbjct: 331 HCYAVKA-----GFILDLTVQNTII 350
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 161/376 (42%), Gaps = 39/376 (10%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR-SGLSPDNFTYPFA 104
L A F+ +P + AWN +I + + + F ++R GLSP+ T
Sbjct: 153 ELEMAIKVFDEMP-KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGM 211
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
A R +L G H + G S+D +L YA I +AR+VFD +
Sbjct: 212 FPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNE 271
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL---LSACSKMVNVSAGESI 221
VTWS+MI YV + EA VF +M L N+ VT V++ L C++ ++S G +
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQM-LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
H Y + + + + + YAK G + A F+ + K++ S+ +I+ +
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 282 KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG---------------------- 319
++ LF +M G++PD + +L+ACSH+ + G
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNAL 450
Query: 320 -KMY-----FDRMVRMYNI--KPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNA 368
MY D R+++ K + + M+ GL +EA + +M + P+
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 369 VILRSFLGACRNQGSV 384
V L + L AC + G V
Sbjct: 511 VTLLAILSACSHSGLV 526
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE-LGTALFEMYAKCGLMKKALLVFNSM 260
+SLL C + N+ G+ IH ++ + + +S + L +YA C ++ A VF+ +
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 261 PEKNLQ--SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDE 318
P + ++ +MI A ++ + + L+ +M + G++P ++ +L AC+ + +D+
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 319 GKMYFDRMVRMYNIKP-SVEHYGC--MVDLLARAGLIQEAYDIIKNMP 363
GK+ + N + + Y C +VD A+ G ++ A + MP
Sbjct: 122 GKLIHSHV----NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 226/400 (56%), Gaps = 3/400 (0%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ A+ F+ + + L +WNT+I + E+L F ++ G FT L
Sbjct: 112 VELARQVFDGM-LERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLS 170
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
AC H L++KT + + Y LL YA CG I A QVF+ M ++ VT
Sbjct: 171 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 230
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
WSSM+A YV + + EAL +++ + + + N TL S++ ACS + + G+ +H+ I
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
++ +V + ++ +MYAKCG ++++ ++F+ + EKNL+ + +IS H K+V+
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 350
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF +M+ G+ P+ ++FS +LS C H GLV+EG+ +F M Y + P+V HY CMVD+L
Sbjct: 351 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYV 404
RAGL+ EAY++IK++P +P A I S L +CR + + + + +LE E N+V
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHV 470
Query: 405 LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
L +N+++ W++ + R ++ +KK G SW+++++
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKD 510
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 146/273 (53%), Gaps = 9/273 (3%)
Query: 94 LSPDNFTYPFA--------LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
+SP ++ F+ L+ CAR ++ H ++ L D N L+ Y+
Sbjct: 49 VSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSK 108
Query: 146 CGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
CG + ARQVFD M R++V+W++MI Y + SEAL +F EMR K + T+ S+
Sbjct: 109 CGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSV 168
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
LSAC + + +H + +D+++ +GTAL ++YAKCG++K A+ VF SM +K+
Sbjct: 169 LSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSS 228
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
+++ M++ + ++ + L+ + + M L+ + + S ++ ACS++ + EGK
Sbjct: 229 VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
+ + +V VD+ A+ G ++E+Y I
Sbjct: 289 ICK-SGFGSNVFVASSAVDMYAKCGSLRESYII 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 191 RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLM 250
R +NE N + +L C++ V ++ H I R ++ V L L Y+KCG +
Sbjct: 53 RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFV 112
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
+ A VF+ M E++L S+ MI + + + + +F +M + G K + S +LSAC
Sbjct: 113 ELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVE---HYG-CMVDLLARAGLIQEAYDIIKNM 362
E K + ++K ++ + G ++DL A+ G+I++A + ++M
Sbjct: 173 GVNCDALECK-----KLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESM 223
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 232/414 (56%), Gaps = 11/414 (2%)
Query: 36 SQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS 95
S ++ A + +A+ F+ + + +WN++I + + +++ FR+++ G
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTV-SWNSMISGYSEAGYAKDAMDLFRKMEEEGFE 230
Query: 96 PDNFTYPFALKACARVSSLSHGGVFH--SLTLKTGLSSDCYTDNTLLKFYADCGAIGFAR 153
PD T L AC+ + L G + ++T K GLS+ + + L+ Y CG + AR
Sbjct: 231 PDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST--FLGSKLISMYGKCGDLDSAR 288
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
+VF++M + V W++MI Y + SEA +F EM P++ TL ++LSAC +
Sbjct: 289 RVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG 348
Query: 214 NVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMIS 273
+ G+ I ++ + + ++ + T L +MY KCG +++AL VF +MP KN ++ MI+
Sbjct: 349 ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 274 ALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIK 333
A + G K+ + LF + M + P ++F +LSAC H GLV +G YF M M+ +
Sbjct: 409 AYAHQGHAKEALLLFDR---MSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
Query: 334 PSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDK--- 390
P +EHY ++DLL+RAG++ EA++ ++ P +P+ ++L + LGAC + V +
Sbjct: 466 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRM 525
Query: 391 LMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
LM E++ NYV+++NV + W +++ +R M+ +G+ K PGCSW+E++
Sbjct: 526 LMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEG 579
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 184/336 (54%), Gaps = 11/336 (3%)
Query: 52 SFFNSLPITPPLFAWNTIIRALANSPTPLES-LVFFRRLQRSGLSPDNFTYPFALKACAR 110
SF S+ P +++N +IR L N+ E+ L +RR++ SGL PD FTY F ACA+
Sbjct: 85 SFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAK 144
Query: 111 VSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSM 170
+ + G HS K GL D + +++L+ YA CG +G+AR++FDE+ R V+W+SM
Sbjct: 145 LEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSM 204
Query: 171 IAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
I+ Y + +A+ +F++M +P+ TLVS+L ACS + ++ G + +
Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKI 264
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQ 290
+S LG+ L MY KCG + A VFN M +K+ ++T MI+ +G + LF +
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH----YGCMVDLL 346
ME G+ PD + S +LSAC +G ++ GK + + + S++H +VD+
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGK-----QIETHASELSLQHNIYVATGLVDMY 379
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
+ G ++EA + + MP++ N + + A +QG
Sbjct: 380 GKCGRVEEALRVFEAMPVK-NEATWNAMITAYAHQG 414
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 131/395 (33%), Positives = 214/395 (54%), Gaps = 8/395 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P + +W T+I A + ++L + R + P+ +TY L++C
Sbjct: 115 AHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN 173
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+S + + H +K GL SD + + L+ +A G A VFDEM + W+S
Sbjct: 174 GMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I + ++ AL +F+ M+ A TL S+L AC+ + + G H +I +
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
D + L AL +MY KCG ++ AL VFN M E+++ +++ MIS L +G ++ + LF
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
+M+ G KP+ ++ +L ACSH GL+++G YF M ++Y I P EHYGCM+DLL +A
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 350 GLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS--VPSLDDKLMSKLESELGANYVLTA 407
G + +A ++ M EP+AV R+ LGACR Q + + K + L+ E Y L +
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 408 NVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
N+++ W +R M+ +G+KK PGCSW+EV
Sbjct: 469 NIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 215/367 (58%), Gaps = 5/367 (1%)
Query: 80 LESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTL 139
++SL FR L + +SP+ T L + +L G H +K G + C +
Sbjct: 423 IDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAV 482
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
+ YA CG + A ++F+ ++ R +V+W+SMI S++PS A+ +F++M ++ +
Sbjct: 483 IDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDC 542
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
V++ + LSAC+ + + S G++IH ++ ++ + V + L +MYAKCG +K A+ VF +
Sbjct: 543 VSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT 602
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPDGLSFSVILSACSHMGLVDE 318
M EKN+ S+ +I+A GNHG KD + LF +M E G++PD ++F I+S+C H+G VDE
Sbjct: 603 MKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDE 662
Query: 319 GKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC 378
G +F M Y I+P EHY C+VDL RAG + EAY+ +K+MP P+A + + LGAC
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGAC 722
Query: 379 RNQGSVPSLD---DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNP 435
R +V + KLM L+ YVL +N + W+ + +R MK++ ++K P
Sbjct: 723 RLHKNVELAEVASSKLMD-LDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIP 781
Query: 436 GCSWLEV 442
G SW+E+
Sbjct: 782 GYSWIEI 788
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 156/319 (48%), Gaps = 2/319 (0%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
WN +I S ESL FF + SG+ PD T+ L + ++ +L + H +
Sbjct: 308 WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
+ +S D + + L+ Y C + A+ +F + VV +++MI+ Y+ + ++L
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLE 427
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
+F+ + PN +TLVS+L ++ + G +H +I + D +G A+ +MYA
Sbjct: 428 MFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
KCG M A +F + ++++ S+ MI+ I +F QM G+ D +S S
Sbjct: 488 KCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISA 547
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
LSAC+++ GK M++ +++ V ++D+ A+ G ++ A ++ K M E
Sbjct: 548 ALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-E 605
Query: 366 PNAVILRSFLGACRNQGSV 384
N V S + AC N G +
Sbjct: 606 KNIVSWNSIIAACGNHGKL 624
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 146/301 (48%), Gaps = 9/301 (2%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
WN ++ A + F ++ +SP+ T+ L CA + G H L +
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
+G+ + N+LL Y+ CG A ++F M+ VTW+ MI+ YV S E+L
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
F EM + P+++T SLL + SK N+ + IH YI R+ + + + L +AL + Y
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYF 386
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
KC + A +F+ ++ FT MIS ++G D + +F + + + P+ ++
Sbjct: 387 KCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS 446
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVE---HYGC-MVDLLARAGLIQEAYDIIKN 361
IL +G++ K+ R + + IK + + GC ++D+ A+ G + AY+I +
Sbjct: 447 ILPV---IGILLALKL--GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 362 M 362
+
Sbjct: 502 L 502
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 145/303 (47%), Gaps = 13/303 (4%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
WN+II + + ++L F+ ++ G+SPD T+P +KAC + + G F S T+
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTV 164
Query: 126 KT-GLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
+ G+ + + ++L+K Y + G I ++FD + + V W+ M+ Y + +
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
F MR+ PN+VT +LS C+ + + G +H + + VD + +L MY
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
+KCG A +F M + ++ MIS G ++ ++ F +M G+ PD ++FS
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Query: 305 VILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM 364
+L + S + + + + Y ++ S+ +D+ + LI +AY + + M
Sbjct: 345 SLLPSVSKF-----ENLEYCKQIHCYIMRHSIS-----LDIFLTSALI-DAYFKCRGVSM 393
Query: 365 EPN 367
N
Sbjct: 394 AQN 396
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 2/201 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +WN++I A S P ++ FR++ SG+ D + AL ACA + S S G H
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+K L+SD Y+++TL+ YA CG + A VF M + +V+W+S+IAA +
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 183 ALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTAL 240
+L +F EM + +P+ +T + ++S+C + +V G +T ++ + E +
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686
Query: 241 FEMYAKCGLMKKALLVFNSMP 261
+++ + G + +A SMP
Sbjct: 687 VDLFGRAGRLTEAYETVKSMP 707
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 140/307 (45%), Gaps = 37/307 (12%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-- 162
L+AC+ + L G H+ + +S D YTD +L YA CG+ ++F + +R
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
++ W+S+I+++V + ++AL + +M P+ T L+ AC + N + +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
++ +D + + ++L + Y + G + +F+ + +K+ + +M++ G
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD 221
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG----------------------- 319
VI F+ M + P+ ++F +LS C+ L+D G
Sbjct: 222 SVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 320 KMY-----FDRMVRMYNI--KPSVEHYGCMVDLLARAGLIQEA----YDIIKNMPMEPNA 368
MY FD +++ + + + CM+ ++GL++E+ Y++I + + P+A
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL-PDA 340
Query: 369 VILRSFL 375
+ S L
Sbjct: 341 ITFSSLL 347
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 210/385 (54%), Gaps = 4/385 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L AWN ++ S ++L F + + G D+FT K C + +++ G H+
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+K+G D + + +L Y CG + A+ FD + V V W++MI+ + +
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 601
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
A HVF +MRL P+ T+ +L A S + + G IH+ + + +GT+L +
Sbjct: 602 AFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVD 661
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MYAKCG + A +F + N+ ++ M+ L HG K+ + LF QM+ +G+KPD ++
Sbjct: 662 MYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVT 721
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F +LSACSH GLV E + M Y IKP +EHY C+ D L RAGL+++A ++I++M
Sbjct: 722 FIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Query: 363 PMEPNAVILRSFLGACRNQGSVPS---LDDKLMSKLESELGANYVLTANVFSTCASWKDA 419
ME +A + R+ L ACR QG + + KL+ +LE + YVL +N+++ + W +
Sbjct: 782 SMEASASMYRTLLAACRVQGDTETGKRVATKLL-ELEPLDSSAYVLLSNMYAAASKWDEM 840
Query: 420 SNLRLAMKQKGLKKNPGCSWLEVQN 444
R MK +KK+PG SW+EV+N
Sbjct: 841 KLARTMMKGHKVKKDPGFSWIEVKN 865
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 160/322 (49%), Gaps = 14/322 (4%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC 108
FA++ F+++ L +WN++I +A + +E++ F +L R GL PD +T LKA
Sbjct: 368 FARTVFDNMS-ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA 426
Query: 109 ARV-SSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYA--DC---GAIGFARQVFDEMAVR 162
+ + LS H +K SD + L+ Y+ C I F R FD
Sbjct: 427 SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD----- 481
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
+V W++M+A Y S+ + L +F M E+ + TL ++ C + ++ G+ +H
Sbjct: 482 -LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
+Y ++ D+ + + + + +MY KCG M A F+S+P + ++T MIS +G ++
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCM 342
+F+QM MG+ PD + + + A S + +++G+ +++ N +
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKL-NCTNDPFVGTSL 659
Query: 343 VDLLARAGLIQEAYDIIKNMPM 364
VD+ A+ G I +AY + K + M
Sbjct: 660 VDMYAKCGSIDDAYCLFKRIEM 681
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 14/303 (4%)
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
F + S + D T+ L +V SL+ G H + LK GL N+L+ Y
Sbjct: 303 FADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 146 CGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
GFAR VFD M+ R +++W+S+IA + EA+ +F ++ KP+ T+ S+
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 206 LSACSKM-VNVSAGESIHSY-ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
L A S + +S + +H + I N+V S + TAL + Y++ MK+A ++F
Sbjct: 423 LKAASSLPEGLSLSKQVHVHAIKINNVSDSF-VSTALIDAYSRNRCMKEAEILFER-HNF 480
Query: 264 NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF 323
+L ++ M++ + LF M G + D + + + C + +++GK
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK--- 537
Query: 324 DRMVRMYNIKPSVEH----YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR 379
V Y IK + ++D+ + G + A ++P+ P+ V + + C
Sbjct: 538 --QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCI 594
Query: 380 NQG 382
G
Sbjct: 595 ENG 597
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+S+P+ P AW T+I + + F +++ G+ PD FT KA +
Sbjct: 571 AQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+++L G H+ LK ++D + +L+ YA CG+I A +F + + + W++
Sbjct: 630 CLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA 689
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
M+ E L +F++M+ KP+ VT + +LSACS VS + ++ H
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA---YKHMRSMH 746
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
D ++ PE ++ ++ + ALG G K +L
Sbjct: 747 GDYGIK-------------------------PE--IEHYSCLADALGRAGLVKQAENL-- 777
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
+E M ++ + +L+AC G + GK +++ +
Sbjct: 778 -IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLEL 816
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 5/200 (2%)
Query: 112 SSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMI 171
S L G H+ L + + + N L+ Y+ CG++ +AR+VFD+M R +V+W+S++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 172 AAYVGSN-----SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
AAY S+ + +A +F+ +R + +TL +L C V A ES H Y
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+ +D + AL +Y K G +K+ ++F MP +++ + +M+ A G +++ I
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 287 LFTQMEDMGLKPDGLSFSVI 306
L + GL P+ ++ ++
Sbjct: 233 LSSAFHSSGLNPNEITLRLL 252
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 116/264 (43%), Gaps = 33/264 (12%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
K F +P + WN +++A E++ SGL+P+ T L+ A
Sbjct: 199 GKVLFEEMPYRDVVL-WNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT----LRLLA 253
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
R+S D++ D G + D +V ++ +
Sbjct: 254 RISG----------------------DDS------DAGQVKSFANGNDASSVSEIIFRNK 285
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
++ Y+ S S L F +M ++ + + VT + +L+ K+ +++ G+ +H +
Sbjct: 286 GLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG 345
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+D+ + + +L MY K A VF++M E++L S+ +I+ + +G + + + LF
Sbjct: 346 LDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFM 405
Query: 290 QMEDMGLKPDGLSFSVILSACSHM 313
Q+ GLKPD + + +L A S +
Sbjct: 406 QLLRCGLKPDQYTMTSVLKAASSL 429
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 24/284 (8%)
Query: 29 DHNP--YLISQFL-LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPL----- 80
+ NP +LI+ + + + SL +A+ F+ +P L +WN+I+ A A S +
Sbjct: 69 EENPERFLINNLISMYSKCGSLTYARRVFDKMP-DRDLVSWNSILAAYAQSSECVVENIQ 127
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
++ + FR L++ + T LK C + FH K GL D + L+
Sbjct: 128 QAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALV 187
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
Y G + + +F+EM R VV W+ M+ AY+ EA+ + + PN +
Sbjct: 188 NIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEI 247
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL---GTALFEMYAKCGLMKKALLVF 257
TL LL+ S + S + S+ N E+ L E Y G L F
Sbjct: 248 TL-RLLARISG--DDSDAGQVKSFANGNDASSVSEIIFRNKGLSE-YLHSGQYSALLKCF 303
Query: 258 NSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQMEDMGLK 297
M E +++ +F +M++ + D ++L Q+ M LK
Sbjct: 304 ADMVESDVECDQVTFILMLAT----AVKVDSLALGQQVHCMALK 343
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 228/414 (55%), Gaps = 34/414 (8%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +WN++I +P ++L F++++ + + T L ACA++ +L G S
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSM------------ 170
+ ++ + N +L Y CG+I A+++FD M + VTW++M
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 171 -------------------IAAYVGSNSPSEALHVFQEMRLA-NEKPNSVTLVSLLSACS 210
I+AY + P+EAL VF E++L N K N +TLVS LSAC+
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 211 KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTI 270
++ + G IHSYI ++ + M+ + +AL MY+KCG ++K+ VFNS+ ++++ ++
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 271 MISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMY 330
MI L HGC + + +F +M++ +KP+G++F+ + ACSH GLVDE + F +M Y
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 331 NIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG--SVPSLD 388
I P +HY C+VD+L R+G +++A I+ MP+ P+ + + LGAC+ ++ +
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 389 DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+ +LE +VL +N+++ W++ S LR M+ GLKK PGCS +E+
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEI 610
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 215/420 (51%), Gaps = 39/420 (9%)
Query: 31 NPYLISQFLLSA---STISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESL-VFF 86
+PY S+ A S SL +A+ F+ +P P FAWNT+IRA A+ P P+ S+ F
Sbjct: 61 DPYSASKLFAMAALSSFASLEYARKVFDEIP-KPNSFAWNTLIRAYASGPDPVLSIWAFL 119
Query: 87 RRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADC 146
+ S P+ +T+PF +KA A VSSLS G H + +K+ + SD + N+L+ Y C
Sbjct: 120 DMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSC 179
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G + A +VF + + VV+W+SMI +V SP +AL +F++M + K + VT+V +L
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVF--------- 257
SAC+K+ N+ G + SYI N V++++ L A+ +MY KCG ++ A +F
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 258 ----------------------NSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DM 294
NSMP+K++ ++ +ISA +G + + +F +++
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
+K + ++ LSAC+ +G ++ G+ + ++ + I+ + ++ + ++ G +++
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGR-WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 355 AYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCA 414
+ ++ N + + + + +G G D E+ + N V NVF C+
Sbjct: 419 SREVF-NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACS 477
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 245/462 (53%), Gaps = 54/462 (11%)
Query: 29 DHNPYLISQFLLSASTISLP---FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVF 85
D + Y++++ + + + + +P +A+ + P F W +IR A E++
Sbjct: 78 DQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNP-FLWTAVIRGYAIEGKFDEAIAM 136
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
+ +++ ++P +FT+ LKAC + L+ G FH+ T + Y NT++ Y
Sbjct: 137 YGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVK 196
Query: 146 CGAIGFARQVFDEMAVRTVVTWSSMIAAY--VGS-------------------------- 177
C +I AR+VFDEM R V++W+ +IAAY VG+
Sbjct: 197 CESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGF 256
Query: 178 ---NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKM-VNVSAGESIH-----SYITRN 228
P EAL F M + + + VT+ +SAC+++ + A ++ Y +
Sbjct: 257 AQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSD 316
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
HV +G+AL +MY+KCG +++A+ VF SM KN+ +++ MI L HG ++ + LF
Sbjct: 317 HV----VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLF 372
Query: 289 ----TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
TQ E +KP+ ++F L ACSH GLVD+G+ FD M + + ++P+ +HY CMVD
Sbjct: 373 HYMVTQTE---IKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVD 429
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGAN 402
LL R G +QEA ++IK M +EP+ + + LGACR N + + + + +LE ++ N
Sbjct: 430 LLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGN 489
Query: 403 YVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
Y+L +NV+++ W +R +K+KGLKK P SW+ +N
Sbjct: 490 YILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGA--IGFARQVFDEMAVRTVVTWSSMIAAYVGS 177
H L+ GL CY L++ G +AR+V + + R W+++I Y
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIE 127
Query: 178 NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
EA+ ++ MR P S T +LL AC M +++ G H+ R V +G
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVG 187
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA---LGNHGC---------QKDVI 285
+ +MY KC + A VF+ MPE+++ S+T +I+A +GN C KD++
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 286 S-------------------LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
+ F +ME G++ D ++ + +SAC+ +G Y DR
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG----ASKYADRA 303
Query: 327 VRM-----YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
V++ Y+ V ++D+ ++ G ++EA ++ +M
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 251 bits (642), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 209/382 (54%), Gaps = 4/382 (1%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
W+ ++ + + LE++ F R+ +G+ P +T L AC+ + L G HS L
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
K G + L+ YA G + AR+ FD + R V W+S+I+ YV ++ EAL
Sbjct: 350 KLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALI 409
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
+++ M+ A PN T+ S+L ACS + + G+ +H + ++ + V +G+AL MY+
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
KCG ++ LVF P K++ S+ MIS L ++G + + LF +M G++PD ++F
Sbjct: 470 KCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVN 529
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
I+SACSH G V+ G YF+ M + P V+HY CMVDLL+RAG ++EA + I++ ++
Sbjct: 530 IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANID 589
Query: 366 PNAVILRSFLGACRNQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNL 422
+ R L AC+N G +KLM+ L S + YV + +++ +D +
Sbjct: 590 HGLCLWRILLSACKNHGKCELGVYAGEKLMA-LGSRESSTYVQLSGIYTALGRMRDVERV 648
Query: 423 RLAMKQKGLKKNPGCSWLEVQN 444
M+ G+ K GCSW+E++N
Sbjct: 649 WKHMRANGVSKEVGCSWIELKN 670
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 167/358 (46%), Gaps = 37/358 (10%)
Query: 64 FAWNTIIRALANSPTPLESL-VF--FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
+ W+T++ A E++ VF F R + G S ++ + L + A + G
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H +T+K GL N L+ Y+ C ++ A ++FD R +TWS+M+ Y +
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EA+ +F M A KP+ T+V +L+ACS + + G+ +HS++ + + + TAL
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+MYAK G + A F+ + E+++ +T +IS + ++ + L+ +M+ G+ P+
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVR---------------MYNIKPSVEH------- 338
+ + +L ACS + ++ GK ++ MY+ S+E
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 339 --------YGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSFLGACRNQGSVP 385
+ M+ L+ G EA ++ + M MEP+ V + + AC ++G V
Sbjct: 484 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 154/314 (49%), Gaps = 7/314 (2%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANS---PTPLESLVFFRRLQRSGLSPDNFTYPF 103
L A S FN++ I + +WN++I + + + + FR ++ + P+ +T
Sbjct: 65 LAKAHSIFNAI-ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAG 123
Query: 104 ALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT 163
KA + + S + G H+L +K D Y D +L+ Y G + +VF M R
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQE-MRLANEKPNS-VTLVSLLSACSKMVNVSAGESI 221
TWS+M++ Y EA+ VF +R E +S ++LS+ + + V G I
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
H +N + V L AL MY+KC + +A +F+S ++N +++ M++ +G
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 282 KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC 341
+ + LF++M G+KP + +L+ACS + ++EGK ++++ + +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL-GFERHLFATTA 362
Query: 342 MVDLLARAGLIQEA 355
+VD+ A+AG + +A
Sbjct: 363 LVDMYAKAGCLADA 376
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 7/225 (3%)
Query: 91 RSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIG 150
++ L+P T L ++ +L G H ++TG S+ N L+ FYA CG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 151 FARQVFDEMAVRTVVTWSSMIAAYV---GSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
A +F+ + + VV+W+S+I Y G +S + +F+EMR + PN+ TL +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 208 ACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQS 267
A S + + + G H+ + + + + T+L MY K GL++ L VF MPE+N +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 268 FTIMISALGNHGCQKDVI---SLFTQMEDMGLKPDGLSFSVILSA 309
++ M+S G ++ I +LF + ++ G D + F+ +LS+
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSS 230
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 237/427 (55%), Gaps = 51/427 (11%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P LF + I + + ++ + + +L S ++P+ FT+ LK+C+ S G
Sbjct: 91 IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GK 146
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT--------------- 163
+ H+ LK GL D Y L+ YA G + A++VFD M R+
Sbjct: 147 LIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 164 ----------------VVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLL 206
+V+W+ MI Y P++AL +FQ++ + KP+ +T+V+ L
Sbjct: 207 NVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
SACS++ + G IH ++ + + ++V++ T L +MY+KCG +++A+LVFN P K++
Sbjct: 267 SACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIV 326
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDM-GLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
++ MI+ HG +D + LF +M+ + GL+P ++F L AC+H GLV+EG F+
Sbjct: 327 AWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFES 386
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP 385
M + Y IKP +EHYGC+V LL RAG ++ AY+ IKNM M+ ++V+ S LG+C+ G
Sbjct: 387 MGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG--- 443
Query: 386 SLDDKLMSKLESE--LGAN------YVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGC 437
D ++ K +E +G N YVL +N++++ ++ + +R MK+KG+ K PG
Sbjct: 444 ---DFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 438 SWLEVQN 444
S +E++N
Sbjct: 501 STIEIEN 507
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 128/293 (43%), Gaps = 47/293 (16%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGL-SPDNFTYPFALKAC 108
A++ F+S+ + +WN +I A P ++L+ F++L G PD T AL AC
Sbjct: 211 ARALFDSM-CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSAC 269
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+++ +L G H + + + L+ Y+ CG++ A VF++ + +V W+
Sbjct: 270 SQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWN 329
Query: 169 SMIAAYVGSNSPSEALHVFQEMR-LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
+MIA Y +AL +F EM+ + +P +T + L AC
Sbjct: 330 AMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQAC------------------ 371
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK-----NLQSFTIMISALGNHGCQK 282
A GL+ + + +F SM ++ ++ + ++S LG G K
Sbjct: 372 -----------------AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLK 414
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
+ +++M + D + +S +L +C G GK + ++ + NIK S
Sbjct: 415 RA---YETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGL-NIKNS 463
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 37/257 (14%)
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPN 198
L + YA G I + +F + + +++ I + +A ++ ++ + PN
Sbjct: 70 LHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPN 129
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
T SLL +CS +G+ IH+++ + + + + T L ++YAK G + A VF+
Sbjct: 130 EFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFD 185
Query: 259 SMPEKNLQSFTIMISALGNHG------------CQKDVIS-------------------L 287
MPE++L S T MI+ G C++D++S L
Sbjct: 186 RMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALML 245
Query: 288 FTQMEDMGL-KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
F ++ G KPD ++ LSACS +G ++ G+ + V+ I+ +V+ ++D+
Sbjct: 246 FQKLLAEGKPKPDEITVVAALSACSQIGALETGR-WIHVFVKSSRIRLNVKVCTGLIDMY 304
Query: 347 ARAGLIQEAYDIIKNMP 363
++ G ++EA + + P
Sbjct: 305 SKCGSLEEAVLVFNDTP 321
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 232/445 (52%), Gaps = 35/445 (7%)
Query: 31 NPYLISQFL-LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL 89
+P++ + F+ + AS + +A++ F+ + + WNT+I E+ F +
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMS-HRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Query: 90 QRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
+ S + PD + AC R ++ + + ++ + D + L+ YA G +
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263
Query: 150 GFARQVFDEMAVRTV-------------------------------VTWSSMIAAYVGSN 178
AR+ F +M+VR + V W++MI+AYV S+
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD 323
Query: 179 SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
P EAL VF+EM + KP+ V++ S++SAC+ + + + +HS I N ++ + +
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINN 383
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP 298
AL MYAKCG + VF MP +N+ S++ MI+AL HG D +SLF +M+ ++P
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
+ ++F +L CSH GLV+EGK F M YNI P +EHYGCMVDL RA L++EA ++
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEV 503
Query: 359 IKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLTANVFSTCASW 416
I++MP+ N VI S + ACR G + K + +LE + VL +N+++ W
Sbjct: 504 IESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRW 563
Query: 417 KDASNLRLAMKQKGLKKNPGCSWLE 441
+D N+R M++K + K G S ++
Sbjct: 564 EDVRNIRRVMEEKNVFKEKGLSRID 588
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 182/366 (49%), Gaps = 33/366 (9%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC 108
+A + F+S+P P +N +R L+ S P +++F++R++ G D F++ LKA
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAV 121
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
++VS+L G H + K D + + + YA CG I +AR VFDEM+ R VVTW+
Sbjct: 122 SKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWN 181
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+MI Y EA +F+EM+ +N P+ + L +++SAC + N+ +I+ ++ N
Sbjct: 182 TMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 229 HVDMSVELGTALFEMYA-------------------------------KCGLMKKALLVF 257
V M L TAL MYA KCG + A ++F
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 258 NSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVD 317
+ +K+L +T MISA ++ + +F +M G+KPD +S ++SAC+++G++D
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 318 EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
+ K + + + ++ + ++++ A+ G + D+ + MP N V S + A
Sbjct: 362 KAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419
Query: 378 CRNQGS 383
G
Sbjct: 420 LSMHGE 425
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 219/399 (54%), Gaps = 5/399 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS--GLSPDNFTYPFALKA 107
A+ F+ +P L +WN++I + + R+ S G P+ T+ + A
Sbjct: 85 AEKLFDEMP-ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143
Query: 108 CARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
C S G H L +K G+ + N + +Y G + + ++F++++++ +V+W
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSW 203
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
++MI ++ + + L F R +P+ T +++L +C M V + IH I
Sbjct: 204 NTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ + TAL ++Y+K G ++ + VF+ + + ++T M++A HG +D I
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKH 323
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
F M G+ PD ++F+ +L+ACSH GLV+EGK YF+ M + Y I P ++HY CMVDLL
Sbjct: 324 FELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 348 RAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVL 405
R+GL+Q+AY +IK MPMEP++ + + LGACR + + + + +LE G NYV+
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVM 443
Query: 406 TANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+N++S WKDAS +R MKQKGL + GCS++E N
Sbjct: 444 LSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGN 482
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 19/245 (7%)
Query: 86 FRRL-QRSGLSPDNFTYPF---------ALKACARVS--SLSHGGVFHSLTLKTGLSSDC 133
FR L +R LS +F + A+K+C + L H V S++ + G D
Sbjct: 12 FRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGD- 70
Query: 134 YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLA 193
L+ Y G A ++FDEM R +V+W+S+I+ Y G + V M ++
Sbjct: 71 ----QLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 194 NE--KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK 251
+PN VT +S++SAC + G IH + + V V++ A Y K G +
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 252 KALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS 311
+ +F + KNL S+ MI +G + ++ F +G +PD +F +L +C
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 312 HMGLV 316
MG+V
Sbjct: 247 DMGVV 251
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 207/379 (54%), Gaps = 2/379 (0%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+W +I+ LA + E++ FR ++ GL D + + L AC + +++ G H+
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
++T Y + L+ Y C + +A+ VFD M + VV+W++M+ Y + EA+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
+F +M+ + P+ TL +SAC+ + ++ G H + + V + +L +Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
KCG + + +FN M ++ S+T M+SA G + I LF +M GLKPDG++ +
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 305 VILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM 364
++SACS GLV++G+ YF M Y I PS+ HY CM+DL +R+G ++EA I MP
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 365 EPNAVILRSFLGACRNQGS--VPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNL 422
P+A+ + L ACRN+G+ + + + +L+ A Y L ++++++ W + L
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 423 RLAMKQKGLKKNPGCSWLE 441
R M++K +KK PG SW++
Sbjct: 597 RRGMREKNVKKEPGQSWIK 615
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 188/475 (39%), Gaps = 104/475 (21%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL-QRSGLSPDNFTYPFA 104
S +A+ F+ +P P LF+WN ++ A + + E F +L R G++ + ++
Sbjct: 56 SSTYARRVFDRIP-QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYS 114
Query: 105 LKAC-------------------ARVS------------SLSHGGVFHSLTLKTGLSSDC 133
L RV+ +S G H +K G S
Sbjct: 115 LSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYL 174
Query: 134 YTDNTLLKFYADCGAIGFARQVFDEMAVRTVV---------------------------- 165
+ LL YA+ G I A++VF + R V
Sbjct: 175 LVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKD 234
Query: 166 --TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
+W++MI + EA+ F+EM++ K + S+L AC + ++ G+ IH+
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
I R + + +G+AL +MY KC + A VF+ M +KN+ S+T M+ G G ++
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR---------------MVR 328
+ +F M+ G+ PD + +SAC+++ ++EG + + +V
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 329 MY----------------NIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAV 369
+Y N++ +V + MV A+ G E + M ++P+ V
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 370 ILRSFLGACRNQGSVPSLDDKLMSKLESELG-----ANYVLTANVFSTCASWKDA 419
L + AC G V + + SE G +Y ++FS ++A
Sbjct: 474 TLTGVISACSRAGLVEK-GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 187/313 (59%), Gaps = 4/313 (1%)
Query: 135 TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
T NT++ YA CG I A+ +FD+M R V+W++MIA Y S EAL +F +M
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
+ N + S LS C+ +V + G+ +H + + + +G AL MY KCG +++A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
+F M K++ S+ MI+ HG + + F M+ GLKPD + +LSACSH G
Sbjct: 465 DLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTG 524
Query: 315 LVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSF 374
LVD+G+ YF M + Y + P+ +HY CMVDLL RAGL+++A++++KNMP EP+A I +
Sbjct: 525 LVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Query: 375 LGACRNQGSV---PSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGL 431
LGA R G+ + DK+ + +E E YVL +N++++ W D LR+ M+ KG+
Sbjct: 585 LGASRVHGNTELAETAADKIFA-MEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 432 KKNPGCSWLEVQN 444
KK PG SW+E+QN
Sbjct: 644 KKVPGYSWIEIQN 656
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 125/280 (44%), Gaps = 34/280 (12%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
AK+ F+ +P P+ +W +I + S E+L F +++R G + ++ AL CA
Sbjct: 362 AKNLFDKMPKRDPV-SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
V +L G H +K G + C+ N LL Y CG+I A +F EMA + +V+W++
Sbjct: 421 DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT 480
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MIA Y AL F+ M+ KP+ T+V++LSACS V G +T++
Sbjct: 481 MIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQD- 539
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ MP N Q + M+ LG G +D +L
Sbjct: 540 ---------------------------YGVMP--NSQHYACMVDLLGRAGLLEDAHNL-- 568
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
M++M +PD + +L A G + + D++ M
Sbjct: 569 -MKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAM 607
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 145/329 (44%), Gaps = 50/329 (15%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+S F+ +P + +WN ++ A + E+ + F+ + L N +K
Sbjct: 176 ARSVFDRMPEKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
V + F S+ ++ D + NT++ YA G I ARQ+FDE V+ V TW++
Sbjct: 235 IVEARQ---FFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
M++ Y+ + EA +F +M NE VS + Y+
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNE-------------------VSWNAMLAGYVQGER 327
Query: 230 VDMSVEL-----------GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNH 278
++M+ EL + YA+CG + +A +F+ MP+++ S+ MI+
Sbjct: 328 MEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 279 GCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
G + + LF QME G + + SFS LS C+ + ++ GK R+V K E
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV-----KGGYE- 441
Query: 339 YGCMVD-----LLARAGLIQEAYDIIKNM 362
GC V + + G I+EA D+ K M
Sbjct: 442 TGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 26/287 (9%)
Query: 132 DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR 191
D + NT+L YA G + AR VFD M + V+W+++++AYV ++ EA +F+
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--- 212
Query: 192 LANEKPNSVTLVSLLSA-CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLM 250
+ E V+ LL K V A + S R+ V + + YA+ G +
Sbjct: 213 -SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNT-----IITGYAQSGKI 266
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
+A +F+ P +++ ++T M+S + ++ LF +M + + +S++ +L+
Sbjct: 267 DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGY 322
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKP--SVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNA 368
++ K FD M P +V + M+ A+ G I EA ++ MP
Sbjct: 323 VQGERMEMAKELFDVM-------PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 369 VILRSFLGACRNQGSVPSLDDKLMSKLESELGA-NYVLTANVFSTCA 414
G ++ S +L +L ++E E G N ++ STCA
Sbjct: 376 SWAAMIAGYSQSGHSFEAL--RLFVQMEREGGRLNRSSFSSALSTCA 420
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 126/287 (43%), Gaps = 21/287 (7%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N ++ Y G AR++FDEM R +V+W+ MI YV + + +A +F+ M +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PE 154
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYI-TRNHVDMSVELGTALFEMYAKCGLMKKALL 255
+ + ++LS ++ V S+ + +N V + AL Y + M++A +
Sbjct: 155 RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN-----ALLSAYVQNSKMEEACM 209
Query: 256 VFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
+F S L S+ + LG +K ++ + M ++ D +S++ I++ + G
Sbjct: 210 LFKSRENWALVSWNCL---LGGFVKKKKIVEARQFFDSMNVR-DVVSWNTIITGYAQSGK 265
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
+DE + FD + V + MV + +++EA ++ MP E N V + L
Sbjct: 266 IDEARQLFDE-----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAML 319
Query: 376 GACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNL 422
A QG + +L + + + ++ C +A NL
Sbjct: 320 -AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNL 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 34/278 (12%)
Query: 104 ALKACARVSSLSHGGV-FHSLT---------------LKTGLSSDCYTDNTLLKFYADCG 147
+L R + +HG FHSL LK G SD N + Y G
Sbjct: 20 SLNGLKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTG 78
Query: 148 AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
A +VF M + V+++ MI+ Y+ + A +F EM + + V+ ++
Sbjct: 79 RCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM----PERDLVSWNVMIK 134
Query: 208 ACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQS 267
+ N+ + + + V + YA+ G + A VF+ MPEKN S
Sbjct: 135 GYVRNRNLGKARELFEIMP----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVS 190
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
+ ++SA + ++ LF E+ L +S++ +L + E + +FD M
Sbjct: 191 WNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSM- 245
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
N++ V + ++ A++G I EA + P++
Sbjct: 246 ---NVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQ 279
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 230/409 (56%), Gaps = 6/409 (1%)
Query: 40 LSASTISLPFAKSFFNSLPITP-PLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDN 98
L A L A++ F LP+ + +W I+ A A + P+E+L F ++++ + PD
Sbjct: 163 LYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 99 FTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE 158
L A + L G H+ +K GL + +L YA CG + A+ +FD+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 159 MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAG 218
M ++ W++MI+ Y + EA+ +F EM + +P+++++ S +SAC+++ ++
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 219 ESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNH 278
S++ Y+ R+ V + +AL +M+AKCG ++ A LVF+ ++++ ++ MI G H
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 279 GCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
G ++ ISL+ ME G+ P+ ++F +L AC+H G+V EG +F+RM + I P +H
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQH 461
Query: 339 YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD---DKLMSKL 395
Y C++DLL RAG + +AY++IK MP++P + + L AC+ V + +L S
Sbjct: 462 YACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSID 521
Query: 396 ESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
S G +YV +N+++ W + +R+ MK+KGL K+ GCSW+EV+
Sbjct: 522 PSNTG-HYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 193/326 (59%), Gaps = 5/326 (1%)
Query: 33 YLISQFLLSASTI-SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR 91
+LI++ + ++S+ + FA+ F+ LP P +F WN IIR + + ++L+ + +Q
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLP-RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 92 SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
+ +SPD+FT+P LKAC+ +S L G H+ + G +D + N L+ YA C +G
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 152 ARQVFDEMAV--RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
AR VF+ + + RT+V+W+++++AY + P EAL +F +MR + KP+ V LVS+L+A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFT 269
+ + ++ G SIH+ + + +++ +L +L MYAKCG + A ++F+ M NL +
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 270 IMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
MIS +G ++ I +F +M + ++PD +S + +SAC+ +G +++ + ++ + R
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 330 YNIKPSVEHYGCMVDLLARAGLIQEA 355
+ + V ++D+ A+ G ++ A
Sbjct: 353 -DYRDDVFISSALIDMFAKCGSVEGA 377
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 92 SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
SG+ D+F Y + + + L H+ L GL + L+ + G I F
Sbjct: 16 SGIHSDSF-YASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
ARQVFD++ + W+++I Y +N +AL ++ M+LA P+S T LL ACS
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS--MPEKNLQSFT 269
+ ++ G +H+ + R D V + L +YAKC + A VF +PE+ + S+T
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 270 IMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS----------------HM 313
++SA +G + + +F+QM M +KPD ++ +L+A + M
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 314 GL-------------------VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
GL V K+ FD+M P++ + M+ A+ G +E
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVATAKILFDKMK-----SPNLILWNAMISGYAKNGYARE 306
Query: 355 AYDIIKNM---PMEPNAVILRSFLGACRNQGSV 384
A D+ M + P+ + + S + AC GS+
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSL 339
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 220/397 (55%), Gaps = 34/397 (8%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E+L F + SG+ PD + A+ +C+++ ++ G H L+ G S N L+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN------ 194
Y C A ++FD M+ +TVVTW+S++A YV + A F+ M N
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 195 ------------------------EKPNS--VTLVSLLSACSKMVNVSAGESIHSYITRN 228
E N+ VT++S+ SAC + + + I+ YI +N
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ + V LGT L +M+++CG + A+ +FNS+ +++ ++T I A+ G + I LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M + GLKPDG++F L+ACSH GLV +GK F M++++ + P HYGCMVDLL R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLT 406
AGL++EA +I++MPMEPN VI S L ACR QG+V + + + L E +YVL
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+NV+++ W D + +RL+MK+KGL+K PG S ++++
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIR 716
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 160/276 (57%), Gaps = 1/276 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
SL FAK F + F +N++IR A+S E+++ F R+ SG+SPD +T+PF L
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL 141
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
ACA+ + +G H L +K G + D + N+L+ FYA+CG + AR+VFDEM+ R VV
Sbjct: 142 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 201
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+W+SMI Y + +A+ +F M R PNSVT+V ++SAC+K+ ++ GE ++++
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
I + ++++ + +AL +MY KC + A +F+ NL M S G ++
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+ +F M D G++PD +S +S+CS + + GK
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 161/349 (46%), Gaps = 35/349 (10%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYPFAL 105
L A+ F+ + + +W ++I A +++ +FFR ++ ++P++ T +
Sbjct: 185 LDSARKVFDEMS-ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
ACA++ L G ++ +G+ + + L+ Y C AI A+++FDE +
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
++M + YV EAL VF M + +P+ ++++S +S+CS++ N+ G+S H Y+
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 226 TRNHVDMSVELGTALFEMYAKC-------------------------------GLMKKAL 254
RN + + AL +MY KC G + A
Sbjct: 364 LRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM-GLKPDGLSFSVILSACSHM 313
F +MPEKN+ S+ +IS L ++ I +F M+ G+ DG++ I SAC H+
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 314 GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
G +D K + + I+ V +VD+ +R G + A I ++
Sbjct: 484 GALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 35/265 (13%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQ-RSGLSPDNFTYPFALKACARVS 112
F ++P + +WNTII L E++ F +Q + G++ D T AC +
Sbjct: 426 FETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 113 SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
+L + K G+ D TL+ ++ CG A +F+ + R V W++ I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
A + + A+ +F +M KP+ V V L+ACS V G+ I + + H
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH--- 601
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
G + +++ C M+ LG G ++ + L +E
Sbjct: 602 ----GVSPEDVHYGC-----------------------MVDLLGRAGLLEEAVQL---IE 631
Query: 293 DMGLKPDGLSFSVILSACSHMGLVD 317
DM ++P+ + ++ +L+AC G V+
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVE 656
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 236/418 (56%), Gaps = 7/418 (1%)
Query: 30 HNPYLISQFLLS-ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
+N + + F+ S A SL +A+ F+ + + + +WN +I A S P SL +
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIR-SKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
++ SGL PD+FT L AC+++ SL G H ++ L D + ++L Y CG
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 546
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+ + +FD M +++V+W+++I Y+ + P AL VF++M L + ++++ + A
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 606
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
CS + ++ G H+Y ++ ++ + +L +MYAK G + ++ VFN + EK+ S+
Sbjct: 607 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 666
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
MI G HG K+ I LF +M+ G PD L+F +L+AC+H GL+ EG Y D+M
Sbjct: 667 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKS 726
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEAYDII-KNMPMEPNAVILRSFLGACRNQGSVPSL 387
+ +KP+++HY C++D+L RAG + +A ++ + M E + I +S L +CR ++ +
Sbjct: 727 SFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL-EM 785
Query: 388 DDKLMSK---LESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+K+ +K LE E NYVL +N+++ W+D +R M + L+K+ GCSW+E+
Sbjct: 786 GEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 7/257 (2%)
Query: 63 LFAWNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFH 121
LF WN +I + + + E L F + + L PD+FTYP +KACA +S + G H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
L +KTGL D + N L+ FY G + A Q+FD M R +V+W+SMI + +
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 182 EALHVFQEMRLANEK----PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
E+ + EM N P+ TLV++L C++ + G+ +H + + +D + L
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN 330
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG-- 295
AL +MY+KCG + A ++F KN+ S+ M+ G + QM G
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 296 LKPDGLSFSVILSACSH 312
+K D ++ + C H
Sbjct: 391 VKADEVTILNAVPVCFH 407
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 150/310 (48%), Gaps = 11/310 (3%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSG--LSPDNFTYPFALKACARVSSLSHGGVFHS 122
+WNT++ + + R++ G + D T A+ C S L H
Sbjct: 360 SWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 419
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+LK + N + YA CG++ +A++VF + +TV +W+++I + SN P
Sbjct: 420 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 479
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
+L +M+++ P+S T+ SLLSACSK+ ++ G+ +H +I RN ++ + + ++
Sbjct: 480 SLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 539
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
+Y CG + +F++M +K+L S+ +I+ +G + +F QM G++ G+S
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH---YGC-MVDLLARAGLIQEAYDI 358
+ ACS + + G R Y +K +E C ++D+ A+ G I ++ +
Sbjct: 600 MMPVFGACSLLPSLRLG-----REAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 359 IKNMPMEPNA 368
+ + A
Sbjct: 655 FNGLKEKSTA 664
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 10/317 (3%)
Query: 105 LKACARVSSLSHGGVFHSL-TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT 163
L+A + + G H L + T L +D ++ YA CG+ +R VFD + +
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
+ W+++I++Y + E L F EM + P+ T ++ AC+ M +V G ++H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
+ + + V +G AL Y G + AL +F+ MPE+NL S+ MI ++G +
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 283 DVISLFTQM----EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
+ L +M D PD + +L C+ + GK V++ K V +
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN 330
Query: 339 YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLE-- 396
M D+ ++ G I A I K M N V + +G +G D L L
Sbjct: 331 NALM-DMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 397 SELGANYVLTANVFSTC 413
++ A+ V N C
Sbjct: 389 EDVKADEVTILNAVPVC 405
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 218/397 (54%), Gaps = 34/397 (8%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E+L F + SG+ PD + A+ +C+++ ++ G H L+ G S N L+
Sbjct: 320 EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN------ 194
Y C A ++FD M+ +TVVTW+S++A YV + A F+ M N
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 195 --------------------------EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+ VT++S+ SAC + + + I+ YI +N
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ + V LGT L +M+++CG + A+ +FNS+ +++ ++T I A+ G + I LF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M + GLKPDG++F L+ACSH GLV +GK F M++++ + P HYGCMVDLL R
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLT 406
AGL++EA +I++MPMEPN VI S L ACR QG+V + + + L E +YVL
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLL 679
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+NV+++ W D + +RL+MK+KGL+K PG S ++++
Sbjct: 680 SNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIR 716
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 160/276 (57%), Gaps = 1/276 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
SL FAK F + F +N++IR A+S E+++ F R+ SG+SPD +T+PF L
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL 141
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
ACA+ + +G H L +K G + D + N+L+ FYA+CG + AR+VFDEM+ R VV
Sbjct: 142 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 201
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+W+SMI Y + +A+ +F M R PNSVT+V ++SAC+K+ ++ GE ++++
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
I + ++++ + +AL +MY KC + A +F+ NL M S G ++
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+ +F M D G++PD +S +S+CS + + GK
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 161/349 (46%), Gaps = 35/349 (10%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYPFAL 105
L A+ F+ + + +W ++I A +++ +FFR ++ ++P++ T +
Sbjct: 185 LDSARKVFDEMS-ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
ACA++ L G ++ +G+ + + L+ Y C AI A+++FDE +
Sbjct: 244 SACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD 303
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
++M + YV EAL VF M + +P+ ++++S +S+CS++ N+ G+S H Y+
Sbjct: 304 LCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Query: 226 TRNHVDMSVELGTALFEMYAKC-------------------------------GLMKKAL 254
RN + + AL +MY KC G + A
Sbjct: 364 LRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAW 423
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM-GLKPDGLSFSVILSACSHM 313
F +MPEKN+ S+ +IS L ++ I +F M+ G+ DG++ I SAC H+
Sbjct: 424 ETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHL 483
Query: 314 GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
G +D K + + I+ V +VD+ +R G + A I ++
Sbjct: 484 GALDLAKWIY-YYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 35/265 (13%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQ-RSGLSPDNFTYPFALKACARVS 112
F ++P + +WNTII L E++ F +Q + G++ D T AC +
Sbjct: 426 FETMP-EKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLG 484
Query: 113 SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
+L + K G+ D TL+ ++ CG A +F+ + R V W++ I
Sbjct: 485 ALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 544
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
A + + A+ +F +M KP+ V V L+ACS V G+ I + + H
Sbjct: 545 AMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLH--- 601
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
G + +++ C M+ LG G ++ + L +E
Sbjct: 602 ----GVSPEDVHYGC-----------------------MVDLLGRAGLLEEAVQL---IE 631
Query: 293 DMGLKPDGLSFSVILSACSHMGLVD 317
DM ++P+ + ++ +L+AC G V+
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVE 656
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 213/398 (53%), Gaps = 9/398 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS-GLSPDNFTYPFALKAC 108
A+ F+ +P P + W ++ A + + E+L F + R GL PD T+ L AC
Sbjct: 217 ARRVFDEMP-EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTAC 275
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+ L G H + G+ S+ +++LL Y CG++ ARQVF+ M+ + V+WS
Sbjct: 276 GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWS 335
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+++ Y + +A+ +F+EM E+ + ++L AC+ + V G+ IH R
Sbjct: 336 ALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR 391
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+V + +AL ++Y K G + A V++ M +N+ ++ M+SAL +G ++ +S F
Sbjct: 392 GCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFF 451
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M G+KPD +SF IL+AC H G+VDEG+ YF M + Y IKP EHY CM+DLL R
Sbjct: 452 NDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGR 511
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKL---MSKLESELGANYVL 405
AGL +EA ++++ +A + LG C + +++ M +LE + +YVL
Sbjct: 512 AGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVL 571
Query: 406 TANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+N++ DA N+R M ++G+ K G SW++
Sbjct: 572 LSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDAH 609
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 7/320 (2%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
+W +++ +++L F + GL + FT A+KAC+ + + G FH +
Sbjct: 129 ISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGV 188
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
+ G + + +TL Y AR+VFDEM V+ W+++++A+ ++ EA
Sbjct: 189 VITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEA 248
Query: 184 LHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
L +F M R P+ T ++L+AC + + G+ IH + N + +V + ++L +
Sbjct: 249 LGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLD 308
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MY KCG +++A VFN M +KN S++ ++ +G + I +F +ME+ D
Sbjct: 309 MYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYC 364
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F +L AC+ + V GK + VR +V ++DL ++G I A + M
Sbjct: 365 FGTVLKACAGLAAVRLGKEIHGQYVRR-GCFGNVIVESALIDLYGKSGCIDSASRVYSKM 423
Query: 363 PMEPNAVILRSFLGACRNQG 382
+ N + + L A G
Sbjct: 424 SIR-NMITWNAMLSALAQNG 442
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 140/283 (49%), Gaps = 5/283 (1%)
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG-AIGFARQVFDEM 159
Y L+ C +V S HG FH+ +K+GL +D N+LL Y G + R+VFD
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGR 123
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
V+ ++W+SM++ YV +AL VF EM N TL S + ACS++ V G
Sbjct: 124 FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGR 183
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
H + + + + + + L +Y A VF+ MPE ++ +T ++SA +
Sbjct: 184 CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 280 CQKDVISLFTQM-EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
++ + LF M GL PDG +F +L+AC ++ + +GK +++ I +V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI-TNGIGSNVVV 302
Query: 339 YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA-CRN 380
++D+ + G ++EA + M + N+V + LG C+N
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQN 344
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/288 (19%), Positives = 121/288 (42%), Gaps = 40/288 (13%)
Query: 181 SEALHVFQEMRLANEKPNSVTL-VSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTA 239
+EA+ + ++E P + L SLL C+K+ + G H+++ ++ ++ +G +
Sbjct: 43 TEAIRILNSTH-SSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNS 101
Query: 240 LFEMYAKCG-LMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP 298
L +Y K G M++ VF+ K+ S+T M+S + +F +M GL
Sbjct: 102 LLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDA 161
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVR---------------MYNI----------- 332
+ + S + ACS +G V G+ + ++ +Y +
Sbjct: 162 NEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVF 221
Query: 333 ----KPSVEHYGCMVDLLARAGLIQEA----YDIIKNMPMEPNAVILRSFLGACRNQGSV 384
+P V + ++ ++ L +EA Y + + + P+ + L AC N +
Sbjct: 222 DEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRL 281
Query: 385 PSLDDKLMSKLESELGANYVLTA---NVFSTCASWKDASNLRLAMKQK 429
+ + + +G+N V+ + +++ C S ++A + M +K
Sbjct: 282 KQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK 329
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 237/421 (56%), Gaps = 6/421 (1%)
Query: 30 HNPYLIS---QFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFF 86
H+P + + +F + T SL A+ F+ P WN +IR +NS +PL S++F+
Sbjct: 35 HHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFY 94
Query: 87 RRLQRSGLS-PDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
R+ S +S PD FT+ FALK+C R+ S+ H +++G D +L++ Y+
Sbjct: 95 NRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSA 154
Query: 146 CGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
G++ A +VFDEM VR +V+W+ MI + ++AL +++ M +S TLV+L
Sbjct: 155 NGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVAL 214
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
LS+C+ + ++ G +H + V + AL +MYAKCG ++ A+ VFN M ++++
Sbjct: 215 LSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDV 274
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
++ MI G HG + IS F +M G++P+ ++F +L CSH GLV EG +F+
Sbjct: 275 LTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEI 334
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP 385
M +++ P+V+HYGCMVDL RAG ++ + ++I + V+ R+ LG+C+ ++
Sbjct: 335 MSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLE 394
Query: 386 --SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+ K + +LE+ +YVL +++S + +++R ++ L+ PG SW+E+
Sbjct: 395 LGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIG 454
Query: 444 N 444
+
Sbjct: 455 D 455
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 217/401 (54%), Gaps = 5/401 (1%)
Query: 48 PFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS--GLSPDNFTYPFAL 105
P A F S+ + AW ++I L + E+L F ++ L PD+
Sbjct: 425 PDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
ACA + +L G H +KTGL + + ++L+ Y+ CG A +VF M+ +V
Sbjct: 484 NACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV 543
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
W+SMI+ Y +N P ++ +F M P+SV++ S+L A S ++ G+S+H Y
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
R + L AL +MY KCG K A +F M K+L ++ +MI G+HG +
Sbjct: 604 LRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITAL 663
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
SLF +M+ G PD ++F ++SAC+H G V+EGK F+ M + Y I+P++EHY MVDL
Sbjct: 664 SLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDL 723
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANY 403
L RAGL++EAY IK MP+E ++ I L A R +V L + + ++E E G+ Y
Sbjct: 724 LGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTY 783
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
V N++ +A+ L MK+KGL K PGCSW+EV +
Sbjct: 784 VQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSD 824
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 171/335 (51%), Gaps = 5/335 (1%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
WN +I S SL + + + + + ++ AL AC++ + G H +
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
K GL +D Y +LL Y+ CG +G A VF + + + W++M+AAY ++ AL
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
+F MR + P+S TL +++S CS + + G+S+H+ + + + + + +AL +Y+
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM--EDMGLKPDGLSF 303
KCG A LVF SM EK++ ++ +IS L +G K+ + +F M +D LKPD
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
+ + +AC+ + + G M++ + +V ++DL ++ GL + A + +M
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS 538
Query: 364 MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE 398
E N V S + +C ++ ++P L L + + S+
Sbjct: 539 TE-NMVAWNSMI-SCYSRNNLPELSIDLFNLMLSQ 571
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 161/336 (47%), Gaps = 4/336 (1%)
Query: 30 HN-PYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
HN PY+ + L S + S + L WN ++ A A + +L F
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
+++ + PD+FT + C+ + ++G H+ K + S ++ LL Y+ CG
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGC 423
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE--KPNSVTLVSLL 206
A VF M + +V W S+I+ + EAL VF +M+ ++ KP+S + S+
Sbjct: 424 DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVT 483
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
+AC+ + + G +H + + + ++V +G++L ++Y+KCGL + AL VF SM +N+
Sbjct: 484 NACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV 543
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
++ MIS + + I LF M G+ PD +S + +L A S + +GK
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+R+ I ++D+ + G + A +I K M
Sbjct: 604 LRL-GIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 146/306 (47%), Gaps = 24/306 (7%)
Query: 67 NTIIRALANSPTPLESLVFFRRLQRSGLSP---DNFTYPFALKACARVSSLSHGGVFHSL 123
N+ IRAL L++L + + G SP FT+P LKAC+ +++LS+G H
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD-------EMAVRTVVTWSSMIAAYVG 176
+ G D + +L+ Y CG + +A QVFD ++ R V W+SMI Y
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNV--SAGESIHSYITRNHVDMSV 234
E + F+ M + +P++ +L ++S K N G+ IH ++ RN +D
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK-NLQSFTIMISALGNHGCQKDVISLFTQMED 293
L TAL +MY K GL A VF + +K N+ + +MI G G + + L+ ++
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM--YNIKPSVEHYGC--MVDLLARA 349
+K SF+ L ACS G+ +V+M +N + Y C ++ + ++
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN-----DPYVCTSLLSMYSKC 320
Query: 350 GLIQEA 355
G++ EA
Sbjct: 321 GMVGEA 326
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 128/251 (50%), Gaps = 4/251 (1%)
Query: 31 NPYLISQFLLSASTISLP-FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL 89
N ++ S + S LP A F S+ T + AWN++I + + P S+ F +
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMS-TENMVAWNSMISCYSRNNLPELSIDLFNLM 568
Query: 90 QRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
G+ PD+ + L A + +SL G H TL+ G+ SD + N L+ Y CG
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 628
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
+A +F +M ++++TW+ MI Y AL +F EM+ A E P+ VT +SL+SAC
Sbjct: 629 KYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISAC 688
Query: 210 SKMVNVSAGESIHSYITRNH-VDMSVELGTALFEMYAKCGLMKKALLVFNSMP-EKNLQS 267
+ V G++I ++ +++ ++ ++E + ++ + GL+++A +MP E +
Sbjct: 689 NHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSI 748
Query: 268 FTIMISALGNH 278
+ ++SA H
Sbjct: 749 WLCLLSASRTH 759
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 6/319 (1%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSL--SHGGVFHSL 123
WN++I E + FRR+ G+ PD F+ + + + G H
Sbjct: 136 WNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGF 195
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT-VVTWSSMIAAYVGSNSPSE 182
L+ L +D + L+ Y G A +VF E+ ++ VV W+ MI + GS
Sbjct: 196 MLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICES 255
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
+L ++ + + K S + L ACS+ N G IH + + + + T+L
Sbjct: 256 SLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS 315
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MY+KCG++ +A VF+ + +K L+ + M++A + + LF M + PD +
Sbjct: 316 MYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFT 375
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
S ++S CS +GL + GK + + I+ + ++ L ++ G +AY + K+M
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Query: 363 PMEPNAVILRSFL-GACRN 380
E + V S + G C+N
Sbjct: 435 E-EKDMVAWGSLISGLCKN 452
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 226/412 (54%), Gaps = 8/412 (1%)
Query: 40 LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPL-ESLVFFRRLQRSGLSPDN 98
L A T L + F+S+P + +WN+II ALA S L E++V F QR+G +
Sbjct: 459 LYAETGYLNECRKIFSSMPEHDQV-SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNR 517
Query: 99 FTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE 158
T+ L A + +S G H L LK ++ + T+N L+ Y CG + ++F
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSR 577
Query: 159 MAVRTV-VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSA 217
MA R VTW+SMI+ Y+ + ++AL + M ++ +S ++LSA + + +
Sbjct: 578 MAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 637
Query: 218 GESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGN 277
G +H+ R ++ V +G+AL +MY+KCG + AL FN+MP +N S+ MIS
Sbjct: 638 GMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYAR 697
Query: 278 HGCQKDVISLFTQME-DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
HG ++ + LF M+ D PD ++F +LSACSH GL++EG +F+ M Y + P +
Sbjct: 698 HGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRI 757
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA-CRNQGSVPSLDDK---LM 392
EH+ CM D+L RAG + + D I+ MPM+PN +I R+ LGA CR G L K ++
Sbjct: 758 EHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEML 817
Query: 393 SKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+LE E NYVL N+++ W+D R MK +KK G SW+ +++
Sbjct: 818 FQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKD 869
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 161/354 (45%), Gaps = 23/354 (6%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY-PFA 104
S+ +A F + + + +WN+II + + + F +Q G P +T+
Sbjct: 155 SVGYALCAFGDIEVKNSV-SWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 105 LKACARVSSLSHGGV-----FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
AC SL+ V K+GL +D + + L+ +A G++ +AR+VF++M
Sbjct: 214 TTAC----SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR-LANEKPNSVTLVSLLS-----ACSKMV 213
R VT + ++ V EA +F +M + + P S + LLS + ++ V
Sbjct: 270 ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEV 327
Query: 214 NVSAGESIHSY-ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMI 272
+ G +H + IT VD V +G L MYAKCG + A VF M +K+ S+ MI
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 273 SALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNI 332
+ L +GC + + + M + P + LS+C+ + G+ +++ I
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GI 446
Query: 333 KPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA-CRNQGSVP 385
+V ++ L A G + E I +MP E + V S +GA R++ S+P
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGALARSERSLP 499
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 177/397 (44%), Gaps = 18/397 (4%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG 93
LI+ +L + ++S A+ F+ +P+ + +W I+ + + E+LVF R + + G
Sbjct: 42 LINAYLETGDSVS---ARKVFDEMPLRNCV-SWACIVSGYSRNGEHKEALVFLRDMVKEG 97
Query: 94 LSPDNFTYPFALKACARVSSLS--HGGVFHSLTLKTGLSSDCYTDNTLLKFYADC-GAIG 150
+ + + + L+AC + S+ G H L K + D N L+ Y C G++G
Sbjct: 98 IFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVG 157
Query: 151 FARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL-SAC 209
+A F ++ V+ V+W+S+I+ Y + A +F M+ +P T SL+ +AC
Sbjct: 158 YALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTAC 217
Query: 210 S-KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
S +V E I I ++ + + +G+ L +AK G + A VFN M +N +
Sbjct: 218 SLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTL 277
Query: 269 TIMISALGNHGCQKDVISLFTQMEDM-GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
++ L ++ LF M M + P+ S+ ++LS+ L +E + R V
Sbjct: 278 NGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREV 335
Query: 328 RMYNIKPSVEHY-----GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
+ I + + +V++ A+ G I +A + M + ++V S + G
Sbjct: 336 HGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNG 394
Query: 383 SVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDA 419
++ S ++ + S+CAS K A
Sbjct: 395 CFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 9/247 (3%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS- 92
L+S F A + SL +A+ FN + T N ++ L E+ F +
Sbjct: 249 LVSAF---AKSGSLSYARKVFNQME-TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 93 GLSPDNFTY---PFALKACARVSSLSHGGVFHSLTLKTGLSSDCY-TDNTLLKFYADCGA 148
+SP+++ F + A L G H + TGL N L+ YA CG+
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
I AR+VF M + V+W+SMI + EA+ ++ MR + P S TL+S LS+
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
C+ + G+ IH + +D++V + AL +YA+ G + + +F+SMPE + S+
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 269 TIMISAL 275
+I AL
Sbjct: 485 NSIIGAL 491
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 18/249 (7%)
Query: 112 SSLSHGGV---FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
S + H G FHS K L D Y N L+ Y + G AR+VFDEM +R V+W+
Sbjct: 12 SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKM--VNVSAGESIHSYIT 226
+++ Y + EAL ++M N VS+L AC ++ V + G IH +
Sbjct: 72 CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMF 131
Query: 227 RNHVDMSVELGTALFEMYAKC-GLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
+ + + L MY KC G + AL F + KN S+ +IS G Q+
Sbjct: 132 KLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 286 SLFTQMEDMGLKPDGLSF-SVILSACSHMGLVDEGKMYFDRMVRMY-NIKPSVEHYGCMV 343
+F+ M+ G +P +F S++ +ACS + VR+ I +++ G +
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACS----------LTEPDVRLLEQIMCTIQKSGLLT 241
Query: 344 DLLARAGLI 352
DL +GL+
Sbjct: 242 DLFVGSGLV 250
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 212/397 (53%), Gaps = 4/397 (1%)
Query: 51 KSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACAR 110
+ F+ +P ++N +I + + + SL FFR +Q G NF + L A
Sbjct: 305 RMLFDEMP-ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 111 VSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSM 170
+SSL G H L S + N+L+ YA C A +F + RT V+W+++
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTAL 423
Query: 171 IAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
I+ YV L +F +MR +N + + T ++L A + ++ G+ +H++I R+
Sbjct: 424 ISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGN 483
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQ 290
+V G+ L +MYAKCG +K A+ VF MP++N S+ +ISA ++G + I F +
Sbjct: 484 LENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAK 543
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
M + GL+PD +S +L+ACSH G V++G YF M +Y I P +HY CM+DLL R G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 351 LIQEAYDIIKNMPMEPNAVILRSFLGACR---NQGSVPSLDDKLMSKLESELGANYVLTA 407
EA ++ MP EP+ ++ S L ACR NQ +KL S + A YV +
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 663
Query: 408 NVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
N+++ W+ +++ AM+++G+KK P SW+EV +
Sbjct: 664 NIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNH 700
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 187/389 (48%), Gaps = 6/389 (1%)
Query: 29 DHNPYL-ISQFLLSA--STISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVF 85
D NP+L +S LL + L A F +P + +NT+I ES+
Sbjct: 179 DTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV-TFNTLITGYEKDGLYTESIHL 237
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
F ++++SG P +FT+ LKA + + G H+L++ TG S D N +L FY+
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 146 CGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
+ R +FDEM V+++ +I++Y ++ +LH F+EM+ + ++
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
LS + + ++ G +H D + +G +L +MYAKC + ++A L+F S+P++
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
S+T +IS G + LFT+M L+ D +F+ +L A + + GK
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP 385
++R N++ G +VD+ A+ G I++A + + MP + NAV + + A + G
Sbjct: 478 IIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGE 535
Query: 386 SLDDKLMSKLESELGANYVLTANVFSTCA 414
+ +ES L + V V + C+
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACS 564
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 15/249 (6%)
Query: 77 PTP---LESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG-GVFHSLTLKTGLSSD 132
P+P L++ R+ ++G D F ++ R +S V+ + K +S+
Sbjct: 24 PSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVST- 82
Query: 133 CYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRL 192
NT++ + G + AR +FD M RTVVTW+ ++ Y ++ EA +F++M
Sbjct: 83 ----NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 193 ANE--KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS--VELGTALFEMYAKCG 248
++ P+ VT +LL C+ V +A +H++ + D + + + L + Y +
Sbjct: 139 SSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR 198
Query: 249 LMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
+ A ++F +PEK+ +F +I+ G + I LF +M G +P +FS +L
Sbjct: 199 RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 309 ACSHMGLVD 317
A +GL D
Sbjct: 259 AV--VGLHD 265
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 217/401 (54%), Gaps = 4/401 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
SL A+ F +P W T+I + P ++L+FF ++ R G SP+ FT +
Sbjct: 110 SLEEARKVFEKMP-QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
KA A G H +K G S+ + + LL Y G + A+ VFD + R V
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+W+++IA + + +AL +FQ M +P+ + SL ACS + G+ +H+Y+
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
++ + G L +MYAK G + A +F+ + ++++ S+ +++A HG K+ +
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
F +M +G++P+ +SF +L+ACSH GL+DEG Y++ +++ I P HY +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE-LMKKDGIVPEAWHYVTVVDL 407
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANY 403
L RAG + A I+ MP+EP A I ++ L ACR + + + + +L+ + +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
V+ N++++ W DA+ +R MK+ G+KK P CSW+E++N
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 26/347 (7%)
Query: 56 SLPITPPLFAWNTIIRALANSPTPL------ESLVF----------FRRLQRSGLSPDNF 99
+L P L + + R L + P P+ ESL F L+ S + D
Sbjct: 2 ALRFPPRLLSQLKLSRRLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRR 61
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
Y LK C L G + H+ L++ D NTLL YA CG++ AR+VF++M
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
R VTW+++I+ Y + P +AL F +M PN TL S++ A + G
Sbjct: 122 PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGH 181
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
+H + + D +V +G+AL ++Y + GLM A LVF+++ +N S+ +I+
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS---V 336
+ + LF M G +P S++ + ACS G +++GK V Y IK V
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK-----WVHAYMIKSGEKLV 296
Query: 337 EHYG-CMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
G ++D+ A++G I +A I + + + V S L A G
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHG 342
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/440 (33%), Positives = 229/440 (52%), Gaps = 44/440 (10%)
Query: 41 SASTISLPFAKSFFNSLPITPPLFAWNTIIRALA-NSPTPLESLVFFRRLQRSGLSPDNF 99
SAS + +A S F + P F +NTIIR + P+ L S FF ++R + PD
Sbjct: 58 SASKEVVSYATSVFRFIT-NPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFH 116
Query: 100 TYPFALKACA--RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD 157
T+PF KACA + L+ H L+ GL SD +T NTL++ Y+ I A Q+FD
Sbjct: 117 TFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFD 176
Query: 158 E-------------------------------MAVRTVVTWSSMIAAYVGSNSPSEALHV 186
E M +R +V+W+S+I+ Y N EA+ +
Sbjct: 177 ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKL 236
Query: 187 FQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAK 246
F EM KP++V +VS LSAC++ + G++IH Y R + + L T L + YAK
Sbjct: 237 FDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAK 296
Query: 247 CGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVI 306
CG + A+ +F +K L ++ MI+ L HG + + F +M G+KPDG++F +
Sbjct: 297 CGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISV 356
Query: 307 LSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME- 365
L CSH GLVDE + FD+M +Y++ ++HYGCM DLL RAGLI+EA ++I+ MP +
Sbjct: 357 LVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Query: 366 ---PNAVILRSFLGACRNQGSVPSLDDKLMSKLES---ELGANYVLTANVFSTCASWKDA 419
+ LG CR G++ + +K +++++ E G Y + +++ W++
Sbjct: 417 GNREKLLAWSGLLGGCRIHGNI-EIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEV 475
Query: 420 SNLR-LAMKQKGLKKNPGCS 438
+R + + K +KKN G S
Sbjct: 476 VKVREIIDRDKKVKKNVGFS 495
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 211/395 (53%), Gaps = 3/395 (0%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ FNS+ + +WN+II S +E++ F+ + D+ TY +
Sbjct: 361 ARDVFNSMECKDTV-SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST 419
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
R++ L G HS +K+G+ D N L+ YA CG +G + ++F M VTW++
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNT 479
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I+A V + L V +MR + P+ T + L C+ + G+ IH + R
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ +++G AL EMY+KCG ++ + VF M +++ ++T MI A G +G + + F
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
ME G+ PD + F I+ ACSH GLVDEG F++M Y I P +EHY C+VDLL+R+
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRS 659
Query: 350 GLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD--DKLMSKLESELGANYVLTA 407
I +A + I+ MP++P+A I S L ACR G + + + + + +L + +L +
Sbjct: 660 QKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS 719
Query: 408 NVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
N ++ W S +R ++K K + KNPG SW+EV
Sbjct: 720 NAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 4/312 (1%)
Query: 52 SFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARV 111
S F + ++ WN+IIRA + + E+L F+ +L+ S +SPD +T+P +KACA +
Sbjct: 60 SVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 112 SSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMI 171
G + + L G SD + N L+ Y+ G + ARQVFDEM VR +V+W+S+I
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 172 AAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVD 231
+ Y EAL ++ E++ + P+S T+ S+L A ++ V G+ +H + ++ V+
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 232 MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM 291
V + L MY K A VF+ M ++ S+ MI ++ + +F +
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPSVEHYGCMVDLLARAG 350
D KPD L+ S +L AC H+ + K ++ M++ + ++ +V + ++D+ A+ G
Sbjct: 300 LDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCG 356
Query: 351 LIQEAYDIIKNM 362
+ A D+ +M
Sbjct: 357 DMITARDVFNSM 368
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 157/314 (50%), Gaps = 5/314 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYPFALKAC 108
A+ F+ + + + ++NT+I ES+ +F L + PD T L+AC
Sbjct: 261 ARRVFDEMDVRDSV-SYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRAC 317
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+ LS ++ LK G + N L+ YA CG + AR VF+ M + V+W+
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWN 377
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
S+I+ Y+ S EA+ +F+ M + E+ + +T + L+S +++ ++ G+ +HS ++
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS 437
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ + + + AL +MYAKCG + +L +F+SM + ++ +ISA G + +
Sbjct: 438 GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVT 497
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
TQM + PD +F V L C+ + GK ++R + + ++ ++++ ++
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSK 556
Query: 349 AGLIQEAYDIIKNM 362
G ++ + + + M
Sbjct: 557 CGCLENSSRVFERM 570
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 116/220 (52%), Gaps = 1/220 (0%)
Query: 102 PFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA- 160
PF +A + S+L+ H+L + GL S + L+ Y+ + VF ++
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
+ V W+S+I A+ + EAL + ++R + P+ T S++ AC+ + + G+
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
++ I + + +G AL +MY++ GL+ +A VF+ MP ++L S+ +IS +HG
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
++ + ++ ++++ + PD + S +L A ++ +V +G+
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 212/379 (55%), Gaps = 13/379 (3%)
Query: 73 LANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSD 132
A + P SL F +++ L PD+ P A K+CA +S G H L++KTG +D
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 133 CYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRL 192
+ ++L+ YA CG I +AR++FDEM R VVTWS M+ Y EAL +F+E
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 193 ANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKK 252
N N + S++S C+ + G IH ++ D S +G++L +Y+KCG+ +
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 253 ALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSH 312
A VFN +P KNL + M+ A H + VI LF +M+ G+KP+ ++F +L+ACSH
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 313 MGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILR 372
GLVDEG+ YFD+M + I+P+ +HY +VD+L RAG +QEA ++I NMP++P +
Sbjct: 331 AGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 373 SFLGAC---RNQGSVPSLDDKLMSKLESELG----ANYVLTANVFSTCASWKDASNLRLA 425
+ L +C +N DK+ ELG ++ +N ++ ++DA+ R
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVF-----ELGPVSSGMHISLSNAYAADGRFEDAAKARKL 444
Query: 426 MKQKGLKKNPGCSWLEVQN 444
++ +G KK G SW+E +N
Sbjct: 445 LRDRGEKKETGLSWVEERN 463
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 2/310 (0%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L + AR S G H +K+GLS N L+ FY+ +R+ F++ ++
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS 81
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
TWSS+I+ + + P +L ++M N +P+ L S +C+ + G S+H
Sbjct: 82 TTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCL 141
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ D V +G++L +MYAKCG + A +F+ MP++N+ +++ M+ G ++
Sbjct: 142 SMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEA 201
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
+ LF + L + SFS ++S C++ L++ G+ + + S +V
Sbjct: 202 LWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKSSFDSSSFVGSSLVS 260
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYV 404
L ++ G+ + AY + +P++ N I + L A + + S + N++
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFI 319
Query: 405 LTANVFSTCA 414
NV + C+
Sbjct: 320 TFLNVLNACS 329
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 212/399 (53%), Gaps = 5/399 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P L WN I P E++ F +R P++ T+ L AC+
Sbjct: 162 ARKLFDEIP-ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
L+ G H L L++G +D N L+ FY C I + +F EM + V+W S
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCS 280
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
++AAYV ++ +A ++ R + + + S+LSAC+ M + G SIH++ +
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
V+ ++ +G+AL +MY KCG ++ + F+ MPEKNL + +I + G ++LF
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 290 QMEDMGL--KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+M G P+ ++F +LSACS G V+ G FD M Y I+P EHY C+VD+L
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG 460
Query: 348 RAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG--SVPSLDDKLMSKLESELGANYVL 405
RAG+++ AY+ IK MP++P + + ACR G + L + + KL+ + N+VL
Sbjct: 461 RAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVL 520
Query: 406 TANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+N F+ W +A+ +R +K G+KK G SW+ V+N
Sbjct: 521 LSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKN 559
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 12/358 (3%)
Query: 32 PYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR 91
P+L + + S + P + L + +W ++I LA + +LV F ++R
Sbjct: 42 PFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR 101
Query: 92 SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
G+ P++FT+P A KA A + G H+L +K G D + + Y
Sbjct: 102 EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDD 161
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
AR++FDE+ R + TW++ I+ V P EA+ F E R + PNS+T + L+ACS
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
++++ G +H + R+ D V + L + Y KC ++ + ++F M KN S+ +
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 272 ISA-LGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMY 330
++A + NH +K + +D+ ++ S +LSAC+ M ++ G R + +
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDI-VETSDFMISSVLSACAGMAGLELG-----RSIHAH 335
Query: 331 NIKPSVEHY----GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
+K VE +VD+ + G I+++ MP E N V S +G +QG V
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQV 392
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 222/395 (56%), Gaps = 6/395 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ F + AWNT+++ ++ + FR++Q G+ D+ + +
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVIS 441
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
+C+ + ++ G H +KT L N+L+ Y G + A ++F E A V+T
Sbjct: 442 SCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVIT 500
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W++MIA+YV +A+ +F M N KP+S+TLV+LL AC ++ G+ IH YIT
Sbjct: 501 WNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYIT 560
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+M++ L AL +MYAKCG ++K+ +F++ +K+ + +MIS G HG + I+
Sbjct: 561 ETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIA 620
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF QME+ +KP G +F +LSAC+H GLV++GK F +M Y++KP+++HY C+VDLL
Sbjct: 621 LFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLL 679
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP---SLDDKLMSKLESELGANY 403
+R+G ++EA + +MP P+ VI + L +C G + ++ ++ + + Y
Sbjct: 680 SRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVAS-DPQNDGYY 738
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCS 438
++ AN++S W++A R M++ G+ K G S
Sbjct: 739 IMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 4/302 (1%)
Query: 31 NPYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQ 90
N ++ S+ + S ++ P S L +F WN+II+A ++ SL FF +
Sbjct: 58 NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML 117
Query: 91 RSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLK-TGLSSDCYTDNTLLKFYADCGAI 149
SG SPD+FT P + ACA + G H L LK G + + + FY+ CG +
Sbjct: 118 LSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFL 177
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN---EKPNSVTLVSLL 206
A VFDEM R VV W+++I+ +V + L +M A +KPN TL
Sbjct: 178 QDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGF 237
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
ACS + + G +H + +N + S + +++F Y+K G +A L F + ++++
Sbjct: 238 QACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMF 297
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
S+T +I++L G ++ +F +M++ G+ PDG+ S +++ M LV +GK + +
Sbjct: 298 SWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 327 VR 328
+R
Sbjct: 358 IR 359
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 187/417 (44%), Gaps = 44/417 (10%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS---PDNFTYPFALKACAR 110
F+ +P + AW II + L + ++ +G P+ T +AC+
Sbjct: 184 FDEMP-DRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 111 VSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSM 170
+ +L G H +K GL+S + +++ FY+ G A F E+ + +W+S+
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 171 IAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
IA+ S E+ +F EM+ P+ V + L++ KM+ V G++ H ++ R+
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEK-NLQSFTIMISALGNHGCQKDVISLFT 289
+ + +L MY K L+ A +F + E+ N +++ M+ G C I LF
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR------MYNIKPSVEHYGCMV 343
+++++G++ D S + ++S+CSH+G V GK +V+ + + ++ YG M
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMG 482
Query: 344 DLLARAGLIQEA--------------------------YDIIKNMPMEPNAVILRSFLGA 377
DL + EA +D + + +P+++ L + L A
Sbjct: 483 DLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMA 542
Query: 378 CRNQGSVP--SLDDKLMSKLESELGANYVLTA---NVFSTCASWKDASNLRLAMKQK 429
C N GS+ + + +++ E E+ N L+A ++++ C + + L A QK
Sbjct: 543 CVNTGSLERGQMIHRYITETEHEM--NLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 171/376 (45%), Gaps = 7/376 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+F+W +II +LA S ES F +Q G+ PD + ++ + G FH
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHG 355
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-TVVTWSSMIAAYVGSNSPS 181
++ S D N+LL Y + A ++F ++ W++M+ Y
Sbjct: 356 FVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHV 415
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
+ + +F++++ + +S + S++S+CS + V G+S+H Y+ + +D+++ + +L
Sbjct: 416 KCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLI 475
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
++Y K G + A +F + N+ ++ MI++ + + I+LF +M KP +
Sbjct: 476 DLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSI 534
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
+ +L AC + G ++ G+M R + + ++ ++D+ A+ G ++++ ++ +
Sbjct: 535 TLVTLLMACVNTGSLERGQM-IHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELF-D 592
Query: 362 MPMEPNAVILRSFLGACRNQGSVPS---LDDKLMSKLESELGANYVLTANVFSTCASWKD 418
+ +AV + G V S L D++ G ++ + + +
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ 652
Query: 419 ASNLRLAMKQKGLKKN 434
L L M Q +K N
Sbjct: 653 GKKLFLKMHQYDVKPN 668
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 137/287 (47%), Gaps = 37/287 (12%)
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
+L + GLS + + + L+ YA G + +VF + R + W+S+I A+ + +
Sbjct: 48 ALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYA 107
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN-HVDMSVELGTAL 240
+L F M L+ + P+ T ++SAC++++ G +H + ++ D + +G +
Sbjct: 108 RSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASF 167
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL---K 297
Y+KCG ++ A LVF+ MP++++ ++T +IS +G + + +M G K
Sbjct: 168 VYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDK 227
Query: 298 PDGLSFSVILSACSHMGLVDEGKMYFDRMVR------------MYNI-----KPSVEH-- 338
P+ + ACS++G + EG+ V+ M++ PS +
Sbjct: 228 PNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 339 -----------YGCMVDLLARAGLIQEAYDI---IKNMPMEPNAVIL 371
+ ++ LAR+G ++E++D+ ++N M P+ V++
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVI 334
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 220/388 (56%), Gaps = 10/388 (2%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +WNT+I A + E L+ +Q+ G D T L A + + + G H+
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE--MAVRTVVTWSSMIAAYVGSNSP 180
++ G+ + ++ L+ Y+ G I ++++F+ A R TW+SMI+ Y +
Sbjct: 444 FLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+ VF++M N +PN+VT+ S+L ACS++ +V G+ +H + R ++D +V + +AL
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASAL 562
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+MY+K G +K A +F+ E+N ++T MI G HG + ISLF M++ G+KPD
Sbjct: 563 VDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDA 622
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++F +LSACS+ GL+DEG F+ M +YNI+PS EHY C+ D+L R G + EAY+ +K
Sbjct: 623 ITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 361 NMPMEPN-AVILRSFLGACRNQGSVPSLDDKLMSKLES-ELGANY----VLTANVFSTCA 414
+ E N A + S LG+C+ G + L + + +L + G N+ VL +N+++
Sbjct: 683 GLGEEGNIAELWGSLLGSCKLHGEL-ELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQ 741
Query: 415 SWKDASNLRLAMKQKGLKKNPGCSWLEV 442
WK +R M++KGLKK G S +E+
Sbjct: 742 KWKSVDKVRRGMREKGLKKEVGRSGIEI 769
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 168/352 (47%), Gaps = 6/352 (1%)
Query: 66 WNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
WNT+I + +ES+ +F + + D TY A A + + + G FH
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
K N+L+ Y+ CG++ + VF M R VV+W++MI+A+V + E L
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
+ EM+ K + +T+ +LLSA S + N G+ H+++ R + + + L +MY
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMY 463
Query: 245 AKCGLMKKALLVF--NSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
+K GL++ + +F + E++ ++ MIS +G + +F +M + ++P+ ++
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+ IL ACS +G VD GK +R Y + +V +VD+ ++AG I+ A D+
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 363 PMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCA 414
E N+V + + G +S ES + + + V S C+
Sbjct: 583 K-ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACS 633
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 32/392 (8%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG--LSPDNFTYPFALK 106
A+ F+++P P WNTII + P E+L+F+ R++++ + D +TY LK
Sbjct: 57 LARQLFDAIP-KPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLK 115
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYA------DCGAIGFARQVFDEMA 160
ACA +L G H ++ +S N+L+ Y DC R+VFD M
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMR 175
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
+ VV W+++I+ YV + +EA F M KP+ V+ V++ A S ++
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 221 IHSYITRNHVDMSVEL--GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNH 278
+ + + + +L ++ MYA+ G ++ + VF+S E+N++ + MI +
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 279 GCQKDVISLFTQMEDMGLKP---DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
C + I LF +E +G K D +++ + SA S + V+ G+ + + + + P
Sbjct: 296 DCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDK---LM 392
V MV + +R G + +++ + +M E + V + + A G LDD+ L+
Sbjct: 354 VIVNSLMV-MYSRCGSVHKSFGVFLSM-RERDVVSWNTMISAFVQNG----LDDEGLMLV 407
Query: 393 SKLESE-LGANYVLTANVFSTCASWKDASNLR 423
+++ + +Y+ + S ASNLR
Sbjct: 408 YEMQKQGFKIDYITVTALLSA------ASNLR 433
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 225/409 (55%), Gaps = 16/409 (3%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL------QRSGLSPDNFT 100
L A+ F+ +P + +W ++IR + L+++ F+ L + D+
Sbjct: 127 LEDARKVFDEIP-KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMG 185
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG--AIGFARQVFDE 158
+ AC+RV + HS +K G NTLL YA G + AR++FD+
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ 245
Query: 159 MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKP---NSVTLVSLLSACSKMVNV 215
+ + V+++S+++ Y S +EA VF+ RL K N++TL ++L A S +
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFEVFR--RLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
G+ IH + R ++ V +GT++ +MY KCG ++ A F+ M KN++S+T MI+
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 276 GNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
G HG + LF M D G++P+ ++F +L+ACSH GL EG +F+ M + ++P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMS 393
+EHYGCMVDLL RAG +Q+AYD+I+ M M+P+++I S L ACR +V + +
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLF 483
Query: 394 KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+L+S Y+L +++++ WKD +R+ MK +GL K PG S LE+
Sbjct: 484 ELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLEL 532
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 190/376 (50%), Gaps = 19/376 (5%)
Query: 52 SFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARV 111
+ FN +F+WN++I LA S E+L+ F +++ L P ++P A+KAC+ +
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 112 SSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMI 171
+ G H G SD + + L+ Y+ CG + AR+VFDE+ R +V+W+SMI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 172 AAYVGSNSPSEALHVFQEMRLANEKP-------NSVTLVSLLSACSKMVNVSAGESIHSY 224
Y + + +A+ +F+++ L +E +S+ LVS++SACS++ ESIHS+
Sbjct: 150 RGYDLNGNALDAVSLFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 225 ITRNHVDMSVELGTALFEMYAKCGL--MKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
+ + D V +G L + YAK G + A +F+ + +K+ S+ ++S G
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 283 DVISLFTQM-EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC 341
+ +F ++ ++ + + ++ S +L A SH G + GK D+++RM ++ V
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGTS 327
Query: 342 MVDLLARAGLIQ---EAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE 398
++D+ + G ++ +A+D +KN N + + G + + ++S
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSG 383
Query: 399 LGANYVLTANVFSTCA 414
+ NY+ +V + C+
Sbjct: 384 VRPNYITFVSVLAACS 399
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 213/383 (55%), Gaps = 5/383 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L W +I ++ + E+L F++++ + P+ T L C + +L G H
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L++K G+ D N L+ YA C A+ VF+ + + +V W+S+I+ + + S E
Sbjct: 368 LSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH--VDMSVELGTAL 240
AL +F M + PN VT+ SL SAC+ + +++ G S+H+Y + SV +GTAL
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+ YAKCG + A L+F+++ EKN +++ MI G G + LF +M KP+
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNE 546
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
+F+ ILSAC H G+V+EGK YF M + YN PS +HY CMVD+LARAG +++A DII+
Sbjct: 547 STFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606
Query: 361 NMPMEPNAVILRSFLGAC--RNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKD 418
MP++P+ +FL C ++ + + K M L + + YVL +N++++ W
Sbjct: 607 KMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQ 666
Query: 419 ASNLRLAMKQKGLKKNPGCSWLE 441
A +R MKQ+GL K G S +E
Sbjct: 667 AKEVRNLMKQRGLSKIAGHSTME 689
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 13/370 (3%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P P + W ++R + +E + + L + G D+ + ALKAC
Sbjct: 95 ARLVFDQIP-EPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACT 153
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ L +G H +K S D LL YA CG I A +VF+++ +R VV W+S
Sbjct: 154 ELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTS 212
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MIA YV ++ E L +F MR N N T +L+ AC+K+ + G+ H + ++
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+++S L T+L +MY KCG + A VFN +L +T MI ++G + +SLF
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY---GCMVDLL 346
+M+ + +KP+ ++ + +LS C GL++ + R V +IK + +V +
Sbjct: 333 KMKGVEIKPNCVTIASVLSGC---GLIE--NLELGRSVHGLSIKVGIWDTNVANALVHMY 387
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE-LGANYVL 405
A+ ++A + + M E + V S + GS+ L ++ SE + N V
Sbjct: 388 AKCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGSIHEA-LFLFHRMNSESVTPNGVT 445
Query: 406 TANVFSTCAS 415
A++FS CAS
Sbjct: 446 VASLFSACAS 455
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 142/337 (42%), Gaps = 19/337 (5%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L C + SL H + GL D L+ Y G AR VFD++
Sbjct: 51 LSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
W M+ Y + E + ++ + + + + L AC+++ ++ G+ IH
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA-LGNHGCQKD 283
+ + +V L T L +MYAKCG +K A VFN + +N+ +T MI+ + N C++
Sbjct: 168 LVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMV 343
++ LF +M + + + ++ ++ AC+ + + +GK + +V K +E C+V
Sbjct: 227 LV-LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV-----KSGIELSSCLV 280
Query: 344 ----DLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESEL 399
D+ + G I A + N + V+ + + + GSV E+
Sbjct: 281 TSLLDMYVKCGDISNARRVF-NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 400 GANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPG 436
N V A+V S C NL L GL G
Sbjct: 340 KPNCVTIASVLSGCGL---IENLELGRSVHGLSIKVG 373
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 188 QEMRLANEKPNSVTLVSLLSAC----SKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
+E+ L E S + S C SK N+ + H +T N + + + T L +
Sbjct: 26 KELILTEENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSL 85
Query: 244 YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSF 303
Y G K A LVF+ +PE + + +M+ + +V+ L+ + G + D + F
Sbjct: 86 YGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVF 145
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY--GCMVDLLARAGLIQEAYDIIKN 361
S L AC+ + +D GK ++V++ PS ++ ++D+ A+ G I+ A+ + +
Sbjct: 146 SKALKACTELQDLDNGKKIHCQLVKV----PSFDNVVLTGLLDMYAKCGEIKSAHKVFND 201
Query: 362 MPMEPNAVILRSFLGA 377
+ + N V S +
Sbjct: 202 ITLR-NVVCWTSMIAG 216
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 239/471 (50%), Gaps = 71/471 (15%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY 101
AS + A+ F+ +P + N +IR+ N+ E + F + + PD++T+
Sbjct: 85 ASLKDVASARKVFDEIP-ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTF 143
Query: 102 PFALKACARVSSLS-----HG-----GVFHSLTLKTGLSS-------------------- 131
P LKAC+ ++ HG G+ +L + GL S
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 132 -DCYTDNTLLKFYA----------------------DCGAIG---------------FAR 153
D + N+L+ YA D G + + +
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK 263
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
+F +M +++V+W+ MI Y+ + P EA+ ++ M +P++V++ S+L AC
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 214 NVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMIS 273
+S G+ IH YI R + ++ L AL +MYAKCG ++KA VF +M +++ S+T MIS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 274 ALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIK 333
A G G D ++LF++++D GL PD ++F L+ACSH GL++EG+ F M Y I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 334 PSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKL 391
P +EH CMVDLL RAG ++EAY I++M MEPN + + LGACR + + L
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 392 MSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+ +L E YVL +N+++ W++ +N+R MK KGLKKNPG S +EV
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEV 554
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 142/300 (47%), Gaps = 11/300 (3%)
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPN 198
L++ YA + AR+VFDE+ R V+ + MI +YV + E + VF M N +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
T +L ACS + G IH T+ + ++ +G L MY KCG + +A LV +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 259 SMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDE 318
M +++ S+ ++ + D + + +ME + + D + + +L A S+ E
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTE 257
Query: 319 GKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSFL 375
MY M K S+ + M+ + + + EA ++ M EP+AV + S L
Sbjct: 258 NVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 376 GACRNQGSVPSLDDKLMSKLE-SELGANYVLT---ANVFSTCASWKDASNLRLAMKQKGL 431
AC + ++ SL K+ +E +L N +L ++++ C + A ++ MK + +
Sbjct: 317 PACGDTSAL-SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
++HS I + + LG L YA + A VF+ +PE+N+ +MI + N+G
Sbjct: 60 TVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNG 119
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
+ + +F M ++PD +F +L ACS G + G+ ++ + ++
Sbjct: 120 FYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFVG 178
Query: 340 GCMVDLLARAGLIQEAYDIIKNM 362
+V + + G + EA ++ M
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEM 201
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 215/403 (53%), Gaps = 9/403 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A S F + +WN++I A ++L ++ + G D FT L A
Sbjct: 192 AVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT 251
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF---ARQVFDEMAVRTVVT 166
+ L G FH +K G + + + L+ FY+ CG + +VF E+ +V
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 167 WSSMIAAY-VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
W++MI+ Y + EA+ F++M+ +P+ + V + SACS + + S + IH
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 226 TRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
++H+ + + + AL +Y K G ++ A VF+ MPE N SF MI HG +
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
+ L+ +M D G+ P+ ++F +LSAC+H G VDEG+ YF+ M + I+P EHY CM+D
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMID 491
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKL---ESELGA 401
LL RAG ++EA I MP +P +V + LGACR ++ +L ++ ++L +
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNM-ALAERAANELMVMQPLAAT 550
Query: 402 NYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
YV+ AN+++ W++ +++R +M+ K ++K PGCSW+EV+
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKK 593
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 170/379 (44%), Gaps = 11/379 (2%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY 101
A + A+ F+ +P P ++NT+I A++ ++V F+R+++ G D FT
Sbjct: 85 AKDSKIHIARQLFDEIP-QPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 102 PFALKACA-RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM- 159
+ AC RV + H ++ G S +N + +Y+ G + A VF M
Sbjct: 144 SGLIAACCDRVDLIKQ---LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
+R V+W+SMI AY ++AL +++EM K + TL S+L+A + + ++ G
Sbjct: 201 ELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGR 260
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCG---LMKKALLVFNSMPEKNLQSFTIMISALG 276
H + + + +G+ L + Y+KCG M + VF + +L + MIS
Sbjct: 261 QFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYS 320
Query: 277 -NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
N ++ + F QM+ +G +PD SF + SACS++ + K ++ +
Sbjct: 321 MNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNR 380
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKL 395
+ ++ L ++G +Q+A + MP E NAV + G L
Sbjct: 381 ISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALLLYQRML 439
Query: 396 ESELGANYVLTANVFSTCA 414
+S + N + V S CA
Sbjct: 440 DSGIAPNKITFVAVLSACA 458
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 114/228 (50%), Gaps = 6/228 (2%)
Query: 132 DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR 191
+ ++ N ++K YA I ARQ+FDE+ V+++++I+ Y + A+ +F+ MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 192 LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK 251
+ + TL L++AC V++ + +H + D + A Y+K GL++
Sbjct: 133 KLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 252 KALLVFNSMPE-KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
+A+ VF M E ++ S+ MI A G H ++L+ +M G K D + + +L+A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNAL 250
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC-MVDLLARAGLIQEAYD 357
+ + + G+ + ++++ + S H G ++D ++ G YD
Sbjct: 251 TSLDHLIGGRQFHGKLIKAGFHQNS--HVGSGLIDFYSKCGGCDGMYD 296
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 210/382 (54%), Gaps = 3/382 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L +W T+I A + +E+L FR + + + D L+A + + S+ H
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L+ GL D N L+ Y C +G+A +VF+ + + VV+W+SMI++ + + SE
Sbjct: 512 HILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
A+ +F+ M +SV L+ +LSA + + ++ G IH Y+ R + + A+ +
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MYA CG ++ A VF+ + K L +T MI+A G HGC K + LF +M + PD +S
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F +L ACSH GL+DEG+ + M Y ++P EHY C+VD+L RA + EA++ +K M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
Query: 363 PMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDAS 420
EP A + + L ACR ++ + + + + +LE + N VL +NVF+ W D
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810
Query: 421 NLRLAMKQKGLKKNPGCSWLEV 442
+R MK G++K+PGCSW+E+
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEM 832
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 144/285 (50%), Gaps = 3/285 (1%)
Query: 30 HNPYLISQFLLS--ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFR 87
H+ I L+S A L A+ F+ WN+I+ + + S LE+L FR
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 88 RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGL-SSDCYTDNTLLKFYADC 146
+ +G +P+++T AL AC S G H+ LK+ SS+ Y N L+ Y C
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G + A ++ +M VVTW+S+I YV + EAL F +M A K + V++ S++
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
+A ++ N+ AG +H+Y+ ++ D ++++G L +MY+KC L F M +K+L
Sbjct: 394 AASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLI 453
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS 311
S+T +I+ + C + + LF + ++ D + IL A S
Sbjct: 454 SWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 134/266 (50%), Gaps = 3/266 (1%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
SL A+ F+ +P FAWNT+I A ++ P +L + ++ G+ ++P L
Sbjct: 131 SLDDAEKVFDEMP-DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-TV 164
KACA++ + G HSL +K G S + N L+ YA + AR++FD +
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
V W+S++++Y S E L +F+EM + PNS T+VS L+AC G+ IH+
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 309
Query: 225 ITRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
+ ++ S + + AL MY +CG M +A + M ++ ++ +I + K+
Sbjct: 310 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 369
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSA 309
+ F+ M G K D +S + I++A
Sbjct: 370 ALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 169/353 (47%), Gaps = 34/353 (9%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ WN++I+ + E+L FF + +G D + + A R+S+L G H+
Sbjct: 351 VVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHA 410
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+K G S+ NTL+ Y+ C + + F M + +++W+++IA Y ++ E
Sbjct: 411 YVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVE 470
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
AL +F+++ + + + L S+L A S + ++ + IH +I R + + + L +
Sbjct: 471 ALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVD 529
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
+Y KC M A VF S+ K++ S+T MIS+ +G + + + LF +M + GL D ++
Sbjct: 530 VYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVA 589
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPS-----VEHYGCMVDL---------LA 347
ILSA + + +++G+ ++R + ++ S V+ Y C DL +
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 348 RAGLIQ------------------EAYDIIKNMPMEPNAVILRSFLGACRNQG 382
R GL+Q E +D +++ + P+ + + L AC + G
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAG 702
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 158/347 (45%), Gaps = 22/347 (6%)
Query: 31 NPYLISQFLLSASTISLPFAKSFFNSLPITP-----PLFAWNTIIRALANSPTPLESL-- 83
N L+S + SAS IS P + S+P P P N ++ P+P +
Sbjct: 7 NMRLLSNMMYSASAISFPRVR-LHCSIPTEPSCRRNPFRQSNQPVQV----PSPKLACFD 61
Query: 84 -VFFRRLQRSGLSPDNF---TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDC-YTDNT 138
V QR +S +N + + L+ C + ++S G HS KT S + +
Sbjct: 62 GVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK 121
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPN 198
L+ Y CG++ A +VFDEM RT W++MI AYV + P+ AL ++ MR+
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
+ +LL AC+K+ ++ +G +HS + + + + AL MYAK + A +F+
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 259 SMPEK-NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVD 317
EK + + ++S+ G + + LF +M G P+ + L+AC
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 318 EGKMYFDRMVRMYNIKPSVEHYGC--MVDLLARAGLIQEAYDIIKNM 362
GK +++ + S E Y C ++ + R G + +A I++ M
Sbjct: 302 LGKEIHASVLK--SSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 217/422 (51%), Gaps = 42/422 (9%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +WN++I + +E+L F+ + S + PD T + ACA +S++ G H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 123 LTLKTG-LSSDCYTDNTLLKFYADCGAIGFARQVFD------------------------ 157
+K L +D N + YA C I AR +FD
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 158 -------EMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACS 210
+MA R VV+W+++IA Y + EAL +F ++ + P + ++L AC+
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 211 KMVNVSAGESIHSYITRNHVDMS------VELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
+ + G H ++ ++ + +G +L +MY KCG +++ LVF M E++
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFD 324
S+ MI +G + + LF +M + G KPD ++ +LSAC H G V+EG+ YF
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 325 RMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC---RNQ 381
M R + + P +HY CMVDLL RAG ++EA +I+ MPM+P++VI S L AC RN
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 382 GSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
+ +KL+ ++E YVL +N+++ W+D N+R +M+++G+ K PGCSW++
Sbjct: 578 TLGKYVAEKLL-EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIK 636
Query: 442 VQ 443
+Q
Sbjct: 637 IQ 638
Score = 158 bits (399), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 187/405 (46%), Gaps = 39/405 (9%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A S F S+P WN+++ A E+L +F + + G + +++ L
Sbjct: 102 LDEADSLFRSMPERDQC-TWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLS 160
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
AC+ ++ ++ G HSL K+ SD Y + L+ Y+ CG + A++VFDEM R VV+
Sbjct: 161 ACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVS 220
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+S+I + + EAL VFQ M + +P+ VTL S++SAC+ + + G+ +H +
Sbjct: 221 WNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVV 280
Query: 227 RN-HVDMSVELGTALFEMYAKCGLMKKALLVFNSMP------------------------ 261
+N + + L A +MYAKC +K+A +F+SMP
Sbjct: 281 KNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAAR 340
Query: 262 -------EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
E+N+ S+ +I+ +G ++ +SLF ++ + P SF+ IL AC+ +
Sbjct: 341 LMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLA 400
Query: 315 LVDEG-KMYFDRMVRMYNIKPSVEHY----GCMVDLLARAGLIQEAYDIIKNMPMEPNAV 369
+ G + + + + + E ++D+ + G ++E Y + + M ME + V
Sbjct: 401 ELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCV 459
Query: 370 ILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCA 414
+ + G + LES +++ V S C
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 147/298 (49%), Gaps = 36/298 (12%)
Query: 102 PFA--LKACARVSSLS--HGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD 157
PFA L +C + S LS + H+ +K+G S++ + N L+ Y+ CG++ RQVFD
Sbjct: 21 PFAKLLDSCIK-SKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFD 79
Query: 158 EMAVRTV-------------------------------VTWSSMIAAYVGSNSPSEALHV 186
+M R + TW+SM++ + + EAL
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 187 FQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAK 246
F M N + S+LSACS + +++ G +HS I ++ V +G+AL +MY+K
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 247 CGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVI 306
CG + A VF+ M ++N+ S+ +I+ +G + + +F M + ++PD ++ + +
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 307 LSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM 364
+SAC+ + + G+ R+V+ ++ + VD+ A+ I+EA I +MP+
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
L+ A SK ++ G + + + ++ + T L K G + +A +F SMPE++
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL----TKLGFLDEADSLFRSMPERD 116
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFD 324
++ M+S H ++ + F M G + SF+ +LSACS + +++G +
Sbjct: 117 QCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG-VQVH 175
Query: 325 RMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
++ V +VD+ ++ G + +A + M + N V S + G
Sbjct: 176 SLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPA 234
Query: 385 PSLDDKLMSKLESELGANYVLTANVFSTCAS 415
D LES + + V A+V S CAS
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACAS 265
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 214/395 (54%), Gaps = 3/395 (0%)
Query: 50 AKSFFNSLPITPPL-FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC 108
A+ F P + L +N +I + ++ FRR++ +G+S D+ T + C
Sbjct: 107 ARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC 166
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
L G H +K GL S+ N+ + Y CG++ R++FDEM V+ ++TW+
Sbjct: 167 TVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWN 226
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
++I+ Y + + L ++++M+ + P+ TLVS+LS+C+ + G + + N
Sbjct: 227 AVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN 286
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+V + A MYA+CG + KA VF+ MP K+L S+T MI G HG + + LF
Sbjct: 287 GFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLF 346
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M G++PDG F ++LSACSH GL D+G F M R Y ++P EHY C+VDLL R
Sbjct: 347 DDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGR 406
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG--ANYVLT 406
AG + EA + I++MP+EP+ + + LGAC+ +V + +E E YVL
Sbjct: 407 AGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLM 466
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
+N++S + + +R+ M+++ +K PG S++E
Sbjct: 467 SNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 155/302 (51%), Gaps = 3/302 (0%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
WN +R LA ES+ +R + RSG SPD F++PF LK+CA +S G H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE--MAVRTVVTWSSMIAAYVGSNSPSEA 183
K G ++ + L+ Y CG + AR+VF+E + + V ++++I+ Y ++ ++A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
++F+ M+ +SVT++ L+ C+ + G S+H + +D V + + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 244 YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSF 303
Y KCG ++ +F+ MP K L ++ +IS +G DV+ L+ QM+ G+ PD +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
+LS+C+H+G G ++V P+V + + AR G + +A + MP
Sbjct: 261 VSVLSSCAHLGAKKIGH-EVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 364 ME 365
++
Sbjct: 320 VK 321
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 204/383 (53%), Gaps = 4/383 (1%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+W T+I ++L FR++ G+ D A+ ACA + +L G H+
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA 617
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
+G SSD N L+ Y+ CG I + F++ + W+++++ + S + EAL
Sbjct: 618 CVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEAL 677
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
VF M N+ T S + A S+ N+ G+ +H+ IT+ D E+ AL MY
Sbjct: 678 RVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMY 737
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
AKCG + A F + KN S+ +I+A HG + + F QM ++P+ ++
Sbjct: 738 AKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLV 797
Query: 305 VILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM 364
+LSACSH+GLVD+G YF+ M Y + P EHY C+VD+L RAGL+ A + I+ MP+
Sbjct: 798 GVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 365 EPNAVILRSFLGAC--RNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNL 422
+P+A++ R+ L AC + + +LE E A YVL +N+++ W DA +L
Sbjct: 858 KPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW-DARDL 916
Query: 423 -RLAMKQKGLKKNPGCSWLEVQN 444
R MK+KG+KK PG SW+EV+N
Sbjct: 917 TRQKMKEKGVKKEPGQSWIEVKN 939
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 142/291 (48%), Gaps = 1/291 (0%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
+NT+I L+ +++ F+R+ GL PD+ T + AC+ +L G H+ T
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
K G +S+ + LL YA C I A F E V VV W+ M+ AY + +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
+F++M++ PN T S+L C ++ ++ GE IHS I + + ++ + + L +MYA
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA 536
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
K G + A + K++ S+T MI+ + ++ F QM D G++ D + +
Sbjct: 537 KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTN 596
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAY 356
+SAC+ + + EG+ + + + +V L +R G I+E+Y
Sbjct: 597 AVSACAGLQALKEGQQIHAQAC-VSGFSSDLPFQNALVTLYSRCGKIEESY 646
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ A+ F+ L + +W +I L+ + E++ F + G+ P + + L
Sbjct: 238 VDLARRVFDGLRLKDHS-SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
AC ++ SL G H L LK G SSD Y N L+ Y G + A +F M+ R VT
Sbjct: 297 ACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
++++I +A+ +F+ M L +P+S TL SL+ ACS + G+ +H+Y T
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+ + ++ AL +YAKC ++ AL F +N+ + +M+ A G ++
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
+F QM+ + P+ ++ IL C +G ++ G+ ++++ N + + ++D+
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMY 535
Query: 347 ARAGLIQEAYDII 359
A+ G + A+DI+
Sbjct: 536 AKLGKLDTAWDIL 548
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 151/349 (43%), Gaps = 2/349 (0%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
WN ++ A S FR++Q + P+ +TYP LK C R+ L G HS +
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
KT + Y + L+ YA G + A + A + VV+W++MIA Y N +AL
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
F++M + + V L + +SAC+ + + G+ IH+ + + AL +Y+
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYS 637
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
+CG ++++ L F + ++ ++S G ++ + +F +M G+ + +F
Sbjct: 638 RCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 697
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
+ A S + +GK + + E ++ + A+ G I +A + +
Sbjct: 698 AVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTK 756
Query: 366 PNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCA 414
N V + + A G D + S + N+V V S C+
Sbjct: 757 -NEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACS 804
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 37/332 (11%)
Query: 89 LQRSGLSPDNFTYPFALKACARVS-SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG 147
++ G+ P++ T + L+ C + + SL G HS LK GL S+ L FY G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 148 AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
+ A +VFDEM RT+ TW+ MI N E +F M N PN T +L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 208 AC-SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
AC V E IH+ I + S + L ++Y++ G + A VF+ + K+
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS 254
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG------- 319
S+ MIS L + C+ + I LF M +G+ P +FS +LSAC + ++ G
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Query: 320 -KMYF-------DRMVRMY----NIKPSVEH------------YGCMVDLLARAGLIQEA 355
K+ F + +V +Y N+ S EH Y +++ L++ G ++A
Sbjct: 315 LKLGFSSDTYVCNALVSLYFHLGNL-ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 356 YDIIKNM---PMEPNAVILRSFLGACRNQGSV 384
++ K M +EP++ L S + AC G++
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 155/327 (47%), Gaps = 8/327 (2%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F+ +P +F WN +I+ LA+ E F R+ ++P+ T+ L+AC R S
Sbjct: 143 FDEMP-ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGS 200
Query: 114 LSHGGV--FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMI 171
++ V H+ L GL N L+ Y+ G + AR+VFD + ++ +W +MI
Sbjct: 201 VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 172 AAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVD 231
+ + +EA+ +F +M + P S+LSAC K+ ++ GE +H + +
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 232 MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM 291
+ AL +Y G + A +F++M +++ ++ +I+ L G + + LF +M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPSVEHYGCMVDLLARAG 350
GL+PD + + ++ ACS G + G+ ++ + +E G +++L A+
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCA 438
Query: 351 LIQEAYDIIKNMPMEPNAVILRSFLGA 377
I+ A D +E N V+ L A
Sbjct: 439 DIETALDYFLETEVE-NVVLWNVMLVA 464
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 214/385 (55%), Gaps = 3/385 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSL-SHGGVFH 121
+ AWN +I A P ++L F+ ++ G+S + T L AC L G H
Sbjct: 411 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLH 470
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
+ + G SD + N+L+ YA CG + ++ +F+ + R ++TW++M+AA
Sbjct: 471 AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 530
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
E L + +MR + + LSA +K+ + G+ +H + + + A
Sbjct: 531 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 590
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+MY+KCG + + + + ++L S+ I+ISALG HG ++V + F +M +MG+KP +
Sbjct: 591 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 650
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
+F +L+ACSH GLVD+G Y+D + R + ++P++EH C++DLL R+G + EA I
Sbjct: 651 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 710
Query: 362 MPMEPNAVILRSFLGACRNQGSVPSLDDKL--MSKLESELGANYVLTANVFSTCASWKDA 419
MPM+PN ++ RS L +C+ G++ +SKLE E + YVL++N+F+T W+D
Sbjct: 711 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 770
Query: 420 SNLRLAMKQKGLKKNPGCSWLEVQN 444
N+R M K +KK CSW+++++
Sbjct: 771 ENVRKQMGFKNIKKKQACSWVKLKD 795
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 171/365 (46%), Gaps = 35/365 (9%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F +P T L +WN+++ + N L++L + SG S + T+ AL AC
Sbjct: 302 FKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
G + H L + +GL + N L+ Y G + +R+V +M R VV W+++I
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN-VSAGESIHSYITRNHVDM 232
Y P +AL FQ MR+ N +T+VS+LSAC + + G+ +H+YI +
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
+ +L MYAKCG + + +FN + +N+ ++ M++A +HG ++V+ L ++M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGK---------------MYFDRMVRMYN------ 331
G+ D SFS LSA + + +++EG+ F+ MY+
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600
Query: 332 -----IKPSVEH----YGCMVDLLARAGLIQE---AYDIIKNMPMEPNAVILRSFLGACR 379
+ PSV + ++ L R G +E + + M ++P V S L AC
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660
Query: 380 NQGSV 384
+ G V
Sbjct: 661 HGGLV 665
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 161/354 (45%), Gaps = 11/354 (3%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGV-FHSL 123
+WNT++ + LE + FFR++ G+ P +F + AC R S+ GV H
Sbjct: 8 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 67
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
K+GL SD Y +L Y G + +R+VF+EM R VV+W+S++ Y P E
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 127
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
+ +++ MR N ++ ++S+C + + S G I + ++ ++ + + +L M
Sbjct: 128 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 187
Query: 244 YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSF 303
G + A +F+ M E++ S+ + +A +G ++ +F+ M + + +
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 247
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR----AGLIQEAYDII 359
S +LS H VD K + R + +K + C+ + L R AG EA +
Sbjct: 248 STLLSVLGH---VDHQK--WGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVF 302
Query: 360 KNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTC 413
K MP + + + S + + N G L S + S NYV + + C
Sbjct: 303 KQMPTK-DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 169/372 (45%), Gaps = 19/372 (5%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
++ F +P + +W +++ ++ P E + ++ ++ G+ + + + +C
Sbjct: 96 SRKVFEEMP-DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG 154
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ S G +K+GL S +N+L+ G + +A +FD+M+ R ++W+S
Sbjct: 155 LLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 214
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+ AAY + E+ +F MR +++ NS T+ +LLS + + G IH + +
Sbjct: 215 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
D V + L MYA G +A LVF MP K+L S+ ++++ N G D + L
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV---RMYNIKPSVEHYGCMVDLL 346
M G + ++F+ L+AC ++G++ +V YN +V +
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMY 390
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD-DKLMSKLES----ELGA 401
+ G + E+ ++ MP + V + +G G D DK ++ ++ + +
Sbjct: 391 GKIGEMSESRRVLLQMP-RRDVVAWNALIG-----GYAEDEDPDKALAAFQTMRVEGVSS 444
Query: 402 NYVLTANVFSTC 413
NY+ +V S C
Sbjct: 445 NYITVVSVLSAC 456
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 38/317 (11%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L ++ FN L + WN ++ A A+ E L +++ G+S D F++ L
Sbjct: 498 LSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
A A+++ L G H L +K G D + N Y+ CG IG ++ R++ +
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 616
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+ +I+A E F EM KP VT VSLL+ACS V G + + I
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 676
Query: 227 RNH-VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
R+ ++ ++E + ++ + G + +A + MP
Sbjct: 677 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP------------------------ 712
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
+KP+ L + +L++C G +D G+ + + ++ SV Y ++
Sbjct: 713 ----------MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV--YVLSSNM 760
Query: 346 LARAGLIQEAYDIIKNM 362
A G ++ ++ K M
Sbjct: 761 FATTGRWEDVENVRKQM 777
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 112/228 (49%), Gaps = 5/228 (2%)
Query: 159 MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNV-SA 217
M VR V+W++M++ V E + F++M KP+S + SL++AC + ++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 218 GESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGN 277
G +H ++ ++ + V + TA+ +Y GL+ + VF MP++N+ S+T ++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 278 HGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPSV 336
G ++VI ++ M G+ + S S+++S+C + G+ ++V+ K +V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
E+ ++ +L G + A I M E + + S A G +
Sbjct: 181 EN--SLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHI 225
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 214/385 (55%), Gaps = 3/385 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSL-SHGGVFH 121
+ AWN +I A P ++L F+ ++ G+S + T L AC L G H
Sbjct: 428 VVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLH 487
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
+ + G SD + N+L+ YA CG + ++ +F+ + R ++TW++M+AA
Sbjct: 488 AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 547
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
E L + +MR + + LSA +K+ + G+ +H + + + A
Sbjct: 548 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 607
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+MY+KCG + + + + ++L S+ I+ISALG HG ++V + F +M +MG+KP +
Sbjct: 608 DMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHV 667
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
+F +L+ACSH GLVD+G Y+D + R + ++P++EH C++DLL R+G + EA I
Sbjct: 668 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 727
Query: 362 MPMEPNAVILRSFLGACRNQGSVPSLDDKL--MSKLESELGANYVLTANVFSTCASWKDA 419
MPM+PN ++ RS L +C+ G++ +SKLE E + YVL++N+F+T W+D
Sbjct: 728 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 787
Query: 420 SNLRLAMKQKGLKKNPGCSWLEVQN 444
N+R M K +KK CSW+++++
Sbjct: 788 ENVRKQMGFKNIKKKQACSWVKLKD 812
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 171/365 (46%), Gaps = 35/365 (9%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F +P T L +WN+++ + N L++L + SG S + T+ AL AC
Sbjct: 319 FKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
G + H L + +GL + N L+ Y G + +R+V +M R VV W+++I
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN-VSAGESIHSYITRNHVDM 232
Y P +AL FQ MR+ N +T+VS+LSAC + + G+ +H+YI +
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
+ +L MYAKCG + + +FN + +N+ ++ M++A +HG ++V+ L ++M
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGK---------------MYFDRMVRMYN------ 331
G+ D SFS LSA + + +++EG+ F+ MY+
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617
Query: 332 -----IKPSVEH----YGCMVDLLARAGLIQE---AYDIIKNMPMEPNAVILRSFLGACR 379
+ PSV + ++ L R G +E + + M ++P V S L AC
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677
Query: 380 NQGSV 384
+ G V
Sbjct: 678 HGGLV 682
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 12/369 (3%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P+ + +WNT++ + LE + FFR++ G+ P +F + AC
Sbjct: 11 ARHLFDIMPVRNEV-SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACG 69
Query: 110 RVSSLSHGGV-FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
R S+ GV H K+GL SD Y +L Y G + +R+VF+EM R VV+W+
Sbjct: 70 RSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWT 129
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
S++ Y P E + +++ MR N ++ ++S+C + + S G I + ++
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 189
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
++ + + +L M G + A +F+ M E++ S+ + +A +G ++ +F
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+ M + + + S +LS H VD K + R + +K + C+ + L R
Sbjct: 250 SLMRRFHDEVNSTTVSTLLSVLGH---VDHQK--WGRGIHGLVVKMGFDSVVCVCNTLLR 304
Query: 349 ----AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYV 404
AG EA + K MP + + + S + + N G L S + S NYV
Sbjct: 305 MYAGAGRSVEANLVFKQMPTK-DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 363
Query: 405 LTANVFSTC 413
+ + C
Sbjct: 364 TFTSALAAC 372
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 169/372 (45%), Gaps = 19/372 (5%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
++ F +P + +W +++ ++ P E + ++ ++ G+ + + + +C
Sbjct: 113 SRKVFEEMP-DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG 171
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ S G +K+GL S +N+L+ G + +A +FD+M+ R ++W+S
Sbjct: 172 LLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 231
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+ AAY + E+ +F MR +++ NS T+ +LLS + + G IH + +
Sbjct: 232 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
D V + L MYA G +A LVF MP K+L S+ ++++ N G D + L
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV---RMYNIKPSVEHYGCMVDLL 346
M G + ++F+ L+AC ++G++ +V YN +V +
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG----NALVSMY 407
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD-DKLMSKLES----ELGA 401
+ G + E+ ++ MP + V + +G G D DK ++ ++ + +
Sbjct: 408 GKIGEMSESRRVLLQMP-RRDVVAWNALIG-----GYAEDEDPDKALAAFQTMRVEGVSS 461
Query: 402 NYVLTANVFSTC 413
NY+ +V S C
Sbjct: 462 NYITVVSVLSAC 473
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 38/317 (11%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L ++ FN L + WN ++ A A+ E L +++ G+S D F++ L
Sbjct: 515 LSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
A A+++ L G H L +K G D + N Y+ CG IG ++ R++ +
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 633
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+ +I+A E F EM KP VT VSLL+ACS V G + + I
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Query: 227 RNH-VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
R+ ++ ++E + ++ + G + +A + MP
Sbjct: 694 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP------------------------ 729
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
+KP+ L + +L++C G +D G+ + + ++ SV Y ++
Sbjct: 730 ----------MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSV--YVLSSNM 777
Query: 346 LARAGLIQEAYDIIKNM 362
A G ++ ++ K M
Sbjct: 778 FATTGRWEDVENVRKQM 794
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 120/244 (49%), Gaps = 5/244 (2%)
Query: 143 YADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTL 202
Y G + AR +FD M VR V+W++M++ V E + F++M KP+S +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 203 VSLLSACSKMVNV-SAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP 261
SL++AC + ++ G +H ++ ++ + V + TA+ +Y GL+ + VF MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 262 EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKM 321
++N+ S+T ++ + G ++VI ++ M G+ + S S+++S+C + G+
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 322 YFDRMVRM-YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRN 380
++V+ K +VE+ ++ +L G + A I M E + + S A
Sbjct: 182 IIGQVVKSGLESKLAVEN--SLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQ 238
Query: 381 QGSV 384
G +
Sbjct: 239 NGHI 242
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 1/186 (0%)
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MY K G +K A +F+ MP +N S+ M+S + G + + F +M D+G+KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+ +++AC G + + V + V ++ L GL+ + + + M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 363 PMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNL 422
P + N V S + ++G + D +G N + V S+C KD S
Sbjct: 121 P-DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 423 RLAMKQ 428
R + Q
Sbjct: 180 RQIIGQ 185
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 214/415 (51%), Gaps = 36/415 (8%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L A+N +I N E+L RR+ SG+ D FTYP ++ACA L G H+
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHA 310
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L+ S + DN+L+ Y CG AR +F++M + +V+W+++++ YV S E
Sbjct: 311 YVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 183 ALHVFQEMRLANE-------------------------------KPNSVTLVSLLSACSK 211
A +F+EM+ N +P + +C+
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
+ G+ H+ + + D S+ G AL MYAKCG++++A VF +MP + S+ +
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN 331
I+ALG HG + + ++ +M G++PD ++ +L+ACSH GLVD+G+ YFD M +Y
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYR 549
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP---SLD 388
I P +HY ++DLL R+G +A +I+++P +P A I + L CR G++
Sbjct: 550 IPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAA 609
Query: 389 DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
DKL L E Y+L +N+ + W++ + +R M+ +G+KK CSW+E++
Sbjct: 610 DKLFG-LIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEME 663
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 179/438 (40%), Gaps = 72/438 (16%)
Query: 46 SLPFAKSFFNSLPIT-PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFA 104
+ A+ F P+ +N +I +++ ++ F +++ G PDNFT+
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 105 LKACARVSSLSHGGV-FHSLTLKTGLSSDCYTDNTLLKFYADCGA----IGFARQVFDEM 159
L A V+ V FH+ LK+G N L+ Y+ C + + AR+VFDE+
Sbjct: 155 LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 160 AVRTVVTWSS--------------------------------MIAAYVGSNSPSEALHVF 187
+ +W++ MI+ YV EAL +
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 188 QEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKC 247
+ M + + + T S++ AC+ + G+ +H+Y+ R D S +L +Y KC
Sbjct: 275 RRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKC 333
Query: 248 GLMKKALLVFNSMP-------------------------------EKNLQSFTIMISALG 276
G +A +F MP EKN+ S+ IMIS L
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
+G ++ + LF+ M+ G +P +FS + +C+ +G G+ Y +++++ S+
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKI-GFDSSL 452
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLE 396
++ + A+ G+++EA + + MP ++V + + A G D L+
Sbjct: 453 SAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Query: 397 SELGANYVLTANVFSTCA 414
+ + + V + C+
Sbjct: 512 KGIRPDRITLLTVLTACS 529
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 135/413 (32%), Positives = 232/413 (56%), Gaps = 7/413 (1%)
Query: 31 NPYLISQFLLSASTIS--LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
N L S+ +L+ S ++ P + S F +P +F+WN II + S +S+ F R
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRN-IFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 89 LQR-SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG 147
+ R S + PD+FT P L+AC+ G + H L LK G SS + + L+ Y D G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 148 AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
+ AR++FD+M VR V +++M YV L +F+EM + +SV +VSLL
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 208 ACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQS 267
AC ++ + G+S+H + R + + LG A+ +MY KC ++ A VF +M +++ S
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
++ +I G G LF +M G++P+ ++F +LSAC+H GLV++ +YF R++
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLM 362
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSL 387
+ YNI P ++HY + D ++RAGL++EA +++MP++P+ ++ + L C+ G+V
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 388 DD--KLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCS 438
+ + + +L+ + YV A ++S + +A +LR MK+K + K PGCS
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 217/419 (51%), Gaps = 37/419 (8%)
Query: 63 LFAWNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFH 121
+ WN++I L +L +F + L+ S LSPD FT L ACA + L G H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAI------------------GF------------ 151
S + TG N L+ Y+ CG + GF
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 152 ---ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
A+ +F + R VV W++MI Y S EA+++F+ M ++PNS TL ++LS
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP-EKNLQS 267
S + ++S G+ IH ++ SV + AL MYAK G + A F+ + E++ S
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
+T MI AL HG ++ + LF M GL+PD +++ + SAC+H GLV++G+ YFD M
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK 542
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP-- 385
+ I P++ HY CMVDL RAGL+QEA + I+ MP+EP+ V S L ACR ++
Sbjct: 543 DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG 602
Query: 386 SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ + + LE E Y AN++S C W++A+ +R +MK +KK G SW+EV++
Sbjct: 603 KVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKH 661
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 175/430 (40%), Gaps = 73/430 (16%)
Query: 52 SFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARV 111
FF+ LP + +W T+I N +++ + + G+ P FT L + A
Sbjct: 101 EFFDQLPQRDSV-SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAAT 159
Query: 112 SSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV------- 164
+ G HS +K GL + N+LL YA CG A+ VFD M VR +
Sbjct: 160 RCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219
Query: 165 ------------------------VTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNS 199
VTW+SMI+ + AL +F +M R + P+
Sbjct: 220 ALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR 279
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKC------------ 247
TL S+LSAC+ + + G+ IHS+I D+S + AL MY++C
Sbjct: 280 FTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQ 339
Query: 248 ---------------------GLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
G M +A +F S+ ++++ ++T MI HG + I+
Sbjct: 340 RGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAIN 399
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF M G +P+ + + +LS S + + GK V+ I SV ++ +
Sbjct: 400 LFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY-SVSVSNALITMY 458
Query: 347 ARAGLI---QEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANY 403
A+AG I A+D+I+ E + V S + A G + + L L ++
Sbjct: 459 AKAGNITSASRAFDLIR---CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 404 VLTANVFSTC 413
+ VFS C
Sbjct: 516 ITYVGVFSAC 525
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 136/314 (43%), Gaps = 37/314 (11%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
AK+ F SL + AW +I + E++ FR + G P+++T L +
Sbjct: 366 AKNIFVSLK-DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV-RTVVTWS 168
++SLSHG H +K+G N L+ YA G I A + FD + R V+W+
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
SMI A EAL +F+ M + +P+ +T V + SAC+ V+ G R
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG--------RQ 536
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ DM MK V +P L + M+ G G ++
Sbjct: 537 YFDM-----------------MKD---VDKIIP--TLSHYACMVDLFGRAGLLQEAQEF- 573
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+E M ++PD +++ +LSAC +D GK+ +R++ + Y + +L +
Sbjct: 574 --IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA--YSALANLYSA 629
Query: 349 AGLIQEAYDIIKNM 362
G +EA I K+M
Sbjct: 630 CGKWEEAAKIRKSM 643
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 135/324 (41%), Gaps = 71/324 (21%)
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV---------------- 164
H +K+GL Y N L+ Y+ G AR++FDEM +RT
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 165 ---------------VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
V+W++MI Y +A+ V +M +P TL ++L++
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASV 156
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG--LMKK--------------- 252
+ + G+ +HS+I + + +V + +L MYAKCG +M K
Sbjct: 157 AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWN 216
Query: 253 --------------ALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLK 297
A+ F M E+++ ++ MIS G + +F++M D L
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS 276
Query: 298 PDGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPSVEHYGCMVDLLARAGLIQEAY 356
PD + + +LSAC+++ + GK +V ++I V ++ + +R G ++ A
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVETAR 334
Query: 357 DII-----KNMPMEPNAVILRSFL 375
+I K++ +E +L ++
Sbjct: 335 RLIEQRGTKDLKIEGFTALLDGYI 358
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 220/409 (53%), Gaps = 21/409 (5%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL------QRSGLSPDNFT 100
L FA F +P P WN IIR A S P + ++R + + D T
Sbjct: 53 LSFAVQIFRYIP-KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALT 111
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA 160
F LKACAR S H + GLS+D TLL Y+ G + A ++FDEM
Sbjct: 112 CSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMP 171
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
VR V +W+++IA V N SEA+ +++ M + + VT+V+ L ACS + +V GE+
Sbjct: 172 VRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN 231
Query: 221 I-HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP-EKNLQSFTIMISALGNH 278
I H Y N V + A +MY+KCG + KA VF +K++ ++ MI+ H
Sbjct: 232 IFHGYSNDN-----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 279 GCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
G + +F ++ED G+KPD +S+ L+AC H GLV+ G F+ M ++ +++H
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKH 345
Query: 339 YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE 398
YGC+VDLL+RAG ++EA+DII +M M P+ V+ +S LGA V + + S+ E
Sbjct: 346 YGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAE--IASREIKE 403
Query: 399 LGAN----YVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+G N +VL +NV++ WKD +R M+ K +KK PG S++E +
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAK 452
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 113/235 (48%), Gaps = 11/235 (4%)
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM------RLANEKPNSV 200
G + FA Q+F + W+++I + GS+ PS A ++ M A + +++
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T L AC++ + SA + +H I R + L T L + Y+K G + A +F+ M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
P +++ S+ +I+ L + + + L+ +ME G++ ++ L ACSH+G V EG+
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE 230
Query: 321 MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
F Y+ +V +D+ ++ G + +AY + + + + V + +
Sbjct: 231 NIF----HGYS-NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMI 280
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 188/309 (60%), Gaps = 3/309 (0%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N +L Y G + A+++F EM R V+WS+MI + S +E+ F+E++ A
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
PN V+L +LSACS+ + G+ +H ++ + V + AL +MY++CG + A LV
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 257 FNSMPEKN-LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
F M EK + S+T MI+ L HG ++ + LF +M G+ PDG+SF +L ACSH GL
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
++EG+ YF M R+Y+I+P +EHYGCMVDL R+G +Q+AYD I MP+ P A++ R+ L
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 376 GACRNQGSVPSLDD--KLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKK 433
GAC + G++ + + +++L+ + VL +N ++T WKD +++R +M + +KK
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Query: 434 NPGCSWLEV 442
S +EV
Sbjct: 507 TTAWSLVEV 515
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 169/399 (42%), Gaps = 78/399 (19%)
Query: 29 DHNPYLISQFLLS-ASTIS--LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVF 85
D + Y + +L A +IS LP+A+ P P F +NT++R + S P S+
Sbjct: 34 DTDSYFTGKLILHCAISISDALPYARRLLLCFP-EPDAFMFNTLVRGYSESDEPHNSVAV 92
Query: 86 FRRLQRSGLS-PDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYA 144
F + R G PD+F++ F +KA SL G H LK GL S + TL+ Y
Sbjct: 93 FVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYG 152
Query: 145 DCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVS 204
CG + FAR+VFDEM +V W+++I A N + A +F +M
Sbjct: 153 GCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKM-------------- 198
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
+ RNH +V L Y K G ++ A +F+ MP ++
Sbjct: 199 --------------------LVRNHTSWNVMLAG-----YIKAGELESAKRIFSEMPHRD 233
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF- 323
S++ MI + ++G + F +++ G+ P+ +S + +LSACS G + GK+
Sbjct: 234 DVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG 293
Query: 324 --------------DRMVRMY----NI------------KPSVEHYGCMVDLLARAGLIQ 353
+ ++ MY N+ K + + M+ LA G +
Sbjct: 294 FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
Query: 354 EAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPSLDD 389
EA + M + P+ + S L AC + G + +D
Sbjct: 354 EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 212/395 (53%), Gaps = 4/395 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
AK F+ + + P+ A ++ + ++L F L G+ D+F + LKACA
Sbjct: 238 AKRVFDQMAVKKPV-ACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ L+ G H+ K GL S+ L+ FY C + A + F E+ V+WS+
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKP-NSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+I+ Y + EA+ F+ +R N NS T S+ ACS + + + G +H+ +
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ S +AL MY+KCG + A VF SM ++ ++T IS +G + + LF
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+M G+KP+ ++F +L+ACSH GLV++GK D M+R YN+ P+++HY CM+D+ AR
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLT 406
+GL+ EA +KNMP EP+A+ + FL C ++ + + + +L+ E A YVL
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLP 596
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
N+++ W++A+ + M ++ LKK CSW++
Sbjct: 597 FNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQ 631
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 2/241 (0%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSS-DCYTDNTL 139
E+ F + + ++G+S +++Y +AC + SLSHG + H ++ G+ + N +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCV 124
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
L+ Y +C ++ A ++FDEM+ V+ ++MI+AY +A+ +F M + +KP S
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
+LL + + G IH+++ R + + + T + MY KCG + A VF+
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
M K + T ++ G +D + LF + G++ D FSV+L AC+ + ++ G
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 320 K 320
K
Sbjct: 305 K 305
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 146/310 (47%), Gaps = 5/310 (1%)
Query: 68 TIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKT 127
T+I A A +++ F + SG P + Y LK+ +L G H+ ++
Sbjct: 154 TMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRA 213
Query: 128 GLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVF 187
GL S+ + ++ Y CG + A++VFD+MAV+ V + ++ Y + +AL +F
Sbjct: 214 GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 188 QEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKC 247
++ + +S +L AC+ + ++ G+ IH+ + + ++ V +GT L + Y KC
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC 333
Query: 248 GLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP-DGLSFSVI 306
+ A F + E N S++ +IS ++ + F + + +++ I
Sbjct: 334 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 307 LSACSHMGLVD-EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
ACS + + G+++ D + R ++ S ++ + ++ G + +A ++ ++M
Sbjct: 394 FQACSVLADCNIGGQVHADAIKR--SLIGSQYGESALITMYSKCGCLDDANEVFESMD-N 450
Query: 366 PNAVILRSFL 375
P+ V +F+
Sbjct: 451 PDIVAWTAFI 460
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+EA QEM A +S + L AC ++ ++S G +H + + SV L +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCV 124
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+MY +C ++ A +F+ M E N S T MISA G + LF+ M G KP
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
++ +L + LV+ + F R + + I+ +
Sbjct: 185 SMYTTLLKS-----LVNPRALDFGRQIHAHVIRAGL 215
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 209/383 (54%), Gaps = 4/383 (1%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P F WN I+R+ +PL+++ + + RS + PD ++ P +KA ++ + G
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
HS+ ++ G D + ++ + Y G AR+VFDE R + +W+++I +
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG--T 238
+EA+ +F +M+ + +P+ T+VS+ ++C + ++S +H + + + ++
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP 298
+L +MY KCG M A +F M ++N+ S++ MI +G + + F QM + G++P
Sbjct: 260 SLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRP 319
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
+ ++F +LSAC H GLV+EGK YF M + ++P + HYGC+VDLL+R G ++EA +
Sbjct: 320 NKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKV 379
Query: 359 IKNMPMEPNAVILRSFLGACRNQGSVPSLD--DKLMSKLESELGANYVLTANVFSTCASW 416
++ MPM+PN ++ +G C G V + M +LE YV+ ANV++ W
Sbjct: 380 VEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMW 439
Query: 417 KDASNLRLAMKQKGLKKNPGCSW 439
KD +R MK K + K P S+
Sbjct: 440 KDVERVRKLMKTKKVAKIPAYSY 462
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 225/423 (53%), Gaps = 7/423 (1%)
Query: 29 DHNPYLISQFLLSAST-ISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFR 87
D + Y+ S + S S +S+ A+ F+ LP WN ++ + ++L+ F
Sbjct: 192 DSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 88 RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG 147
+++ G+ T L A + +G H L +KTG SD N L+ Y
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSK 311
Query: 148 AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
+ A +F+ M R + TW+S++ + L +F+ M + +P+ VTL ++L
Sbjct: 312 WLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLP 371
Query: 208 ACSKMVNVSAGESIHSYIT----RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
C ++ ++ G IH Y+ N + + +L +MY KCG ++ A +VF+SM K
Sbjct: 372 TCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Query: 264 NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF 323
+ S+ IMI+ G C + + +F+ M G+KPD ++F +L ACSH G ++EG+ +
Sbjct: 432 DSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFL 491
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS 383
+M +YNI P+ +HY C++D+L RA ++EAY++ + P+ N V+ RS L +CR G+
Sbjct: 492 AQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGN 551
Query: 384 --VPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
+ + K + +LE E YVL +NV+ +++ ++R AM+Q+ +KK PGCSW+
Sbjct: 552 KDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIV 611
Query: 442 VQN 444
++N
Sbjct: 612 LKN 614
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 158/310 (50%), Gaps = 5/310 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+F +N +I + +PL+++ +R ++ +G+ PD +T+P LK + LS H
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHG 184
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-TVVTWSSMIAAYVGSNSPS 181
L K G SDCY + L+ Y+ ++ A++VFDE+ R V W++++ Y
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
+AL VF +MR + T+ S+LSA + ++ G SIH + + + AL
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+MY K +++A +F +M E++L ++ ++ G ++LF +M G++PD +
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIV 364
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMV--RMYNIKPSVEH-YGCMVDLLARAGLIQEAYDI 358
+ + +L C + + +G+ M+ + N K S E + ++D+ + G +++A +
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMV 424
Query: 359 IKNMPMEPNA 368
+M ++ +A
Sbjct: 425 FDSMRVKDSA 434
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYITR-NHVDMSVELGTALFEMYAKCGLMKKA 253
E N T ++ L C++ + +G+ IH ++ R +D S GT+L MYAKCGLM++A
Sbjct: 56 EHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRA 115
Query: 254 LLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
+LVF E+++ + +IS +G D + + +M G+ PD +F +L M
Sbjct: 116 VLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM 174
Query: 314 GLVDEGKMY 322
L D K++
Sbjct: 175 ELSDVKKVH 183
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 143/313 (45%), Gaps = 17/313 (5%)
Query: 57 LPITPPLFAWNTIIRALANSPTPLESLVFF--RRLQRSGLSPDNFTYPFALKACARVSSL 114
LP P LFA ALA+ + + + +R + ++ T L+ CA+
Sbjct: 21 LPRNPDLFAAIKPSSALASLYSTVSGQIEENPKRYEHHNVA----TCIATLQRCAQRKDY 76
Query: 115 SHGGVFHSLTLKTGLSSDCYTDNT-LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
G H ++ G D T L+ YA CG + A VF + R V ++++I+
Sbjct: 77 VSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISG 135
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
+V + SP +A+ ++EMR P+ T SLL M +S + +H + D
Sbjct: 136 FVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSD 194
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFT 289
+G+ L Y+K ++ A VF+ +P+++ +++ +AL N Q +D + +F+
Sbjct: 195 CYVGSGLVTSYSKFMSVEDAQKVFDELPDRD---DSVLWNALVNGYSQIFRFEDALLVFS 251
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
+M + G+ + + +LSA + G +D G+ V+ + V ++D+ ++
Sbjct: 252 KMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS-NALIDMYGKS 310
Query: 350 GLIQEAYDIIKNM 362
++EA I + M
Sbjct: 311 KWLEEANSIFEAM 323
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 230/403 (57%), Gaps = 19/403 (4%)
Query: 50 AKSFFNSLPIT-PPLFAWNTIIRALANSPTPLE--SLVFFRRLQRSGLSPDNFTYPFALK 106
A+ F+ +P+ L +WN++I A + ++ S +F ++ +S ++ +
Sbjct: 206 ARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKH 265
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
R+ G+F + + D T T++ YA G + A+ +FD+M R VV
Sbjct: 266 G--RIEDAK--GLFDVMPRR-----DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVA 316
Query: 167 WSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
++SM+A YV + EAL +F +M + ++ P+ TLV +L A +++ +S +H YI
Sbjct: 317 YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
+ +LG AL +MY+KCG ++ A+LVF + K++ + MI L HG +
Sbjct: 377 VEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAF 436
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
+ Q+E + LKPD ++F +L+ACSH GLV EG + F+ M R + I+P ++HYGCMVD+
Sbjct: 437 DMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDI 496
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSK-LESELGAN-- 402
L+R+G I+ A ++I+ MP+EPN VI R+FL AC + + +L++K L + G N
Sbjct: 497 LSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFET--GELVAKHLILQAGYNPS 554
Query: 403 -YVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
YVL +N++++ WKD +R MK++ ++K PGCSW+E+
Sbjct: 555 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDG 597
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 186/426 (43%), Gaps = 70/426 (16%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
F WN +I++ ++ P ++L+ + +G+S D F+ LKAC+R+ + G H
Sbjct: 87 FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGF 146
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
KTGL SD + N L+ Y CG +G +RQ+FD M R V+++SMI YV A
Sbjct: 147 LKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSA 206
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVN-----------------VSAGESIHSYIT 226
+F M + E N ++ S++S ++ + +S I Y+
Sbjct: 207 RELFDLMPM--EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVK 264
Query: 227 RNHVD-----------MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
++ V + + YAK G + A +F+ MP +++ ++ M++
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 276 GNHGCQKDVISLFTQME-DMGLKPDGLSFSVILSACSHMG----------LVDEGKMYFD 324
+ + + +F+ ME + L PD + ++L A + +G + E + Y
Sbjct: 325 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG 384
Query: 325 -----RMVRMYNI---------------KPSVEHYGCMVDLLARAGLIQEAYDI---IKN 361
++ MY+ S++H+ M+ LA GL + A+D+ I+
Sbjct: 385 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 362 MPMEPNAVILRSFLGACRNQGSVPS--LDDKLMS---KLESELGANYVLTANVFSTCASW 416
+ ++P+ + L AC + G V L +LM K+E L +Y ++ S S
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRL-QHYGCMVDILSRSGSI 503
Query: 417 KDASNL 422
+ A NL
Sbjct: 504 ELAKNL 509
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 208/398 (52%), Gaps = 7/398 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F + + +W +I + E++ F ++R G+ P+ FTY L A
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+S H+ +KT LL Y G + A +VF + + +V WS+
Sbjct: 409 VISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKM-VNVSAGESIHSYITRN 228
M+A Y + A+ +F E+ KPN T S+L+ C+ ++ G+ H + ++
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+D S+ + +AL MYAK G ++ A VF EK+L S+ MIS HG + +F
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+M+ +K DG++F + +AC+H GLV+EG+ YFD MVR I P+ EH CMVDL +R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLT 406
AG +++A +I+NMP + I R+ L ACR + + L + + ++ E A YVL
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLL 704
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+N+++ W++ + +R M ++ +KK PG SW+EV+N
Sbjct: 705 SNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKN 742
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 1/248 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ W T+I A + E L F R+Q G P++FT+ AL A G H+
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+ +K GL N+L+ Y CG + AR +FD+ V++VVTW+SMI+ Y + E
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
AL +F MRL + + + S++ C+ + + E +H + + + TAL
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 243 MYAKCGLMKKALLVFNSMP-EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
Y+KC M AL +F + N+ S+T MIS + +++ + LF++M+ G++P+
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 302 SFSVILSA 309
++SVIL+A
Sbjct: 399 TYSVILTA 406
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E+ F + R G+ D + LK A + G H +K G D +L+
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLV 135
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
Y R+VFDEM R VVTW+++I+ Y ++ E L +F M+ +PNS
Sbjct: 136 DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSF 195
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T + L ++ G +H+ + +N +D ++ + +L +Y KCG ++KA ++F+
Sbjct: 196 TFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKT 255
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
K++ ++ MIS +G + + +F M ++ SF+ ++ C+++
Sbjct: 256 EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANL 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACS 210
A +FD+ R ++ S++ + EA +F + RL E S+ S+L +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI-FSSVLKVSA 104
Query: 211 KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTI 270
+ + G +H + V +GT+L + Y K K VF+ M E+N+ ++T
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 271 MISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
+IS + +V++LF +M++ G +P+ +F+ L + G+ G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 222/417 (53%), Gaps = 37/417 (8%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH--GGVFHS 122
+W + I L + E+ F + +G+ P++ T+ L C +S S G + H
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 123 LTLKTGLS--------------------------------SDCYTDNTLLKFYADCGAIG 150
K GL + T NT++ Y G +
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 151 FARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACS 210
A ++FD+M R +++W++MI +V EAL F+EM+++ KP+ V +++ L+AC+
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 211 KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTI 270
+ +S G +H Y+ +V + +L ++Y +CG ++ A VF +M ++ + S+
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 271 MISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMY 330
+I +G + + F +M++ G KPD ++F+ L+ACSH+GLV+EG YF M Y
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY 337
Query: 331 NIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDK 390
I P +EHYGC+VDL +RAG +++A ++++MPM+PN V++ S L AC N G+ L ++
Sbjct: 338 RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAER 397
Query: 391 LM---SKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
LM + L + +NYV+ +N+++ W+ AS +R MK GLKK PG S +E+ +
Sbjct: 398 LMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 3/232 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P L +W +I E+L++FR +Q SG+ PD AL AC
Sbjct: 159 AAKMFDKMP-ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ +LS G H L ++ N+L+ Y CG + FARQVF M RTVV+W+S
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I + + + E+L F++M+ KP++VT L+ACS + V G + ++
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY 337
Query: 230 -VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK-NLQSFTIMISALGNHG 279
+ +E L ++Y++ G ++ AL + SMP K N +++A NHG
Sbjct: 338 RISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHG 389
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 43/247 (17%)
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
Q ++ T V+W+S I + +EA F +M LA +PN +T ++LLS C
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 214 NVSA--GESIHSY-----ITRNHVDMSVELGTALFEMYAKCGLMKKALLV---------- 256
+ S G+ +H Y + RNHV +GTA+ MY+K G KKA LV
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHV----MVGTAIIGMYSKRGRFKKARLVFDYMEDKNSV 141
Query: 257 ---------------------FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG 295
F+ MPE++L S+T MI+ G Q++ + F +M+ G
Sbjct: 142 TWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISG 201
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
+KPD ++ L+AC+++G + G ++ R V + K +V ++DL R G ++ A
Sbjct: 202 VKPDYVAIIAALNACTNLGALSFG-LWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFA 260
Query: 356 YDIIKNM 362
+ NM
Sbjct: 261 RQVFYNM 267
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 222/400 (55%), Gaps = 12/400 (3%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P + ++T++ +L FR +++S + + T L A +
Sbjct: 179 ARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAIS 238
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ LS H L +K GL D + L+ Y G I AR++FD + VVTW+
Sbjct: 239 DLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNC 298
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI Y + E + + ++M+ KPNS T V LLS+C+ G ++ +
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ + LGTAL +MYAK GL++KA+ +FN M +K+++S+T MIS G HG ++ ++LF
Sbjct: 359 IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFN 418
Query: 290 QMEDMGLK--PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+ME+ K P+ ++F V+L+ACSH GLV EG F RMV Y+ P VEHYGC+VDLL
Sbjct: 419 KMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLG 478
Query: 348 RAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG----ANY 403
RAG ++EAY++I+N+P+ ++ R+ L ACR G+ L + +M +L +E+G A+
Sbjct: 479 RAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGN-ADLGESVMMRL-AEMGETHPADA 536
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+L A + + + + + L KG +K G S +E++
Sbjct: 537 ILLAGTHAVAGNPEKSLDNEL---NKG-RKEAGYSAIEIE 572
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 176/338 (52%), Gaps = 7/338 (2%)
Query: 29 DHNPYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
D + + +S+ L +S + + +A S F + T LF +NT+IR + S P + F +
Sbjct: 57 DKDDFAVSKLLAFSSVLDIRYASSIFEHVSNTN-LFMFNTMIRGYSISDEPERAFSVFNQ 115
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTD--NTLLKFYADC 146
L+ GL+ D F++ LK+C+R +S G H + L++G +TD N L+ FY C
Sbjct: 116 LRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFM--VFTDLRNALIHFYCVC 173
Query: 147 GAIGFARQVFDEMAVRT-VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
G I AR+VFDEM VT+S+++ Y+ + + AL +F+ MR + N TL+S
Sbjct: 174 GKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSF 233
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
LSA S + ++S ES H + +D+ + L TAL MY K G + A +F+ K++
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
++ MI G ++ + L QM+ +KP+ +F +LS+C++ G+ D
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD- 352
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
++ I +VD+ A+ GL+++A +I M
Sbjct: 353 LLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 220/385 (57%), Gaps = 14/385 (3%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG-GVFHSL 123
+WN+++ L + ++ F + + L ++ L AR +S +F +
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKM 242
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV--RTVVTWSSMIAAYVGSNSPS 181
+ +S +T++ Y+ G + AR +FD+M + + VVTW+ +IA Y
Sbjct: 243 PERNTVSW-----STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLK 297
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
EA + +M + K ++ ++S+L+AC++ +S G IHS + R+++ + + AL
Sbjct: 298 EADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL 357
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+MYAKCG +KKA VFN +P+K+L S+ M+ LG HG K+ I LF++M G++PD +
Sbjct: 358 DMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKV 417
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
+F +L +C+H GL+DEG YF M ++Y++ P VEHYGC+VDLL R G ++EA +++
Sbjct: 418 TFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQT 477
Query: 362 MPMEPNAVILRSFLGACRNQGSVPSLDDKL--MSKLESELGANYVLTANVFSTCASWKDA 419
MPMEPN VI + LGACR V + L + KL+ NY L +N+++ W+
Sbjct: 478 MPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGV 537
Query: 420 SNLRLAMKQKGLKKNPGCSWLEVQN 444
+++R MK G++K G S +E+++
Sbjct: 538 ADIRSKMKSMGVEKPSGASSVELED 562
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/337 (31%), Positives = 172/337 (51%), Gaps = 19/337 (5%)
Query: 32 PYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR 91
P LIS L T A FN + P + N++IRA A + P ++ F +QR
Sbjct: 55 PKLISALSLCRQT---NLAVRVFNQVQ-EPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQR 110
Query: 92 SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
GL DNFTYPF LKAC+ S L + H+ K GLSSD Y N L+ Y+ CG +G
Sbjct: 111 FGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGV 170
Query: 152 --ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
A ++F++M+ R V+W+SM+ V + +A +F EM + + ++ ++L
Sbjct: 171 RDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM----PQRDLISWNTMLDGY 226
Query: 210 SKMVNVS-AGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM--PEKNLQ 266
++ +S A E RN V S + Y+K G M+ A ++F+ M P KN+
Sbjct: 227 ARCREMSKAFELFEKMPERNTVSWST-----MVMGYSKAGDMEMARVMFDKMPLPAKNVV 281
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
++TI+I+ G K+ L QM GLK D + IL+AC+ GL+ G M +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG-MRIHSI 340
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
++ N+ + ++D+ A+ G +++A+D+ ++P
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 36/318 (11%)
Query: 46 SLPFAKSFFNSLPITPP-LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFA 104
+ A+ F+ +P+ + W II A E+ ++ SGL D
Sbjct: 262 DMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L AC LS G HS+ ++ L S+ Y N LL YA CG + A VF+++ + +
Sbjct: 322 LAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDL 381
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
V+W++M+ EA+ +F MR +P+ VT +++L +C
Sbjct: 382 VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSC--------------- 426
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
NH + ++ G F K V++ +P+ ++ + ++ LG G K+
Sbjct: 427 ---NHAGL-IDEGIDYFYSMEK---------VYDLVPQ--VEHYGCLVDLLGRVGRLKEA 471
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
I + ++ M ++P+ + + +L AC VD K D +V++ P +Y + +
Sbjct: 472 IKV---VQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPG--NYSLLSN 526
Query: 345 LLARAGLIQEAYDIIKNM 362
+ A A + DI M
Sbjct: 527 IYAAAEDWEGVADIRSKM 544
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 165/363 (45%), Gaps = 43/363 (11%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L CA ++ + H+ ++ L D + L+ + C A +VF+++ V
Sbjct: 26 LPKCANLNQVKQ---LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+S+I A+ ++ P +A VF EM+ ++ T LL ACS + + +H++
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLM--KKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
I + + + + AL + Y++CG + + A+ +F M E++ S+ M+ L G +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 283 DVISLFTQMEDMGL---------------------------KPDGLSFSVILSACSHMGL 315
D LF +M L + + +S+S ++ S G
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 262
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILR 372
++ ++ FD+M +V + ++ A GL++EA ++ M ++ +A +
Sbjct: 263 MEMARVMFDKMPLPAK---NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 373 SFLGACRNQGSVPSLDDKLMSKLE-SELGAN-YVLTA--NVFSTCASWKDASNLRLAMKQ 428
S L AC G + SL ++ S L+ S LG+N YVL A ++++ C + K A ++ + +
Sbjct: 320 SILAACTESGLL-SLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 429 KGL 431
K L
Sbjct: 379 KDL 381
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 215/385 (55%), Gaps = 9/385 (2%)
Query: 66 WNTIIRALANSPTPLESLVFFRR--LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
W T+I + + L +++ L+ + ++P + A++A A + S++ G H+
Sbjct: 181 WTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP--YCITIAVRASASIDSVTTGKQIHAS 238
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
+K G S+ N++L Y CG + A+ F EM + ++TW+++I+ S+S SEA
Sbjct: 239 VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEA 297
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
L +FQ PN T SL++AC+ + ++ G+ +H I R + +VEL AL +M
Sbjct: 298 LLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDM 357
Query: 244 YAKCGLMKKALLVFNSMPEK-NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
YAKCG + + VF + ++ NL S+T M+ G+HG + + LF +M G++PD +
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F +LSAC H GLV++G YF+ M Y I P + Y C+VDLL RAG I EAY++++ M
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 363 PMEPNAVILRSFLGAC---RNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDA 419
P +P+ + LGAC ++ G + L + + +L+ ++ YV+ + +++ W D
Sbjct: 478 PFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDF 537
Query: 420 SNLRLAMKQKGLKKNPGCSWLEVQN 444
+ +R M+ G KK G SW+ V+N
Sbjct: 538 ARVRKMMRMMGNKKEAGMSWILVEN 562
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 180/389 (46%), Gaps = 40/389 (10%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+S F+ +P + AW +I A+S + F + + G SP+ FT LK+C
Sbjct: 64 ARSLFDEMP-DRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCR 122
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG-AIGFARQVFDEMAVRTVVTWS 168
+ L++G + H + +K G+ Y DN ++ YA C + A +F ++ V+ VTW+
Sbjct: 123 NMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWT 182
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
++I + L ++++M L N + + + A + + +V+ G+ IH+ + +
Sbjct: 183 TLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKR 242
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
++ + ++ ++Y +CG + +A F+ M +K+L ++ +IS L + + +F
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMF 301
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+ E G P+ +F+ +++AC+++ ++ G+ R+ R +VE ++D+ A+
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKNVELANALIDMYAK 360
Query: 349 AGLIQ-----------------------------------EAYDIIKNMPMEPNAVILRS 373
G I E +D + + + P+ ++ +
Sbjct: 361 CGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMA 420
Query: 374 FLGACRNQGSVPSLDDKLMSKLESELGAN 402
L ACR+ G V K + +ESE G N
Sbjct: 421 VLSACRHAGLVEK-GLKYFNVMESEYGIN 448
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 6/227 (2%)
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPN 198
L+ Y + G + AR +FDEM R VV W++MI Y SN + A F EM PN
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGL-MKKALLVF 257
TL S+L +C M ++ G +H + + ++ S+ + A+ MYA C + M+ A L+F
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 258 NSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM--EDMGLKPDGLSFSVILSACSHMGL 315
+ KN ++T +I+ + G + ++ QM E+ + P ++ +V SA +
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS--IDS 228
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
V GK +++ + ++ ++DL R G + EA M
Sbjct: 229 VTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 234 bits (598), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 212/386 (54%), Gaps = 4/386 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L +WN+II+A + PL ++ F+ ++ S + PD T +++ +
Sbjct: 313 LISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQG 372
Query: 123 LTLKTG-LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
TL+ G D N ++ YA G + AR VF+ + V++W+++I+ Y + S
Sbjct: 373 FTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 182 EALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EA+ ++ M E N T VS+L ACS+ + G +H + +N + + V + T+L
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+MY KCG ++ AL +F +P N + +I+ G HG + + LF +M D G+KPD
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++F +LSACSH GLVDEG+ F+ M Y I PS++HYGCMVD+ RAG ++ A IK
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 361 NMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLTANVFSTCASWKD 418
+M ++P+A I + L ACR G+V + + + ++E E +VL +N++++ W+
Sbjct: 613 SMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 672
Query: 419 ASNLRLAMKQKGLKKNPGCSWLEVQN 444
+R KGL+K PG S +EV N
Sbjct: 673 VDEIRSIAHGKGLRKTPGWSSMEVDN 698
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 163/316 (51%), Gaps = 8/316 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P+ + +WN +I S E+L L+ + D+ T L AC
Sbjct: 204 ARILFDEMPVRD-MGSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACT 258
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ G HS ++K GL S+ + N L+ YA+ G + ++VFD M VR +++W+S
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I AY + P A+ +FQEMRL+ +P+ +TL+SL S S++ ++ A S+ + R
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 230 VDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ + +G A+ MYAK GL+ A VFN +P ++ S+ +IS +G + I ++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 289 TQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
ME+ G + + ++ +L ACS G + +G R+++ + V + D+
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYG 497
Query: 348 RAGLIQEAYDIIKNMP 363
+ G +++A + +P
Sbjct: 498 KCGRLEDALSLFYQIP 513
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 189/395 (47%), Gaps = 21/395 (5%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQ-RSGLSPDNFTYPFA 104
++ A+ F+ + ++AWN +I + E + F SGL+PD T+P
Sbjct: 101 NVALARHTFDHIQ-NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSV 159
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
LKAC V G H L LK G D Y +L+ Y+ A+G AR +FDEM VR +
Sbjct: 160 LKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDM 216
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+W++MI+ Y S + EAL + +R +SVT+VSLLSAC++ + + G +IHSY
Sbjct: 217 GSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
++ ++ + + L ++YA+ G ++ VF+ M ++L S+ +I A +
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
ISLF +M ++PD L+ + S S +G + + +R + +V
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 345 LLARAGLIQEAYDIIKNMP----MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG 400
+ A+ GL+ A + +P + N +I G +N + +++ + + E E+
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTII----SGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 401 ANYVLTANVFSTCASWKDASNLRLAMKQKG-LKKN 434
AN +V C+ A LR MK G L KN
Sbjct: 449 ANQGTWVSVLPACSQ---AGALRQGMKLHGRLLKN 480
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 17/229 (7%)
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KP 197
L+ Y G + AR FD + R V W+ MI+ Y + + SE + F L++ P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 198 NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVF 257
+ T S+L AC +++ G IH + V + +L +Y++ + A ++F
Sbjct: 152 DYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 258 NSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVD 317
+ MP +++ S+ MIS G K+ ++L + M D ++ +LSAC+ G +
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFN 264
Query: 318 EGKMYFDRMVRMYNIKPSVEHY----GCMVDLLARAGLIQEAYDIIKNM 362
G + Y+IK +E ++DL A G +++ + M
Sbjct: 265 RGV-----TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 209/364 (57%), Gaps = 3/364 (0%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E+L FR ++ + P T+ L+A A ++SL H L K GL+ D + + L+
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALI 496
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
Y++C + +R VFDEM V+ +V W+SM A YV + EAL++F E++L+ E+P+
Sbjct: 497 DVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEF 556
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T ++++A + +V G+ H + + ++ + + AL +MYAKCG + A F+S
Sbjct: 557 TFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSA 616
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+++ + +IS+ NHG K + + +M G++P+ ++F +LSACSH GLV++G
Sbjct: 617 ASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGL 676
Query: 321 MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRN 380
F+ M+R + I+P EHY CMV LL RAG + +A ++I+ MP +P A++ RS L C
Sbjct: 677 KQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAK 735
Query: 381 QGSVPSLDDKLMSKLESE--LGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCS 438
G+V + + S+ ++ + +N++++ W +A +R MK +G+ K PG S
Sbjct: 736 AGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRS 795
Query: 439 WLEV 442
W+ +
Sbjct: 796 WIGI 799
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 195/432 (45%), Gaps = 53/432 (12%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGL-SPDNFTYPFAL 105
+ +A+ F +P L +W+T++ A + ESLV F R+ SP+ + +
Sbjct: 95 MVYARKVFEKMP-ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFI 153
Query: 106 KACARVSSLSHGGVFH--SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT 163
+AC+ + VF S +K+G D Y L+ FY G I +AR VFD + ++
Sbjct: 154 QACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
VTW++MI+ V +L +F ++ N P+ L ++LSACS + + G+ IH+
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHA 273
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
+I R ++M L L + Y KCG + A +FN MP KN+ S+T ++S + K+
Sbjct: 274 HILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKE 333
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH----- 338
+ LFT M GLKPD + S IL++C+ + + F V Y IK ++ +
Sbjct: 334 AMELFTSMSKFGLKPDMYACSSILTSCASLHALG-----FGTQVHAYTIKANLGNDSYVT 388
Query: 339 ------------------------------YGCMVDLLARAGL---IQEAYDIIKNMPME 365
+ M++ +R G + EA +I ++M
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 366 PNAVILRSFLGACRNQGSVPSLD-DKLMSKLESELGANYVLTA-----NVFSTCASWKDA 419
L +F+ R S+ SL K + L + G N + A +V+S C KD+
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 420 SNLRLAMKQKGL 431
+ MK K L
Sbjct: 509 RLVFDEMKVKDL 520
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 4/253 (1%)
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
L + V H + GL D Y N L+ Y+ G + +AR+VF++M R +V+WS+M++A
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 174 YVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGE--SIHSYITRNHV 230
E+L VF E R + PN L S + ACS + + S++ ++
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQ 290
D V +GT L + Y K G + A LVF+++PEK+ ++T MIS G + LF Q
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
+ + + PDG S +LSACS + ++ GK ++R Y ++ ++D + G
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCG 298
Query: 351 LIQEAYDIIKNMP 363
+ A+ + MP
Sbjct: 299 RVIAAHKLFNGMP 311
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 174/396 (43%), Gaps = 9/396 (2%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
++ +A+ F++LP W T+I SL F +L + PD + L
Sbjct: 198 NIDYARLVFDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVL 256
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
AC+ + L G H+ L+ GL D N L+ Y CG + A ++F+ M + ++
Sbjct: 257 SACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNII 316
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+W+++++ Y + EA+ +F M KP+ S+L++C+ + + G +H+Y
Sbjct: 317 SWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYT 376
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ---K 282
+ ++ + +L +MYAKC + A VF+ ++ F MI G Q
Sbjct: 377 IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELH 436
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCM 342
+ +++F M ++P L+F +L A + + + K M + Y + + +
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK-YGLNLDIFAGSAL 495
Query: 343 VDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGAN 402
+D+ + ++++ + M ++ + F G + + +L+ L +L E
Sbjct: 496 IDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDE 555
Query: 403 YVLTANVFSTC---ASWKDASNLRLAMKQKGLKKNP 435
+ AN+ + AS + + ++GL+ NP
Sbjct: 556 FTF-ANMVTAAGNLASVQLGQEFHCQLLKRGLECNP 590
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 136/312 (43%), Gaps = 37/312 (11%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F+ + + L WN++ E+L F LQ S PD FT+ + A ++S
Sbjct: 512 FDEMKV-KDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLAS 570
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
+ G FH LK GL + Y N LL YA CG+ A + FD A R VV W+S+I++
Sbjct: 571 VQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
Y +AL + ++M +PN +T V +LSACS H +
Sbjct: 631 YANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS------------------HAGL- 671
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
VE G FE+ + G+ E + + M+S LG G L +E
Sbjct: 672 VEDGLKQFELMLRFGI------------EPETEHYVCMVSLLGRAGRLNKAREL---IEK 716
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
M KP + + +LS C+ G V+ + + M + + K S + + ++ A G+
Sbjct: 717 MPTKPAAIVWRSLLSGCAKAGNVELAE-HAAEMAILSDPKDS-GSFTMLSNIYASKGMWT 774
Query: 354 EAYDIIKNMPME 365
EA + + M +E
Sbjct: 775 EAKKVRERMKVE 786
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 208/403 (51%), Gaps = 24/403 (5%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+WN II A + E+L F + RS + PD FT+ LKAC SL +G HS
Sbjct: 450 SWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT--------------------V 164
+K+G++S+ +L+ Y+ CG I A ++ R
Sbjct: 509 VKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMC 568
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
V+W+S+I+ YV +A +F M P+ T ++L C+ + + G+ IH+
Sbjct: 569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ + + V + + L +MY+KCG + + L+F ++ ++ MI +HG ++
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
I LF +M +KP+ ++F IL AC+HMGL+D+G YF M R Y + P + HY MVD
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC---RNQGSVPSLDDKLMSKLESELGA 401
+L ++G ++ A ++I+ MP E + VI R+ LG C RN V + +L+ + +
Sbjct: 749 ILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSS 808
Query: 402 NYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
Y L +NV++ W+ S+LR M+ LKK PGCSW+E+++
Sbjct: 809 AYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKD 851
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 182/403 (45%), Gaps = 19/403 (4%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A SFFN +P+ + +WN+++ + L+S+ F + R G+ D T+ LK C+
Sbjct: 133 ANSFFNMMPVRD-VVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCS 191
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ S G H + ++ G +D + LL YA + +VF + + V+WS+
Sbjct: 192 FLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSA 251
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+IA V +N S AL F+EM+ N + S+L +C+ + + G +H++ ++
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ TA +MYAKC M+ A ++F++ N QS+ MI+ + LF
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN--IKPSVEHYGCM----V 343
++ GL D +S S + AC+ + + EG +++Y IK S+ C+ +
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEG-------LQIYGLAIKSSLSLDVCVANAAI 424
Query: 344 DLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANY 403
D+ + + EA+ + M +AV + + A G +S L S + +
Sbjct: 425 DMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 404 VLTANVFSTCASWKDASNLRL--AMKQKGLKKNP--GCSWLEV 442
++ C + + ++ + G+ N GCS +++
Sbjct: 484 FTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 526
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 90 QRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
Q + +S NF++ F K CA+ +L G H+ + +G + N LL+ Y +
Sbjct: 42 QVNSVSTTNFSFVF--KECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDF 99
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA-------------------------- 183
A VFD+M +R VV+W+ MI Y SN +A
Sbjct: 100 VSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNG 159
Query: 184 -----LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
+ VF +M + + T +L CS + + S G IH + R D V +
Sbjct: 160 ESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAAS 219
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC-QKDVISL----FTQMED 293
AL +MYAK ++L VF +PEKN S++ +I+ GC Q +++SL F +M+
Sbjct: 220 ALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIA-----GCVQNNLLSLALKFFKEMQK 274
Query: 294 MGLKPDGLSFSVILSACS 311
+ ++ +L +C+
Sbjct: 275 VNAGVSQSIYASVLRSCA 292
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 212/400 (53%), Gaps = 4/400 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS-PDNFTYPFAL 105
L A+ F+ + ++W ++ P E+LV + +QR S P+ FT A+
Sbjct: 167 LEEARKLFDEM-TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAV 225
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
A A V + G H ++ GL SD ++L+ Y CG I AR +FD++ + VV
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+W+SMI Y S+ E +F E+ + E+PN T +L+AC+ + G+ +H Y+
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
TR D ++L +MY KCG ++ A V + P+ +L S+T +I +G + +
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEAL 405
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
F + G KPD ++F +LSAC+H GLV++G +F + + + + +HY C+VDL
Sbjct: 406 KYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDL 465
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGANY 403
LAR+G ++ +I MPM+P+ + S LG C G++ ++ + + K+E E Y
Sbjct: 466 LARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTY 525
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
V AN+++ W++ +R M++ G+ K PG SW E++
Sbjct: 526 VTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIK 565
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 158/350 (45%), Gaps = 34/350 (9%)
Query: 96 PDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQV 155
P TY ++ C++ +L G H +G N LL+ YA CG++ AR+V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 156 FDEMAVRTVV-------------------------------TWSSMIAAYVGSNSPSEAL 184
FDEM R + +W++M+ YV + P EAL
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEAL 202
Query: 185 HVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
++ M R+ N +PN T+ ++A + + + G+ IH +I R +D L ++L +M
Sbjct: 203 VLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDM 262
Query: 244 YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSF 303
Y KCG + +A +F+ + EK++ S+T MI ++ SLF+++ +P+ +F
Sbjct: 263 YGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTF 322
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
+ +L+AC+ + + GK M R+ P +VD+ + G I+ A ++ P
Sbjct: 323 AGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP 381
Query: 364 MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTC 413
+P+ V S +G C G L+S ++V NV S C
Sbjct: 382 -KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 177 SNSPSEALHVFQEMRLANE---------KPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
+N EA+ V +L E KP + T +L+ CS+ + G+ +H +I
Sbjct: 54 ANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRT 113
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ + + L MYAKCG + A VF+ MP ++L S+ +M++ G ++ L
Sbjct: 114 SGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKL 173
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
F +M + D S++ +++ +E + + M R+ N +P++
Sbjct: 174 FDEMTE----KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI 218
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 212/406 (52%), Gaps = 36/406 (8%)
Query: 70 IRALANSPTPLESLVFFRRLQRSGLSP-DNFTYPFALKACARVSSLSHGGVFHSLTLKTG 128
+ + AN ++L F ++ S P D + ALK+CA GG H+ ++K+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 129 LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQ 188
S+ + LL Y C ++ AR++FDE+ R V W++MI+ Y EA+ +++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 189 EMR-LANE--------------------------------KPNSVTLVSLLSACSKMVNV 215
M + NE KPN +TL++L+SACS +
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
+ IHSY RN ++ +L + L E Y +CG + LVF+SM ++++ +++ +ISA
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 276 GNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
HG + + F +ME + PD ++F +L ACSH GL DE +YF RM Y ++ S
Sbjct: 259 ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRAS 318
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMS 393
+HY C+VD+L+R G +EAY +I+ MP +P A + LGACRN G + + + +
Sbjct: 319 KDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELL 378
Query: 394 KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSW 439
+E E ANYVL ++ + ++A LRL MK+ G+K +PG SW
Sbjct: 379 MVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 9/236 (3%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPT-PLESLVFFRRLQRSGLSPDNFTYPFALKAC 108
A + ++ + P ++N II+ L + ++ F+R++ P+ T + AC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+ + + HS + + + L++ Y CG+I + + VFD M R VV WS
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
S+I+AY AL FQEM LA P+ + +++L ACS + + Y R
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACS---HAGLADEALVYFKRM 309
Query: 229 HVDMSVELG----TALFEMYAKCGLMKKALLVFNSMPEK-NLQSFTIMISALGNHG 279
D + + L ++ ++ G ++A V +MPEK +++ ++ A N+G
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL-LSACSKMVNVSAGESIH 222
+++ + +++Y + +AL++F +M + P + SL L +C+ G S+H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
++ +++ + +G AL +MY KC + A +F+ +P++N + MIS + G K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV--DEGK---MYFDRMVRMYNIKPSVE 337
+ + L+ M+ M P+ SF+ I+ GLV ++G + F R + + KP++
Sbjct: 132 EAVELYEAMDVM---PNESSFNAIIK-----GLVGTEDGSYRAIEFYRKMIEFRFKPNLI 183
Query: 338 HYGCMVDLLARAG---LIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
+V + G LI+E + +EP+ + + A GS+
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSI 233
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 209/412 (50%), Gaps = 35/412 (8%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
F +N +I+A P ES+V + L GL P + T+ F A A SS + HS
Sbjct: 48 FLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQ 107
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
++G SD + TL+ YA GA+ AR+VFDEM+ R V W++MI Y A
Sbjct: 108 FFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAA 167
Query: 184 LHVFQEMRLAN--------------------------------EKPNSVTLVSLLSACSK 211
+ +F M N KPN +T+VS+L AC+
Sbjct: 168 MELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACAN 227
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP-EKNLQSFTI 270
+ + G + Y N ++ + A EMY+KCG++ A +F + ++NL S+
Sbjct: 228 LGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNS 287
Query: 271 MISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMY 330
MI +L HG + ++LF QM G KPD ++F +L AC H G+V +G+ F M ++
Sbjct: 288 MIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVH 347
Query: 331 NIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLD 388
I P +EHYGCM+DLL R G +QEAYD+IK MPM+P+AV+ + LGAC G+V +
Sbjct: 348 KISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIA 407
Query: 389 DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWL 440
+ + KLE N V+ +N+++ W +R MK++ + K G S+
Sbjct: 408 SEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYF 459
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 111/265 (41%), Gaps = 33/265 (12%)
Query: 151 FARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACS 210
+AR++FD ++ +I AY + P E++ ++ + +P+ T + +A +
Sbjct: 34 YARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASA 93
Query: 211 KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGL--------------------- 249
+ +HS R+ + T L YAK G
Sbjct: 94 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNA 153
Query: 250 ----------MKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DMGLKP 298
MK A+ +F+SMP KN+ S+T +IS +G + + +F ME D +KP
Sbjct: 154 MITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
+ ++ +L AC+++G ++ G+ + R ++ +++ ++ G+I A +
Sbjct: 214 NHITVVSVLPACANLGELEIGRR-LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 359 IKNMPMEPNAVILRSFLGACRNQGS 383
+ + + N S +G+ G
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGK 297
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 212/372 (56%), Gaps = 35/372 (9%)
Query: 30 HNPYLISQFL-LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
++ L+ Q + +S+S +A FN L +P F WN +IR+L+ + P E+L+ F
Sbjct: 50 NDQLLVRQLISVSSSFGETQYASLVFNQLQ-SPSTFTWNLMIRSLSVNHKPREALLLFIL 108
Query: 89 LQRSGLSP-DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG 147
+ S S D FT+PF +KAC SS+ G H L +K G +D + NTL+ Y CG
Sbjct: 109 MMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCG 168
Query: 148 AIGFARQVFD-------------------------------EMAVRTVVTWSSMIAAYVG 176
R+VFD +M +R VV+W++MI AYV
Sbjct: 169 KPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVK 228
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ P EA +F+ M++ + KPN T+V+LL A +++ ++S G +H Y +N + L
Sbjct: 229 NRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFL 288
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG- 295
GTAL +MY+KCG ++ A VF+ M K+L ++ MI++LG HGC ++ +SLF +ME+
Sbjct: 289 GTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEAS 348
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
++PD ++F +LSAC++ G V +G YF RM+++Y I P EH CM+ LL +A +++A
Sbjct: 349 VEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKA 408
Query: 356 YDIIKNMPMEPN 367
+++++M +P+
Sbjct: 409 SNLVESMDSDPD 420
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 138/348 (39%), Gaps = 69/348 (19%)
Query: 103 FALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR 162
+ L+ C+ S L H+ +K L++D L+ + G +A VF+++
Sbjct: 25 YFLRTCSNFSQLKQ---IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKP-NSVTLVSLLSACSKMVNVSAGESI 221
+ TW+ MI + ++ P EAL +F M ++++ + T ++ AC ++ G +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCG-------------------------------LM 250
H + V L ++Y KCG +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
A +VFN MP +N+ S+T MI+A + + LF +M+ +KP+ + +L A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 311 SHMGLVDEGKMYFD---------------RMVRMYNIKPSVEH---------------YG 340
+ +G + G+ D ++ MY+ S++ +
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 341 CMVDLLARAGLIQEAYDIIKNM----PMEPNAVILRSFLGACRNQGSV 384
M+ L G +EA + + M +EP+A+ L AC N G+V
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNV 369
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 217/426 (50%), Gaps = 40/426 (9%)
Query: 56 SLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLS 115
SL T + +WN I+ A A+SP + L L ++ D+ T LK C V +
Sbjct: 390 SLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIG 449
Query: 116 HGGVFHSLTLKTGLSSDCYT---DNTLLKFYADCGAIGFARQVF---------------- 156
H ++K GL D N LL YA CG + +A ++F
Sbjct: 450 KVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLL 509
Query: 157 ----------------DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
EM+ + TWS M+ Y S P+EA+ VF+E++ +PN+V
Sbjct: 510 SGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTV 569
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T+++LL C+++ ++ H YI R + + L L ++YAKCG +K A VF S
Sbjct: 570 TIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSD 628
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
++L FT M++ HG K+ + +++ M + +KPD + + +L+AC H GL+ +G
Sbjct: 629 ARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGL 688
Query: 321 MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRN 380
+D + ++ +KP++E Y C VDL+AR G + +AY + MP+EPNA I + L AC
Sbjct: 689 QIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTT 748
Query: 381 QGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGC 437
+ S+ + L+ + ES+ N+VL +N+++ A W+ LR MK+K +KK GC
Sbjct: 749 YNRMDLGHSVANHLL-QAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGC 807
Query: 438 SWLEVQ 443
SWLEV
Sbjct: 808 SWLEVD 813
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 159/354 (44%), Gaps = 50/354 (14%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG-LSPDNFTYPFALKAC 108
A S F + + L +WN +I A++ ++ F L G +SPD+ T L C
Sbjct: 282 AASLFTRMG-SKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVC 340
Query: 109 ARVSSLSHGGVFHSLTLK-TGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
A+++ L+ G HS L+ + L D N L+ FYA G A F M+ + +++W
Sbjct: 341 AQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISW 400
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKP--NSVTLVSLLSACSKMVNVSAGESIHSYI 225
++++ A+ ++SP + + L NE +SVT++SLL C + + + +H Y
Sbjct: 401 NAILDAF--ADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYS 458
Query: 226 TRN---HVDMSVELGTALFEMYAKCGLMK------------------------------- 251
+ H + +LG AL + YAKCG ++
Sbjct: 459 VKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSH 518
Query: 252 -KALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
A ++F M +L ++++M+ C + I +F +++ G++P+ ++ +L C
Sbjct: 519 DDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVC 578
Query: 311 SHMGLVDEGKMYFDRMVRMYNIK---PSVEHYGCMVDLLARAGLIQEAYDIIKN 361
+ + ++ R Y I+ + G ++D+ A+ G ++ AY + ++
Sbjct: 579 AQL-----ASLHLVRQCHGYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQS 627
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 7/289 (2%)
Query: 79 PLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNT 138
PL V RL SG D+ + +KACA VS L+ G H K G + +
Sbjct: 3 PLRQFVQNFRLL-SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKS 61
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KP 197
+L YA C + +++F +M V W+ ++ + + E + F+ M A+E KP
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG-LSVSCGRETMRFFKAMHFADEPKP 120
Query: 198 NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG-LMKKALLV 256
+SVT +L C ++ + G+S+HSYI + ++ +G AL MYAK G + A
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG-- 314
F+ + +K++ S+ +I+ + D F M +P+ + + +L C+ M
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 315 -LVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
G+ +V+ ++ V +V R G I+EA + M
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 182/403 (45%), Gaps = 24/403 (5%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
P A + F+ + + +WN II + + ++ F + + P+ T L
Sbjct: 174 FPDAYTAFDGIA-DKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLP 232
Query: 107 ACARVS---SLSHGGVFHSLTL-KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR 162
CA + + G HS + ++ L + + N+L+ FY G I A +F M +
Sbjct: 233 VCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
+V+W+ +IA Y + +A +F + + P+SVT++S+L C+++ ++++G+ I
Sbjct: 293 DLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Query: 222 HSYITRN-HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
HSYI R+ ++ +G AL YA+ G A F+ M K++ S+ ++ A +
Sbjct: 353 HSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPK 412
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH-- 338
Q ++L + + + D ++ +L C ++ + GK+ + V Y++K + H
Sbjct: 413 QFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI--GKV---KEVHGYSVKAGLLHDE 467
Query: 339 -----YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDK--L 391
++D A+ G ++ A+ I + V S L N G S DD L
Sbjct: 468 EEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG---SHDDAQML 524
Query: 392 MSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKN 434
+++ + + L +++ +A + ++ +G++ N
Sbjct: 525 FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPN 567
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 225/439 (51%), Gaps = 39/439 (8%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL-QRSGLSPDNFT 100
AS + F+ +P + +WN +I + + +++ F+R+ Q S L D T
Sbjct: 92 ASLGKIEITHKVFDEMP-QRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA 160
L AC+ + +L G + + T N L+ + CG + AR VFD M
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMR 209
Query: 161 -------------------------------VRTVVTWSSMIAAYVGSNSPSEALHVFQE 189
V+ VV W++M+ YV N EAL +F+
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 190 MRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGL 249
M+ A +P++ LVSLL+ C++ + G+ IH YI N V + +GTAL +MYAKCG
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 250 MKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
++ AL VF + E++ S+T +I L +G + L+ +ME++G++ D ++F +L+A
Sbjct: 330 IETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTA 389
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAV 369
C+H G V EG+ F M +N++P EH C++DLL RAGL+ EA ++I M E +
Sbjct: 390 CNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDET 449
Query: 370 ILR---SFLGACRNQGSVPSLDD--KLMSKLESELGANYVLTANVFSTCASWKDASNLRL 424
++ S L A RN G+V + + + K+E + + L A+V+++ W+D +N+R
Sbjct: 450 LVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRR 509
Query: 425 AMKQKGLKKNPGCSWLEVQ 443
MK G++K PGCS +E+
Sbjct: 510 KMKDLGIRKFPGCSSIEID 528
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 112/365 (30%), Positives = 181/365 (49%), Gaps = 34/365 (9%)
Query: 56 SLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLS 115
SL TP L +N ++++LA+ + + L F L+ GL PDNFT P LK+ R+ +
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 116 HGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYV 175
G H +K GL D Y N+L+ YA G I +VFDEM R VV+W+ +I++YV
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 176 GSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
G+ +A+ VF+ M + +N K + T+VS LSACS + N+ GE I+ ++ +MSV
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSV 182
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMI---------------------- 272
+G AL +M+ KCG + KA VF+SM +KN++ +T M+
Sbjct: 183 RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK 242
Query: 273 -----SALGNHGCQ----KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYF 323
+A+ N Q + + LF M+ G++PD +L+ C+ G +++GK +
Sbjct: 243 DVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK-WI 301
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS 383
+ + +VD+ A+ G I+ A ++ + A G N S
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 384 VPSLD 388
+LD
Sbjct: 362 GRALD 366
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/416 (31%), Positives = 223/416 (53%), Gaps = 11/416 (2%)
Query: 32 PYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR 91
P L+ + A ++ A+ F+ +P+ + W +++ E F ++
Sbjct: 148 PSLVEMY---AQLGTMESAQKVFDEIPVRNSVL-WGVLMKGYLKYSKDPEVFRLFCLMRD 203
Query: 92 SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGL--SSDCYTDNTLLKFYADCGAI 149
+GL+ D T +KAC V + G H ++++ SD Y +++ Y C +
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSD-YLQASIIDMYVKCRLL 262
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
AR++F+ R VV W+++I+ + EA +F++M + PN TL ++L +C
Sbjct: 263 DNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSC 322
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFT 269
S + ++ G+S+H Y+ RN ++M T+ +MYA+CG ++ A VF+ MPE+N+ S++
Sbjct: 323 SSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWS 382
Query: 270 IMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
MI+A G +G ++ + F +M+ + P+ ++F +LSACSH G V EG F+ M R
Sbjct: 383 SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
Query: 330 YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP---S 386
Y + P EHY CMVDLL RAG I EA I NMP++P A + L ACR V
Sbjct: 443 YGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGE 502
Query: 387 LDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+ +KL+S +E E + YVL +N+++ W+ + +R M KG +K+ G S EV
Sbjct: 503 IAEKLLS-MEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 185/388 (47%), Gaps = 13/388 (3%)
Query: 47 LPFAKSFFNSLPI-TPPLFAWNTIIRALANSPTPLES--LVFFRRLQRSGLSPDNFTYPF 103
L FA S FN +P +WNTI+ + S T S L+ + R++R D+F F
Sbjct: 55 LDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVF 114
Query: 104 ALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT 163
A+KAC + L +G + H L +K GL D Y +L++ YA G + A++VFDE+ VR
Sbjct: 115 AIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRN 174
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
V W ++ Y+ + E +F MR +++TL+ L+ AC + G+ +H
Sbjct: 175 SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHG 234
Query: 224 Y-ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
I R+ +D S L ++ +MY KC L+ A +F + ++N+ +T +IS C++
Sbjct: 235 VSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK--CER 292
Query: 283 DV--ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG 340
V LF QM + P+ + + IL +CS +G + GK M+R I+ ++
Sbjct: 293 AVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIR-NGIEMDAVNFT 351
Query: 341 CMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG 400
+D+ AR G IQ A + MP E N + S + A G D +
Sbjct: 352 SFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV 410
Query: 401 ANYVLTANVFSTCASWKDASNLRLAMKQ 428
N V ++ S C+ + N++ KQ
Sbjct: 411 PNSVTFVSLLSACSH---SGNVKEGWKQ 435
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 207/392 (52%), Gaps = 3/392 (0%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
FN +P + W+ +I + E++ F R++ + + P+ FT L CA
Sbjct: 305 FNEMP-KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
G H L +K G D Y N L+ YA C + A ++F E++ + V+W+++I
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
Y +A +F+E VT S L AC+ + ++ G +H + +
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
V + +L +MYAKCG +K A VFN M ++ S+ +IS HG + + + M+D
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
KP+GL+F +LS CS+ GL+D+G+ F+ M+R + I+P +EHY CMV LL R+G +
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 354 EAYDIIKNMPMEPNAVILRSFLGACRNQGS--VPSLDDKLMSKLESELGANYVLTANVFS 411
+A +I+ +P EP+ +I R+ L A NQ + + + K+ + A YVL +N+++
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYA 663
Query: 412 TCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
W + +++R +MK+ G+KK PG SW+E Q
Sbjct: 664 GAKQWANVASIRKSMKEMGVKKEPGLSWIEHQ 695
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 154/336 (45%), Gaps = 5/336 (1%)
Query: 29 DHNPYLISQFLLSASTI--SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFF 86
D N + + L++A ++ S+ A++ F + + + W I+ + +SL
Sbjct: 178 DSNAF-VGAALINAYSVCGSVDSARTVFEGI-LCKDIVVWAGIVSCYVENGYFEDSLKLL 235
Query: 87 RRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADC 146
++ +G P+N+T+ ALKA + + H LKT D LL+ Y
Sbjct: 236 SCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL 295
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G + A +VF+EM VV WS MIA + + +EA+ +F MR A PN TL S+L
Sbjct: 296 GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSIL 355
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
+ C+ GE +H + + D+ + + AL ++YAKC M A+ +F + KN
Sbjct: 356 NGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEV 415
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
S+ +I N G S+F + + ++FS L AC+ + +D G
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLA 475
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
++ N K V ++D+ A+ G I+ A + M
Sbjct: 476 IKTNNAK-KVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 116/250 (46%), Gaps = 10/250 (4%)
Query: 67 NTIIRALANSPTPLESLVFFRRLQRSG--LSPDNFTYPFALKACARVSSLSHGGV---FH 121
N LA + + + RL R G L+P FT L SL + H
Sbjct: 115 NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKL-----FVSLDKAEICPWLH 169
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
S +K G S+ + L+ Y+ CG++ AR VF+ + + +V W+ +++ YV +
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
++L + MR+A PN+ T + L A + + +H I + + +G L
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
++Y + G M A VFN MP+ ++ ++ MI+ +G + + LF +M + + P+
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEF 349
Query: 302 SFSVILSACS 311
+ S IL+ C+
Sbjct: 350 TLSSILNGCA 359
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 119/282 (42%), Gaps = 43/282 (15%)
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS--ACSK---------------- 211
++ AYV + +AL++F EM + N+V+ V+L AC
Sbjct: 90 LLNAYVKAGFDKDALNLFDEM----PERNNVSFVTLAQGYACQDPIGLYSRLHREGHELN 145
Query: 212 ----------MVNVSAGE---SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
V++ E +HS I + D + +G AL Y+ CG + A VF
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFE 205
Query: 259 SMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDE 318
+ K++ + ++S +G +D + L + M G P+ +F L A +G D
Sbjct: 206 GILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 319 GKMYFDRMVRM-YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
K ++++ Y + P V G ++ L + G + +A+ + MP N V+ SF+ A
Sbjct: 266 AKGVHGQILKTCYVLDPRV-GVG-LLQLYTQLGDMSDAFKVFNEMP--KNDVVPWSFMIA 321
Query: 378 --CRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWK 417
C+N G D + E+ + N +++ + CA K
Sbjct: 322 RFCQN-GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 215/400 (53%), Gaps = 7/400 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS--PDNFTYPFALKA 107
A+ F + + L +WN +I ++ ++L F +Q + + PD FT LKA
Sbjct: 161 AEKVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 219
Query: 108 CARVSSLSHGGVFHSLTLKTGLS--SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
C+ + G H +++G S +L+ Y CG + AR+ FD++ +T++
Sbjct: 220 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 279
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+WSS+I Y EA+ +F+ ++ N + +S L S++ + + G+ + +
Sbjct: 280 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 339
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
+ + + ++ +MY KCGL+ +A F M K++ S+T++I+ G HG K +
Sbjct: 340 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 399
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
+F +M ++PD + + +LSACSH G++ EG+ F +++ + IKP VEHY C+VDL
Sbjct: 400 RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 459
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGANY 403
L RAG ++EA +I MP++PN I ++ L CR G + + K++ +++++ ANY
Sbjct: 460 LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANY 519
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
V+ +N++ W + N R KGLKK G SW+E++
Sbjct: 520 VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIE 559
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 48/417 (11%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+S+P + +W+ ++ + SL F + R G+ P+ FT+ LKAC
Sbjct: 60 AYKVFDSMP-ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACG 118
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+++L G H LK G N+L+ Y+ CG I A +VF + R++++W++
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNA 178
Query: 170 MIAAYVGSNSPSEALHVFQEMRLAN--EKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
MIA +V + S+AL F M+ AN E+P+ TL SLL ACS + AG+ IH ++ R
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 228 N--HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
+ H S + +L ++Y KCG + A F+ + EK + S++ +I G + +
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPSVEHYGCMVD 344
LF +++++ + D + S I+ + L+ +GK V++ ++ SV +VD
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVD 356
Query: 345 LLARAGLIQEAYDIIKNMPM----------------------------------EPNAVI 370
+ + GL+ EA M + EP+ V
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 371 LRSFLGACRNQGSVPSLDDKLMSKLESELG-----ANYVLTANVFSTCASWKDASNL 422
+ L AC + G + ++L SKL G +Y ++ K+A +L
Sbjct: 417 YLAVLSACSHSGMIKE-GEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 6/266 (2%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L+ C R GG H LK+G + T N L+ Y C A +VFD M R V
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
V+WS++++ +V + +L +F EM PN T + L AC + + G IH +
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ +M VE+G +L +MY+KCG + +A VF + +++L S+ MI+ + G
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKA 192
Query: 285 ISLFTQMEDMGLK--PDGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPSVEHYGC 341
+ F M++ +K PD + + +L ACS G++ GK +VR ++ S G
Sbjct: 193 LDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252
Query: 342 MVDLLARAGLI---QEAYDIIKNMPM 364
+VDL + G + ++A+D IK M
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTM 278
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 20/179 (11%)
Query: 192 LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK 251
+ N++ N LVS+L C++ G +H Y+ ++ +++ L +MY KC
Sbjct: 2 IPNQRQN---LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL 58
Query: 252 KALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS 311
A VF+SMPE+N+ S++ ++S +G K +SLF++M G+ P+ +FS L AC
Sbjct: 59 MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACG 118
Query: 312 HMGLVDEG--------KMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+ +++G K+ F+ MV + N +VD+ ++ G I EA + + +
Sbjct: 119 LLNALEKGLQIHGFCLKIGFEMMVEVGN---------SLVDMYSKCGRINEAEKVFRRI 168
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 213/400 (53%), Gaps = 7/400 (1%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC 108
F K +F+ + ++ + WN I + + +L R++ S D LKAC
Sbjct: 233 FDKMWFSGVEVS--VITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+ + ++ G H L + + NTL+ Y+ C + A VF + ++ TW+
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWN 350
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
S+I+ Y N EA H+ +EM +A +PNS+TL S+L C+++ N+ G+ H YI R
Sbjct: 351 SIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRR 410
Query: 229 HV--DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
D ++ L +L ++YAK G + A V + M +++ ++T +I GN G ++
Sbjct: 411 KCFKDYTM-LWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF +M G+KPD ++ +LSACSH LV EG+ F +M Y I+P ++H+ CMVDL
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLY 529
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS--VPSLDDKLMSKLESELGANYV 404
RAG + +A DII NMP +P+ + L AC G+ + + + +++ E YV
Sbjct: 530 GRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYV 589
Query: 405 LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
L AN+++ SW + +R M+ G+KK+PGC+W++ +
Sbjct: 590 LIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 168/403 (41%), Gaps = 37/403 (9%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+S + I PL WN +I + A + E + ++R+ G+ PD FTYP LKAC
Sbjct: 97 AQSIIENSDILHPL-PWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACG 155
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
++ G V H + S Y N L+ Y +G AR++FD M R V+W++
Sbjct: 156 ETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNA 215
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEK--------------------------------P 197
+I Y SEA +F +M + + P
Sbjct: 216 VINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFP 275
Query: 198 NSVTLVSL---LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
S+ V++ L ACS + + G+ IH + D + L MY+KC ++ AL
Sbjct: 276 TSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHAL 335
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
+VF E +L ++ +IS ++ L +M G +P+ ++ + IL C+ +
Sbjct: 336 IVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIA 395
Query: 315 LVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSF 374
+ GK + ++R K + +VD+ A++G I A + ++ + + V S
Sbjct: 396 NLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ-VSDLMSKRDEVTYTSL 454
Query: 375 LGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWK 417
+ NQG S + ++V V S C+ K
Sbjct: 455 IDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 88 RLQRSGLSPDNFTYPFA---LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYA 144
RLQ S D+ A L AC V + G H+ + +G+ L+ FY+
Sbjct: 30 RLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYS 89
Query: 145 DCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVS 204
A+ + + + + W+ +IA+Y + E + ++ M +P++ T S
Sbjct: 90 AFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPS 149
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
+L AC + ++V+ G +H I + S+ + AL MY + M A +F+ M E++
Sbjct: 150 VLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERD 209
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
S+ +I+ + G + LF +M G++ +++++I C G
Sbjct: 210 AVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 208/383 (54%), Gaps = 5/383 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ W T++ A + L+++ F+R +Q G D L+A + G H
Sbjct: 182 VICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHG 241
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+TGL + + +L+ YA G I A +VF M +T V+W S+I+ + + ++
Sbjct: 242 YLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANK 301
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
A EM+ +P+ VTLV +L ACS++ ++ G +H YI + HV V TAL +
Sbjct: 302 AFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT-ATALMD 360
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MY+KCG + + +F + K+L + MIS G HG ++V+SLF +M + ++PD +
Sbjct: 361 MYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHAT 420
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F+ +LSA SH GLV++G+ +F M+ Y I+PS +HY C++DLLARAG ++EA D+I +
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 363 PMEPNAVILRSFLGACRNQGSVPSLD---DKLMSKLESELGANYVLTANVFSTCASWKDA 419
++ I + L C N ++ D +K++ +G L +N F+T WK+
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQ-TLVSNFFATANKWKEV 539
Query: 420 SNLRLAMKQKGLKKNPGCSWLEV 442
+ +R M+ ++K PG S +EV
Sbjct: 540 AKVRKLMRNGAMEKVPGYSAIEV 562
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 155/320 (48%), Gaps = 9/320 (2%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
+ +A+ F+ LP + +N++I + P E L + ++ + PD+ T+ +
Sbjct: 65 EISYARKVFDELP-QRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
KAC L G + G +D + +++L Y CG + A +F +MA R V+
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVI 183
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
W++M+ + + +A+ ++EM+ + V ++ LL A + + G S+H Y+
Sbjct: 184 CWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
R + M+V + T+L +MYAK G ++ A VF+ M K S+ +IS +G
Sbjct: 244 YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAF 303
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY---GCM 342
+M+ +G +PD ++ +L ACS +G + G R+V Y +K V +
Sbjct: 304 EAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG-----RLVHCYILKRHVLDRVTATAL 358
Query: 343 VDLLARAGLIQEAYDIIKNM 362
+D+ ++ G + + +I +++
Sbjct: 359 MDMYSKCGALSSSREIFEHV 378
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 142/339 (41%), Gaps = 47/339 (13%)
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTG--LSSDCYTDNTLLKFY 143
F L R+ L P + ++ R H H+ + TG L+ + + +
Sbjct: 7 FCMLHRTLLCPKRIKFLQSISKLKR-----HITQIHAFVISTGNLLNGSSISRDLI---- 57
Query: 144 ADCGAIG---FARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
A CG IG +AR+VFDE+ R V ++SMI Y +P E L ++ +M +P+S
Sbjct: 58 ASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSS 117
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T + AC + + GE++ V + +++ +Y KCG M +A ++F M
Sbjct: 118 TFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKM 177
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
++++ +T M++ G + + +M++ G D + +L A +G G+
Sbjct: 178 AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGR 237
Query: 321 M---YFDR------------MVRMYNIKPSVE---------------HYGCMVDLLARAG 350
Y R +V MY +E +G ++ A+ G
Sbjct: 238 SVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNG 297
Query: 351 LIQEAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPS 386
L +A++ + M +P+ V L L AC GS+ +
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKT 336
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 210/384 (54%), Gaps = 9/384 (2%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+WN++ +A + ++ + + R PD T+ +C +L+ G + HS
Sbjct: 223 SWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHA 282
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
+ G D NT + Y+ AR +FD M RT V+W+ MI+ Y EAL
Sbjct: 283 IHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEAL 342
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS----YITRNHVDMSVELGTAL 240
+F M + EKP+ VTL+SL+S C K ++ G+ I + Y + +V + AL
Sbjct: 343 ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRD---NVMICNAL 399
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+MY+KCG + +A +F++ PEK + ++T MI+ +G + + LF++M D+ KP+
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++F +L AC+H G +++G YF M ++YNI P ++HY CMVDLL R G ++EA ++I+
Sbjct: 460 ITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIR 519
Query: 361 NMPMEPNAVILRSFLGACRNQGSVPSLDDKLMS--KLESELGANYVLTANVFSTCASWKD 418
NM +P+A I + L AC+ +V + S LE ++ A YV AN+++ W
Sbjct: 520 NMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDG 579
Query: 419 ASNLRLAMKQKGLKKNPGCSWLEV 442
+ +R MKQ+ +KK PG S ++V
Sbjct: 580 FARIRSIMKQRNIKKYPGESVIQV 603
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 139/267 (52%), Gaps = 2/267 (0%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
AWN IR N P+ESL+ FR ++R G P+NFT+PF KACAR++ + + H+
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
+K+ SD + + + C ++ +A +VF+ M R TW++M++ + S +A
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAF 138
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
+F+EMRL P+SVT+++L+ + S ++ E++H+ R VD+ V + Y
Sbjct: 139 SLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 245 AKCGLMKKALLVFNSMP--EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
KCG + A LVF ++ ++ + S+ M A G D L+ M KPD +
Sbjct: 199 GKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLST 258
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRM 329
F + ++C + + +G++ + +
Sbjct: 259 FINLAASCQNPETLTQGRLIHSHAIHL 285
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 167/373 (44%), Gaps = 8/373 (2%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
S+ +A F +P WN ++ S ++ FR ++ + ++PD+ T +
Sbjct: 102 SVDYAAKVFERMPERDAT-TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI 160
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD--EMAVRT 163
++ + SL H++ ++ G+ NT + Y CG + A+ VF+ + RT
Sbjct: 161 QSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRT 220
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
VV+W+SM AY +A ++ M KP+ T ++L ++C ++ G IHS
Sbjct: 221 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHS 280
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
+ D +E MY+K A L+F+ M + S+T+MIS G +
Sbjct: 281 HAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDE 340
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIK-PSVEHYGCM 342
++LF M G KPD ++ ++S C G ++ GK + D +Y K +V +
Sbjct: 341 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNVMICNAL 399
Query: 343 VDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSK-LESELGA 401
+D+ ++ G I EA DI N P + G N + +L KL SK ++ +
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL--KLFSKMIDLDYKP 457
Query: 402 NYVLTANVFSTCA 414
N++ V CA
Sbjct: 458 NHITFLAVLQACA 470
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%)
Query: 153 RQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKM 212
R+++ + +V W+ I V N P E+L +F+EM+ +PN+ T + AC+++
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 213 VNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMI 272
+V E +H+++ ++ V +GTA +M+ KC + A VF MPE++ ++ M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 273 SALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS 311
S G SLF +M + PD ++ ++ + S
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 206/395 (52%), Gaps = 4/395 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P L WN +I L E L FR + G SPD +T A
Sbjct: 44 ARKVFDEMP-DRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSA 102
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ S+S G H T+K GL D +++L Y G + V M VR +V W++
Sbjct: 103 GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNT 162
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I + P L++++ M+++ +PN +T V++LS+CS + G+ IH+ +
Sbjct: 163 LIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG 222
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
V + ++L MY+KCG + A F+ +++ ++ MISA G HG + I LF
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 282
Query: 290 QM-EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M E ++ + ++F +L ACSH GL D+G FD MV Y KP ++HY C+VDLL R
Sbjct: 283 TMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGR 342
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGAC--RNQGSVPSLDDKLMSKLESELGANYVLT 406
AG + +A II++MP++ + VI ++ L AC + K + +++ A YVL
Sbjct: 343 AGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLL 402
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
ANV ++ W+D S +R +M+ K +KK G SW E
Sbjct: 403 ANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 107/195 (54%)
Query: 135 TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
+ N L+ Y G + AR+VFDEM R + TW++MIA + E L +F+EM
Sbjct: 27 SSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLG 86
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
P+ TL S+ S + + +VS G+ IH Y + +++ + + ++L MY + G ++
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
+V SMP +NL ++ +I +GC + V+ L+ M+ G +P+ ++F +LS+CS +
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 315 LVDEGKMYFDRMVRM 329
+ +G+ +++
Sbjct: 207 IRGQGQQIHAEAIKI 221
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 134/427 (31%), Positives = 211/427 (49%), Gaps = 39/427 (9%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F +P P + ++N +I A LE+L + ++ G+ PD +T L C
Sbjct: 185 AEKVFARMP-HPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCG 243
Query: 110 RVSSLSHGGVFHSLTLKTG--LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
+S + G H + G SS+ N LL Y C G A++ FD M + + +W
Sbjct: 244 HLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSW 303
Query: 168 SSMIAAYVGSNSPSEALHVFQEM----------------------RLANE---------- 195
++M+ +V A VF +M R E
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363
Query: 196 -KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
KP+ VT+VSL+S + +S G +H + R + L +AL +MY KCG++++A
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF 423
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
+VF + EK++ +T MI+ L HG + + LF +M++ G+ P+ ++ +L+ACSH G
Sbjct: 424 MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
Query: 315 LVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII-KNMPMEPNAVILRS 373
LV+EG F+ M + P EHYG +VDLL RAG ++EA DI+ K MPM P+ + S
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGS 543
Query: 374 FLGACRNQGSVPSLDDKLMS--KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGL 431
L ACR + + + L KLE E YVL +N+++T W + R AM+ +G+
Sbjct: 544 ILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGV 603
Query: 432 KKNPGCS 438
KK G S
Sbjct: 604 KKTAGYS 610
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 164/351 (46%), Gaps = 42/351 (11%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
+L AK F + P +F +NT+I A+++S E + + R +SPD T+ + +
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLM 140
Query: 106 KACARVSSLSHGGVFHSLTLKTG-LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
KA + +S + H + +G LS Y N+L+KFY + G G A +VF M V
Sbjct: 141 KASSFLSEVKQ---IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDV 197
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+++ MI Y EAL ++ +M +P+ T++SLL C + ++ G+ +H +
Sbjct: 198 SSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW 257
Query: 225 ITRNH--VDMSVELGTALFEMYAKC-------------------------------GLMK 251
I R ++ L AL +MY KC G M+
Sbjct: 258 IERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDME 317
Query: 252 KALLVFNSMPEKNLQSFTIMISALGNHGC-QKDVISLFTQMEDM-GLKPDGLSFSVILSA 309
A VF+ MP+++L S+ ++ GC Q+ V LF +M + +KPD ++ ++S
Sbjct: 318 AAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISG 377
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++ G + G+ ++R+ +K ++D+ + G+I+ A+ + K
Sbjct: 378 AANNGELSHGRWVHGLVIRL-QLKGDAFLSSALIDMYCKCGIIERAFMVFK 427
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 100/219 (45%), Gaps = 14/219 (6%)
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
V +++MI+A S+S +E ++ M P+ T + L+ A S + V + IH
Sbjct: 100 VFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHC 154
Query: 224 YI-TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK 282
+I + + L +L + Y + G A VF MP ++ SF +MI G
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK---MYFDRMVRMYNIKPSVEHY 339
+ + L+ +M G++PD + +L C H+ + GK + +R +Y+ + +
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSN- 273
Query: 340 GCMVDLLAR---AGLIQEAYDIIKNMPMEPNAVILRSFL 375
++D+ + +GL + A+D +K M ++ F+
Sbjct: 274 -ALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFV 311
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 188/327 (57%), Gaps = 10/327 (3%)
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSN 178
+F +T KT + T T++ Y + I AR++FD M R +V+W++MI Y +
Sbjct: 198 LFDEMTHKTVI-----TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNK 252
Query: 179 SPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
P E + +FQEM+ P+ VT++S+L A S +S GE H ++ R +D V++
Sbjct: 253 QPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVC 312
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLK 297
TA+ +MY+KCG ++KA +F+ MPEK + S+ MI +G + + LF M + K
Sbjct: 313 TAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM-IEEK 371
Query: 298 PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYD 357
PD ++ +++AC+H GLV+EG+ +F M M + +EHYGCMVDLL RAG ++EA D
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLKEAED 430
Query: 358 IIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMS--KLESELGANYVLTANVFSTCAS 415
+I NMP EPN +IL SFL AC + + L +LE + NYVL N+++
Sbjct: 431 LITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKR 490
Query: 416 WKDASNLRLAMKQKGLKKNPGCSWLEV 442
W D ++ M++ KK GCS +E+
Sbjct: 491 WDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 160/336 (47%), Gaps = 11/336 (3%)
Query: 31 NPYLISQFL-LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL 89
N + ++FL +SAS + + +A+ F+ P F N++I+A + +S +R L
Sbjct: 9 NVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDL 68
Query: 90 QR-SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
++ + +PDNFT+ K+C+ + G HS + G +D Y ++ YA G
Sbjct: 69 RKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGK 128
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+G AR FDEM R+ V+W+++I+ Y+ A +F +M + V +++
Sbjct: 129 MGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDG 185
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
K ++++ + +T +V T + Y + A +F++MPE+NL S+
Sbjct: 186 FVKSGDMTSARRLFDEMTHK----TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSW 241
Query: 269 TIMISALGNHGCQKDVISLFTQME-DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
MI + ++ I LF +M+ L PD ++ +L A S G + G+ + V
Sbjct: 242 NTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE-WCHCFV 300
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
+ + V+ ++D+ ++ G I++A I MP
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP 336
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 37/281 (13%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQ-RSGLSPDNFTYPFALKAC 108
A+ F+++P L +WNT+I + P E + F+ +Q + L PD+ T L A
Sbjct: 226 ARKLFDAMP-ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAI 284
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+ +LS G H + L +L Y+ CG I A+++FDEM + V +W+
Sbjct: 285 SDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWN 344
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+MI Y + + AL +F M + EKP+ +T++++++AC N
Sbjct: 345 AMIHGYALNGNARAALDLFVTM-MIEEKPDEITMLAVITAC------------------N 385
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
H + VE G F + + GL K ++ + M+ LG G K+ L
Sbjct: 386 HGGL-VEEGRKWFHVMREMGLNAK------------IEHYGCMVDLLGRAGSLKEAEDLI 432
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
T +M +P+G+ S LSAC ++ + + V +
Sbjct: 433 T---NMPFEPNGIILSSFLSACGQYKDIERAERILKKAVEL 470
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 12/237 (5%)
Query: 148 AIGFARQVFDEMAVRTVVTWS-SMIAAYVGSNSPSEALHVFQEMRLAN-EKPNSVTLVSL 205
IG+AR++FD+ R S SMI AY+ + ++ +++++R P++ T +L
Sbjct: 25 GIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTL 84
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
+CS + V G +HS I R + + T + +MYAK G M A F+ MP ++
Sbjct: 85 TKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSE 144
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
S+T +IS G LF QM + D + ++ ++ G + + FD
Sbjct: 145 VSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDE 201
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA-CRNQ 381
M +V + M+ I A + MP E N V + +G C+N+
Sbjct: 202 MTH-----KTVITWTTMIHGYCNIKDIDAARKLFDAMP-ERNLVSWNTMIGGYCQNK 252
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 220/400 (55%), Gaps = 7/400 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+SLP + + N +I + + E++V F+ + G++P T+ ++AC
Sbjct: 583 ARKVFSSLP-EWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDC-YTDNTLLKFYADCGAIGFARQVFDEMAV-RTVVTW 167
+ SL+ G FH K G SS+ Y +LL Y + + A +F E++ +++V W
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
+ M++ + + EAL ++EMR P+ T V++L CS + ++ G +IHS I
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK-NLQSFTIMISALGNHGCQKDVIS 286
D+ L +MYAKCG MK + VF+ M + N+ S+ +I+ +G +D +
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
+F M + PD ++F +L+ACSH G V +G+ F+ M+ Y I+ V+H CMVDLL
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS--VPSLDDKLMSKLESELGANYV 404
R G +QEA D I+ ++P+A + S LGACR G + + + +LE + + YV
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYV 940
Query: 405 LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
L +N++++ W+ A+ LR M+ +G+KK PG SW++V+
Sbjct: 941 LLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQ 980
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 143/261 (54%), Gaps = 2/261 (0%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F +L +F WN +IR A++ + + F ++ SG + D+FT+ L CA
Sbjct: 381 AAKVFEALEEKNDVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
L G FHS+ +K L+ + + N L+ YA CGA+ ARQ+F+ M R VTW++
Sbjct: 440 ASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNT 499
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I +YV + SEA +F+ M L + L S L AC+ + + G+ +H +
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+D + G++L +MY+KCG++K A VF+S+PE ++ S +I+ + ++ V+ LF
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQ 618
Query: 290 QMEDMGLKPDGLSFSVILSAC 310
+M G+ P ++F+ I+ AC
Sbjct: 619 EMLTRGVNPSEITFATIVEAC 639
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 160/321 (49%), Gaps = 10/321 (3%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ F + +P + AWN +I ++ +F +++S + T L
Sbjct: 277 LKDARLLFGEMS-SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
A V++L G V H+ +K GL+S+ Y ++L+ Y+ C + A +VF+ + + V
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W++MI Y + + + +F +M+ + + T SLLS C+ ++ G HS I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+ + ++ +G AL +MYAKCG ++ A +F M +++ ++ +I + + +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVE---HYG-CM 342
LF +M G+ DG + L AC+H+ + +GK V ++K ++ H G +
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK-----QVHCLSVKCGLDRDLHTGSSL 570
Query: 343 VDLLARAGLIQEAYDIIKNMP 363
+D+ ++ G+I++A + ++P
Sbjct: 571 IDMYSKCGIIKDARKVFSSLP 591
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 153/324 (47%), Gaps = 14/324 (4%)
Query: 113 SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
+L G HS +L G+ S+ N ++ YA C + +A + FD + + V W+SM++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
Y P + L F + PN T +LS C++ NV G IH + + ++
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
+ G AL +MYAKC + A VF + + N +T + S G ++ + +F +M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
D G +PD L+F +++ +G + + ++ F M P V + M+ + G
Sbjct: 254 DEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCE 308
Query: 353 QEAYDIIKNMPMEPNAVILRSFLGACRNQ-GSVPSLDDKLMSKLES---ELGAN-YVLTA 407
A + NM + + RS LG+ + G V +LD L+ E+ L +N YV ++
Sbjct: 309 TVAIEYFFNMR-KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 408 --NVFSTCASWKDASNLRLAMKQK 429
+++S C + A+ + A+++K
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEK 391
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 165/398 (41%), Gaps = 42/398 (10%)
Query: 40 LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNF 99
L A + +A+ F+ L + AWN+++ ++ P + L F L + + P+ F
Sbjct: 104 LYAKCAQVSYAEKQFDFLE--KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKF 161
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
T+ L CAR +++ G H +K GL + Y L+ YA C I AR+VF+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
V W+ + + YV + P EA+ VF+ MR +P+ + V++++
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT----------- 270
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
Y + G +K A L+F M ++ ++ +MIS G G
Sbjct: 271 ------------------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
C+ I F M +K + +LSA + +D G + +++ + ++
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL-GLASNIYVG 365
Query: 340 GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESEL 399
+V + ++ ++ A + + + E N V + + + G + + M S
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALE-EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 400 GANYVLTANVFSTCASWKD---ASNLRLAMKQKGLKKN 434
+ ++ STCA+ D S + +K L KN
Sbjct: 425 NIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 36/309 (11%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P W + + P E+++ F R++ G PD+ +
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFV---------------- 265
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSN 178
T++ Y G + AR +F EM+ VV W+ MI+ +
Sbjct: 266 -------------------TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 179 SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
+ A+ F MR ++ K TL S+LSA + N+ G +H+ + + ++ +G+
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP 298
+L MY+KC M+ A VF ++ EKN + MI ++G V+ LF M+ G
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
D +F+ +LS C+ ++ G + +++ + ++ +VD+ A+ G +++A I
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-KLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 359 IKNMPMEPN 367
+ M N
Sbjct: 486 FERMCDRDN 494
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 189/301 (62%), Gaps = 3/301 (0%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANE 195
N ++ YA G + A++VFD M VR VV+W++M+ AY +E L VF +M + E
Sbjct: 241 NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE 300
Query: 196 KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALL 255
KP+ TLVS+LSAC+ + ++S GE +H YI ++ +++ L TAL +MY+KCG + KAL
Sbjct: 301 KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALE 360
Query: 256 VFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
VF + ++++ ++ +IS L HG KD + +F++M G KP+G++F +LSAC+H+G+
Sbjct: 361 VFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGM 420
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
+D+ + F+ M +Y ++P++EHYGCMVDLL R G I+EA +++ +P + +++L S L
Sbjct: 421 LDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLL 480
Query: 376 GACRNQGSVPSLDDKLMSKLESEL--GANYVLTANVFSTCASWKDASNLRLAMKQKGLKK 433
GAC+ G + + LE L + Y +N++++ W+ + R M+ + + +
Sbjct: 481 GACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Query: 434 N 434
+
Sbjct: 541 S 541
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 165/340 (48%), Gaps = 54/340 (15%)
Query: 30 HNPYLISQFLLSASTISLP----FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVF 85
H+ + S+ + A+T P +A S N + +P F N++IRA ANS TP +L
Sbjct: 69 HDTFSASKLVAFAATNPEPKTVSYAHSILNRIG-SPNGFTHNSVIRAYANSSTPEVALTV 127
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
FR + + PD +++ F LKACA G H L +K+GL +D + +NTL+ Y
Sbjct: 128 FREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGR 187
Query: 146 CGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
G AR+V D M VR V+W+S+++AY+ EA +F EM N
Sbjct: 188 SGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERN----------- 236
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
VE + YA GL+K+A VF+SMP +++
Sbjct: 237 ----------------------------VESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 266 QSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFD 324
S+ M++A + GC +V+ +F +M +D KPDG + +LSAC+ +G + +G+
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE---- 324
Query: 325 RMVRMYNIKPSVEHYG----CMVDLLARAGLIQEAYDIIK 360
V +Y K +E G +VD+ ++ G I +A ++ +
Sbjct: 325 -WVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFR 363
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 207/385 (53%), Gaps = 4/385 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +W ++I A ++++ F +++ S + P+ T+ ACA +S L G H
Sbjct: 275 VVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L GL+ N+++K Y+ CG + A +F M R +++WS++I Y + E
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
F MR + KP L SLLS M + G +H+ ++ + + ++L
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MY+KCG +K+A ++F ++ S T MI+ HG K+ I LF + +G +PD ++
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F +L+AC+H G +D G YF+ M YN++P+ EHYGCMVDLL RAG + +A +I M
Sbjct: 515 FISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM 574
Query: 363 PMEPNAVILRSFLGACRNQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDA 419
+ + V+ + L AC+ +G + ++++ +L+ V AN++S+ + ++A
Sbjct: 575 SWKKDDVVWTTLLIACKAKGDIERGRRAAERIL-ELDPTCATALVTLANIYSSTGNLEEA 633
Query: 420 SNLRLAMKQKGLKKNPGCSWLEVQN 444
+N+R MK KG+ K PG S +++++
Sbjct: 634 ANVRKNMKAKGVIKEPGWSSIKIKD 658
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 148/287 (51%), Gaps = 7/287 (2%)
Query: 29 DHNPYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFR- 87
D N +L S L++A +L A+ F+ +P + +W +II+ + E+L+ F
Sbjct: 42 DPNSHLRS--LINAG--NLRAARQVFDKMP-HGDIVSWTSIIKRYVTANNSDEALILFSA 96
Query: 88 -RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADC 146
R+ +SPD LKAC + S++++G H+ +KT L S Y ++LL Y
Sbjct: 97 MRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRV 156
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G I + +VF EM R VTW+++I V + E L F EM + E ++ T L
Sbjct: 157 GKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIAL 216
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
AC+ + V G++IH+++ ++ + +L MY +CG M+ L +F +M E+++
Sbjct: 217 KACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVV 276
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
S+T +I A G + + F +M + + P+ +F+ + SAC+ +
Sbjct: 277 SWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 166/364 (45%), Gaps = 34/364 (9%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F+ +P + W II L ++ E L +F + RS D +T+ ALKACA +
Sbjct: 166 FSEMPFRNAV-TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQ 224
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
+ +G H+ + G + N+L Y +CG + +F+ M+ R VV+W+S+I A
Sbjct: 225 VKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVA 284
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
Y +A+ F +MR + PN T S+ SAC+ + + GE +H + ++ S
Sbjct: 285 YKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDS 344
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
+ + ++ +MY+ CG + A ++F M +++ S++ +I G ++ F+ M
Sbjct: 345 LSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQ 404
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYF---------------DRMVRMY----NIKP 334
G KP + + +LS +M +++ G+ ++ MY +IK
Sbjct: 405 SGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKE 464
Query: 335 SVEHYG-----------CMVDLLARAGLIQEAYDIIK---NMPMEPNAVILRSFLGACRN 380
+ +G M++ A G +EA D+ + + P++V S L AC +
Sbjct: 465 ASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTH 524
Query: 381 QGSV 384
G +
Sbjct: 525 SGQL 528
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 150/282 (53%), Gaps = 6/282 (2%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE- 195
N+ L+ + G + ARQVFD+M +V+W+S+I YV +N+ EAL +F MR+ +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 196 -KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
P++ L +L AC + N++ GES+H+Y + + SV +G++L +MY + G + K+
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
VF+ MP +N ++T +I+ L + G K+ ++ F++M D +F++ L AC+ +
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 315 LVDEGK-MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRS 373
V GK ++ +VR + V + + + G +Q+ + +NM E + V S
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVAN--SLATMYTECGEMQDGLCLFENMS-ERDVVSWTS 280
Query: 374 FLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCAS 415
+ A + G + + S++ N A++FS CAS
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACAS 322
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 223/406 (54%), Gaps = 16/406 (3%)
Query: 44 TISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYP 102
++ A+SFF+ +P +WNT+I A ++ +F+ ++++ +S +
Sbjct: 137 NVNFEKAQSFFDRMPFKDAA-SWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISG 195
Query: 103 FALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV- 161
+ C + SH F + G+ + +T ++ Y + A +F +M V
Sbjct: 196 YI--ECGDLEKASH---FFKVAPVRGVVA--WT--AMITGYMKAKKVELAEAMFKDMTVN 246
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
+ +VTW++MI+ YV ++ P + L +F+ M +PNS L S L CS++ + G I
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
H ++++ + V T+L MY KCG + A +F M +K++ ++ MIS HG
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 282 KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC 341
+ LF +M D ++PD ++F +L AC+H GLV+ G YF+ MVR Y ++P +HY C
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 426
Query: 342 MVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD---DKLMSKLESE 398
MVDLL RAG ++EA +I++MP P+A + + LGACR +V + +KL+ +L S+
Sbjct: 427 MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL-QLNSQ 485
Query: 399 LGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
A YV AN++++ W+D + +R MK+ + K PG SW+E++N
Sbjct: 486 NAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRN 531
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 10/232 (4%)
Query: 132 DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR 191
D ++ N +L Y A+ FD M + +W++MI Y +A +F M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 192 LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK 251
NE VS + S + E + V V TA+ Y K ++
Sbjct: 183 EKNE-------VSWNAMISGYIECGDLEKASHFFKVAPV-RGVVAWTAMITGYMKAKKVE 234
Query: 252 KALLVFNSMP-EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
A +F M KNL ++ MIS + +D + LF M + G++P+ S L C
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
S + + G+ ++V + V ++ + + G + +A+ + + M
Sbjct: 295 SELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/433 (30%), Positives = 231/433 (53%), Gaps = 22/433 (5%)
Query: 31 NPYLISQFLLSASTISLP-------FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESL 83
N Y IS+ L + + LP +A S F+S+ I P F ++T+IR + S P L
Sbjct: 42 NTYAISKLL--TAFLHLPNLNKHFHYASSIFDSIEI-PNSFVYDTMIRICSRSSQPHLGL 98
Query: 84 VFFR---RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLS-SDCYTDNTL 139
+F + + ++P T+ F + AC + S G H +K G+ SD + +
Sbjct: 99 RYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGV 158
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
L+ Y + + AR+VFDE+ VV W ++ YV SE L VF+EM + +P+
Sbjct: 159 LRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDE 218
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTALFEMYAKCGLMKKALLVFN 258
++ + L+AC+++ ++ G+ IH ++ + ++ V +GTAL +MYAKCG ++ A+ VF
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE 278
Query: 259 SMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DMGLKPDGLSFSVILSACSHMGLVD 317
+ +N+ S+ +I +G K + ++E + G+KPD + +L+AC+H G ++
Sbjct: 279 KLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 318 EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
EG+ + M Y I P EHY C+VDL+ RAG + +A D+I+ MPM+P A + + L
Sbjct: 339 EGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Query: 378 CRNQGSVPSLDDKLMSKLESELG------ANYVLTANVFSTCASWKDASNLRLAMKQKGL 431
CR +V + + + L+ E G A V +N++ + +A +R ++Q+G+
Sbjct: 399 CRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI 458
Query: 432 KKNPGCSWLEVQN 444
+K PG S LEV
Sbjct: 459 RKTPGWSLLEVDG 471
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 226 bits (576), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 213/386 (55%), Gaps = 4/386 (1%)
Query: 63 LFAWNTIIRA-LANSPTPLESLVFFRRLQRSG-LSPDNFTYPFALKACARVSSLSHGGVF 120
+ +W +I + N E++ F + G + P++FT+ A KAC +S G
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
K GL+S+ N+++ + + A++ F+ ++ + +V++++ + + +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+A + E+ ++ T SLLS + + ++ GE IHS + + + + + AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
MY+KCG + A VFN M +N+ S+T MI+ HG V+ F QM + G+KP+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
+++ ILSACSH+GLV EG +F+ M + IKP +EHY CMVDLL RAGL+ +A++ I
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 361 NMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKD 418
MP + + ++ R+FLGACR + + L + + +L+ A Y+ +N+++ W++
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 419 ASNLRLAMKQKGLKKNPGCSWLEVQN 444
++ +R MK++ L K GCSW+EV +
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGD 721
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 182/363 (50%), Gaps = 17/363 (4%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +W+ ++ N+ L+++ F GL P+++ Y ++AC+ + G V
Sbjct: 131 VVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLG 190
Query: 123 LTLKTG-LSSDCYTDNTLLKFYADCGAIGF--ARQVFDEMAVRTVVTWSSMIAAYVGSNS 179
+KTG SD +L+ + G F A +VFD+M+ VVTW+ MI +
Sbjct: 191 FLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGF 249
Query: 180 PSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTA 239
P EA+ F +M L+ + + TL S+ SAC+++ N+S G+ +HS+ R+ + VE +
Sbjct: 250 PREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE--CS 307
Query: 240 LFEMYAKC---GLMKKALLVFNSMPEKNLQSFTIMISA-LGNHGCQKDVISLFTQMEDMG 295
L +MYAKC G + VF+ M + ++ S+T +I+ + N + I+LF++M G
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
Query: 296 -LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
++P+ +FS AC ++ GK + + + + ++ + ++ +++
Sbjct: 368 HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVISMFVKSDRMED 426
Query: 355 AYDIIKNMPMEPNAVILRSFL-GACRNQGSVPSLDDKLMSKL-ESELGANYVLTANVFST 412
A +++ E N V +FL G CRN + KL+S++ E ELG + A++ S
Sbjct: 427 AQRAFESLS-EKNLVSYNTFLDGTCRNLNFEQAF--KLLSEITERELGVSAFTFASLLSG 483
Query: 413 CAS 415
A+
Sbjct: 484 VAN 486
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 159/362 (43%), Gaps = 22/362 (6%)
Query: 89 LQRSGLSP-DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG 147
+ R G+ P D+ T+ LK+C R G + H+ ++ + D N+L+ Y+ G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 148 AIGFARQVFDEM---AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVS 204
A VF+ M R VV+WS+M+A Y + +A+ VF E PN +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 205 LLSACSKMVNVSAGESIHSYITRN-HVDMSVELGTALFEMYAKC-GLMKKALLVFNSMPE 262
++ ACS V G ++ + H + V +G +L +M+ K + A VF+ M E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 263 KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMY 322
N+ ++T+MI+ G ++ I F M G + D + S + SAC+ + + GK
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 323 FDRMVRMYNIKPSVEHYGC-MVDLLARAGL------IQEAYDIIKNMPMEPNAVILRSFL 375
+R V+ C +VD+ A+ ++ +D +++ + ++ ++
Sbjct: 292 HSWAIR----SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 376 GACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQ---KGLK 432
C +L +++++ E N+ ++ F C + D + + Q +GL
Sbjct: 348 KNCNLATEAINLFSEMITQGHVE--PNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA 405
Query: 433 KN 434
N
Sbjct: 406 SN 407
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 126/257 (49%), Gaps = 18/257 (7%)
Query: 198 NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVF 257
+SVT SLL +C + + G+ +H+ + ++ L +L +Y+K G KA VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 258 NSMP---EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
+M ++++ S++ M++ GN+G + D I +F + ++GL P+ ++ ++ ACS+
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 315 LVDEGKMYFDRMVRMYNIKPSVEHYGC-MVDLLARA-GLIQEAYDIIKNMPMEPNAVILR 372
V G++ +++ + + V GC ++D+ + + AY + M E N V
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWT 238
Query: 373 SFLGACRNQG----SVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDAS---NLRLA 425
+ C G ++ D ++S ES+ + L++ VFS CA ++ S L
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESD---KFTLSS-VFSACAELENLSLGKQLHSW 294
Query: 426 MKQKGLKKNPGCSWLEV 442
+ GL + CS +++
Sbjct: 295 AIRSGLVDDVECSLVDM 311
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 233/431 (54%), Gaps = 22/431 (5%)
Query: 31 NPYLISQFLLSASTISLP-------FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESL 83
N Y IS+ L + + LP +A S F+S+ I P F ++T+IR + S P L
Sbjct: 42 NTYAISKLL--TAFLHLPNLNKHFHYASSIFDSIEI-PNSFVYDTMIRICSRSSQPHLGL 98
Query: 84 VFFR---RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLS-SDCYTDNTL 139
+F + + ++P T+ F + AC + S G H +K G+ SD + +
Sbjct: 99 RYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGV 158
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
L+ Y + + AR+VFDE+ VV W ++ YV SE L VF+EM + +P+
Sbjct: 159 LRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDE 218
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTALFEMYAKCGLMKKALLVFN 258
++ + L+AC+++ ++ G+ IH ++ + ++ V +GTAL +MYAKCG ++ A+ VF
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFK 278
Query: 259 SMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DMGLKPDGLSFSVILSACSHMGLVD 317
+ +N+ S+ +I +G K ++ ++E + G+KPD + +L+AC+H G ++
Sbjct: 279 KLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 318 EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
EG+ + M Y I P EHY C+VDL+ RAG + +A ++I+ MPM+P A + + L
Sbjct: 339 EGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Query: 378 CRNQGSVPSLDDKLMSKLESELG------ANYVLTANVFSTCASWKDASNLRLAMKQKGL 431
CR +V + + + L+ E G A V +N++ + +AS +R ++Q+G+
Sbjct: 399 CRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGV 458
Query: 432 KKNPGCSWLEV 442
+K PG S LEV
Sbjct: 459 RKTPGWSVLEV 469
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 217/398 (54%), Gaps = 27/398 (6%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ AW ++I N+ +++ FR +Q +G+ + L AC R + G FH
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 123 LTLKTGLSSDCYTDN----------TLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
GL D Y + +L+ YA CG + AR +FD M RT+V+W+S+I
Sbjct: 233 FL--QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIIT 290
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA-----CSKMVNVSAGESIHSYITR 227
Y + EAL +F +M P+ VT +S++ A CS++ G+SIH+Y+++
Sbjct: 291 GYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL-----GQSIHAYVSK 345
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ AL MYAK G + A F + +K+ ++T++I L +HG + +S+
Sbjct: 346 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSI 405
Query: 288 FTQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
F +M++ G PDG+++ +L ACSH+GLV+EG+ YF M ++ ++P+VEHYGCMVD+L
Sbjct: 406 FQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDIL 465
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLE--SELGAN-Y 403
+RAG +EA ++K MP++PN I + L C ++ L D++ S + ELG+ Y
Sbjct: 466 SRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENL-ELTDRIRSMVAEPEELGSGIY 524
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
VL +N+++ W D +R +MK K + K G S +E
Sbjct: 525 VLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 164/285 (57%), Gaps = 14/285 (4%)
Query: 43 STISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYP 102
T++L +A+S F S+ P ++ WN++IR +NSP P ++L+F++ + R G SPD FT+P
Sbjct: 53 ETMNLSYARSVFESID-CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFP 111
Query: 103 FALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR 162
+ LKAC+ + + G H +KTG + Y LL Y CG + + +VF+++
Sbjct: 112 YVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQW 171
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
VV W S+I+ +V +N S+A+ F+EM+ K N +V LL AC + ++ G+ H
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231
Query: 223 SYIT--------RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA 274
++ ++ V +V L T+L +MYAKCG ++ A +F+ MPE+ L S+ +I+
Sbjct: 232 GFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITG 291
Query: 275 LGNHGCQKDVISLFTQMEDMGLKPDGLSF-SVI----LSACSHMG 314
+G ++ + +F M D+G+ PD ++F SVI + CS +G
Sbjct: 292 YSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA---IGFARQVFDEMAV 161
L+ C + L+ H L +K+ + + + L+ F C + +AR VF+ +
Sbjct: 13 LENCRSLVELNQ---LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
+V W+SMI Y S +P +AL +QEM P+ T +L ACS + ++ G +
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
H ++ + ++++ + T L MY CG + L VF +P+ N+ ++ +IS N+
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 282 KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY-- 339
D I F +M+ G+K + +L AC + GK +F ++ P +
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK-WFHGFLQGLGFDPYFQSKVG 248
Query: 340 ------GCMVDLLARAGLIQEAYDIIKNMP 363
++D+ A+ G ++ A + MP
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLFDGMP 278
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 102/219 (46%), Gaps = 3/219 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ F+ +P L +WN+II + + E+L F + G++PD T+ ++
Sbjct: 267 LRTARYLFDGMP-ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
A G H+ KTG D L+ YA G A++ F+++ + +
Sbjct: 326 ASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA 385
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMR-LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
W+ +I +EAL +FQ M+ N P+ +T + +L ACS + V G+ + +
Sbjct: 386 WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 445
Query: 226 TRNH-VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
H ++ +VE + ++ ++ G ++A + +MP K
Sbjct: 446 RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK 484
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 222/429 (51%), Gaps = 37/429 (8%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR-LQRSGLSPDNFTYPFALKAC 108
A+ F+ + + +WN++I + S + + ++ L S P+ T +AC
Sbjct: 186 ARKVFDEMS-ERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQAC 244
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT-- 166
+ S L G H ++ + D N ++ FYA CG++ +AR +FDEM+ + VT
Sbjct: 245 GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 167 -----------------------------WSSMIAAYVGSNSPSEALHVFQEMRLANEKP 197
W++MI+ + +N E ++ F+EM +P
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRP 364
Query: 198 NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVF 257
N+VTL SLL + + N+ G+ IH++ RN D ++ + T++ + YAK G + A VF
Sbjct: 365 NTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 258 NSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVD 317
++ +++L ++T +I+A HG SLF QM+ +G KPD ++ + +LSA +H G D
Sbjct: 425 DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 318 EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
+ FD M+ Y+I+P VEHY CMV +L+RAG + +A + I MP++P A + + L
Sbjct: 485 MAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
Query: 378 CRNQGSVPSLD---DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKN 434
G + D+L ++E E NY + AN+++ W++A +R MK+ GLKK
Sbjct: 545 ASVLGDLEIARFACDRLF-EMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKI 603
Query: 435 PGCSWLEVQ 443
PG SW+E +
Sbjct: 604 PGTSWIETE 612
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 8/237 (3%)
Query: 96 PDNFTYPFALKACARVSSLSHGGV---FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFA 152
PD+ + LKA + G + H ++ G SD + N ++ +Y C I A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 153 RQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSK 211
R+VFDEM+ R VV+W+SMI+ Y S S + +++ M ++ KPN VT++S+ AC +
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
++ G +H + NH+ M + L A+ YAKCG + A +F+ M EK+ ++ +
Sbjct: 247 SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAI 306
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
IS HG K+ ++LF++ME +GL S ++ H +++ F M+R
Sbjct: 307 ISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINS----FREMIR 359
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 10/203 (4%)
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNS 179
H+ + + D + + L+ FY A VFDE+ VR ++++++ AY
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 180 PSEALHVFQEMRLAN------EKPNSVTL---VSLLSACSKMVNVSAGESIHSYITRNHV 230
+A +F ++ +P+S+++ + LS C S +H ++ R
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQ 290
D V +G + Y KC ++ A VF+ M E+++ S+ MIS G +D ++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 291 MEDMG-LKPDGLSFSVILSACSH 312
M KP+G++ + AC
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQ 246
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 217/400 (54%), Gaps = 8/400 (2%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL-QRSGLSPDNFTYPFAL 105
+ +A+ FN + I + AWN +I A + ++ + F+++ +++GL PD T L
Sbjct: 283 VSYAERIFNGM-IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL 341
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
A S++ G H ++ G + L+ Y +CG + A +FD MA + V+
Sbjct: 342 PA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVI 397
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+W+S+IAAYV + AL +FQE+ ++ P+S T+ S+L A ++ +++S G IH+YI
Sbjct: 398 SWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYI 457
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
++ + + +L MYA CG ++ A FN + K++ S+ +I A HG + +
Sbjct: 458 VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISV 517
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
LF++M + P+ +F+ +L+ACS G+VDEG YF+ M R Y I P +EHYGCM+DL
Sbjct: 518 WLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDL 577
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG--SVPSLDDKLMSKLESELGANY 403
+ R G A ++ MP P A I S L A RN ++ + + K+E + Y
Sbjct: 578 IGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCY 637
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
VL N+++ W+D + ++L M+ KG+ + S +E +
Sbjct: 638 VLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAK 677
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 164/321 (51%), Gaps = 8/321 (2%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
F WN +I+ + +E++ F+ R+ +G+ D FTYPF +K+ A +SSL G H++
Sbjct: 96 FLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAM 155
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
+K G SD Y N+L+ Y G A +VF+EM R +V+W+SMI+ Y+ +
Sbjct: 156 VIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSS 215
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS-VELGTALFE 242
L +F+EM KP+ + +S L ACS + + G+ IH + R+ ++ V + T++ +
Sbjct: 216 LMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILD 275
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPDGL 301
MY+K G + A +FN M ++N+ ++ +MI +G D F +M E GL+PD +
Sbjct: 276 MYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVI 335
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
+ +L A + + EG+ +R P + ++D+ G ++ A I
Sbjct: 336 TSINLLPASA----ILEGRTIHGYAMRR-GFLPHMVLETALIDMYGECGQLKSAEVIFDR 390
Query: 362 MPMEPNAVILRSFLGACRNQG 382
M E N + S + A G
Sbjct: 391 MA-EKNVISWNSIIAAYVQNG 410
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 138/273 (50%), Gaps = 7/273 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F +P + +WN++I SL+ F+ + + G PD F+ AL AC+
Sbjct: 184 AEKVFEEMP-ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 110 RVSSLSHGGVFHSLTLKTGLSS-DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
V S G H +++ + + D ++L Y+ G + +A ++F+ M R +V W+
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
MI Y + ++A FQ+M N +P+ +T ++LL A + + G +IH Y R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR 358
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ L TAL +MY +CG +K A ++F+ M EKN+ S+ +I+A +G + L
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
F ++ D L PD + + IL A + + EG+
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGR 451
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 1/245 (0%)
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
L+ +AD + A Q+FDEM W+ MI + EA+ + M A K ++
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
T ++ + + + ++ G+ IH+ + + V + +L +Y K G A VF
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
MPE+++ S+ MIS G + LF +M G KPD S L ACSH+ G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 320 KMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR 379
K VR V ++D+ ++ G + A I M ++ N V +G
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYA 309
Query: 380 NQGSV 384
G V
Sbjct: 310 RNGRV 314
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 223/390 (57%), Gaps = 18/390 (4%)
Query: 67 NTIIRALANSPTPLESLVFFR-RLQRSGLSPDNFTYPFALK--ACARVSSLSHGGVFHSL 123
N ++ S P+++L+ FR R ++S D+F+ FA+K + + SSL G H+L
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHAL 90
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-TVVTWSSMIAAYVGSNSPSE 182
K G ++ +L+ FY+ G + +ARQVFDE + +V W++MI+AY + + E
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY-ITRNH-VDMSVELGTAL 240
A+ +F+ M + + V + LSAC+ + V GE I+S I R + M + L +L
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM------EDM 294
MY K G +KA +F+ K++ ++T MI +G ++ + LF +M +D
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
+ P+ ++F +L ACSH GLV+EGK +F M+ YN+KP H+GCMVDL R+G +++
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 355 AYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGANYVLTANVFST 412
A++ I MP++PN VI R+ LGAC G+V ++ + + +L+ + +YV +N++++
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 413 CASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
W + S +R ++++ + PG SW+E+
Sbjct: 391 KGMWDEKSKMRDRVRKRRM---PGKSWIEL 417
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 43/321 (13%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY 101
+S + +A+ F+ P + W +I A + +E++ F+R++ + D
Sbjct: 111 SSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIV 170
Query: 102 PFALKACARVSSLSHGGVFHSLTLKTG--LSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
AL ACA + ++ G +S ++K L+ D N+LL Y G AR++FDE
Sbjct: 171 TVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDES 230
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK------PNSVTLVSLLSACSKMV 213
+ V T++SMI Y + E+L +F++M+ ++ PN VT + +L ACS
Sbjct: 231 MRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS--- 287
Query: 214 NVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMIS 273
HS + VE G F K ++ +N P + F M+
Sbjct: 288 --------HSGL--------VEEGKRHF---------KSMIMDYNLKPRE--AHFGCMVD 320
Query: 274 ALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIK 333
G KD QM +KP+ + + +L ACS G V+ G+ R+ + +
Sbjct: 321 LFCRSGHLKDAHEFINQMP---IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELD--R 375
Query: 334 PSVEHYGCMVDLLARAGLIQE 354
V Y + ++ A G+ E
Sbjct: 376 DHVGDYVALSNIYASKGMWDE 396
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 225/454 (49%), Gaps = 54/454 (11%)
Query: 38 FLLSASTISLPFAKSFFNSLPITPPL-FAWNTIIRALANSPTPLESLVFFRRLQRSGLSP 96
F AS+ + A+ F+ +P++ W T++ + + + S+ F ++R +
Sbjct: 50 FQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEI 109
Query: 97 DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIG------ 150
D+ + CA++ L H + +K G+ + N L+ Y CG +
Sbjct: 110 DDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIF 169
Query: 151 -------------------------FARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
R+VF EM R V W+ M+A Y+G+ E L
Sbjct: 170 EELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLE 229
Query: 186 VFQEMRL-ANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE-------LG 237
+ EM N VTL S+LSAC++ N+ G +H Y + + M E +G
Sbjct: 230 LLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVG 289
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLK 297
TAL +MYAKCG + ++ VF M ++N+ ++ + S L HG + VI +F QM +K
Sbjct: 290 TALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM-IREVK 348
Query: 298 PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYD 357
PD L+F+ +LSACSH G+VDEG F + R Y ++P V+HY CMVDLL RAGLI+EA
Sbjct: 349 PDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEI 407
Query: 358 IIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESEL------GANY-VLTANVF 410
+++ MP+ PN V+L S LG+C G V ++ +++ EL Y +L +N++
Sbjct: 408 LMREMPVPPNEVVLGSLLGSCSVHGKV-----EIAERIKRELIQMSPGNTEYQILMSNMY 462
Query: 411 STCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
A LR +++++G++K PG S + V +
Sbjct: 463 VAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVND 496
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 52/305 (17%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSS--DCYTDNTLLKFYADCGAIGFARQVFDEMAV- 161
L+ CA S L G H++ +GL Y N L +FYA G + A+++FDE+ +
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 162 -RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
+ V W+++++++ ++ +F EMR + + V++V L C+K+ ++ +
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQ 132
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGL------------------------------- 249
H + V SV++ AL +MY KCGL
Sbjct: 133 GHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 250 MKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DMGLKPDGLSFSVILS 308
+++ VF+ MPE+N ++T+M++ G ++V+ L +M G + ++ +LS
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 309 ACSHMGLVDEGKMYFDRMVRMYNIKPS-----------VEHYGCMVDLLARAGLIQEAYD 357
AC+ G + R V +Y +K V +VD+ A+ G I + +
Sbjct: 253 ACAQ-----SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMN 307
Query: 358 IIKNM 362
+ + M
Sbjct: 308 VFRLM 312
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 219/405 (54%), Gaps = 7/405 (1%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
S+ AK F+ L + L +WN++I + + F ++QR + D +TY L
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLL 312
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD--CGAIGFARQVFDEMAVRT 163
AC+ G H + +K GL N L+ Y G + A +F+ + +
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKD 372
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
+++W+S+I + +A+ F +R + K + +LL +CS + + G+ IH+
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN-LQSFTIMISALGNHGCQK 282
T++ + + ++L MY+KCG+++ A F + K+ ++ MI HG +
Sbjct: 433 LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQ 492
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCM 342
+ LF+QM + +K D ++F+ IL+ACSH GL+ EG + M +Y I+P +EHY
Sbjct: 493 VSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAA 552
Query: 343 VDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP---SLDDKLMSKLESEL 399
VDLL RAGL+ +A ++I++MP+ P+ ++L++FLG CR G + + + L+ ++E E
Sbjct: 553 VDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL-EIEPED 611
Query: 400 GANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
YV ++++S W++ ++++ MK++G+KK PG SW+E++N
Sbjct: 612 HFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 3/267 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L +A F+ +P + +WNT+I + ++ F ++RSG D +++ LK
Sbjct: 51 LGYANMLFDEMPKRDSV-SWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLK 109
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
A V G H L +K G + Y ++L+ YA C + A + F E++ V+
Sbjct: 110 GIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS 169
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRL-ANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
W+++IA +V A + M + A ++ T LL+ + + + +H+ +
Sbjct: 170 WNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKV 229
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM-PEKNLQSFTIMISALGNHGCQKDV 284
+ + + + A+ YA CG + A VF+ + K+L S+ MI+ H ++
Sbjct: 230 LKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESA 289
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACS 311
LF QM+ ++ D +++ +LSACS
Sbjct: 290 FELFIQMQRHWVETDIYTYTGLLSACS 316
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%)
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H +K G SD Y N +L Y G +G+A +FDEM R V+W++MI+ Y
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+A +F M+ + + + LL + + GE +H + + + +V +G++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
+MYAKC ++ A F + E N S+ +I+
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
H Y + + + + + Y K G + A ++F+ MP+++ S+ MIS + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 282 KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC 341
+D LFT M+ G DG SFS +L + + D G+ +++ + +V
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGSS 141
Query: 342 MVDLLARAGLIQEAYDIIKNMPMEPNAV 369
+VD+ A+ +++A++ K + EPN+V
Sbjct: 142 LVDMYAKCERVEDAFEAFKEIS-EPNSV 168
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 215/386 (55%), Gaps = 9/386 (2%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ AWN++I A+ +++L FR++ + PD FT ++ AC + G H
Sbjct: 370 IVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHG 429
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
++T +S D + N+L+ Y+ G++ A VF+++ R+VVTW+SM+ + + + E
Sbjct: 430 HVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH-SYITRNHVDMSVELGTALF 241
A+ +F M + + N VT ++++ ACS + ++ G+ +H I D+ + TAL
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD--TALI 546
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+MYAKCG + A VF +M +++ S++ MI+A G HG IS F QM + G KP+ +
Sbjct: 547 DMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEV 606
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
F +LSAC H G V+EGK YF+ M + + + P+ EH+ C +DLL+R+G ++EAY IK
Sbjct: 607 VFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKE 665
Query: 362 MPMEPNAVILRSFLGACR---NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKD 418
MP +A + S + CR + ++ + L + + G Y L +N+++ W++
Sbjct: 666 MPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGY-YTLLSNIYAEEGEWEE 724
Query: 419 ASNLRLAMKQKGLKKNPGCSWLEVQN 444
LR AMK LKK PG S +E+
Sbjct: 725 FRRLRSAMKSSNLKKVPGYSAIEIDQ 750
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 183/392 (46%), Gaps = 39/392 (9%)
Query: 31 NPYLISQFLLSASTISLP-FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL 89
+P +++ + S + + P ++ F + P P F + +I+ ++ + RL
Sbjct: 33 DPLPVTKLIESYAFMGSPDSSRLVFEAFPY-PDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 90 QRSGLSPDNFTYPFALKACA-RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
F +P L+ACA LS GG H +K G+ D + +LL Y G
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+ A +VFD M VR +V WS+++++ + + +AL +F+ M +P++VT++S++
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
C+++ + S+H ITR D+ L +L MY+KCG + + +F + +KN S+
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
T MIS+ + + F++M G++P+ ++ +LS+C +GL+ EGK VR
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR 331
Query: 329 MYNIKPSVEH--------------------------------YGCMVDLLARAGLIQEAY 356
+ P+ E + ++ L A G++ +A
Sbjct: 332 R-ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 357 DIIKNM---PMEPNAVILRSFLGACRNQGSVP 385
+ + M ++P+A L S + AC N G VP
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 165/352 (46%), Gaps = 7/352 (1%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+W +I + ++L F + +SG+ P+ T L +C + + G H
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFA 329
Query: 125 LKTGLSSDCYTDN-TLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
++ L + + + L++ YA+CG + V ++ R +V W+S+I+ Y +A
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA 389
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE-LGTALFE 242
L +F++M KP++ TL S +SAC V G+ IH ++ R D+S E + +L +
Sbjct: 390 LGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT--DVSDEFVQNSLID 447
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
MY+K G + A VFN + +++ ++ M+ +G + ISLF M L+ + ++
Sbjct: 448 MYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVT 507
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F ++ ACS +G +++GK +++ + +K ++D+ A+ G + A + + M
Sbjct: 508 FLAVIQACSSIGSLEKGKWVHHKLI-ISGLKDLFTDTA-LIDMYAKCGDLNAAETVFRAM 565
Query: 363 PMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCA 414
S + A G + S +ES N V+ NV S C
Sbjct: 566 SSRSIVSWS-SMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACG 616
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 221 bits (564), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 221/399 (55%), Gaps = 6/399 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ + P +WN II LAN+ E++ F +++ SG PD + L A
Sbjct: 324 ARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQT 382
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT-VVTWS 168
+ +LS G HS +K G +D N+LL Y C + +F++ V+W+
Sbjct: 383 KPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWN 442
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+++ A + P E L +F+ M ++ +P+ +T+ +LL C ++ ++ G +H Y +
Sbjct: 443 TILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT 502
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ + L +MYAKCG + +A +F+SM +++ S++ +I G ++ + LF
Sbjct: 503 GLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILF 562
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+M+ G++P+ ++F +L+ACSH+GLV+EG + M + I P+ EH C+VDLLAR
Sbjct: 563 KEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLAR 622
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMS---KLESELGANYVL 405
AG + EA I M +EP+ V+ ++ L AC+ QG+V L K K++ +VL
Sbjct: 623 AGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNV-HLAQKAAENILKIDPFNSTAHVL 681
Query: 406 TANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
++ ++ +W++A+ LR +MK+ +KK PG SW+E+++
Sbjct: 682 LCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIED 720
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
SL A+ F+ +P L ++ ++I + + E++ + ++ + L PD F + +
Sbjct: 117 SLRDAREVFDFMP-ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
KACA S + G H+ +K SS N L+ Y + A +VF + ++ ++
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+WSS+IA + EAL +EM PN S L ACS ++ G IH
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
++ + + G +L +MYA+CG + A VF+ + + S+ ++I+ L N+G +
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSA 309
+S+F+QM G PD +S +L A
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCA 380
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 178/411 (43%), Gaps = 50/411 (12%)
Query: 33 YLISQFLLSASTI---SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL 89
+LI+Q L A + + A F +P+ L +W++II + E+L + +
Sbjct: 202 HLIAQNALIAMYVRFNQMSDASRVFYGIPM-KDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 90 QRSGL-SPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
G+ P+ + + +LKAC+ + +G H L +K+ L+ + +L YA CG
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF 320
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+ AR+VFD++ +W+ +IA + EA+ VF +MR + P++++L SLL A
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK-NLQS 267
+K + +S G IHSYI + + + +L MY C + +F + S
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM-------------- 313
+ +++A H +++ LF M +PD ++ +L C +
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 314 ------------GLVD---------EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
GL+D + + FD M V + ++ A++G
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-----NRDVVSWSTLIVGYAQSGFG 555
Query: 353 QEAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG 400
+EA + K M +EPN V L AC + G V KL + +++E G
Sbjct: 556 EEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEE-GLKLYATMQTEHG 605
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 140/319 (43%), Gaps = 6/319 (1%)
Query: 67 NTIIRALANSPTPLESLVFFRRLQR-SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
N I +L S E+L F Q+ S TY + AC+ SL+ G H L
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
+ D +N +L Y CG++ AR+VFD M R +V+++S+I Y + +EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
++ +M + P+ S++ AC+ +V G+ +H+ + + + AL MY
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYV 214
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL-KPDGLSFS 304
+ M A VF +P K+L S++ +I+ G + + +S +M G+ P+ F
Sbjct: 215 RFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFG 274
Query: 305 VILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC-MVDLLARAGLIQEAYDIIKNMP 363
L ACS + D G ++ ++ GC + D+ AR G + A + +
Sbjct: 275 SSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA--GCSLCDMYARCGFLNSARRVFDQIE 332
Query: 364 MEPNAVILRSFLGACRNQG 382
P+ + N G
Sbjct: 333 -RPDTASWNVIIAGLANNG 350
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 214/430 (49%), Gaps = 37/430 (8%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+S+P + +WNT++ A E+L F++ +RSG+ + F++ L AC
Sbjct: 132 ARVVFDSMP-ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV 190
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----- 164
+ L H L G S+ +++ YA CG + A++ FDEM V+ +
Sbjct: 191 KSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT 250
Query: 165 --------------------------VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPN 198
V+W+++IA YV S + AL +F++M KP
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
T S L A + + ++ G+ IH Y+ R +V + + ++L +MY+K G ++ + VF
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 259 SMPEKNLQSF-TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVD 317
+K+ F MISAL HG + + M ++P+ + VIL+ACSH GLV+
Sbjct: 371 ICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVE 430
Query: 318 EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
EG +F+ M + I P EHY C++DLL RAG +E I+ MP EP+ I + LG
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 378 CRNQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKN 434
CR G+ D+L+ KL+ E A Y+L +++++ W+ LR MK++ + K
Sbjct: 491 CRIHGNEELGKKAADELI-KLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKE 549
Query: 435 PGCSWLEVQN 444
SW+E++
Sbjct: 550 KAVSWIEIEK 559
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 131/298 (43%), Gaps = 36/298 (12%)
Query: 134 YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLA 193
Y+ N ++ Y G + AR VFD M R VV+W++M+ Y + EAL ++E R +
Sbjct: 114 YSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS 173
Query: 194 NEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
K N + LL+AC K + H + +V L ++ + YAKCG M+ A
Sbjct: 174 GIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESA 233
Query: 254 LLVFN-------------------------------SMPEKNLQSFTIMISALGNHGCQK 282
F+ MPEKN S+T +I+ G
Sbjct: 234 KRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGN 293
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCM 342
+ LF +M +G+KP+ +FS L A + + + GK M+R N++P+ +
Sbjct: 294 RALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSL 352
Query: 343 VDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG----SVPSLDDKLMSKLE 396
+D+ +++G ++ + + + + + V + + A G ++ LDD + +++
Sbjct: 353 IDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ 410
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 225/470 (47%), Gaps = 77/470 (16%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK--- 106
A + F +P+ + +WN +I+ + ++ F +QR PD T+ L
Sbjct: 212 AYNLFVEMPVRNRM-SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 107 --------------------------------ACARVSSLSHGGVFHSLTLKTGLSSDCY 134
CA + +LS H +K G
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 135 TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL---------- 184
+ N L+ Y G + A +F ++ + + +W+S+I ++V + EAL
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 185 HV-----------------------------FQEMRLANEKPNSVTLVSLLSACSKMVNV 215
HV F++M+ + NSVT+ +LS C+++ +
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
+ G IH ++ R + ++ + AL MYAKCGL+ + LVF ++ +K+L S+ +I
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 276 GNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
G HG + +S+F +M G PDG++ +LSACSH GLV++G+ F M + + ++P
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMS 393
EHY C+VDLL R G ++EA +I+KNMPMEP +L + L +CR +V + +S
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLS 630
Query: 394 KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
LE E +Y+L +N++S W++++N+R K+K LKK G SW+EV+
Sbjct: 631 VLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVK 680
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 53/350 (15%)
Query: 30 HNPYLISQFL-----LSASTIS-------LPFAKSFFN--SLPITPPLFAWNTIIRALAN 75
H L+S F+ L+A+ IS L A++ F SL + L WN+I++A +
Sbjct: 76 HAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVS 135
Query: 76 SPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYT 135
+L +R +++ GL+ D + P L+AC + FH+ ++ GL + +
Sbjct: 136 HGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHV 195
Query: 136 DNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE 195
N LL Y G +G A +F EM VR ++W+ MI + A+ +F+ M+
Sbjct: 196 VNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEF 255
Query: 196 KPNSVTLVSLL-----------------------------------SACSKMVNVSAGES 220
KP+ VT S+L S C+++ +S E
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
+H Y+ + + + AL +Y K G +K A +F + K ++S+ +I++ + G
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Query: 281 QKDVISLFTQMEDM----GLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
+ +SLF+++E+M +K + ++++ ++ C+ G D+ YF +M
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 217/425 (51%), Gaps = 49/425 (11%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQR--------SGLSP-DNFTYPFALKACA--RV 111
LF +N ++R + TPL + + +LQR L P D+FTY F LKA + R
Sbjct: 77 LFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRF 136
Query: 112 SSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR--------- 162
SL G H LTLK G S Y L+ Y G + A +VFDEM R
Sbjct: 137 PSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMI 196
Query: 163 ----------------------TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KPNS 199
TVV+W+++I Y + P EA+ +F M + KPN
Sbjct: 197 TGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNE 256
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYI-TRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
+T++++L A + ++ S+H+Y+ R V + + +L + YAKCG ++ A F
Sbjct: 257 ITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFI 316
Query: 259 SMP--EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
+P KNL S+T MISA HG K+ +S+F ME +GLKP+ ++ +L+ACSH GL
Sbjct: 317 EIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLA 376
Query: 317 DEGKM-YFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
+E + +F+ MV Y I P V+HYGC+VD+L R G ++EA I +P+E AV+ R L
Sbjct: 377 EEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Query: 376 GACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKK 433
GAC + + + + +LE G +YVL +N+F + DA R M +G+ K
Sbjct: 437 GACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAK 496
Query: 434 NPGCS 438
PG S
Sbjct: 497 LPGHS 501
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR-SGLSPDNFTYPFALKAC 108
A F +P + +W TII A P E+++ F R+ + P+ T L A
Sbjct: 208 ALCFLEKMP-NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAV 266
Query: 109 ARVSSLSHGGVFHSLTLKTG-LSSDCYTDNTLLKFYADCGAIGFARQVFDEM--AVRTVV 165
+ L G H+ K G + D N+L+ YA CG I A + F E+ + +V
Sbjct: 267 WNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLV 326
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACS 210
+W++MI+A+ EA+ +F++M KPN VT++S+L+ACS
Sbjct: 327 SWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACS 371
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 191/321 (59%), Gaps = 12/321 (3%)
Query: 132 DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR 191
D + NT+L+ YA+ G + +VFD+M R V +W+ +I Y + SE L F+ R
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFK--R 177
Query: 192 LANEK---PNSVTLVSLLSACSKMVNVSAGESIHSY---ITRNHVDMSVELGTALFEMYA 245
+ +E PN T+ +LSAC+K+ G+ +H Y + N VD++V+ AL +MY
Sbjct: 178 MVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVK--NALIDMYG 235
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
KCG ++ A+ VF + ++L S+ MI+ L HG + ++LF +M++ G+ PD ++F
Sbjct: 236 KCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVG 295
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
+L AC HMGLV++G YF+ M ++I P +EH GC+VDLL+RAG + +A + I MP++
Sbjct: 296 VLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVK 355
Query: 366 PNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLR 423
+AVI + LGA + + + + + + KLE AN+V+ +N++ + DA+ L+
Sbjct: 356 ADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLK 415
Query: 424 LAMKQKGLKKNPGCSWLEVQN 444
+AM+ G KK G SW+E +
Sbjct: 416 VAMRDTGFKKEAGVSWIETDD 436
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 4/213 (1%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG-LSPDNFTYPFALKACARVS 112
F+ +P +F+WN +I+ A + E L F+R+ G + P++ T L ACA++
Sbjct: 144 FDDMP-ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 113 SLSHGGVFHSLTLKTGLSS-DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMI 171
+ G H G + D N L+ Y CGAI A +VF + R +++W++MI
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 172 AAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES-IHSYITRNHV 230
+EAL++F EM+ + P+ VT V +L AC M V G + +S T +
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEK 263
+E + ++ ++ G + +A+ N MP K
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVK 355
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 9/217 (4%)
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G I A +VF EM + VV W+SMI Y+ + A F L+ E+ + V +++
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD---LSPER-DIVLWNTMI 97
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
S +M N+ S+ + V MS + E YA G M+ VF+ MPE+N+
Sbjct: 98 SGYIEMGNMLEARSLFDQMPCRDV-MS---WNTVLEGYANIGDMEACERVFDDMPERNVF 153
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
S+ +I +G +V+ F +M D G + P+ + +++LSAC+ +G D GK
Sbjct: 154 SWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+ K V ++D+ + G I+ A ++ K +
Sbjct: 214 GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 182/306 (59%), Gaps = 2/306 (0%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANE 195
N +++ G G A++V + + V+TW+ MI YV + EAL + M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 196 KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALL 255
KPN + S L+AC+++ ++ + +HS + + ++++ L +AL ++YAKCG + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 256 VFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
VF S+ ++ + MI+ HG + I +F++ME + PD ++F +L+ CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
++EGK YF M R ++I+P +EHYG MVDLL RAG ++EAY++I++MP+EP+ VI RS L
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 376 GACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNP 435
+ R + P L + + L +YVL +N++S+ W+ A +R M ++G++K
Sbjct: 342 SSSRTYKN-PELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK 400
Query: 436 GCSWLE 441
G SWLE
Sbjct: 401 GKSWLE 406
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRR-LQRSGLSPDNFTYPFALKACARVSSLSHGGVFH 121
+ WN +I + E+L + L + + P+ F++ +L ACAR+ L H H
Sbjct: 129 VITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVH 188
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
SL + +G+ + + L+ YA CG IG +R+VF + V W++MI + +
Sbjct: 189 SLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLAT 248
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN-HVDMSVELGTAL 240
EA+ VF EM + P+S+T + LL+ CS + G+ ++R + +E A+
Sbjct: 249 EAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAM 308
Query: 241 FEMYAKCGLMKKALLVFNSMP 261
++ + G +K+A + SMP
Sbjct: 309 VDLLGRAGRVKEAYELIESMP 329
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 196/359 (54%), Gaps = 4/359 (1%)
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
L SGL + TY L+ C + + G H+ G + + Y LL YA G
Sbjct: 99 LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGD 158
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+ A +F + +R ++ W++MI+ YV E L ++ +MR P+ T S+ A
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRA 218
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
CS + + G+ H+ + + + ++ + +AL +MY KC VF+ + +N+ ++
Sbjct: 219 CSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITW 278
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
T +IS G HG +V+ F +M++ G +P+ ++F V+L+AC+H GLVD+G +F M R
Sbjct: 279 TSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKR 338
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD 388
Y I+P +HY MVD L RAG +QEAY+ + P + + + S LGACR G+V L+
Sbjct: 339 DYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLE 398
Query: 389 ---DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
K + +L+ G NYV+ AN +++C + AS +R M+ G+KK+PG S +E+Q
Sbjct: 399 LAATKFL-ELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQG 456
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 3/225 (1%)
Query: 31 NPYL-ISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL 89
N YL + +L A + L A F SL I L WN +I E L + +
Sbjct: 142 NEYLKVKLLILYALSGDLQTAGILFRSLKIRD-LIPWNAMISGYVQKGLEQEGLFIYYDM 200
Query: 90 QRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
+++ + PD +T+ +AC+ + L HG H++ +K + S+ D+ L+ Y C +
Sbjct: 201 RQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSF 260
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
+VFD+++ R V+TW+S+I+ Y SE L F++M+ +PN VT + +L+AC
Sbjct: 261 SDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Query: 210 SKMVNVSAG-ESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
+ V G E +S ++ + A+ + + G +++A
Sbjct: 321 NHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA 365
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 225/411 (54%), Gaps = 8/411 (1%)
Query: 35 ISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGL 94
++Q L+A S A+ F+ + + +W T+I + P +++ +R + + +
Sbjct: 338 LTQMYLNAG--SWREAEKLFSRME-RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSV 394
Query: 95 SPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQ 154
PD T L ACA + L G H L +K L S N L+ Y+ C I A
Sbjct: 395 KPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALD 454
Query: 155 VFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN 214
+F + + V++W+S+IA +N EAL ++M++ + PN++TL + L+AC+++
Sbjct: 455 IFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQ-PNAITLTAALAACARIGA 513
Query: 215 VSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA 274
+ G+ IH+++ R V + L AL +MY +CG M A FNS +K++ S+ I+++
Sbjct: 514 LMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTG 572
Query: 275 LGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKP 334
G V+ LF +M ++PD ++F +L CS +V +G MYF +M Y + P
Sbjct: 573 YSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTP 631
Query: 335 SVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLM 392
+++HY C+VDLL RAG +QEA+ I+ MP+ P+ + + L ACR ++ + L + +
Sbjct: 632 NLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHI 691
Query: 393 SKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+L+ + Y+L N+++ C W++ + +R MK+ GL + GCSW+EV+
Sbjct: 692 FELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVK 742
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 157/318 (49%), Gaps = 3/318 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRR-LQRSGLSPDNFTYPFALKACARVSSLSHGGVFH 121
LF+WN ++ A E++ + R L G+ PD +T+P L+ C + L+ G H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
++ G D N L+ Y CG + AR +FD M R +++W++MI+ Y +
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
E L +F MR + P+ +TL S++SAC + + G IH+Y+ + + + +L
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLT 339
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+MY G ++A +F+ M K++ S+T MIS + I + M+ +KPD +
Sbjct: 340 QMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEI 399
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
+ + +LSAC+ +G +D G + ++ + V ++++ ++ I +A DI N
Sbjct: 400 TVAAVLSACATLGDLDTG-VELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHN 458
Query: 362 MPMEPNAVILRSFLGACR 379
+P N + S + R
Sbjct: 459 IP-RKNVISWTSIIAGLR 475
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 114/235 (48%), Gaps = 1/235 (0%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E++ +Q ++ D + ++ C + G +S+ L + S N L
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKPNS 199
+ G + A VF +M+ R + +W+ ++ Y EA+ ++ M + KP+
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
T +L C + +++ G+ +H ++ R ++ +++ AL MY KCG +K A L+F+
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
MP +++ S+ MIS +G + + LF M + + PD ++ + ++SAC +G
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
L+ QE+R+A ++ V LV L C G ++S + + VELG A M
Sbjct: 82 LNSMQELRVAVDEDVFVALVRL---CEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAM 138
Query: 244 YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM-GLKPDGLS 302
+ + G + A VF M E+NL S+ +++ G + + L+ +M + G+KPD +
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
F +L C + + GK +VR Y + ++ ++ + + G ++ A + M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKCGDVKSARLLFDRM 257
Query: 363 P 363
P
Sbjct: 258 P 258
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 217/400 (54%), Gaps = 7/400 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
+ F+S+P P + AWN ++ +N E++ FR++Q L PD T L +CA
Sbjct: 369 GRRIFSSIP-QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE-MAVRTVVTWS 168
R+ L G H + ++T +S + + + L+ Y++C + + +FD+ + + W+
Sbjct: 428 RLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWN 487
Query: 169 SMIAAYVGSNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
SMI+ + + ++AL +F+ M + A PN + ++LS+CS++ ++ G H + +
Sbjct: 488 SMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVK 547
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ + TAL +MY KCG + A F+++ KN + MI G++G + + L
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGL 607
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+ +M G KPDG++F +L+ACSH GLV+ G M R++ I+P ++HY C+VD L
Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 348 RAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP---SLDDKLMSKLESELGANYV 404
RAG +++A + + P + ++V+ L +CR G V + +KLM +L+ + A YV
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLM-RLDPQSSAAYV 726
Query: 405 LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
L +N +S+ W D++ L+ M + + K PG SW N
Sbjct: 727 LLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGN 766
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 156/345 (45%), Gaps = 19/345 (5%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A F+ +P + +WN +I L ++LV ++R+ G P FT L
Sbjct: 88 LGEACEVFDGMP-ERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLS 146
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI-GFARQVFDEMAVRTVV 165
AC++V G H + +KTGL + + N LL YA CG I + +VF+ ++ V
Sbjct: 147 ACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEV 206
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS------ACSKMVNVSA-- 217
+++++I N EA+ +F+ M + +SV L ++LS C + +
Sbjct: 207 SYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNE 266
Query: 218 -GESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
G+ IH R + L +L E+YAK M A L+F MPE N+ S+ IMI G
Sbjct: 267 LGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFG 326
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
+ T+M D G +P+ ++ +L AC G V+ G+ F + +PSV
Sbjct: 327 QEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP-----QPSV 381
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSFLGAC 378
+ M+ + +EA + M ++P+ L L +C
Sbjct: 382 SAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 108/224 (48%), Gaps = 32/224 (14%)
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV------------ 164
G V H ++ G+ SD Y N LL Y +CG +AR+VFDEM+VR V
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 165 -------------------VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
V+W++MI+ V +AL V++ M P+ TL S+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG-LMKKALLVFNSMPEKN 264
LSACSK+++ G H + +D ++ +G AL MYAKCG ++ + VF S+ + N
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
S+T +I L + + +F M + G++ D + S ILS
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 157/370 (42%), Gaps = 46/370 (12%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F +P + +WN +I +S+ F R++ SG P+ T L AC
Sbjct: 303 AELIFAEMP-EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC- 360
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
F S ++TG R++F + +V W++
Sbjct: 361 ----------FRSGDVETG------------------------RRIFSSIPQPSVSAWNA 386
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
M++ Y EA+ F++M+ N KP+ TL +LS+C+++ + G+ IH + R
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTE 446
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNS-MPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ + + + L +Y++C M+ + +F+ + E ++ + MIS ++ + LF
Sbjct: 447 ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILF 506
Query: 289 TQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+M L P+ SF+ +LS+CS + + G+ + +V+ + S + D+
Sbjct: 507 RRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYC 565
Query: 348 RAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG---SVPSLDDKLMSKLESELGANYV 404
+ G I A + + N VI + + G L K++S E G +V
Sbjct: 566 KCGEIDSARQFF-DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFV 624
Query: 405 LTANVFSTCA 414
+V + C+
Sbjct: 625 ---SVLTACS 631
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 224/441 (50%), Gaps = 44/441 (9%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLES---LVFFRRL-QRSGLSPDNFTY 101
+L +A+ F+ P + ++ A ++S PL + FFR + RS P++F Y
Sbjct: 72 NLSYARFIFDRFSF-PNTHLYAAVLTAYSSS-LPLHASSAFSFFRLMVNRSVPRPNHFIY 129
Query: 102 PFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD-CGAIGFARQVFDEMA 160
P LK+ +SS + H+ K+G LL YA I ARQ+FDEM+
Sbjct: 130 PLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEM-----------------------------R 191
R VV+W++M++ Y S S A+ +F++M R
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 192 LANE---KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG 248
+ NE +PN VT+V +LSAC++ + + IH++ R + V + +L ++Y KCG
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 249 LMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL---KPDGLSFSV 305
+++A VF +K+L ++ MI+ HG ++ I++F +M + + KPD ++F
Sbjct: 310 NLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIG 369
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
+L+AC+H GLV +G+ YFD M + I+P +EHYGC++DLL RAG EA +++ M M+
Sbjct: 370 LLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMK 429
Query: 366 PNAVILRSFLGACRNQG--SVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLR 423
+ I S L AC+ G + + K + L G + AN++ +W++A R
Sbjct: 430 ADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRAR 489
Query: 424 LAMKQKGLKKNPGCSWLEVQN 444
+K + K PG S +E+ N
Sbjct: 490 KMIKHQNAYKPPGWSRIEIDN 510
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 200/385 (51%), Gaps = 4/385 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +W+T+I + E+L+ F + G P+ T L+ACA L G H
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L ++ GL ++ L+ Y C + A VF + + VV+W ++I+ + +
Sbjct: 289 LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHR 348
Query: 183 ALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
++ F M L N +P+++ +V +L +CS++ + + HSY+ + D + +G +L
Sbjct: 349 SIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLV 408
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPDG 300
E+Y++CG + A VFN + K+ +T +I+ G HG + F M + +KP+
Sbjct: 409 ELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNE 468
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++F ILSACSH GL+ EG F MV Y + P++EHY +VDLL R G + A +I K
Sbjct: 469 VTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Query: 361 NMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKD 418
MP P IL + LGACR G + K + +LES Y+L +NV+ W++
Sbjct: 529 RMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWEN 588
Query: 419 ASNLRLAMKQKGLKKNPGCSWLEVQ 443
LR ++KQ+G+KK S +E++
Sbjct: 589 VEKLRNSVKQRGIKKGLAESLIEIR 613
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 185/355 (52%), Gaps = 3/355 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L+ WNT++++L+ E L F + R PDNFT P ALKAC + +++G + H
Sbjct: 25 LYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHG 84
Query: 123 LTLK-TGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
K L SD Y ++L+ Y CG + A ++FDE+ +VTWSSM++ + + SP
Sbjct: 85 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 144
Query: 182 EALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+A+ F+ M +A++ P+ VTL++L+SAC+K+ N G +H ++ R + L +L
Sbjct: 145 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSL 204
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
YAK K+A+ +F + EK++ S++ +I+ +G + + +F M D G +P+
Sbjct: 205 LNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNV 264
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
+ +L AC+ +++G+ + +R ++ V+ +VD+ + +EAY +
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFS 323
Query: 361 NMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCAS 415
+P + + G N + S+++ + LE+ + +L V +C+
Sbjct: 324 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSE 378
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 177/357 (49%), Gaps = 5/357 (1%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRL-QRSGLSPDNFTYPFALKACARVSSLSHGGV 119
P + W++++ + +P +++ FFRR+ S ++PD T + AC ++S+ G
Sbjct: 125 PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRC 184
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNS 179
H ++ G S+D N+LL YA A A +F +A + V++WS++IA YV + +
Sbjct: 185 VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGA 244
Query: 180 PSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTA 239
+EAL VF +M +PN T++ +L AC+ ++ G H R ++ V++ TA
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTA 304
Query: 240 LFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKP 298
L +MY KC ++A VF+ +P K++ S+ +IS +G I F+ M + +P
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRP 364
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRM-YNIKPSVEHYGCMVDLLARAGLIQEAYD 357
D + +L +CS +G +++ K + +++ ++ P + +V+L +R G + A
Sbjct: 365 DAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG--ASLVELYSRCGSLGNASK 422
Query: 358 IIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCA 414
+ + ++ V G + +L+ SE+ N V ++ S C+
Sbjct: 423 VFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
ARQ+F EM R++ W++++ + E L+ F M EKP++ TL L AC +
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 212 MVNVSAGESIHSYITRNHVDMSVEL--GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFT 269
+ V+ GE IH ++ ++ V + +L G++L MY KCG M +AL +F+ + + ++ +++
Sbjct: 73 LREVNYGEMIHGFVKKD-VTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 270 IMISALGNHGCQKDVISLFTQM-EDMGLKPDGLSFSVILSACSHM 313
M+S +G + F +M + PD ++ ++SAC+ +
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 199/372 (53%), Gaps = 9/372 (2%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
FAWN++I A +++ + ++ G+ PD FT+P LKAC + S+ G H
Sbjct: 161 FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRD 220
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
+K G D Y N L+ YA CG I AR VFD + + V+W+SM+ Y+ EA
Sbjct: 221 LVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEA 280
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
L +F+ M +P+ V + S+L +++++ G +H ++ R ++ + + AL +
Sbjct: 281 LDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVL 337
Query: 244 YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSF 303
Y+K G + +A +F+ M E++ S+ +ISA H + + F QM KPDG++F
Sbjct: 338 YSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITF 394
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYD-IIKNM 362
+LS C++ G+V++G+ F M + Y I P +EHY CMV+L RAG+++EAY I++ M
Sbjct: 395 VSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEM 454
Query: 363 PMEPNAVILRSFLGACRNQGS--VPSLDDKLMSKLESELGANYVLTANVFSTCASWKDAS 420
+E + + L AC G+ + + + + +LE + N+ L ++S +D
Sbjct: 455 GLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVE 514
Query: 421 NLRLAMKQKGLK 432
+R M +GL+
Sbjct: 515 RVRQMMVDRGLE 526
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 13/256 (5%)
Query: 60 TPPLFAWNTIIRALANSPTPLESL-VFFRRLQRSGLSPDNFTYP--FA--LKACARVSSL 114
TP L +I R T LE+L L+ S + T P FA L+ C + ++
Sbjct: 55 TPLLIEKQSIHR------TQLEALDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAI 108
Query: 115 SHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR--TVVTWSSMIA 172
HG H L L ++ + L++ YA CG A +VFD M+ R + W+S+I+
Sbjct: 109 DHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLIS 168
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
Y +A+ ++ +M KP+ T +L AC + +V GE+IH + +
Sbjct: 169 GYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY 228
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
V + AL MYAKCG + KA VF+ +P K+ S+ M++ +HG + + +F M
Sbjct: 229 DVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMV 288
Query: 293 DMGLKPDGLSFSVILS 308
G++PD ++ S +L+
Sbjct: 289 QNGIEPDKVAISSVLA 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 16/257 (6%)
Query: 186 VFQEMRLANEKPNSVT----LVSLLSACSKMVNVSAGESIHS----YITRNHVDMSVELG 237
V ++ + +K S+T SLL C + + G +H Y+ RN++ +S
Sbjct: 75 VITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGIS---- 130
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTI--MISALGNHGCQKDVISLFTQMEDMG 295
+ L +YA CG + A VF+ M +++ F +IS G +D ++L+ QM + G
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
+KPD +F +L AC +G V G+ +V+ V +V + A+ G I +A
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 356 YDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCAS 415
++ +P + V S L + G + D +++ + + V ++V + S
Sbjct: 250 RNVFDMIP-HKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS 308
Query: 416 WKDASNLRLAMKQKGLK 432
+K L + ++G++
Sbjct: 309 FKHGRQLHGWVIRRGME 325
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 180/311 (57%), Gaps = 3/311 (0%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N ++ G I AR+VFD M R +W ++I + + EAL +F M+ +
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
P TL+S+LS C+ + ++ G+ +H+ + R D+ V + + L MY KCG + K+ L+
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG-LKPDGLSFSVILSACSHMGL 315
F+ P K++ + +IS +HG ++ + +F +M G KP+ ++F LSACS+ G+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
V+EG ++ M ++ +KP HY CMVD+L RAG EA ++I +M +EP+A + S L
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 376 GACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKK 433
GACR +Q V K + ++E E Y+L +N++++ W D + LR MK + ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 434 NPGCSWLEVQN 444
+PGCSW EV+N
Sbjct: 569 SPGCSWTEVEN 579
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+W T+I+ + LE+L F +Q+ G+ P T L CA ++SL HG H+
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
++ D Y + L+ Y CG + ++ +FD + ++ W+S+I+ Y EAL
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 185 HVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTA-LFE 242
VF EM L+ KPN VT V+ LSACS V G I+ + + A + +
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVD 477
Query: 243 MYAKCGLMKKALLVFNSMP-EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
M + G +A+ + +SM E + + ++ A H Q DV F + + ++P+
Sbjct: 478 MLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS-QLDVAE-FCAKKLIEIEPENS 535
Query: 302 SFSVILS 308
++LS
Sbjct: 536 GTYILLS 542
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 43/288 (14%)
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G + AR++FDEM+ R+V+TW++M+ Y +N +A +F M E V+ S+L
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTE----VSWTSML 241
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
+ + E + + V A+ + G + KA VF+SM E+N
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVKPVIAC----NAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
S+ +I +G + + + LF M+ G++P + ILS C+ + + GK ++
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 327 VR----------------------------MYNIKPSVE--HYGCMVDLLARAGLIQEAY 356
VR +++ PS + + ++ A GL +EA
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 357 DIIKNMPM----EPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG 400
+ MP+ +PN V + L AC G V K+ +ES G
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE-GLKIYESMESVFG 464
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 135 TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
T N + + G I AR++FD +++ +W+SM+A Y + P +A +F EM
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYI-TRNHVDMSVELGTALFEMYAKCGLMKKA 253
N ++ L+S K + + + RN V TAL + Y G + A
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSW-----TALVKGYVHNGKVDVA 129
Query: 254 LLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
+F MPEKN S+T+M+ G D L+ + D D ++ + ++
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPD----KDNIARTSMIHGLCKE 185
Query: 314 GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRS 373
G VDE + FD M + SV + MV + + +A I MP +
Sbjct: 186 GRVDEAREIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSM 240
Query: 374 FLGACRN 380
+G +N
Sbjct: 241 LMGYVQN 247
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 35/274 (12%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N L+ Y G I AR+VFD M R VV+W++++ YV + A +F +M N+
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 197 PNSVTLVSLL------SACS--KMV----NVSAGESIHSYITRNHVDMSVEL-------- 236
+V L+ L AC +M+ N++ IH VD + E+
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS 202
Query: 237 ---GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
T + Y + + A +F+ MPEK S+T M+ +G +D LF E
Sbjct: 203 VITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF---EV 259
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
M +KP ++ + ++S G + + + FD M + + ++ + R G
Sbjct: 260 MPVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDAS-----WQTVIKIHERNGFEL 313
Query: 354 EAYD---IIKNMPMEPNAVILRSFLGACRNQGSV 384
EA D +++ + P L S L C + S+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 197/388 (50%), Gaps = 6/388 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ W +I +L R +Q G+ P+ T + C ++ G H
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHG 343
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
++ + SD + +L+ YA C + +VF + WS++IA V + S+
Sbjct: 344 WAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSD 403
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
AL +F+ MR + +PN TL SLL A + + ++ +IH Y+T+ S++ T L
Sbjct: 404 ALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVH 463
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIM----ISALGNHGCQKDVISLFTQMEDMGLKP 298
+Y+KCG ++ A +FN + EK+ ++ IS G HG + + +F +M G+ P
Sbjct: 464 VYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTP 523
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
+ ++F+ L+ACSH GLV+EG F M+ Y HY C+VDLL RAG + EAY++
Sbjct: 524 NEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNL 583
Query: 359 IKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLTANVFSTCASW 416
I +P EP + + + L AC +V + + +LE E NYVL AN+++ W
Sbjct: 584 ITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRW 643
Query: 417 KDASNLRLAMKQKGLKKNPGCSWLEVQN 444
KD +R M+ GL+K PG S +E+++
Sbjct: 644 KDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 144/284 (50%), Gaps = 3/284 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS--PDNFTYPFA 104
+ +A+ F +P L ++N +IR +++ F R+ G+ PD +TYPF
Sbjct: 65 ITYARKLFEEMP-QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFV 123
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
KA + S+ G V H L++ D Y N LL Y + G + AR VFD M R V
Sbjct: 124 AKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDV 183
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
++W++MI+ Y + ++AL +F M + + T+VS+L C + ++ G ++H
Sbjct: 184 ISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKL 243
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ + +E+ AL MY KCG M +A VF+ M +++ ++T MI+ G ++
Sbjct: 244 VEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENA 303
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
+ L M+ G++P+ ++ + ++S C V++GK VR
Sbjct: 304 LELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 11/307 (3%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ A+ F+ + + +WNT+I + ++L+ F + + D+ T L
Sbjct: 168 VEMARDVFDVMK-NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
C + L G H L + L N L+ Y CG + AR VFD M R V+T
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT 286
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+ MI Y AL + + M+ +PN+VT+ SL+S C + V+ G+ +H +
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
R V + + T+L MYAKC + VF+ + + ++ +I+ + D +
Sbjct: 347 RQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALG 406
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF +M ++P+ + + +L A + L D + + NI + G M L
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPA--YAALAD--------LRQAMNIHCYLTKTGFMSSLD 456
Query: 347 ARAGLIQ 353
A GL+
Sbjct: 457 AATGLVH 463
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 133/320 (41%), Gaps = 50/320 (15%)
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA 160
Y L A S+S H + G S + +TL YA CG I +AR++F+EM
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMP 76
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK----PNSVTLVSLLSACSKMVNVS 216
++++++ +I YV +A+ VF +R+ +E P+ T + A ++ ++
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVF--IRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 217 AGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
G +H I R+ + AL MY G ++ A VF+ M +++ S+ MIS
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM----------------------- 313
+G D + +F M + + D + +L C H+
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 314 ------------GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
G +DE + FDRM R V + CM++ G ++ A ++ +
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMER-----RDVITWTCMINGYTEDGDVENALELCRL 309
Query: 362 MPME---PNAVILRSFLGAC 378
M E PNAV + S + C
Sbjct: 310 MQFEGVRPNAVTIASLVSVC 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
Query: 190 MRLANEKPNSV-TLVSLLSACSKMVNVSAGESIHSY-ITRNHVDMSVELGTALFEMYAKC 247
+R AN +SV SLL+ + ++S +++H + IT V S + + L YA C
Sbjct: 5 LRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRV--SGHILSTLSVTYALC 62
Query: 248 GLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLK--PDGLSFSV 305
G + A +F MP+ +L S+ I+I G D IS+F +M G+K PDG ++
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL--ARAGLIQEAYDIIKN 361
+ A + + G + R++R + + + + + + ++ +D++KN
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN 180
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 210/391 (53%), Gaps = 19/391 (4%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG-- 118
P + A+N +I ++ SL F+ L SG L++ VS + G
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR---------LRSSTLVSLVPVSGHL 335
Query: 119 ----VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAY 174
H LK+ S L Y+ I AR++FDE +++ +W++MI+ Y
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ +A+ +F+EM+ + PN VT+ +LSAC+++ +S G+ +H + + S+
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI 455
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM 294
+ TAL MYAKCG + +A +F+ M +KN ++ MIS G HG ++ +++F +M +
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
G+ P ++F +L ACSH GLV EG F+ M+ Y +PSV+HY CMVD+L RAG +Q
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 355 AYDIIKNMPMEPNAVILRSFLGACR---NQGSVPSLDDKLMSKLESELGANYVLTANVFS 411
A I+ M +EP + + + LGACR + ++ +KL +L+ + +VL +N+ S
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLF-ELDPDNVGYHVLLSNIHS 634
Query: 412 TCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
++ A+ +R K++ L K PG + +E+
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 13/328 (3%)
Query: 36 SQFLLSASTISLPF-------AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
S+ LL ++ + + F A+ F+ +P + WNT+I + +ES+ FR
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTIL-WNTMISGYRKNEMYVESIQVFRD 210
Query: 89 L-QRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCG 147
L S D T L A A + L G HSL KTG S Y + Y+ CG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 148 AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
I +F E +V +++MI Y + +L +F+E+ L+ + S TLVSL+
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 208 ACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQS 267
++ + A IH Y +++ + TAL +Y+K ++ A +F+ PEK+L S
Sbjct: 331 VSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
+ MIS +G +D ISLF +M+ P+ ++ + ILSAC+ +G + GK D +V
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LV 446
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEA 355
R + + S+ ++ + A+ G I EA
Sbjct: 447 RSTDFESSIYVSTALIGMYAKCGSIAEA 474
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 191/429 (44%), Gaps = 56/429 (13%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS-GLSPDNFTYPFA 104
++ +A+ F S+ P +F +N ++R + + +P SL F L++S L P++ TY FA
Sbjct: 67 AIYYARDIFLSVQ-RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
+ A + G V H + G S+ + ++K Y + AR+VFD M +
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANE---KPNSVTLVSLLSACSKMVNVSAGESI 221
+ W++MI+ Y + E++ VF++ L NE + ++ TL+ +L A +++ + G I
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRD--LINESCTRLDTTTLLDILPAVAELQELRLGMQI 243
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
HS T+ + T +Y+KCG +K +F + ++ ++ MI ++G
Sbjct: 244 HSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGET 303
Query: 282 KDVISLFTQMEDMG----------------------------LKPDGLSFSVILSAC--- 310
+ +SLF ++ G LK + LS + + +A
Sbjct: 304 ELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTV 363
Query: 311 -SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEP 366
S + ++ + FD + + S+ + M+ + GL ++A + + M P
Sbjct: 364 YSKLNEIESARKLFDE-----SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSP 418
Query: 367 NAVILRSFLGACRNQGSV---PSLDDKLMS-KLESELGANYVLTA--NVFSTCASWKDAS 420
N V + L AC G++ + D + S ES + YV TA +++ C S +A
Sbjct: 419 NPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI---YVSTALIGMYAKCGSIAEAR 475
Query: 421 NLRLAMKQK 429
L M +K
Sbjct: 476 RLFDLMTKK 484
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
R +S+SH H+ + G +D L + +D GAI +AR +F + V ++
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
++ + + SP +L VF +R + + KPNS T +SA S + AG IH +
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
D + LG+ + +MY K ++ A VF+ MPEK+ + MIS + + I +F
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVF 208
Query: 289 TQM 291
+
Sbjct: 209 RDL 211
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 224/400 (56%), Gaps = 11/400 (2%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L KS F+ + + +W T+I S +++ F ++ G+ P+ T+ +
Sbjct: 327 LEAVKSVFHQMS-ERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLIN 380
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
A + G H L +KTG S+ N+ + YA A+ A++ F+++ R +++
Sbjct: 381 AVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIIS 440
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACS--KMVNVSAGESIHSY 224
W++MI+ + + EAL +F A PN T S+L+A + + ++V G+ H++
Sbjct: 441 WNAMISGFAQNGFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ + ++ + +AL +MYAK G + ++ VFN M +KN +T +ISA +HG + V
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
++LF +M + PD ++F +L+AC+ G+VD+G F+ M+ +YN++PS EHY CMVD
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVD 619
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGAN 402
+L RAG ++EA +++ +P P +L+S LG+CR G+V + +L +++ EL +
Sbjct: 620 MLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGS 679
Query: 403 YVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
YV N+++ W A+ +R AM++K + K G SW++V
Sbjct: 680 YVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%), Gaps = 9/262 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P + +WNTI+ ++ L F R++ +G+ D FTY AL C G
Sbjct: 138 VDPDVVSWNTILSGFDDNQIALN---FVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGL 194
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSN 178
S +KTGL SD N+ + Y+ G+ AR+VFDEM+ + +++W+S+++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 179 SPS-EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
+ EA+ +F++M + + V+ S+++ C ++ IH + + +E+G
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLK 297
L Y+KCG+++ VF+ M E+N+ S+T MIS+ + D +S+F M G+
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVY 369
Query: 298 PDGLSFSVILSACSHMGLVDEG 319
P+ ++F +++A + EG
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEG 391
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 108/239 (45%), Gaps = 9/239 (3%)
Query: 78 TPLESLVFFR---RLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCY 134
+P +L F+ +L G D T ALKAC L G H + +G +S
Sbjct: 55 SPARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVC 112
Query: 135 TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
N ++ Y G A +F+ + VV+W+++++ + + AL+ M+ A
Sbjct: 113 VSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGF---DDNQIALNFVVRMKSAG 169
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
++ T + LS C G + S + + ++ + +G + MY++ G + A
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGAR 229
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQK-DVISLFTQMEDMGLKPDGLSFSVILSACSH 312
VF+ M K++ S+ ++S L G + + +F M G++ D +SF+ +++ C H
Sbjct: 230 RVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 30/306 (9%)
Query: 152 ARQVFDEMAVRTVVT-WSSMIAAYVGSNSPSEALHVFQE-MRLA--NEKPNSVTLVSLLS 207
A ++FD + R T + I+ + NSP+ AL +F+E ++L + VTL L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 208 ACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQS 267
AC ++ G IH + T + V + A+ MY K G AL +F ++ + ++ S
Sbjct: 87 ACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG---KMYFD 324
+ ++S ++ + ++ +M+ G+ D ++S LS C + EG +
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFC----VGSEGFLLGLQLQ 197
Query: 325 RMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS- 383
V ++ + + + +R+G + A + M + + + S L +G+
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLSGLSQEGTF 256
Query: 384 ----VPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGC-S 438
V D + +E ++V +V +TC D L+LA + GL G S
Sbjct: 257 GFEAVVIFRDMMREGVE----LDHVSFTSVITTCCHETD---LKLARQIHGLCIKRGYES 309
Query: 439 WLEVQN 444
LEV N
Sbjct: 310 LLEVGN 315
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 205/385 (53%), Gaps = 13/385 (3%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF---- 120
+W +I + + FR +QR L P+ T L AC L++G
Sbjct: 218 SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE---LNYGSSLVKEI 274
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H + + G +D + Y CG + +R +F+ VR VV WSSMI+ Y +
Sbjct: 275 HGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDC 334
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
SE +++ +MR + NSVTL++++SAC+ +S ++HS I + + LG AL
Sbjct: 335 SEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNAL 394
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+MYAKCG + A VF + EK+L S++ MI+A G HG + + +F M G + D
Sbjct: 395 IDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDD 454
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++F ILSAC+H GLV+E + F + + Y++ ++EHY C ++LL R G I +A+++
Sbjct: 455 MAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTI 513
Query: 361 NMPMEPNAVILRSFLGACRNQGSVPS----LDDKLMSKLESELGANYVLTANVFSTCASW 416
NMPM+P+A I S L AC G + + ++LM K E + ANYVL + + + ++
Sbjct: 514 NMPMKPSARIWSSLLSACETHGRLDVAGKIIANELM-KSEPDNPANYVLLSKIHTESGNY 572
Query: 417 KDASNLRLAMKQKGLKKNPGCSWLE 441
A +R M+++ L K G S +E
Sbjct: 573 HAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH-GGVFHSL 123
++ +II + E++ + + G P + L C R+ S S +FH+L
Sbjct: 115 SYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL 174
Query: 124 TL-KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L + L+ Y A VFD+M V+ V+W++MI+ V + +
Sbjct: 175 VLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEM 234
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKM-VNVSAGESIHSYITRNHVDMSVELGTALF 241
+ +F+ M+ N +PN VTL+S+L AC ++ S + IH + R+ L A
Sbjct: 235 GVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFM 294
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
MY +CG + + ++F + +++ ++ MIS G +V++L QM G++ + +
Sbjct: 295 TMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSV 354
Query: 302 SFSVILSACSHMGLV 316
+ I+SAC++ L+
Sbjct: 355 TLLAIVSACTNSTLL 369
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 161/387 (41%), Gaps = 44/387 (11%)
Query: 88 RLQRSGLSPDNFT--YPFALKACA-RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYA 144
+L+ L + FT P +KACA + G H L LK G D N+L+ YA
Sbjct: 34 KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYA 93
Query: 145 DCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVS 204
R+VFDEM R V++ S+I + EA+ + +EM P S + S
Sbjct: 94 KFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVAS 153
Query: 205 LLSACSKMVNVS-AGESIHSYI-TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPE 262
LL+ C++M + S H+ + + SV L TAL +MY K A VF+ M
Sbjct: 154 LLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEV 213
Query: 263 KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG----LVDE 318
KN S+T MIS + + + LF M+ L+P+ ++ +L AC + LV E
Sbjct: 214 KNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKE 273
Query: 319 ---------------------------GKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
G + R++ + V + M+ A G
Sbjct: 274 IHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGD 333
Query: 352 IQEAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTAN 408
E +++ M +E N+V L + + AC N ++ S + S++ +++L N
Sbjct: 334 CSEVMNLLNQMRKEGIEANSVTLLAIVSACTNS-TLLSFASTVHSQILKCGFMSHILLGN 392
Query: 409 ----VFSTCASWKDASNLRLAMKQKGL 431
+++ C S A + + +K L
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDL 419
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 209/401 (52%), Gaps = 10/401 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG-LSPDNFTYPFALKAC 108
A+ F+ + P + +W ++I + P +L F+++ + P+ +T+ KAC
Sbjct: 83 ARKLFDEM-CEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKAC 141
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV--RTVVT 166
+ ++ G H+ +GL + ++L+ Y C + AR+VFD M R VV+
Sbjct: 142 SALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVS 201
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMR--LANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
W+SMI AY + EA+ +F+ L +++ N L S++SACS + + G+ H
Sbjct: 202 WTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGL 261
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+TR + + + T+L +MYAKCG + A +F + ++ S+T MI A HG +
Sbjct: 262 VTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAA 321
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
+ LF +M + P+ ++ +L ACSH GLV+EG Y M Y + P HY C+VD
Sbjct: 322 VKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVD 381
Query: 345 LLARAGLIQEAYDIIKNMPM--EPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELG 400
+L R G + EAY++ K + + E A++ + L A R G V + + K + + ++
Sbjct: 382 MLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVT 441
Query: 401 ANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
+ Y+ +N ++ W+D+ +LRL MK+ G K CSW+E
Sbjct: 442 SAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 150/324 (46%), Gaps = 40/324 (12%)
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
T F + + ++ + + H+LTLK G +SD +T N L+ Y I AR++FDEM
Sbjct: 31 TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEM 90
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAG 218
VV+W+S+I+ Y P AL +FQ+M PN T S+ ACS + G
Sbjct: 91 CEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIG 150
Query: 219 ESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP--EKNLQSFTIMISALG 276
++IH+ + + + ++ + ++L +MY KC ++ A VF+SM +N+ S+T MI+A
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLS---FSVILSACSHMGLVDEGKMYFDRMVR----- 328
+ + I LF + L D + + ++SACS +G + GK+ + R
Sbjct: 211 QNARGHEAIELFRSF-NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 329 ----------MY--------------NIK-PSVEHYGCMVDLLARAGLIQEAYDIIKNM- 362
MY I+ SV Y M+ A+ GL + A + M
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 363 --PMEPNAVILRSFLGACRNQGSV 384
+ PN V L L AC + G V
Sbjct: 330 AGRINPNYVTLLGVLHACSHSGLV 353
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 214/431 (49%), Gaps = 39/431 (9%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A S F P +WNT+I A + E+L ++ +GL D ++ L +
Sbjct: 212 ALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLS 271
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI----------GF-------- 151
+ SL G H+ LK G S+ + + ++ Y CG + GF
Sbjct: 272 SLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASS 331
Query: 152 -------------ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE--K 196
A+++FD ++ + +V W++M Y+ P L + + +ANE
Sbjct: 332 MIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF-IANETNT 390
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
P+S+ +VS+L ACS + G+ IH + R + M +L TA +MY+KCG ++ A +
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
F+S E++ + MI+ +HG + F M + G KPD ++F +LSAC H GLV
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLV 510
Query: 317 DEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM-PMEPNAVILRSFL 375
EG+ YF M+ YNI P HY CM+DL +A + +A ++++ + +E +AVIL +FL
Sbjct: 511 LEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFL 570
Query: 376 GAC---RNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLK 432
AC +N V +++KL+ +E G+ Y+ AN +++ W + +R M+ K L+
Sbjct: 571 NACSWNKNTELVKEVEEKLLV-IEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELE 629
Query: 433 KNPGCSWLEVQ 443
GCSW +
Sbjct: 630 IFSGCSWANID 640
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 70/285 (24%)
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAA 173
L G + H ++K+G + + N L+ Y+ G + AR VFDEM R V +W+++IAA
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 174 YVGSNS---------------------------------PSEALHVFQEMRLANEKP--- 197
YV N+ SEA+ +F EM +
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 198 NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK------ 251
+ T+ +++ +K+ NV GE +H + + D + ++L MY+KCG K
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 252 ---------------------------KALLVFNSMPEKNLQ-SFTIMISALGNHGCQKD 283
KAL VF PE N S+ +I+ +G +++
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
+ + ME+ GLK D SF +L+ S + + GK R+++
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/403 (19%), Positives = 154/403 (38%), Gaps = 72/403 (17%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSP----TPLESLVFFRRLQRSGLSPDNFTYPFAL 105
A+ F S L +NT++ A + +E R ++ + D+FT +
Sbjct: 73 ARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMV 132
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV- 164
K A+++++ +G H + +KTG + ++L+ Y+ CG +F+ V V
Sbjct: 133 KLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVD 192
Query: 165 ---------------------------------VTWSSMIAAYVGSNSPSEALHVFQEMR 191
++W+++IA Y + EAL + M
Sbjct: 193 SVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME 252
Query: 192 LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK 251
K + + ++L+ S + ++ G+ +H+ + +N + + + + ++Y KCG MK
Sbjct: 253 ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMK 312
Query: 252 -------------------------------KALLVFNSMPEKNLQSFTIMISALGNHGC 280
+A +F+S+ EKNL +T M N
Sbjct: 313 YAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQ 372
Query: 281 QKDVISLFTQ-MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
V+ L + + PD L +L ACS ++ GK +R I +
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLV 431
Query: 340 GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
VD+ ++ G ++ A I + E + V+ + + C + G
Sbjct: 432 TAFVDMYSKCGNVEYAERIF-DSSFERDTVMYNAMIAGCAHHG 473
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 208/397 (52%), Gaps = 4/397 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F +P + +W T+I L + E+L F+ + R + + + + ACA
Sbjct: 178 ALKLFKQMP-GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ G H L +K G + Y +L+ FYA+C IG +R+VFDE V W++
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTA 296
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+++ Y + +AL +F M + PN T S L++CS + + G+ +H +
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG 356
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
++ +G +L MY+ G + A+ VF + +K++ S+ +I HG K +F
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN-IKPSVEHYGCMVDLLAR 348
QM + +PD ++F+ +LSACSH G +++G+ F M N I ++HY CMVD+L R
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMS--KLESELGANYVLT 406
G ++EA ++I+ M ++PN ++ + L ACR V + + L+S+ A YVL
Sbjct: 477 CGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLL 536
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+N++++ W + S LR+ MK+ G+ K PG SW+ ++
Sbjct: 537 SNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIR 573
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 170/421 (40%), Gaps = 55/421 (13%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL-QRSGLSPDNFTYPFALKAC 108
A + F+ +P+ + +WN++I ++ F + +RS +S + + C
Sbjct: 85 ALNLFDEMPVRD-VVSWNSMISGCVECGDMNTAVKLFDEMPERSVVS-----WTAMVNGC 138
Query: 109 ARVSSLSHGG-VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
R + +F+ + +K D N+++ Y G + A ++F +M + V++W
Sbjct: 139 FRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISW 193
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
++MI + EAL +F+ M K S +++AC+ G +H I +
Sbjct: 194 TTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIK 253
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ +L YA C + + VF+ + + +T ++S + +D +S+
Sbjct: 254 LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSI 313
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK---------------MYFDRMVRMYN- 331
F+ M + P+ +F+ L++CS +G +D GK + +V MY+
Sbjct: 314 FSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSD 373
Query: 332 --------------IKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSF 374
K S+ + ++ A+ G + A+ I M EP+ +
Sbjct: 374 SGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGL 433
Query: 375 LGACRNQGSVPSLDDKLMSKLESELG------ANYVLTANVFSTCASWKDASNL--RLAM 426
L AC + G + KL + S + +Y ++ C K+A L R+ +
Sbjct: 434 LSACSHCGFLEK-GRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVV 492
Query: 427 K 427
K
Sbjct: 493 K 493
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 100/245 (40%), Gaps = 48/245 (19%)
Query: 111 VSSLSHGGVFHSLTLKTGLSS-DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+S + HG + S ++ + + N LL D AR+VF+++ V ++
Sbjct: 17 ISHVIHGKCYRSFSVTVEFQNREVLICNHLLSRRID-----EAREVFNQVPSPHVSLYTK 71
Query: 170 MIAAYVGSNSPSEALHVFQEM-------------------------RLANEKPNS--VTL 202
MI Y SN +AL++F EM +L +E P V+
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSW 131
Query: 203 VSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM---YAKCGLMKKALLVFNS 259
++++ C + V E R M V+ A M Y + G + AL +F
Sbjct: 132 TAMVNGCFRSGKVDQAE-------RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS-----HMG 314
MP KN+ S+T MI L + + + LF M +K F+ +++AC+ HMG
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 315 LVDEG 319
+ G
Sbjct: 245 IQVHG 249
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 221/431 (51%), Gaps = 37/431 (8%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG-LSPDNFTYPFALKAC 108
A F+ +P + AW +++ AL + ++L F + S L PD+F + +KAC
Sbjct: 57 ALQVFDEMPHRDHI-AWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKAC 115
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
A + S+ HG H + + ++D ++L+ YA CG + A+ VFD + V+ ++W+
Sbjct: 116 ANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWT 175
Query: 169 SMIAAYVGSNSPSEALH-------------------------------VFQEMRLAN-EK 196
+M++ Y S EAL VF EMR +
Sbjct: 176 AMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDI 235
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
+ + L S++ AC+ + AG +H + D V + AL +MYAKC + A +
Sbjct: 236 LDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDI 295
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
F+ M +++ S+T +I + HG + ++L+ M G+KP+ ++F ++ ACSH+G V
Sbjct: 296 FSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFV 355
Query: 317 DEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLG 376
++G+ F M + Y I+PS++HY C++DLL R+GL+ EA ++I MP P+ + L
Sbjct: 356 EKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Query: 377 ACRNQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKK 433
AC+ QG + D L+S + + + Y+L +N++++ + W S R + + ++K
Sbjct: 416 ACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRK 475
Query: 434 NPGCSWLEVQN 444
+PG S +EV+
Sbjct: 476 DPGHSSVEVRK 486
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 1/189 (0%)
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA 160
Y L+ CAR +L+ H+ +K G+ C NTL+ Y CGA A QVFDEM
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGE 219
R + W+S++ A +N + L VF + ++ +P+ +L+ AC+ + ++ G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
+H + + + ++L +MYAKCGL+ A VF+S+ KN S+T M+S G
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 280 CQKDVISLF 288
+++ + LF
Sbjct: 186 RKEEALELF 194
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
L C++ ++ +++H++I + + L L +Y KCG AL VF+ MP ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 266 QSFTIMISALGNHGCQ-KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK-MYF 323
++ +++AL K + + GL+PD FS ++ AC+++G +D G+ ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME 365
+V Y V+ +VD+ A+ GL+ A + ++ ++
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK 169
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 214 bits (545), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 222/434 (51%), Gaps = 43/434 (9%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L +A+ F+ LP P L A+N +I E L+ +R+ SG D +T LK
Sbjct: 85 LSYARQVFDELP-KPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLK 143
Query: 107 AC-ARVSSL----SHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV 161
A +R S++ S + H+ +K + D L+ Y G + AR VF+ M
Sbjct: 144 ASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKD 203
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQ--------------------------------E 189
VV +SMI+ Y+ +A +F
Sbjct: 204 ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYIS 263
Query: 190 MRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGL 249
M+ A PN T S++ ACS + + G+ +H+ I ++ V +++G++L +MYAKCG
Sbjct: 264 MQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGG 323
Query: 250 MKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+ A VF+ M EKN+ S+T MI G +G ++ + LFT+M++ ++P+ ++F LSA
Sbjct: 324 INDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAV 369
CSH GLVD+G F+ M R Y++KP +EHY C+VDL+ RAG + +A++ + MP P++
Sbjct: 384 CSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD 443
Query: 370 ILRSFLGACRNQGSVP--SLDDKLMSKLESEL--GANYVLTANVFSTCASWKDASNLRLA 425
I + L +C G+V S+ + KL ++ GA Y+ +NV+++ W + S +R
Sbjct: 444 IWAALLSSCNLHGNVELASIAASELFKLNADKRPGA-YLALSNVYASNDKWDNVSKIREV 502
Query: 426 MKQKGLKKNPGCSW 439
MK++ + K G SW
Sbjct: 503 MKRRRISKTIGRSW 516
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 144/336 (42%), Gaps = 41/336 (12%)
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVG 176
G H+ +KTG D LL + CG + +ARQVFDE+ T+ ++ MI+ Y+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK-----MVNVSAGESIHSYITRNHVD 231
E L + Q M + EK + TL +L A + ++ S +H+ I + V+
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 232 MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV------- 284
+ L TAL + Y K G ++ A VF +M ++N+ T MIS N G +D
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 285 -------------------------ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
+ ++ M+ G P+ +F+ ++ ACS + + G
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 320 KMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR 379
+ ++++ + ++ ++D+ A+ G I +A + M E N S +
Sbjct: 293 QQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGINDARRVFDQM-QEKNVFSWTSMIDGYG 350
Query: 380 NQGSVPSLDDKLMSKL-ESELGANYVLTANVFSTCA 414
G+ P +L +++ E + NYV S C+
Sbjct: 351 KNGN-PEEALELFTRMKEFRIEPNYVTFLGALSACS 385
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
Query: 217 AGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
AG+ IH+ I + + + L ++ KCG + A VF+ +P+ L ++ MIS
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
HG K+++ L +M G K DG + S++L A + G R+V IK V
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 337 E----HYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLM 392
E +VD ++G ++ A + + M E N V S + NQG V ++
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDE-NVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 393 SKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKN 434
+ ++ + + + K + ++ ++M++ G N
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPN 272
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 202/394 (51%), Gaps = 4/394 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F S+P P L WN +I + + F +Q G P+ +T
Sbjct: 160 ASKLFCSIP-DPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLI 218
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
S L H+ LK L S Y L+ Y+ C I A VF+ ++ +V SS
Sbjct: 219 DPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSS 278
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I Y + EALH+F E+R++ +KP+ V + +L +C+++ + +G+ +HSY+ R
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+++ +++ +AL +MY+KCGL+K A+ +F +PEKN+ SF +I LG HG FT
Sbjct: 339 LELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFT 398
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
++ +MGL PD ++FS +L C H GL+++G+ F+RM + I+P EHY MV L+ A
Sbjct: 399 EILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMA 458
Query: 350 GLIQEAYDIIKNMPMEPNAVILRSFLGAC---RNQGSVPSLDDKLMSKLESELGANYVLT 406
G ++EA++ + ++ ++ IL + L C N + + + E V+
Sbjct: 459 GKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVML 518
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWL 440
+NV++ W + LR + + K PG SW
Sbjct: 519 SNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 179/387 (46%), Gaps = 10/387 (2%)
Query: 31 NPYLISQ----FLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFF 86
+PY +Q + L+ IS A+ F+ P +F WN+IIRA A + L F
Sbjct: 39 DPYFATQLARFYALNDDLIS---ARKLFDVFP-ERSVFLWNSIIRAYAKAHQFTTVLSLF 94
Query: 87 RRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADC 146
++ RS PDNFTY + + H + + +GL D + ++K Y+
Sbjct: 95 SQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKA 154
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G I A ++F + + W+ MI Y + +++F M+ +PN T+V+L
Sbjct: 155 GLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALT 214
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
S + S+H++ + ++D +G AL MY++C + A VFNS+ E +L
Sbjct: 215 SGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLV 274
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
+ + +I+ G K+ + LF ++ G KPD + +++L +C+ + GK +
Sbjct: 275 ACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYV 334
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPS 386
+R+ ++ ++ ++D+ ++ GL++ A + +P E N V S + G +
Sbjct: 335 IRL-GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSFNSLILGLGLHGFAST 392
Query: 387 LDDKLMSKLESELGANYVLTANVFSTC 413
+K LE L + + + + TC
Sbjct: 393 AFEKFTEILEMGLIPDEITFSALLCTC 419
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 150/327 (45%), Gaps = 22/327 (6%)
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA 160
Y F K R+++ HS K+ L+ D Y L +FYA + AR++FD
Sbjct: 12 YEFTRKIQTRLNTQK----LHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFP 67
Query: 161 VRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
R+V W+S+I AY ++ + L +F ++ ++ +P++ T L S+ +
Sbjct: 68 ERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRC 127
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
IH + + G+A+ + Y+K GL+ +A +F S+P+ +L + +MI G G
Sbjct: 128 IHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGF 187
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVE--- 337
I+LF M+ G +P+ + + S GL+D + V + +K +++
Sbjct: 188 WDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 338 HYGC-MVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA---CRNQGSVPSLDDKL-M 392
+ GC +V++ +R I A + ++ EP+ V S + C N L +L M
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSIS-EPDLVACSSLITGYSRCGNHKEALHLFAELRM 301
Query: 393 SKLESELGANYVLTANVFSTCASWKDA 419
S + + VL A V +CA D+
Sbjct: 302 SGKKPDC----VLVAIVLGSCAELSDS 324
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 178/312 (57%), Gaps = 3/312 (0%)
Query: 132 DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR 191
D + +++ YA G + AR +F+E V WS++I Y + P+EA VF EM
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 192 LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE-LGTALFEMYAKCGLM 250
N KP+ +V L+SACS+M E + SY+ + S + AL +M AKCG M
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
+A +F MP+++L S+ M+ + HGC + I LF +M D G+ PD ++F+VIL C
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC 416
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVI 370
LV+EG YF+ M + Y+I S +HY C+V+LL+R G ++EAY++IK+MP E +A
Sbjct: 417 GQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASA 476
Query: 371 LRSFLGACRNQGS--VPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQ 428
S LG C G+ + + + + +LE + +YVL +N+++ W D ++LR M +
Sbjct: 477 WGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNE 536
Query: 429 KGLKKNPGCSWL 440
G+ K G SW+
Sbjct: 537 NGITKICGRSWI 548
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 20/316 (6%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS-PDNFTYPFALKACARVS 112
F +P +P + WN +I+ +N E++ R+ R+GL+ PD +T+P +K C+
Sbjct: 66 FERVP-SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 113 SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
+ G H L L+ G D + + FY C + AR+VF EM R V+W++++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
AYV S EA +F M N + LV L +VN A + R+ +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWN-ALVDGLVKSGDLVN--AKKLFDEMPKRDIISY 241
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
T++ + YAK G M A +F ++++++ +I +G + +F++M
Sbjct: 242 -----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 293 DMGLKPDGLSFSVILSACSHMG---LVDEGKMYFDRMVRMYNIKPSVEHY--GCMVDLLA 347
+KPD ++SACS MG L ++ Y + + ++ HY ++D+ A
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALIDMNA 351
Query: 348 RAGLIQEAYDIIKNMP 363
+ G + A + + MP
Sbjct: 352 KCGHMDRAAKLFEEMP 367
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 3/218 (1%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS-L 123
AW+ +I A + P E+ F + + PD F + AC+++ S L
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
+ S Y L+ A CG + A ++F+EM R +V++ SM+ SEA
Sbjct: 331 HQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEA 390
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTALFE 242
+ +F++M P+ V +L C + V G + + + + S + + +
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVN 450
Query: 243 MYAKCGLMKKALLVFNSMP-EKNLQSFTIMISALGNHG 279
+ ++ G +K+A + SMP E + ++ ++ HG
Sbjct: 451 LLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHG 488
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 209/405 (51%), Gaps = 45/405 (11%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
S+ AK F+S + L WNT++ A A S E+L F +Q G+ P+ T+ +
Sbjct: 425 SIVDAKKVFDS-TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA----V 161
+ R G + A+ +F +M +
Sbjct: 484 LSLLR-----------------------------------NGQVDEAKDMFLQMQSSGII 508
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
+++W++M+ V + EA+ ++M+ + +PN+ ++ LSAC+ + ++ G +I
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 222 HSYITRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
H YI RN S V + T+L +MYAKCG + KA VF S L MISA +G
Sbjct: 569 HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG 340
K+ I+L+ +E +GLKPD ++ + +LSAC+H G +++ F +V ++KP +EHYG
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 341 CMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKL---ES 397
MVDLLA AG ++A +I+ MP +P+A +++S + +C Q L D L KL E
Sbjct: 689 LMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKT-ELVDYLSRKLLESEP 747
Query: 398 ELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
E NYV +N ++ SW + +R MK KGLKK PGCSW+++
Sbjct: 748 ENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQI 792
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 173/341 (50%), Gaps = 5/341 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A F+ +P + AWN ++ + E++ F +++ G+ P T L
Sbjct: 224 LDDASKVFDEIPDRNAV-AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS 282
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
A A + + G H++ + G+ D +LL FY G I +A VFD M + VVT
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVT 342
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+ +I+ YV +A+++ Q MRL K + VTL +L+SA ++ N+ G+ + Y
Sbjct: 343 WNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
R+ + + L + + +MYAKCG + A VF+S EK+L + +++A G + +
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF M+ G+ P+ +++++I+ + G VDE K F +M + I P++ + M++ +
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGM 521
Query: 347 ARAGLIQEAYDIIKNMP---MEPNAVILRSFLGACRNQGSV 384
+ G +EA ++ M + PNA + L AC + S+
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASL 562
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 173/358 (48%), Gaps = 12/358 (3%)
Query: 30 HNPYLISQFLL-SASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
N Y+ ++ ++ A +L A+ F+ L + +F+W II +L+ F
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRN-VFSWAAIIGVKCRIGLCEGALMGFVE 163
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
+ + + PDNF P KAC + G H +K+GL + ++L Y CG
Sbjct: 164 MLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV 223
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+ A +VFDE+ R V W++++ YV + EA+ +F +MR +P VT+ + LSA
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA 283
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
+ M V G+ H+ N +++ LGT+L Y K GL++ A +VF+ M EK++ ++
Sbjct: 284 SANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTW 343
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
++IS G +D I + M LK D ++ + ++SA + + GK V+
Sbjct: 344 NLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK-----EVQ 398
Query: 329 MYNIKPSVEH----YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
Y I+ S E ++D+ A+ G I +A + + +E + ++ + L A G
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAAYAESG 455
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN--HVDMSVELGTA 239
EAL + EM N + +L C ++S G+ IH+ I +N + + T
Sbjct: 53 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETK 112
Query: 240 LFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPD 299
L YAKC ++ A ++F+ + +N+ S+ +I G + + F +M + + PD
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH----YGCMVDLLARAGLIQEA 355
V+ + C G + + F R V Y +K +E + D+ + G++ +A
Sbjct: 173 NF---VVPNVCKACGALKWSR--FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 356 YDIIKNMPMEPNAV 369
+ +P + NAV
Sbjct: 228 SKVFDEIP-DRNAV 240
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 187/312 (59%), Gaps = 5/312 (1%)
Query: 135 TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
T N L+ Y G + A +F++M V+ +++W++MI Y + EA+ VF +M
Sbjct: 968 TSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
P+ VT+ +++SAC+ + + G+ +H Y +N + V +G+AL +MY+KCG +++AL
Sbjct: 1028 IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 255 LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
LVF ++P+KNL + +I L HG ++ + +F +ME +KP+ ++F + +AC+H G
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 315 LVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSF 374
LVDEG+ + M+ Y+I +VEHYG MV L ++AGLI EA ++I NM EPNAVI +
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 375 LGACRNQGSVPSLD---DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGL 431
L CR ++ + +KLM LE Y L ++++ W+D + +R M++ G+
Sbjct: 1208 LDGCRIHKNLVIAEIAFNKLMV-LEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGI 1266
Query: 432 KK-NPGCSWLEV 442
+K PG S + +
Sbjct: 1267 EKICPGTSSIRI 1278
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 168/385 (43%), Gaps = 76/385 (19%)
Query: 34 LISQFLLSASTIS-LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS 92
L++QF+ + ++ L A S + P +F +N + + P+ SL + R+ R
Sbjct: 807 LMNQFITACTSFKRLDLAVSTMTQMQ-EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD 865
Query: 93 GLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFA 152
+SP ++TY +KA + S G + K G TL+ FY+ G I A
Sbjct: 866 SVSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREA 923
Query: 153 RQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKM 212
R+VFDEM R + W++M++AY ++
Sbjct: 924 RKVFDEMPERDDIAWTTMVSAY-----------------------------------RRV 948
Query: 213 VNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMI 272
+++ + S+ + ++ + S L Y G +++A +FN MP K++ S+T MI
Sbjct: 949 LDMDSANSLANQMSEKNEATS----NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMI 1004
Query: 273 SALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK---MYF------ 323
+ ++ I++F +M + G+ PD ++ S ++SAC+H+G+++ GK MY
Sbjct: 1005 KGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFV 1064
Query: 324 ------DRMVRMYNIKPSVEH---------------YGCMVDLLARAGLIQEAYDIIKNM 362
+V MY+ S+E + +++ LA G QEA + M
Sbjct: 1065 LDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM 1124
Query: 363 PME---PNAVILRSFLGACRNQGSV 384
ME PNAV S AC + G V
Sbjct: 1125 EMESVKPNAVTFVSVFTACTHAGLV 1149
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 2/216 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
+L A+S FN +P+ + +W T+I+ + + E++ F ++ G+ PD T +
Sbjct: 981 NLEQAESLFNQMPVKD-IISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
ACA + L G H TL+ G D Y + L+ Y+ CG++ A VF + + +
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH-SY 224
W+S+I EAL +F +M + + KPN+VT VS+ +AC+ V G I+ S
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
I + +VE + +++K GL+ +AL + +M
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/407 (33%), Positives = 214/407 (52%), Gaps = 34/407 (8%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRL--QRSGLSPDNFTYPFAL---KACARVSSLS 115
P F +NT+++ P +S+ F + S L + T+ F L A S+L
Sbjct: 73 PDKFLFNTLLKC----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALR 128
Query: 116 HGGVFHSLTLKTG-LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAY 174
G + H + K G L TLL FYA G + +AR+VFDEM RT VTW++MI Y
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY 188
Query: 175 V-----GSNSPSEALHVFQEMRLANE--KPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
G+++ +A+ +F+ +P T+V +LSA S+ + G +H YI +
Sbjct: 189 CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEK 248
Query: 228 NHV--DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
++ V +GTAL +MY+KCG + A VF M KN+ ++T M + L +G +
Sbjct: 249 LGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETP 308
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
+L +M + G+KP+ ++F+ +LSA H+GLV+EG F M + + P +EHYGC+VDL
Sbjct: 309 NLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP------------SLDDKLMS 393
L +AG IQEAY I MP++P+A++LRS AC G +D+ +S
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 394 KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWL 440
E E +YV +NV + W + LR MK++ +K PG S++
Sbjct: 429 GSECE---DYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 203/396 (51%), Gaps = 11/396 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL--QRSGLSPDNFTYPFALKA 107
A+ F ++ + L WN ++ + + E+ + + ++ D FT+ L A
Sbjct: 196 ARRVFEAV-LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 108 CARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
C + G H++ K D LL YA + AR+ F+ M VR VV+W
Sbjct: 255 C----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSW 310
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
++MI + + EA+ +F +M L N +P+ +T S+LS+C+K + + + + +T+
Sbjct: 311 NAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTK 370
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ + +L Y++ G + +ALL F+S+ E +L S+T +I AL +HG ++ + +
Sbjct: 371 KGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQM 430
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
F M L+PD ++F +LSACSH GLV EG F RM Y I+ EHY C++DLL
Sbjct: 431 FESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLG 489
Query: 348 RAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD--DKLMSKLESELGANYVL 405
RAG I EA D++ +MP EP+ L +F G C S+ K + ++E NY +
Sbjct: 490 RAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSI 549
Query: 406 TANVFSTCASWKDASNLRLAMKQKGLK-KNPGCSWL 440
+N + + W A+ LR ++ K PGCSWL
Sbjct: 550 LSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 169/365 (46%), Gaps = 22/365 (6%)
Query: 30 HNPYLISQFLLSASTISLPF--AKSFFNSLPITPPLFAWNTIIRALANSPTPLE-----S 82
+N + LL A T F A F+ +P+ + WN +I +
Sbjct: 68 YNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRN-IVTWNILIHGVIQRDGDTNHRAHLG 126
Query: 83 LVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKF 142
+ R+ + +S D+ ++ ++ C +++ G H L +K GL S C+ +L+ F
Sbjct: 127 FCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHF 186
Query: 143 YADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE--KPNSV 200
Y CG I AR+VF+ + R +V W++++++YV + EA + + M + +
Sbjct: 187 YGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T SLLSAC + G+ IH+ + + + + TAL MYAK + A F SM
Sbjct: 247 TFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM 302
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+N+ S+ MI +G ++ + LF QM L+PD L+F+ +LS+C+ + E K
Sbjct: 303 VVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIK 362
Query: 321 MYFDRMVRMYNIKPSVEHYGCMVDLL---ARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
++ M K S + L+ +R G + EA ++ EP+ V S +GA
Sbjct: 363 ----QVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGA 417
Query: 378 CRNQG 382
+ G
Sbjct: 418 LASHG 422
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 102/222 (45%), Gaps = 11/222 (4%)
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
K A + LS H +K G+ + + N LL+ Y A ++FDEM +R +V
Sbjct: 44 KLSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIV 103
Query: 166 TWSSMIAAYVGSNSPSE-----ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
TW+ +I + + + + + + V+ + L+ C+ N+ AG
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ 163
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
+H + + ++ S T+L Y KCGL+ +A VF ++ +++L + ++S+ +G
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 281 QKDVISLFTQM--EDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+ L M + + D +FS +LSAC +++GK
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGK 261
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 197/367 (53%), Gaps = 4/367 (1%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E+ F +QR GL P T+ LKAC+ +L +G H+L K SD + + L+
Sbjct: 341 EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
+ YA G+ Q F + + + +W+SMI +V + A +F+++ ++ +P
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEY 460
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T+ ++SAC+ +S+GE I Y ++ +D + T+ MYAK G M A VF +
Sbjct: 461 TVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV 520
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
++ +++ MIS+L HG + +++F M+ G+KP+ +F +L AC H GLV +G
Sbjct: 521 QNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGL 580
Query: 321 MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR- 379
YF M Y I P+ +H+ C+VDLL R G + +A ++I + + + V R+ L +CR
Sbjct: 581 KYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRV 640
Query: 380 NQGSV--PSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGC 437
+ SV + ++LM +LE E +YVL N+++ A +R M+ +G+KK P
Sbjct: 641 YKDSVIGKRVAERLM-ELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPAL 699
Query: 438 SWLEVQN 444
SW+ + N
Sbjct: 700 SWIVIGN 706
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 141/286 (49%), Gaps = 17/286 (5%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L FA+ F+ +P + ++N++I +++ F + + L D FTY AL
Sbjct: 98 LGFARQLFDRMP-ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
C L G + H L + GLS + N L+ Y+ CG + A +FD R V+
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN---VSAGESIHS 223
W+S+I+ YV + E L++ +M + L S+L AC +N + G +IH
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
Y + ++ + + TAL +MYAK G +K+A+ +F+ MP KN+ ++ MIS Q D
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF----LQMD 332
Query: 284 VIS---------LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
I+ LF M+ GL+P +FSV+L ACS ++ G+
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 154/366 (42%), Gaps = 51/366 (13%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA---RVSSLSHGGVFH 121
+WN++I E L ++ R GL+ + LKAC + G H
Sbjct: 216 SWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH 275
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAY-----VG 176
T K G+ D LL YA G++ A ++F M + VVT+++MI+ + +
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ SEA +F +M+ +P+ T +L ACS + G IH+ I +N+ +
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
G+AL E+YA G + + F S ++++ S+T MI + + LF Q+ +
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 297 KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIK----------------------- 333
+P+ + S+++SAC+ + G+ ++ Y IK
Sbjct: 456 RPEEYTVSLMMSACADFAALSSGE-----QIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 334 ------------PSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSFLGAC 378
P V Y M+ LA+ G EA +I ++M ++PN L AC
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Query: 379 RNQGSV 384
+ G V
Sbjct: 571 CHGGLV 576
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 24/280 (8%)
Query: 97 DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF 156
D+ Y + A+ S+ G + H +K+ L+ Y N LL Y C +GFARQ+F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 157 DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVS 216
D M R +++++S+I+ Y +A+ +F E R AN K + T L C + ++
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLD 165
Query: 217 AGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
GE +H + N + V L L +MY+KCG + +A+ +F+ E++ S+ +IS
Sbjct: 166 LGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYV 225
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS---HMGLVDEG----------KMYF 323
G ++ ++L +M GL + +L AC + G +++G M F
Sbjct: 226 RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
D +VR ++D+ A+ G ++EA + MP
Sbjct: 286 DIVVRT-----------ALLDMYAKNGSLKEAIKLFSLMP 314
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 220/424 (51%), Gaps = 46/424 (10%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ + + +W T+I E+LV++ + R G+ P L A A
Sbjct: 258 AEELFDQIT-EKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYT--DNTLLKFYADCGAI------------------ 149
R S G H +K G DCY T++ FYA I
Sbjct: 317 RSVGSSKGLQLHGTIVKRGF--DCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 150 -----GF--------ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE- 195
GF AR+VFD+ + + +W++MI+ Y S SP ALH+F+EM +++
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 196 KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALL 255
KP+++T+VS+ SA S + ++ G+ H Y+ + + + L A+ +MYAKCG ++ AL
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 256 VFNSMPEKNLQSFTI-----MISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
+F+ KN+ S TI +I HG K + L++ ++ + +KP+ ++F +LSAC
Sbjct: 495 IFHQT--KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVI 370
H GLV+ GK YF+ M + I+P ++HYGCMVDLL +AG ++EA ++IK MP++ + +I
Sbjct: 553 CHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Query: 371 LRSFLGACRNQGSVP--SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQ 428
L A R G+V L ++ ++ G V+ +NV++ W+D + +R M+
Sbjct: 613 WGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRT 672
Query: 429 KGLK 432
+ ++
Sbjct: 673 RDVE 676
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 39/275 (14%)
Query: 104 ALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI-------------- 149
AL +CA + ++ G H LK+GL S+ Y N++L YA C +
Sbjct: 47 ALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLD 106
Query: 150 ---------GFAR--------QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRL 192
G+ R ++FD M R+ V+++++I Y +N SEA+ +F+EMR
Sbjct: 107 SASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRN 166
Query: 193 ANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKK 252
N VTL +++SACS + + + S + ++ V + T L MY C +K
Sbjct: 167 LGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKD 226
Query: 253 ALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSH 312
A +F+ MPE+NL ++ +M++ G + LF Q+ + D +S+ ++ C
Sbjct: 227 ARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE----KDIVSWGTMIDGCLR 282
Query: 313 MGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+DE +Y+ M+R +KPS MVDLL+
Sbjct: 283 KNQLDEALVYYTEMLRC-GMKPSEVM---MVDLLS 313
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 167/435 (38%), Gaps = 102/435 (23%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P ++ T+I+ A + E++ FR ++ G+ + T + AC+
Sbjct: 126 ALKLFDVMP-ERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACS 184
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ + + SL +K L + LL Y C + AR++FDEM R +VTW+
Sbjct: 185 HLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNV 244
Query: 170 MIAAY-------------------------------VGSNSPSEALHVFQEMRLANEKPN 198
M+ Y + N EAL + EM KP+
Sbjct: 245 MLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPS 304
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA------------- 245
V +V LLSA ++ V S G +H I + D L + YA
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFE 364
Query: 246 ------------------KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
K G++++A VF+ +K++ S+ MIS + + L
Sbjct: 365 ASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHL 424
Query: 288 FTQM-EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
F +M +KPD ++ + SA S +G ++EGK D + I P+ ++D+
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMY 483
Query: 347 ARAGLIQEAYDI-------------------------------------IKNMPMEPNAV 369
A+ G I+ A +I ++++P++PN++
Sbjct: 484 AKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSI 543
Query: 370 ILRSFLGACRNQGSV 384
L AC + G V
Sbjct: 544 TFVGVLSACCHAGLV 558
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 207/458 (45%), Gaps = 72/458 (15%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P + WN+++ A+ +++ +R+Q +GL P + L+A A L G
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV------------- 165
H L+ L D Y + TL+ Y G + +AR VFD M + +V
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 166 ----------------------TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLV 203
TW+S+ + Y P +AL V +M+ PN V+
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 204 SLLSACSKMVN-----------------------------------VSAGESIHSYITRN 228
++ S CSK N + +G+ +H + R
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
++ + TAL +MY K G ++ A+ +F + K+L S+ M+ G ++ I+ F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+ M + G++PD ++F+ +LS C + GLV EG YFD M Y I P++EH CMVDLL R
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLT 406
+G + EA+D I+ M ++P+A I +FL +C+ + + K + LE ANY++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 407 ANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
N++S W+D +R M+ ++ SW+++
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQ 643
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 170/369 (46%), Gaps = 40/369 (10%)
Query: 45 ISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFA 104
+SL FA F+ +P L AWN I+ S +++ FR +Q SG + T
Sbjct: 37 VSLGFANKLFDEMPKRDDL-AWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKL 95
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT- 163
L+ C+ + G H L+ GL S+ N+L+ Y+ G + +R+VF+ M R
Sbjct: 96 LQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL 155
Query: 164 ----------------------------------VVTWSSMIAAYVGSNSPSEALHVFQE 189
+VTW+S+++ Y +A+ V +
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 190 MRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGL 249
M++A KP++ ++ SLL A ++ ++ G++IH YI RN + V + T L +MY K G
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 250 MKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+ A +VF+ M KN+ ++ ++S L KD +L +ME G+KPD ++++ + S
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASG 335
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME---P 366
+ +G ++ +M + + P+V + + ++ G + A + M E P
Sbjct: 336 YATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 367 NAVILRSFL 375
NA + + L
Sbjct: 395 NAATMSTLL 403
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 127/238 (53%), Gaps = 2/238 (0%)
Query: 117 GGVFHSLTLKTGL-SSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYV 175
G H +K GL +SD + + FY C ++GFA ++FDEM R + W+ ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
S + +A+ +F+EM+ + K T+V LL CS + G IH Y+ R ++ +V
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG 295
+ +L MY++ G ++ + VFNSM ++NL S+ ++S+ G D I L +ME G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
LKPD ++++ +LS + GL + RM ++ +KPS ++ +A G ++
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLK 242
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 200/405 (49%), Gaps = 3/405 (0%)
Query: 36 SQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS 95
S F L + SL + F +P W ++I E++ F + G S
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMISGFNEYGYLREAIGLFSEMLDDGTS 548
Query: 96 PDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQV 155
PD T L C+ SL G H TL+ G+ + L+ Y+ CG++ ARQV
Sbjct: 549 PDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQV 608
Query: 156 FDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNV 215
+D + V+ SS+I+ Y + +F++M ++ +S + S+L A +
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDES 668
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
S G +H+YIT+ + +G++L MY+K G + F+ + +L ++T +I++
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASY 728
Query: 276 GNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
HG + + ++ M++ G KPD ++F +LSACSH GLV+E + + MV+ Y I+P
Sbjct: 729 AQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPE 788
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMS 393
HY CMVD L R+G ++EA I NM ++P+A++ + L AC+ G V + K
Sbjct: 789 NRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAI 848
Query: 394 KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCS 438
+LE Y+ +N+ + W + R MK G++K PG S
Sbjct: 849 ELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 152/321 (47%), Gaps = 12/321 (3%)
Query: 51 KSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACAR 110
K F +SL + ++ WNTII + F + PD++TY L ACA
Sbjct: 206 KVFRDSL--SANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 111 VSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSM 170
+ L G V + +K G + D + ++ YA CG + A +VF + +VV+W+ M
Sbjct: 264 LEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 171 IAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
++ Y SN AL +F+EMR + + N+ T+ S++SAC + V +H+++ ++
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFT-IMISALGNHGCQKDVISLFT 289
+ + AL MY+K G + + VF + + Q+ +MI++ I LFT
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFT 442
Query: 290 QMEDMGLKPDGLSFSVILSA--CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+M GL+ D S +LS C ++G G +V + S + L +
Sbjct: 443 RMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LFTLYS 496
Query: 348 RAGLIQEAYDIIKNMPMEPNA 368
+ G ++E+Y + + +P + NA
Sbjct: 497 KCGSLEESYKLFQGIPFKDNA 517
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 161/355 (45%), Gaps = 44/355 (12%)
Query: 67 NTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLK 126
N +I + + S P +++ F R+ + GL D F+ L + L+ G H TLK
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLK 478
Query: 127 TGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHV 186
+GL D ++L Y+ CG++ + ++F + + W+SMI+ + EA+ +
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 187 FQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAK 246
F EM P+ TL ++L+ CS ++ G+ IH Y R +D ++LG+AL MY+K
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 247 CGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVI 306
CG +K A V++ +PE + S + +IS HG +D LF M G D + S I
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 307 LSACSHMGLVDEGKM------YFDR------------MVRMYNIKPSVEHYGCMV----- 343
L A + L DE + Y + ++ MY+ S++ C
Sbjct: 659 LKAAA---LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD-CCKAFSQIN 714
Query: 344 --DLLARAGLIQ------------EAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
DL+A LI + Y+++K +P+ V L AC + G V
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLV 769
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 154/317 (48%), Gaps = 10/317 (3%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P P + +W ++ S +L F+ ++ SG+ +N T + AC
Sbjct: 304 AMEVFSRIP-NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACG 362
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF---DEMAVRTVVT 166
R S + H+ K+G D L+ Y+ G I + QVF D++ + +V
Sbjct: 363 RPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV- 421
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
+ MI ++ S P +A+ +F M + + ++ SLLS + ++ G+ +H Y
Sbjct: 422 -NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTL 477
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
++ + + + +G++LF +Y+KCG ++++ +F +P K+ + MIS +G ++ I
Sbjct: 478 KSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIG 537
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF++M D G PD + + +L+ CS + GK +R I ++ +V++
Sbjct: 538 LFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMY 596
Query: 347 ARAGLIQEAYDIIKNMP 363
++ G ++ A + +P
Sbjct: 597 SKCGSLKLARQVYDRLP 613
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
S+ A F+++P P + + N +I ESL FF ++ G + +Y +
Sbjct: 99 SMADAAKLFDTIP-QPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVI 157
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
AC+ + + + T+K G ++ L+ ++ A +VF + V
Sbjct: 158 SACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVY 217
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
W+++IA + + + +F EM + +KP+S T S+L+AC+ + + G+ + + +
Sbjct: 218 CWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARV 277
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
+ + V + TA+ ++YAKCG M +A+ VF+ +P ++ S+T+M+S +
Sbjct: 278 IKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSAL 336
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
+F +M G++ + + + ++SAC +V E
Sbjct: 337 EIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA 370
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 147/320 (45%), Gaps = 16/320 (5%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC 108
A NSL I+P F+ + ++ ++ N L + +P F F ++
Sbjct: 4 LANESLNSLKISP--FSTSRLLSSVTNFRNQLSFSSKDSSSSSAPFNPFRF---FNDQSN 58
Query: 109 ARVSSLSHGGVFHSLTLKTGL-SSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
+R+ +L + + L+ L D + +LL +Y++ G++ A ++FD + VV+
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
+ MI+ Y E+L F +M + N ++ S++SACS + E + + +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF-TIMISALGNHGCQKDVIS 286
+ +AL ++++K + A VF N+ + TI+ AL N V
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQN-YGAVFD 237
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH-YGC--MV 343
LF +M KPD ++S +L+AC+ + K+ F ++V+ IK E + C +V
Sbjct: 238 LFHEMCVGFQKPDSYTYSSVLAACASL-----EKLRFGKVVQARVIKCGAEDVFVCTAIV 292
Query: 344 DLLARAGLIQEAYDIIKNMP 363
DL A+ G + EA ++ +P
Sbjct: 293 DLYAKCGHMAEAMEVFSRIP 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 108/237 (45%), Gaps = 28/237 (11%)
Query: 187 FQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV-DMSVELGTALFEMYA 245
F R N++ NS ++ N+ + + +++ R ++ V L +L Y+
Sbjct: 47 FNPFRFFNDQSNS-----------RLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYS 95
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
G M A +F+++P+ ++ S IMIS H ++ + F++M +G + + +S+
Sbjct: 96 NSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGS 155
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY----GCMVDLLARAGLIQEAYDIIKN 361
++SACS + F +V + IK Y ++D+ ++ ++AY + ++
Sbjct: 156 VISACSAL-----QAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD 210
Query: 362 MPMEPNAVILRSFL-GACRNQ--GSVPSLDDKLMSKLESELGANYVLTANVFSTCAS 415
+ N + + GA RNQ G+V L ++ + Y ++V + CAS
Sbjct: 211 -SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTY---SSVLAACAS 263
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 198/388 (51%), Gaps = 5/388 (1%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQR-SGLSPDNFTYPFALKACARVSSLSHGGV 119
P L +WN+II + + ++++ +RRL R S PD +T+ A+ A A HG +
Sbjct: 364 PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKL 423
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNS 179
H K G + TLL Y A++VFD M R VV W+ MI + +
Sbjct: 424 LHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGN 483
Query: 180 PSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTA 239
A+ F EM + + +L S++ ACS M + GE H R D + + A
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGA 543
Query: 240 LFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPD 299
L +MY K G + A +F+ +L+ + M+ A HG + +S F Q+ + G PD
Sbjct: 544 LVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPD 603
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII 359
+++ +L+ACSH G +GK +++M + IK +HY CMV+L+++AGL+ EA ++I
Sbjct: 604 AVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELI 662
Query: 360 KNMPMEPN-AVILRSFLGACRNQGS--VPSLDDKLMSKLESELGANYVLTANVFSTCASW 416
+ P N A + R+ L AC N + + + + KL+ E A ++L +N+++ W
Sbjct: 663 EQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRW 722
Query: 417 KDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+D + +R ++ K+PG SW+EV N
Sbjct: 723 EDVAEMRRKIRGLASSKDPGLSWIEVNN 750
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 139/283 (49%), Gaps = 10/283 (3%)
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDC---YTDNTLLKFYADCGAIGFARQVFDEMAVR 162
+ C ++ L H+L L G + Y +N L+ Y CG++ AR+VFD+M R
Sbjct: 102 RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHR 161
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVF---QEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
VV+++++ +AY S +P A + F M KPNS T SL+ C+ + +V G
Sbjct: 162 NVVSYNALYSAY--SRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
S++S I + +V + T++ MY+ CG ++ A +F+ + ++ ++ MI +
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
+D + F M G+ P ++S++L+ CS +G GK+ R++ + + +
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARII-VSDSLADLPLD 338
Query: 340 GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
++D+ G ++EA+ + + PN V S + C G
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENG 380
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 148/306 (48%), Gaps = 16/306 (5%)
Query: 31 NPYLISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPT------PLESLV 84
N LIS ++ S L A+ F+ +P + ++N + A + +P PL + +
Sbjct: 135 NNNLISMYVRCGS---LEQARKVFDKMP-HRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 85 FFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYA 144
F ++ P++ T+ ++ CA + + G +S +K G S + ++L Y+
Sbjct: 191 AFEYVK-----PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYS 245
Query: 145 DCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVS 204
CG + AR++FD + R V W++MI + ++ + L F+ M ++ P T
Sbjct: 246 SCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSI 305
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
+L+ CSK+ + S G+ IH+ I + + L AL +MY CG M++A VF + N
Sbjct: 306 VLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPN 365
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGL-KPDGLSFSVILSACSHMGLVDEGKMYF 323
L S+ +IS +G + + ++ ++ M +PD +FS +SA + GK+
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 324 DRMVRM 329
++ ++
Sbjct: 426 GQVTKL 431
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 10/188 (5%)
Query: 134 YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAY----VGSNSPSEALHV--F 187
Y +N L+ Y C ++ AR+VFD+M R +VT + A + +GS+ S+ + + F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 188 QEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTA---LFEMY 244
Q + + ++V L C + + IH+ + + E A L MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALG-NHGCQKDVISLFTQMEDMGLKPDGLSF 303
+CG +++A VF+ MP +N+ S+ + SA N L T M +KP+ +F
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 304 SVILSACS 311
+ ++ C+
Sbjct: 203 TSLVQVCA 210
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 199/419 (47%), Gaps = 38/419 (9%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC-ARVSSLSHGGVFHS 122
FAWN +I A+ L F+ + S PD +T+ + AC A S++ +G + H+
Sbjct: 170 FAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHA 229
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGA----------------------------IGF--- 151
+ LK G SS N++L FY G+ IG
Sbjct: 230 VMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEK 289
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
A +VF + +VTW++MI Y + +AL F EM + + ++L ACS
Sbjct: 290 ALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSG 349
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
+ + G+ IH + +G AL +YAKCG +K+A F + K+L S+ M
Sbjct: 350 LALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTM 409
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN 331
+ A G HG + L+ M G+KPD ++F +L+ CSH GLV+EG M F+ MV+ Y
Sbjct: 410 LFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYR 469
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKN----MPMEPNAVILRSFLGACRNQGSVPSL 387
I V+H CM+D+ R G + EA D+ + N + LGAC
Sbjct: 470 IPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELG 529
Query: 388 DD--KLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ K++ E ++VL +N++ + WK+ ++R M ++G+KK PGCSW+EV N
Sbjct: 530 REVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGN 588
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 167/387 (43%), Gaps = 67/387 (17%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG 93
L S+ A + + A+ F+ +P + AWNT++ + + E++ F +L+ S
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTV-AWNTMLTSYSRLGLHQEAIALFTQLRFSD 65
Query: 94 LSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFAR 153
PD++++ L CA + ++ G SL +++G + +N+L+ Y C A
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 154 QVFDEMAV--RTVVTWSSMIAAYVGSNSPSEALHVFQEM--RLA---------------- 193
+VF +M R VTW S++ AY+ + AL VF EM R+A
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 194 -------------NEKPNSVTLVSLLSACS-KMVNVSAGESIHSYITRNHVDMSVELGTA 239
KP+ T SL++ACS NV G +H+ + +N +VE +
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 240 LFEMYAKCG--------------------------LMK-----KALLVFNSMPEKNLQSF 268
+ Y K G MK KAL VF+ PEKN+ ++
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
T MI+ G +G + + F +M G+ D ++ +L ACS + L+ GKM ++
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEA 355
+ +V+L A+ G I+EA
Sbjct: 366 C-GFQGYAYVGNALVNLYAKCGDIKEA 391
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 99/192 (51%), Gaps = 1/192 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ W T+I + ++L FF + +SG+ D+F Y L AC+ ++ L HG + H
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+ G Y N L+ YA CG I A + F ++A + +V+W++M+ A+ +
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTALF 241
AL ++ M + KP++VT + LL+ CS V G I + +++ + + V+ T +
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 242 EMYAKCGLMKKA 253
+M+ + G + +A
Sbjct: 482 DMFGRGGHLAEA 493
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 220/441 (49%), Gaps = 37/441 (8%)
Query: 34 LISQFL-LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRS 92
L++ F+ + S + +A F+ + P + +N +I+ + PLESL FF ++
Sbjct: 38 LLAHFISICGSLSNSDYANRVFSHIQ-NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSR 96
Query: 93 GLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFA 152
G+ D +TY LK+C+ +S L G H ++TG +++ Y G +G A
Sbjct: 97 GIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDA 156
Query: 153 RQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM---------------------R 191
++VFDEM+ R VV W+ MI + S LH+F++M R
Sbjct: 157 QKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDR 216
Query: 192 LANE----------KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS-VELGTAL 240
A E P+ T+V++L + + + G+ IHS + + + +G AL
Sbjct: 217 EALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNAL 276
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPD 299
+ Y K G ++ A +F M +N+ S+ +IS +G + I LF M E+ + P+
Sbjct: 277 VDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPN 336
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII 359
+F +L+ CS+ G V+ G+ F M+ + ++ EHYG MVDL++R+G I EA+ +
Sbjct: 337 EATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFL 396
Query: 360 KNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG--ANYVLTANVFSTCASWK 417
KNMP+ NA + S L ACR+ G V + M ++ E G NYVL +N+++ W+
Sbjct: 397 KNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQ 456
Query: 418 DASNLRLAMKQKGLKKNPGCS 438
D +R MK+ L+K+ G S
Sbjct: 457 DVEKVRTLMKKNRLRKSTGQS 477
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 207/403 (51%), Gaps = 17/403 (4%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F SL L WNT+I + + ++ ++R+ G+ PD FT+ L
Sbjct: 342 AHKVFESLE-EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL 400
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ L + + +K GLSS N L+ Y+ G I A +F+ + +++W++
Sbjct: 401 DLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNA 457
Query: 170 MIAAYVGSNSPSEALHVFQ-----EMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+I+ + + P E L F E+R+ P++ TL +LLS C ++ G H+Y
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRIL---PDAYTLSTLLSICVSTSSLMLGSQTHAY 514
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ R+ +G AL MY++CG ++ +L VFN M EK++ S+ +ISA HG ++
Sbjct: 515 VLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENA 574
Query: 285 ISLFTQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMV 343
++ + M+D G + PD +FS +LSACSH GLV+EG F+ MV + + +V+H+ C+V
Sbjct: 575 VNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLV 634
Query: 344 DLLARAGLIQEAYDIIK--NMPMEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESEL 399
DLL RAG + EA ++K + + + AC G + + KL+ + E +
Sbjct: 635 DLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDD 694
Query: 400 GANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+ YV +N+++ WK+A R A+ G K GCSW+ +
Sbjct: 695 PSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 163/365 (44%), Gaps = 14/365 (3%)
Query: 39 LLSASTI--SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSP 96
LLSAS + +A F+ +P + WN +I S S+ FR + + G+
Sbjct: 129 LLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRH 188
Query: 97 DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF 156
D F + L C SL G HSL +K G N L+ Y +C + A VF
Sbjct: 189 DKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247
Query: 157 DE--MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN 214
+E +AVR VT++ +I G E+L VF++M A+ +P +T VS++ +CS
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCS---C 303
Query: 215 VSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA 274
+ G +H + + + A MY+ A VF S+ EK+L ++ MIS+
Sbjct: 304 AAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISS 363
Query: 275 LGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKP 334
K +S++ +M +G+KPD +F +L+ + +++ + + +
Sbjct: 364 YNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSS 419
Query: 335 SVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSK 394
+E ++ ++ G I++A D++ + N + + + + G ++
Sbjct: 420 KIEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCL 478
Query: 395 LESEL 399
LESE+
Sbjct: 479 LESEV 483
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 151/319 (47%), Gaps = 11/319 (3%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
+N +I LA ESL+ FR++ + L P + T+ + +C S + G H L +
Sbjct: 260 FNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAI 315
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
KTG N + Y+ G A +VF+ + + +VTW++MI++Y + A+
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
V++ M + KP+ T SLL+ +++ E + + I + + +E+ AL Y+
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLLATS---LDLDVLEMVQACIIKFGLSSKIEISNALISAYS 432
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM--EDMGLKPDGLSF 303
K G ++KA L+F KNL S+ +IS ++G + + F+ + ++ + PD +
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTL 492
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
S +LS C + G ++R K ++ ++++ ++ G IQ + ++ M
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIG-NALINMYSQCGTIQNSLEVFNQMS 551
Query: 364 MEPNAVILRSFLGACRNQG 382
E + V S + A G
Sbjct: 552 -EKDVVSWNSLISAYSRHG 569
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 119/288 (41%), Gaps = 39/288 (13%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQR-SGLSPDNFTYPFALKACARVSSLSHGG 118
+ L N + L S +L F + R + L PD ++ A+ + GG
Sbjct: 18 STTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGG 77
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYA-------------------------------DCG 147
H +++GL + NTLL Y G
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 148 AIGFARQVFDEMAVR-TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
I +A +VFD+M R V W++MI S ++ +F+EM + + ++L
Sbjct: 138 DIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATIL 197
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS--MPEKN 264
S C ++ G+ +HS + + ++ + AL MY C ++ A LVF + ++
Sbjct: 198 SMCD-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 265 LQSFTIMISALGNHGCQKD-VISLFTQMEDMGLKPDGLSFSVILSACS 311
+F ++I L G ++D + +F +M + L+P L+F ++ +CS
Sbjct: 257 QVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 213/418 (50%), Gaps = 38/418 (9%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L+ N + +A S +P ++L F+ + R G PD++T+ + + + G + H
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHG 142
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF-------------------------- 156
+K G N+L+ Y CGA+ A+++F
Sbjct: 143 QAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 157 -----DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
DEM + +++W+ MI+AY+G+N+P ++ +F+EM A + N TLV LL+AC +
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
+ G S+H+ + R ++ SV + TAL +MY KC + A +F+S+ +N ++ +M
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN 331
I A HG + + LF M + L+PD ++F +L C+ GLV +G+ Y+ MV +
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME---PNAVILRSFLGACRNQGSVPSLD 388
IKP+ H CM +L + AG +EA + +KN+P E P + + L + R G+ P+L
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN-PTLG 441
Query: 389 DKLMSKLESELGANYV---LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+ + L NY L N++S W+D + +R +K++ + + PGC ++++
Sbjct: 442 ESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 4/218 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P + +WN +I A + P S+ FR + R+G + T L AC
Sbjct: 203 AHKLFDEMP-DKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACG 261
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
R + L G H+ ++T L+S D L+ Y C +G AR++FD +++R VTW+
Sbjct: 262 RSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNV 321
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI A+ P L +F+ M +P+ VT V +L C++ VS G+S +S + +
Sbjct: 322 MILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV-DE 380
Query: 230 VDMSVELGT--ALFEMYAKCGLMKKALLVFNSMPEKNL 265
+ G + +Y+ G ++A ++P++++
Sbjct: 381 FQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDV 418
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 205/383 (53%), Gaps = 14/383 (3%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG-GVFH 121
+ +WN++I+A + + + F +++ D ++ + VS + +F
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
+ + D ++ N ++ YA G + AR F++ + V+W+S+IAAY +
Sbjct: 337 EMP-----NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYK 391
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
EA+ +F M + EKP+ TL SLLSA + +VN+ G +H + + + V + AL
Sbjct: 392 EAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALI 450
Query: 242 EMYAKCGLMKKALLVFNSMP-EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
MY++CG + ++ +F+ M ++ + ++ MI HG + ++LF M+ G+ P
Sbjct: 451 TMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSH 510
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++F +L+AC+H GLVDE K F M+ +Y I+P +EHY +V++ + G +EA II
Sbjct: 511 ITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIIT 570
Query: 361 NMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKD 418
+MP EP+ + + L ACR N + + + MS+LE E YVL N+++ W +
Sbjct: 571 SMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDE 630
Query: 419 ASNLRLAMKQKGLKKNPGCSWLE 441
AS +R+ M+ K +KK G SW++
Sbjct: 631 ASQVRMNMESKRIKKERGSSWVD 653
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 172/428 (40%), Gaps = 61/428 (14%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL-QRS 92
+IS ++ L A+ F+ +P + F+WNT+I A + E+L+ F ++ +R+
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMP-SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 93 GLSPDNFTYPFALKA--------------------CARVSSLSHG----------GVFHS 122
+S F CA V+ L G + S
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA---------------VRTVVTW 167
L +G Y NTL+ Y G + AR +FD++ + VV+W
Sbjct: 227 LV--SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
+SMI AY+ A +F +M+ + +S + V+VS E + +
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMKDRD-------TISWNTMIDGYVHVSRMEDAFALFS- 336
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ + YA G ++ A F PEK+ S+ +I+A + K+ + L
Sbjct: 337 EMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDL 396
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVD-EGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
F +M G KPD + + +LSA + GLV+ M ++V + + P V + ++ +
Sbjct: 397 FIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIV-VKTVIPDVPVHNALITMY 453
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLT 406
+R G I E+ I M ++ + + +G G+ + S + + +++
Sbjct: 454 SRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 407 ANVFSTCA 414
+V + CA
Sbjct: 514 VSVLNACA 521
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G I AR +F+++ R VTW++MI+ YV ++A +F M K + VT +++
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNTMI 109
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
S + E S T + YAK + +ALL+F MPE+N
Sbjct: 110 SGYVSCGGIRFLEEARKLFDEMPSRDSFSWNT-MISGYAKNRRIGEALLLFEKMPERNAV 168
Query: 267 SFTIMISALGNHGCQKDVISLFTQM 291
S++ MI+ +G + LF +M
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKM 193
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 44/320 (13%)
Query: 130 SSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQE 189
S D ++ NT++ YA IG A +F++M R V+WS+MI + + A+ +F++
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 190 MRLANEKPNSVTLVSLLSACSKMVNVSAGESI---HSYITRNHVDMSVELGTALFEMYAK 246
M + + P L +L++ K +S + + + D+ T L Y +
Sbjct: 193 MPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNT-LIVGYGQ 247
Query: 247 CGLMKKALLVFNSMPE---------------KNLQSFTIMISALGNHGCQKDVIS---LF 288
G ++ A +F+ +P+ KN+ S+ MI A G DV+S LF
Sbjct: 248 RGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVG---DVVSARLLF 304
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
QM+D D +S++ ++ H+ +++ F M + MV A
Sbjct: 305 DQMKD----RDTISWNTMIDGYVHVSRMEDAFALFSEMP-----NRDAHSWNMMVSGYAS 355
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGAC-RNQGSVPSLDDKLMSKLESELGANYVLTA 407
G ++ A + P E + V S + A +N+ ++D + +E E + LT+
Sbjct: 356 VGNVELARHYFEKTP-EKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTS 414
Query: 408 NVFSTCASWKDASNLRLAMK 427
+ ++ NLRL M+
Sbjct: 415 LLSASTG----LVNLRLGMQ 430
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/414 (30%), Positives = 215/414 (51%), Gaps = 40/414 (9%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
+NT+IR+ + SL F + S + P+N T+P +KA S+S+G H L
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE--------------------------- 158
K G D + + ++FY + G + +R++FD+
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 159 ----MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK----PNSVTLVSLLSACS 210
M V VV+W+++I + ++AL VF EM + NE+ PN T VS+LS+C+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM-IQNERAVITPNEATFVSVLSSCA 232
Query: 211 KMVN--VSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
+ G+ IH Y+ + ++ LGTAL +MY K G ++ AL +F+ + +K + ++
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
+ISAL ++G K + +F M+ + P+G++ IL+AC+ LVD G F +
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPS 386
Y I P+ EHYGC+VDL+ RAGL+ +A + I+++P EP+A +L + LGAC+ + +
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 387 LDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWL 440
K + L+ + YV + + ++W +A +R AM + G++K P S L
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 123/309 (39%), Gaps = 76/309 (24%)
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
+T ++++I +Y+ + +L +F M ++ +PN++T SL+ A +VS G ++
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 222 HS-----------YITRNHVDMSVELG--------------------TALFEMYAKCGLM 250
H ++ + V E+G +L + + G M
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM---EDMGLKPDGLSFSVIL 307
A F MP ++ S+T +I+ G + +F +M E + P+ +F +L
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 308 SACSHMGLVDEGKMYFDRMVRMYNIKPSV-----------EHYGCMVDL----------- 345
S+C++ D+G + + + Y + + + YG DL
Sbjct: 229 SSCANF---DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 346 -------------LARAGLIQEA---YDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD 389
LA G ++A ++++K+ + PN + L + L AC + + L
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACA-RSKLVDLGI 344
Query: 390 KLMSKLESE 398
+L S + SE
Sbjct: 345 QLFSSICSE 353
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 175/308 (56%), Gaps = 2/308 (0%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N ++ + + G I AR+VFD M R TW MI AY EAL +F +M+ +
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
P+ +L+S+LS C+ + ++ G +H+++ R D V + + L MY KCG + KA LV
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
F+ K++ + +IS +HG ++ + +F +M G P+ ++ IL+ACS+ G +
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 317 DEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLG 376
+EG F+ M + + P+VEHY C VD+L RAG + +A ++I++M ++P+A + + LG
Sbjct: 449 EEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLG 508
Query: 377 ACRNQG--SVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKN 434
AC+ + + K + + E + YVL +++ ++ + W D + +R M+ + K
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF 568
Query: 435 PGCSWLEV 442
PGCSW+EV
Sbjct: 569 PGCSWIEV 576
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 133/289 (46%), Gaps = 29/289 (10%)
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTLLKFYADCG 147
L+R+ L+ F + +R+ ++ F SL K S N+++ Y G
Sbjct: 8 LRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSW-----NSIVSGYFSNG 62
Query: 148 AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS 207
ARQ+FDEM+ R VV+W+ +++ Y+ + EA +VF+ M + N V+ +++
Sbjct: 63 LPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM----PERNVVSWTAMVK 118
Query: 208 ACSKMVNVSAGESIHSYI-TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
+ V ES+ + RN V +V G + + G + KA +++ MP K++
Sbjct: 119 GYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDD-----GRIDKARKLYDMMPVKDVV 173
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
+ T MI L G + +F +M + + ++++ +++ VD + F+ M
Sbjct: 174 ASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEP----NAVIL 371
+ + M+ +G I++A + + MPM+P NA+I+
Sbjct: 230 PEKTEVS-----WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV 273
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 219/418 (52%), Gaps = 8/418 (1%)
Query: 29 DHNPYLISQFL-LSASTISLPFAKSFFNS--LPITPPLFAWNTIIRALANSPTPLESLVF 85
+ +P+ IS + + ++ SL +A F+ L + + WN+++ + +L
Sbjct: 270 ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWL 329
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
++ +S L D++T ALK C +L G HSL + +G D + L+ +A+
Sbjct: 330 LLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHAN 389
Query: 146 CGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
G I A ++F + + ++ +S +I V S S A ++F+E+ + + ++
Sbjct: 390 VGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNI 449
Query: 206 LSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL 265
L CS + ++ G+ IH + + TAL +MY KCG + +++F+ M E+++
Sbjct: 450 LKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDV 509
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
S+T +I G +G ++ F +M ++G++P+ ++F +LSAC H GL++E + +
Sbjct: 510 VSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLET 569
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC---RNQG 382
M Y ++P +EHY C+VDLL +AGL QEA ++I MP+EP+ I S L AC +N G
Sbjct: 570 MKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAG 629
Query: 383 SVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWL 440
V + +KL+ + Y +N ++T W S +R A K+ G K++ G SW+
Sbjct: 630 LVTVIAEKLLKGFPDDPSV-YTSLSNAYATLGMWDQLSKVREAAKKLGAKES-GMSWI 685
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 189/419 (45%), Gaps = 54/419 (12%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A + F+ +P P + +WN +I + +P +L F R+QR GL D F P LKAC+
Sbjct: 192 AVTLFHRMP-QPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF--DEMAVR-TVVT 166
L+ G H +K+GL S + + L+ Y++CG++ +A VF +++AV +V
Sbjct: 250 FGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAV 309
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+SM++ ++ + AL + ++ ++ +S TL L C VN+ G +HS +
Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVV 369
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+ ++ +G+ L +++A G ++ A +F+ +P K++ +F+ +I G
Sbjct: 370 VSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFY 429
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHM--------------------------------- 313
LF ++ +GL D S IL CS +
Sbjct: 430 LFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYV 489
Query: 314 --GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK---NMPMEPNA 368
G +D G + FD M+ + V G +V + G ++EA+ N+ +EPN
Sbjct: 490 KCGEIDNGVVLFDGMLE----RDVVSWTGIIVG-FGQNGRVEEAFRYFHKMINIGIEPNK 544
Query: 369 VILRSFLGACRNQGSVPSLDDKLMSKLESELG-----ANYVLTANVFSTCASWKDASNL 422
V L ACR+ G + L ++SE G +Y ++ +++A+ L
Sbjct: 545 VTFLGLLSACRHSGLLEEARSTL-ETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANEL 602
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 136/299 (45%), Gaps = 34/299 (11%)
Query: 104 ALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT 163
L+ C +V + G + +K G+S + + N ++ Y D + A +VFDEM+ R
Sbjct: 11 GLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERN 70
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK-PNSVTLVSLLSACSKMVNVSAGESIH 222
+VTW++M++ Y P++A+ +++ M + E+ N ++L AC + ++ G ++
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 223 SYITRNH-----------VDMSVELG--------------------TALFEMYAKCGLMK 251
I + + VDM V+ G L Y K GLM
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 252 KALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS 311
+A+ +F+ MP+ N+ S+ +IS + G + + +M+ GL DG + L ACS
Sbjct: 191 EAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACS 249
Query: 312 HMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVI 370
GL+ GK +V+ ++ S ++D+ + G + A D+ + N+ +
Sbjct: 250 FGGLLTMGKQLHCCVVKS-GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 159/393 (40%), Gaps = 48/393 (12%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDN-FTYPFALKACARVSSLSHGGVFH 121
+ W T++ + P +++ +RR+ S N F Y LKAC V + G + +
Sbjct: 71 IVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
K L D N+++ Y G + A F E+ + +W+++I+ Y +
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMD 190
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLS---------------------------------- 207
EA+ +F M +PN V+ L+S
Sbjct: 191 EAVTLFHRM----PQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 208 ACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP---EKN 264
ACS ++ G+ +H + ++ ++ S +AL +MY+ CG + A VF+ +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC-SHMGLVDEGKMYF 323
+ + M+S + + + L Q+ L D + S L C +++ L +++
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS 383
+V Y + V +VDL A G IQ+A+ + +P + + + C G
Sbjct: 367 LVVVSGYELDYIVG--SILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSG- 422
Query: 384 VPSLDDKLMSKL-ESELGANYVLTANVFSTCAS 415
SL L +L + L A+ + +N+ C+S
Sbjct: 423 FNSLAFYLFRELIKLGLDADQFIVSNILKVCSS 455
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 199/380 (52%), Gaps = 3/380 (0%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
W +I L ++L+ F + +SG + + +CA++ S G H L
Sbjct: 314 WTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVL 373
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
+ G + D N+L+ YA CG + + +F+ M R +V+W+++I+ Y + +AL
Sbjct: 374 RHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALL 433
Query: 186 VFQEMRLAN-EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
+F+EM+ ++ +S T+VSLL ACS + G+ IH + R+ + + TAL +MY
Sbjct: 434 LFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMY 493
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
+KCG ++ A F+S+ K++ S+ I+I+ G HG + ++++ G++P+ + F
Sbjct: 494 SKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFL 553
Query: 305 VILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM 364
+LS+CSH G+V +G F MVR + ++P+ EH C+VDLL RA I++A+ K
Sbjct: 554 AVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFT 613
Query: 365 EPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELG--ANYVLTANVFSTCASWKDASNL 422
P+ +L L ACR G D +E + G +YV + F+ W D S
Sbjct: 614 RPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSES 673
Query: 423 RLAMKQKGLKKNPGCSWLEV 442
M+ GLKK PG S +E+
Sbjct: 674 WNQMRSLGLKKLPGWSKIEM 693
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 153/299 (51%), Gaps = 6/299 (2%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
+N+ I L++ + L F + + L PD FT+P LKACA + LS G H L
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
G SSD Y ++L+ YA G + AR+VF+EM R VV W++MI Y + EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
+ EMR KP VTL+ +LS ++ ++ + +H + D + + ++ +Y
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
KC + A +F+ M ++++ S+ MIS + G +++ L +M GL+PD +F
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 306 ILSACSHMGLVDEGKMYFDRMVRM-YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
LS M ++ G+M ++V+ +++ ++ ++ + + G + +Y +++ +P
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK--TALITMYLKCGKEEASYRVLETIP 307
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 165/370 (44%), Gaps = 37/370 (10%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
AK F+ + + +WNT+I A+ E L R++ GL PD T+ +L
Sbjct: 198 AKDLFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSG 256
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ L G + H +KTG D + L+ Y CG + +V + + + VV W+
Sbjct: 257 TMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTV 316
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI+ + +AL VF EM + +S + S++++C+++ + G S+H Y+ R+
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG 376
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ +L MYAKCG + K+L++F M E++L S+ +IS + + LF
Sbjct: 377 YTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFE 436
Query: 290 QMEDMGLKP-DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+M+ ++ D + +L ACS G + GK+ ++R + I+P +VD+ ++
Sbjct: 437 EMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSK 495
Query: 349 AGLIQ----------------------------------EAYDIIKNMPMEPNAVILRSF 374
G ++ E Y + MEPN VI +
Sbjct: 496 CGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAV 555
Query: 375 LGACRNQGSV 384
L +C + G V
Sbjct: 556 LSSCSHNGMV 565
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 148/334 (44%), Gaps = 12/334 (3%)
Query: 36 SQFLLSASTISL-------PFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR 88
S F +S+S ++L A+ F + + W +I + + E+
Sbjct: 79 SDFYISSSLVNLYAKFGLLAHARKVFEEMR-ERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 89 LQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
++ G+ P T L ++ L H + G D N++L Y C
Sbjct: 138 MRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+G A+ +FD+M R +V+W++MI+ Y + SE L + MR +P+ T + LS
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSV 254
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
M ++ G +H I + D+ + L TAL MY KCG + + V ++P K++ +
Sbjct: 255 SGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCW 314
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
T+MIS L G + + +F++M G + + ++++C+ +G D G ++R
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR 374
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+ ++ + A+ G + ++ I + M
Sbjct: 375 -HGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 200/367 (54%), Gaps = 4/367 (1%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E L R+ +N TY +L+ + + L+ HS ++ G +++ L+
Sbjct: 220 EGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALI 279
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
Y CG + +A++VFD+ + + ++++ AY S EAL++F +M PN
Sbjct: 280 NMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEY 339
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T LL++ +++ + G+ +H + ++ V +G AL MYAK G ++ A F+ M
Sbjct: 340 TFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGM 399
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+++ ++ MIS +HG ++ + F +M G P+ ++F +L ACSH+G V++G
Sbjct: 400 TFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGL 459
Query: 321 MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC-- 378
YF+++++ ++++P ++HY C+V LL++AG+ ++A D ++ P+E + V R+ L AC
Sbjct: 460 HYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYV 519
Query: 379 -RNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGC 437
RN + + + K ++ G YVL +N+ + W+ + +R M +G+KK PG
Sbjct: 520 RRNYRLGKKVAEYAIEKYPNDSGV-YVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGV 578
Query: 438 SWLEVQN 444
SW+ ++N
Sbjct: 579 SWIGIRN 585
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 161/336 (47%), Gaps = 8/336 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS-PDNFTYPFALKAC 108
A+ F+ +P + +W +++ NS E L F+ + SG S P+ F K+C
Sbjct: 88 ARKLFDLMP-ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSC 146
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
+ + G FH LK GL S + NTL+ Y+ C G A +V D++ + +S
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEK--PNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
S ++ Y+ + E L V + + ANE N++T +S L S + +++ +HS +
Sbjct: 207 SALSGYLECGAFKEGLDVLR--KTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV 264
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
R + VE AL MY KCG + A VF+ +N+ T ++ A ++ ++
Sbjct: 265 RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALN 324
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
LF++M+ + P+ +F+++L++ + + L+ +G + +V + V +V++
Sbjct: 325 LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDL-LHGLVLKSGYRNHVMVGNALVNMY 383
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
A++G I++A M + V + + C + G
Sbjct: 384 AKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 8/278 (2%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSS---DCYTDNTLLKFYADCGAIGFARQVFDEMAV 161
LK CA S L G H+ + T SS D Y N+L+ Y C AR++FD M
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGES 220
R VV+W +M+ Y S E L +F+ M + E +PN + +CS + G+
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQ 157
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
H + + + L MY+ C +A+ V + +P +L F+ +S G
Sbjct: 158 FHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGA 217
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG 340
K+ + + + + + L++ L S++ ++ RMVR + VE G
Sbjct: 218 FKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVR-FGFNAEVEACG 276
Query: 341 CMVDLLARAGLI---QEAYDIIKNMPMEPNAVILRSFL 375
++++ + G + Q +D + N I+ ++
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYF 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG---TALFEMYAKCGLMKKALLVFN 258
L LL C+ + GESIH+++ + E +L +Y KC +A +F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 259 SMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL-KPDGLSFSVILSACSHMGLVD 317
MPE+N+ S+ M+ N G +V+ LF M G +P+ +V+ +CS+ G ++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 318 EGKMY 322
EGK +
Sbjct: 154 EGKQF 158
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 210/416 (50%), Gaps = 6/416 (1%)
Query: 33 YLISQFLLSASTISLPF-AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR 91
Y++++ LL + A+ F+ +P L+++ +II N +E+ F+ +
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIP-ERNLYSYYSIISGFVNFGNYVEAFELFKMMWE 217
Query: 92 SGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
+ T+ L+A A + S+ G H LK G+ + + L+ Y+ CG I
Sbjct: 218 ELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIED 277
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
AR F+ M +T V W+++IA Y EAL + +MR + + TL ++ +K
Sbjct: 278 ARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTK 337
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
+ + + H+ + RN + + TAL + Y+K G + A VF+ +P KN+ S+ +
Sbjct: 338 LAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNAL 397
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN 331
+ NHG D + LF +M + P+ ++F +LSAC++ GL ++G F M ++
Sbjct: 398 MGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHG 457
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP---SLD 388
IKP HY CM++LL R GL+ EA I+ P++ + + L ACR Q ++ +
Sbjct: 458 IKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVA 517
Query: 389 DKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+KL +LG NYV+ N++++ +A+ + ++ KGL P C+W+EV +
Sbjct: 518 EKLYGMGPEKLG-NYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGD 572
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 139/315 (44%), Gaps = 2/315 (0%)
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
TY ++AC R+ S+ + + G + Y N +L + CG I AR++FDE+
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
R + ++ S+I+ +V + EA +F+ M + T +L A + + ++ G+
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
+H + V + + L +MY+KCG ++ A F MPEK ++ +I+ HG
Sbjct: 245 QLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHG 304
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
++ + L M D G+ D + S+++ + + ++ K ++R + +
Sbjct: 305 YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRN-GFESEIVAN 363
Query: 340 GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESEL 399
+VD ++ G + A + +P N + + +G N G + + +
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 400 GANYVLTANVFSTCA 414
N+V V S CA
Sbjct: 423 APNHVTFLAVLSACA 437
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 213/459 (46%), Gaps = 72/459 (15%)
Query: 53 FFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVS 112
F NS P F N +IR L + S+ F + R G+ PD T+PF LK+ +++
Sbjct: 83 FRNSEERNP--FVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 113 SLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE-------------- 158
G H+ TLK + D + +L+ YA G + A QVF+E
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 159 ---------------------MAVRTVVTWSSMIAAYVGSNSPSEALHVFQ--------- 188
M R +WS++I YV S + A +F+
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260
Query: 189 ----------------------EMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
EM KPN T+ ++LSACSK + +G IH YI
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
N + + +GTAL +MYAKCG + A VF++M K++ S+T MI HG I
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQ 380
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
F QM G KPD + F +L+AC + VD G +FD M Y I+P+++HY +VDLL
Sbjct: 381 CFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLL 440
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS---VPSLDDKLMSKLESELGANY 403
RAG + EA+++++NMP+ P+ + AC+ S+ L+ +L+ EL +Y
Sbjct: 441 GRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLL-ELDPELCGSY 499
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
+ ++ + +D RL+++++ +++ G S++E+
Sbjct: 500 IFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIEL 538
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 116/266 (43%), Gaps = 35/266 (13%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
AK F +P + +W T+I + + ++ + + GL P+ +T L AC+
Sbjct: 246 AKQLFELMP-EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACS 304
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ +L G H L G+ D L+ YA CG + A VF M + +++W++
Sbjct: 305 KSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTA 364
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI + +A+ F++M + EKP+ V +++L+AC +N S
Sbjct: 365 MIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC---LNSS------------- 408
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
V+LG F+ + + E L+ + +++ LG G + L
Sbjct: 409 ---EVDLGLNFFDS-----------MRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL-- 452
Query: 290 QMEDMGLKPDGLSFSVILSAC-SHMG 314
+E+M + PD +++ + AC +H G
Sbjct: 453 -VENMPINPDLTTWAALYRACKAHKG 477
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 225/436 (51%), Gaps = 43/436 (9%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P + A I R + S +E+ F+RL G+ P+ FT+ + +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKES-RHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE----------- 158
+ G H LK GL+S+ + + +L Y + AR+ FD+
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 159 --------------------MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKP 197
M R+VVTW+++I + + EA++ F +M R P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 198 NSVTLVSLLSACSKMVNVSAGESIHS-YITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
N T ++A S + + AG+SIH+ I +V + +L Y+KCG M+ +LL
Sbjct: 225 NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLA 284
Query: 257 FNSMPE--KNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPDGLSFSVILSACSHM 313
FN + E +N+ S+ MI ++G ++ +++F +M +D L+P+ ++ +L AC+H
Sbjct: 285 FNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHA 344
Query: 314 GLVDEGKMYFDRMVRMYNIKPSV---EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVI 370
GL+ EG MYF++ V Y+ P++ EHY CMVD+L+R+G +EA ++IK+MP++P
Sbjct: 345 GLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGF 403
Query: 371 LRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQ 428
++ LG C+ + + L + +L+ ++YV+ +N +S +W++ S +R MK+
Sbjct: 404 WKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKE 463
Query: 429 KGLKKNPGCSWLEVQN 444
GLK+ GCSW+EV++
Sbjct: 464 TGLKRFTGCSWIEVRD 479
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 143 YADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTL 202
+ D I A +VFDE+ V++ +++I +V + EA F+ + +PN T
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 203 VSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPE 262
+++ + + +V G+ +H Y + + +V +G+A+ Y K + A F+ +
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 263 KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMY 322
N+ S T +IS ++ +SLF M + + ++++ ++ S G +E
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNT 212
Query: 323 FDRMVRMYNIKPSVEHYGCMV 343
F M+R + P+ + C +
Sbjct: 213 FVDMLREGVVIPNESTFPCAI 233
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 197 bits (502), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 205/392 (52%), Gaps = 17/392 (4%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
F LPI + A+N + + ++ ++ ++ G+ PD+ T L+ CA S
Sbjct: 459 FERLPIKDAV-AFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSD 517
Query: 114 LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV-RTVVTWSSMIA 172
+ G + +K G S+C+ + L+ + C A+ A +FD+ ++ V+W+ M+
Sbjct: 518 YARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
Y+ EA+ F++M++ +PN+VT V+++ A +++ + G S+HS + +
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS 637
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
+G +L +MYAKCG+++ + F + K + S+ M+SA HG +SLF M+
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
+ LKPD +SF +LSAC H GLV+EGK F+ M + I+ VEHY CMVDLL +AGL
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLF 757
Query: 353 QEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKL--MSKLESELGANYVLTANVF 410
EA ++++ M ++ + + + L + R ++ + L + KLE L + +
Sbjct: 758 GEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNPSHY 810
Query: 411 STCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
S + +N+ +KK P CSW+EV
Sbjct: 811 SQDRRLGEVNNV------SRIKKVPACSWIEV 836
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 170/364 (46%), Gaps = 37/364 (10%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL-QRSGLSPDNFTYPFALKA 107
++ F+S+ P + WN++IR + E+L FF + + G+ PD +++ FALKA
Sbjct: 51 LSRVIFDSVR-DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKA 109
Query: 108 CARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
CA G H L + GL SD Y L++ Y + ARQVFD+M V+ VVTW
Sbjct: 110 CAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTW 169
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
++M++ + S AL +F +MR + V+L +L+ A SK+ +H + +
Sbjct: 170 NTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK 229
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ G L +MY C + A VF + K+ S+ M++A ++G ++V+ L
Sbjct: 230 KGFIFAFSSG--LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLEL 287
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR---------------MY-- 330
F M + ++ + ++ + L A +++G + +G D V+ MY
Sbjct: 288 FDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSK 347
Query: 331 ------------NIKP-SVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSF 374
NI+ V + M+ +AG EA + ++M ++PNAV L S
Sbjct: 348 CGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSV 407
Query: 375 LGAC 378
L C
Sbjct: 408 LQGC 411
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 128/264 (48%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+W T++ A A++ E L F ++ + + AL+A A V L G H
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYA 326
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
++ GL D +L+ Y+ CG + A Q+F + R VV+WS+MIA+Y + EA+
Sbjct: 327 VQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAI 386
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
+F++M + KPN+VTL S+L C+ + G+SIH Y + ++ +E TA+ MY
Sbjct: 387 SLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMY 446
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
AKCG AL F +P K+ +F + G ++ M+ G+ PD +
Sbjct: 447 AKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMV 506
Query: 305 VILSACSHMGLVDEGKMYFDRMVR 328
+L C+ G + ++++
Sbjct: 507 GMLQTCAFCSDYARGSCVYGQIIK 530
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 173/395 (43%), Gaps = 14/395 (3%)
Query: 31 NPYLISQFLLSASTI--SLPFAKSFFNSLPITPPLF---------AWNTIIRALANSPTP 79
+ Y + Q L+ ++ SL S L I LF +W+ +I + +
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQH 382
Query: 80 LESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTL 139
E++ FR + R + P+ T L+ CA V++ G H +K + S+ T +
Sbjct: 383 DEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAV 442
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
+ YA CG A + F+ + ++ V ++++ Y ++A V++ M+L P+S
Sbjct: 443 ISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDS 502
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
T+V +L C+ + + G ++ I ++ D + AL M+ KC + A+++F+
Sbjct: 503 RTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDK 562
Query: 260 MP-EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDE 318
EK+ S+ IM++ HG ++ ++ F QM+ +P+ ++F I+ A + + +
Sbjct: 563 CGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV 622
Query: 319 GKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC 378
G +++ +VD+ A+ G+I+ + + V + L A
Sbjct: 623 GMSVHSSLIQC-GFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS-NKYIVSWNTMLSAY 680
Query: 379 RNQGSVPSLDDKLMSKLESELGANYVLTANVFSTC 413
G +S E+EL + V +V S C
Sbjct: 681 AAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 152/316 (48%), Gaps = 4/316 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ + + + WNT++ LA + +L+ F ++ + D+ + + A +
Sbjct: 154 ARQVFDKMHV-KDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
++ H L +K G + L+ Y +C + A VF+E+ + +W +
Sbjct: 213 KLEKSDVCRCLHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
M+AAY + E L +F MR + + N V S L A + + ++ G +IH Y +
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ V + T+L MY+KCG ++ A +F ++ ++++ S++ MI++ G + ISLF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
M + +KP+ ++ + +L C+ + GK ++ +I+ +E ++ + A+
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKC 449
Query: 350 GLIQEAYDIIKNMPME 365
G A + +P++
Sbjct: 450 GRFSPALKAFERLPIK 465
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 5/180 (2%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N L+ Y+ +R +FD + VV W+SMI Y + EAL F M + EK
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYM--SEEK 94
Query: 197 ---PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
P+ + L AC+ ++ G IH I ++ V +GTAL EMY K + A
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 254 LLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
VF+ M K++ ++ M+S L +GC + LF M + D +S ++ A S +
Sbjct: 155 RQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 193/376 (51%), Gaps = 4/376 (1%)
Query: 69 IIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTG 128
+I + E++ F+ + + P+ +TY L +C + + +G + H L +K+G
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 129 LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQ 188
S + +LL Y C + + +VF + V+W+S+I+ V + AL F+
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 189 EMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG 248
+M + KPNS TL S L CS + G IH +T+ D G+ L ++Y KCG
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
Query: 249 LMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
A LVF+++ E ++ S MI + +G ++ + LF +M ++GL+P+ ++ +L
Sbjct: 418 CSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLL 477
Query: 309 ACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNA 368
AC++ LV+EG FD R I + +HY CMVDLL RAG ++EA +++ + P+
Sbjct: 478 ACNNSRLVEEGCELFDSF-RKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDL 535
Query: 369 VILRSFLGACRNQGSVPSLDDKLMSKLESELG--ANYVLTANVFSTCASWKDASNLRLAM 426
V+ R+ L AC+ V + LE E G +L +N++++ W ++ M
Sbjct: 536 VLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKM 595
Query: 427 KQKGLKKNPGCSWLEV 442
K LKKNP SW+E+
Sbjct: 596 KDMKLKKNPAMSWVEI 611
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 166/368 (45%), Gaps = 35/368 (9%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ +A+ F+ + + WN++I L E++ +R + + + PD +T K
Sbjct: 115 IDYARQVFDGMS-ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFK 173
Query: 107 ACARVSSLSHGGVFHSLTLKTGLS-SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
A + +S H L + GL S+ + + L+ Y G A+ V D + + VV
Sbjct: 174 AFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVV 233
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+++I Y +EA+ FQ M + +PN T S+L +C + ++ G+ IH +
Sbjct: 234 LITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLM 293
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
++ + ++ T+L MY +C L+ +L VF + N S+T +IS L +G ++ +
Sbjct: 294 VKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMAL 353
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMY--------FDR-------MVRMY 330
F +M +KP+ + S L CS++ + +EG+ FDR ++ +Y
Sbjct: 354 IEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLY 413
Query: 331 NI---------------KPSVEHYGCMVDLLARAGLIQEAYDIIK---NMPMEPNAVILR 372
+ V M+ A+ G +EA D+ + N+ ++PN V +
Sbjct: 414 GKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVL 473
Query: 373 SFLGACRN 380
S L AC N
Sbjct: 474 SVLLACNN 481
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 108/218 (49%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +W ++I L + +L+ FR++ R + P++FT AL+ C+ ++ G
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H + K G D Y + L+ Y CG AR VFD ++ V++ ++MI +Y +
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EAL +F+ M +PN VT++S+L AC+ V G + ++ + ++ + +
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACM 510
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNH 278
++ + G +++A ++ + +L + ++SA H
Sbjct: 511 VDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVH 548
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 157/334 (47%), Gaps = 14/334 (4%)
Query: 100 TYPFA--LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD 157
T+ F+ L+ C S+S + LK+G ++ + + L+ CG I +ARQVFD
Sbjct: 65 THNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAE-ISGSKLVDASLKCGDIDYARQVFD 123
Query: 158 EMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSA 217
M+ R +VTW+S+IA + EA+ +++ M N P+ TL S+ A S +
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 218 GESIHSYITRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
+ H +++S V +G+AL +MY K G ++A LV + + EK++ T +I
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
G + + F M ++P+ +++ +L +C ++ + GK+ MV+ + ++
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK-SGFESAL 302
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLE 396
++ + R L+ ++ + K + PN V S + G + M+ +E
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLISGLVQNGR------EEMALIE 355
Query: 397 SELGANYVLTANVFSTCASWKDASNLRLAMKQKG 430
+ N F+ ++ + SN LAM ++G
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSN--LAMFEEG 387
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 197/378 (52%), Gaps = 2/378 (0%)
Query: 69 IIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTG 128
+I L + + L F ++R + P++ TY AL AC+ + G H+L K G
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 129 LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQ 188
+ S+ ++ L+ Y+ CG+I A +F+ V+ + ++ + S EA+ F
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 189 EMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG 248
M A + ++ + ++L ++ G+ +HS + + + + L MY+KCG
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCG 406
Query: 249 LMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
+ + VF MP++N S+ MI+A HG + L+ +M + +KP ++F +L
Sbjct: 407 DLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLH 466
Query: 309 ACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNA 368
ACSH+GL+D+G+ + M ++ I+P EHY C++D+L RAGL++EA I ++P++P+
Sbjct: 467 ACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDC 526
Query: 369 VILRSFLGACRNQG--SVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAM 426
I ++ LGAC G V + + + + + ++L AN++S+ WK+ + M
Sbjct: 527 KIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRM 586
Query: 427 KQKGLKKNPGCSWLEVQN 444
K G+ K G S +E+++
Sbjct: 587 KAMGVTKETGISSIEIEH 604
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 153/333 (45%), Gaps = 4/333 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A F+ +P+ + + N + + V +R+ SG D+ T L C
Sbjct: 109 AIKLFDEMPMRD-VISQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCD 166
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ H+L + +G + N L+ Y CG R VFD M+ R V+T ++
Sbjct: 167 TPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTA 226
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
+I+ + + + L +F MR PNSVT +S L+ACS + G+ IH+ + +
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
++ + + +AL +MY+KCG ++ A +F S E + S T+++ L +G +++ I F
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
+M G++ D S +L + GK +++ + + G ++++ ++
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNG-LINMYSKC 405
Query: 350 GLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
G + ++ + + MP + N V S + A G
Sbjct: 406 GDLTDSQTVFRRMP-KRNYVSWNSMIAAFARHG 437
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 111/225 (49%), Gaps = 2/225 (0%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N+LL YA CG + A ++FDEM +R V++ + + ++ N +E+ V + L +
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFL-RNRETESGFVLLKRMLGSGG 152
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
+ TL +LS C + IH+ + D + +G L Y KCG V
Sbjct: 153 FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
F+ M +N+ + T +IS L + +D + LF+ M + P+ +++ L+ACS +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 317 DEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
EG+ ++ Y I+ + ++D+ ++ G I++A+ I ++
Sbjct: 273 VEGQQ-IHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 190/360 (52%), Gaps = 3/360 (0%)
Query: 82 SLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLK 141
++V+F + ++ + D L C + S + G H +K+GL + N L+
Sbjct: 331 AVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLIT 390
Query: 142 FYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK-PNSV 200
Y+ + +F+++ +++W+S+I+ V S S A VF +M L P+++
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
T+ SLL+ CS++ ++ G+ +H Y RN+ + + TAL +MYAKCG +A VF S+
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Query: 261 PEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
++ MIS G Q +S + +M + GLKPD ++F +LSAC+H G VDEGK
Sbjct: 511 KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 570
Query: 321 MYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC-- 378
+ F M++ + I P+++HY MV LL RA L EA +I M ++P++ + + L AC
Sbjct: 571 ICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACII 630
Query: 379 RNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCS 438
+ V + M L+ + G YVL +N+++T A W D +R MK G G S
Sbjct: 631 HRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVS 690
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 58 PIT--PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS-- 113
PIT L +++++++ + + FR L RS L+P++FT L+A +
Sbjct: 6 PITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSF 65
Query: 114 -LSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
L V LT K+GL Y +LL Y G + A+ +FDEM R V W+++I
Sbjct: 66 KLQVEQVQTHLT-KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
Y + +A +F M P++ TLV+LL C + VS G S+H ++ +++
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
++ AL Y+KC + A ++F M +K+ S+ MI A G Q++ I++F M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 293 DMGLKPDGLSFSVILSA 309
+ ++ ++ +LSA
Sbjct: 245 EKNVEISPVTIINLLSA 261
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 106/257 (41%), Gaps = 48/257 (18%)
Query: 62 PLFAWNTIIRALANS---PTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
PL +WN++I S T E VF + + GL PD T L C+++ L+ G
Sbjct: 412 PLISWNSVISGCVQSGRASTAFE--VFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK 469
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSN 178
H TL+ ++ + L+ YA CG A VF + TW+SMI+ Y S
Sbjct: 470 ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Query: 179 SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
AL + EMR KP+ +T + +LSAC NH
Sbjct: 530 LQHRALSCYLEMREKGLKPDEITFLGVLSAC------------------NHG-------- 563
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEK-----NLQSFTIMISALGNHGCQKDVISLFTQMED 293
G + + + F +M ++ LQ + +M+ LG + + L +M+
Sbjct: 564 ---------GFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMD- 613
Query: 294 MGLKPDGLSFSVILSAC 310
+KPD + +LSAC
Sbjct: 614 --IKPDSAVWGALLSAC 628
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 12/301 (3%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+WNT+I A + S E++ F+ + + T L A +SH + H L
Sbjct: 219 SWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA-----HVSHEPL-HCLV 272
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
+K G+ +D +L+ Y+ CG + A +++ ++V +S+++ Y A+
Sbjct: 273 VKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAV 332
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
F + R K ++V LV +L C K ++ G S+H Y ++ + + L MY
Sbjct: 333 VYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMY 392
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DMGLKPDGLSF 303
+K ++ L +F + E L S+ +IS G +F QM GL PD ++
Sbjct: 393 SKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITI 452
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC--MVDLLARAGLIQEAYDIIKN 361
+ +L+ CS + ++ GK +R N + E++ C ++D+ A+ G +A + K+
Sbjct: 453 ASLLAGCSQLCCLNLGKELHGYTLR-NNFEN--ENFVCTALIDMYAKCGNEVQAESVFKS 509
Query: 362 M 362
+
Sbjct: 510 I 510
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVS--AGE 219
R + + S++ + + S + +F+++ ++ PN T+ L A + N E
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
+ +++T++ +D V + T+L +Y K G + A ++F+ MPE++ + +I +G
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+ D LF M G P + +L C G V +G+
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 171
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 203/410 (49%), Gaps = 36/410 (8%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
WN++I + +E+LV F + R+ D+ T + AC + L G H
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHAC 345
Query: 126 KTGLSSDCYTDNTLLKFYADCGA-------------------------------IGFARQ 154
K GL D +TLL Y+ CG+ I A++
Sbjct: 346 KFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKR 405
Query: 155 VFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN 214
VF+ + +++++W+SM + + E L F +M + + V+L S++SAC+ + +
Sbjct: 406 VFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Query: 215 VSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA 274
+ GE + + T +D + ++L ++Y KCG ++ VF++M + + + MIS
Sbjct: 466 LELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 275 LGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKP 334
+G + I LF +M G++P ++F V+L+AC++ GLV+EG+ F+ M + P
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 335 SVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSK 394
EH+ CMVDLLARAG ++EA ++++ MP + + + S L C G ++ K K
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG-YKAMGKKAAEK 644
Query: 395 ---LESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
LE E YV + +F+T W+ ++ +R M++ + KNPG SW +
Sbjct: 645 IIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 162/384 (42%), Gaps = 70/384 (18%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY 101
A L A+ FN++P + N+++ + E+L F+ L S D T
Sbjct: 135 AKAGELSVARRLFNAMP-EKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITL 190
Query: 102 PFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI------------ 149
LKACA + +L G H+ L G+ D +++L+ YA CG +
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 150 -----------GFA--------RQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM 190
G+A R +FD + R V+ W+SMI+ Y+ +N EAL +F EM
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 191 RLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAK--- 246
R NE + +S TL ++++AC + + G+ +H + + + + + + L +MY+K
Sbjct: 311 R--NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGS 368
Query: 247 ----------------------------CGLMKKALLVFNSMPEKNLQSFTIMISALGNH 278
CG + A VF + K+L S+ M + +
Sbjct: 369 PMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQN 428
Query: 279 GCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
GC + + F QM + L D +S S ++SAC+ + ++ G+ F R + +
Sbjct: 429 GCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT-IVGLDSDQVV 487
Query: 339 YGCMVDLLARAGLIQEAYDIIKNM 362
++DL + G ++ + M
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTM 511
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 48/287 (16%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
AK F + L +WN++ + + +E+L +F ++ + L D + + ACA
Sbjct: 403 AKRVFERIE-NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACA 461
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+SSL G + GL SD ++L+ Y CG + R+VFD M V W+S
Sbjct: 462 SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI+ Y + EA+ +F++M +A +P +T + +L+AC+
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN------------------- 562
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSM-------PEKNLQSFTIMISALGNHGCQK 282
CGL+++ +F SM P+K + F+ M+ L G +
Sbjct: 563 ----------------YCGLVEEGRKLFESMKVDHGFVPDK--EHFSCMVDLLARAGYVE 604
Query: 283 DVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
+ I+L +E+M DG +S IL C G GK ++++ +
Sbjct: 605 EAINL---VEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL 648
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 75/305 (24%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ A++ F+ +P F+WNT+I NS SL FF + P+
Sbjct: 78 MGIARNLFDEMP-DRNYFSWNTMIEGYMNSGEKGTSLRFF------DMMPER-------- 122
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
D Y+ N ++ +A G + AR++F+ M + VVT
Sbjct: 123 -------------------------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVT 157
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
+S++ Y+ + EAL +F+E+ N +++TL ++L AC+++ + G+ IH+ I
Sbjct: 158 LNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQIHAQIL 214
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG------- 279
V+ ++ ++L +YAKCG ++ A + + E + S + +IS N G
Sbjct: 215 IGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRG 274
Query: 280 --------C----------------QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
C + + + LF +M + + D + + +++AC +G
Sbjct: 275 LFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRN-ETREDSRTLAAVINACIGLGF 333
Query: 316 VDEGK 320
++ GK
Sbjct: 334 LETGK 338
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 240 LFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPD 299
L +MY++ G M A +F+ MP++N S+ MI N G + + F DM + D
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFF----DMMPERD 123
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS--VEHYGCMVDLLARAGLIQEAYD 357
G S++V++S G G++ R R++N P V ++ G +EA
Sbjct: 124 GYSWNVVVS-----GFAKAGELSVAR--RLFNAMPEKDVVTLNSLLHGYILNGYAEEALR 176
Query: 358 IIKNMPMEPNAVILRSFLGAC 378
+ K + +A+ L + L AC
Sbjct: 177 LFKELNFSADAITLTTVLKAC 197
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 162/280 (57%), Gaps = 2/280 (0%)
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
VV+W+S+I+ V + +A F++M PNS T+++LL AC+ + + G+ IH
Sbjct: 253 VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHG 312
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
Y ++ + +AL +MY KCG + +A+++F P+K +F MI NHG
Sbjct: 313 YSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADK 372
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMV 343
+ LF QME G K D L+F+ IL+ACSH GL D G+ F M Y I P +EHY CMV
Sbjct: 373 AVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMV 432
Query: 344 DLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS--VPSLDDKLMSKLESELGA 401
DLL RAG + EAY++IK M MEP+ + + L ACRN G+ + + K +++LE E
Sbjct: 433 DLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSG 492
Query: 402 NYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
N +L ++++ SW+ ++ +K+K ++ G SW+E
Sbjct: 493 NGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 150/337 (44%), Gaps = 42/337 (12%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P + +I A A + ESL FFR + + GL D F P LKA
Sbjct: 70 ARKVFDEMP-KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASR 128
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ G + H L LK SD + ++L+ Y+ G +G AR+VF ++ + +V +++
Sbjct: 129 NLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNA 188
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI+ Y ++ EAL++ ++M+L KP+ +T +L+S S M RN
Sbjct: 189 MISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM--------------RNE 234
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+S L + Y + ++ S+T +IS L ++ + F
Sbjct: 235 EKVSEILELMCLDGY-----------------KPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG----CMVDL 345
QM GL P+ + +L AC+ + + GK + Y++ +E +G ++D+
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTLAYMKHGK-----EIHGYSVVTGLEDHGFVRSALLDM 332
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
+ G I EA + + P + V S + N G
Sbjct: 333 YGKCGFISEAMILFRKTP-KKTTVTFNSMIFCYANHG 368
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 138/282 (48%), Gaps = 4/282 (1%)
Query: 100 TYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
+Y ++A R G V H+ + +G++ L+ FY +CG + AR+VFDEM
Sbjct: 18 SYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM 77
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
R + MI A + E+L F+EM K ++ + SLL A +++ G+
Sbjct: 78 PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGK 137
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
IH + + + + ++L +MY+K G + A VF+ + E++L F MIS N+
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
+ ++L M+ +G+KPD ++++ ++S SHM ++ + M + KP V +
Sbjct: 198 QADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC-LDGYKPDVVSW 256
Query: 340 GCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSFLGAC 378
++ L ++A+D K M + PN+ + + L AC
Sbjct: 257 TSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 33/254 (12%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +W +II L ++ ++ F+++ GL P++ T L AC ++ + HG
Sbjct: 251 PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEI 310
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H ++ TGL + + LL Y CG I A +F + +T VT++SMI Y
Sbjct: 311 HGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLA 370
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+A+ +F +M EK + +T ++L+ACS H+ +T +LG L
Sbjct: 371 DKAVELFDQMEATGEKLDHLTFTAILTACS-----------HAGLT--------DLGQNL 411
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
F LM+ + +P L+ + M+ LG G ++ + ++ M ++PD
Sbjct: 412 FL------LMQNK---YRIVPR--LEHYACMVDLLGRAG---KLVEAYEMIKAMRMEPDL 457
Query: 301 LSFSVILSACSHMG 314
+ +L+AC + G
Sbjct: 458 FVWGALLAACRNHG 471
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 206/396 (52%), Gaps = 8/396 (2%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+S+ L +WN +I + S F+ + G PD FT+ L+A
Sbjct: 167 ARLQFDSMK-ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASI 225
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
V L H L +K G +L+ Y CG++ A ++ + R +++ ++
Sbjct: 226 VVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTA 285
Query: 170 MIAAYVGSNS-PSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY-ITR 227
+I + N+ S+A +F++M K + V + S+L C+ + +V+ G IH + +
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ + V LG +L +MYAK G ++ A+L F M EK+++S+T +I+ G HG + I L
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+ +ME +KP+ ++F +LSACSH G + G +D M+ + I+ EH C++D+LA
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLA 465
Query: 348 RAGLIQEAYDIIKNMP--MEPNAVILRSFLGACRNQGSVP--SLDDKLMSKLESELGANY 403
R+G ++EAY +I++ + ++ +FL ACR G+V + + +E NY
Sbjct: 466 RSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNY 525
Query: 404 VLTANVFSTCASWKDASNLRLAMKQKG-LKKNPGCS 438
+ A+V++ +W +A N R MK+ G K PG S
Sbjct: 526 INLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 5/370 (1%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ A+ F+ + + +W +I + ++L+ F+ + R + + FTY LK
Sbjct: 63 VKHARKLFDRIS-KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLK 121
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
+C + L G H K + + + LL YA CG + AR FD M R +V+
Sbjct: 122 SCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVS 181
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W++MI Y + + +FQ M +KP+ T SLL A + + +H
Sbjct: 182 WNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAI 241
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNH-GCQKDVI 285
+ S L +L Y KCG + A + +++L S T +I+ C D
Sbjct: 242 KLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAF 301
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
+F M M K D + S +L C+ + V G+ ++ I+ V ++D+
Sbjct: 302 DIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDM 361
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE-LGANYV 404
A++G I++A + M E + S + G+ D L +++E E + N V
Sbjct: 362 YAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFEKAID-LYNRMEHERIKPNDV 419
Query: 405 LTANVFSTCA 414
++ S C+
Sbjct: 420 TFLSLLSACS 429
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 2/216 (0%)
Query: 94 LSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFAR 153
LSP Y ALK C+ + + H ++ G S+ + L+ Y G + AR
Sbjct: 10 LSPS--LYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHAR 67
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
++FD ++ R VV+W++MI+ + +AL +F+EM + K N T S+L +C +
Sbjct: 68 KLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLG 127
Query: 214 NVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMIS 273
+ G IH + + + ++ + +AL +YA+CG M++A L F+SM E++L S+ MI
Sbjct: 128 CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMID 187
Query: 274 ALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+ C SLF M G KPD +F +L A
Sbjct: 188 GYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
IH N +++L L ++Y K G +K A +F+ + ++++ S+T MIS G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG 340
D + LF +M +K + ++ +L +C +G + EG I SVE
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG----------MQIHGSVEKGN 143
Query: 341 CMVDLLARAGLI 352
C +L+ R+ L+
Sbjct: 144 CAGNLIVRSALL 155
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 182/309 (58%), Gaps = 9/309 (2%)
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPN 198
++ Y G + AR +F + R +V W+++IA Y + +A+ F M+ +P+
Sbjct: 214 MMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPD 273
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
+VT+ S+LSAC++ + G +HS I ++++ + AL +MYAKCG ++ A VF
Sbjct: 274 AVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFE 333
Query: 259 SMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDE 318
S+ +++ MIS L HG K+ + +F+ ME + LKPD ++F +L+AC H G + E
Sbjct: 334 SISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLME 393
Query: 319 GKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC 378
G F M + ++KP+V+H+GC++ LL R+G ++EAY ++K M ++PN +L + LGAC
Sbjct: 394 GLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGAC 452
Query: 379 RNQGSVPSLDDKLMSKLES------ELGANYVLT-ANVFSTCASWKDASNLRLAMKQKGL 431
+ + +++M +E+ N++ + +N+++ W+ A LR+ M+++GL
Sbjct: 453 KVHMDT-EMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGL 511
Query: 432 KKNPGCSWL 440
+K+PG S L
Sbjct: 512 EKSPGLSSL 520
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 45/340 (13%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA-RVSSLSHGGVFHS 122
F + +I+ + +P+++LV + ++R G+ + P L+ACA V + G + HS
Sbjct: 12 FHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHS 70
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
++K G+ SD ++L+ Y CG + AR+VFDEM R V TW++MI Y+ +
Sbjct: 71 ESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVL 130
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS---YITRNHVDMSVELGTA 239
A +F+E+ + N+VT + ++ K + + + + +N SV LG
Sbjct: 131 ASGLFEEISVCR---NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLG-- 185
Query: 240 LFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM---------------------------- 271
+Y M+ A F +PEKN +++M
Sbjct: 186 ---VYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIW 242
Query: 272 ---ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
I+ +G D I F M+ G +PD ++ S ILSAC+ G +D G+ ++
Sbjct: 243 NTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGR-EVHSLIN 301
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNA 368
I+ + ++D+ A+ G ++ A + +++ + A
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 43/256 (16%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L WNT+I A + +++ F +Q G PD T L ACA+ L G HS
Sbjct: 239 LVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHS 298
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L G+ + + N L+ YA CG + A VF+ ++VR+V +SMI+ E
Sbjct: 299 LINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKE 358
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
AL +F M + KP+ +T +++L+AC +H
Sbjct: 359 ALEMFSTMESLDLKPDEITFIAVLTAC-----------VHG------------------- 388
Query: 243 MYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP 298
G + + L +F+ M + N++ F +I LG G K+ L +M +KP
Sbjct: 389 -----GFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH---VKP 440
Query: 299 DGLSFSVILSACS-HM 313
+ +L AC HM
Sbjct: 441 NDTVLGALLGACKVHM 456
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 203/388 (52%), Gaps = 7/388 (1%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG-LSPDNFTYPFALKACARVSSLSHGG 118
T L +WN++I A+S LESL F+ + R G + D T + A + + G
Sbjct: 542 TRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR 601
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSN 178
FH L +K+ D NTL+ Y C I A +VF ++ + +W+ +I+A +
Sbjct: 602 CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNK 661
Query: 179 SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
+ E +F+ ++L +PN +T V LLSA +++ + S G H ++ R + +
Sbjct: 662 AGREVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSA 718
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME-DMGLK 297
AL +MY+ CG+++ + VF + ++ ++ +ISA G HG + + LF ++ + ++
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 298 PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYD 357
P+ SF +LSACSH G +DEG Y+ +M + +KP EH +VD+L RAG ++EAY+
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYE 838
Query: 358 IIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGANYVLTANVFSTCAS 415
I + A + + L AC G + +++ ++E + + Y+ AN +
Sbjct: 839 FITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGG 898
Query: 416 WKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
W++A LR ++ LKK PG S ++V+
Sbjct: 899 WEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Query: 63 LFAWNTII-RALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFH 121
+ +WNTI+ + LAN P +SL +F+ + SG D T+ + AC+ + L+ G H
Sbjct: 254 IVSWNTIMTKCLANGH-PRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLH 312
Query: 122 SLTLKTGLSSDCYTD--NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNS 179
L +K+G S + + N+++ Y+ CG A VF+E+ R V++ ++++ + +
Sbjct: 313 GLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGM 372
Query: 180 PSEALHVFQEMRLANE-KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVD-MSVELG 237
EA + +M+ ++ +P+ T+VS+ S C + G ++H Y R + ++E+
Sbjct: 373 FEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVI 432
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM 291
++ +MY KCGL +A L+F + ++L S+ MISA +G +LF ++
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 145/301 (48%), Gaps = 3/301 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ WN++I AL + + ++ F + G D+ T A A + + + H
Sbjct: 153 VIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHC 212
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L ++TGL D N L+ YA + A VF M R +V+W++++ + + P +
Sbjct: 213 LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV--DMSVELGTAL 240
+L F+ M + ++ ++VT ++SACS + ++ GES+H + ++ + V +G ++
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG-LKPD 299
MY+KCG + A VF + +++ S +++ +G ++ + QM+ + ++PD
Sbjct: 333 ISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPD 392
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII 359
+ I S C + EG+ VRM ++E ++D+ + GL +A +
Sbjct: 393 IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF 452
Query: 360 K 360
K
Sbjct: 453 K 453
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 159/371 (42%), Gaps = 56/371 (15%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR-SGLSPDNFTYPFALKAC 108
A++ F L + + + N I+ A + E+ ++Q + PD T C
Sbjct: 345 AETVFEEL-VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCY-TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
+S G H T++ + S N+++ Y CG A +F R +V+W
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSW 463
Query: 168 SSMIAAYVGSNSPSEALHVFQEM--RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+SMI+A+ + +A ++F+E+ + K + T++++L++C ++ G+S+H ++
Sbjct: 464 NSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPE-KNLQSFTIMISALGNHGCQKDV 284
K G + A L +M E ++L S+ +IS + G +
Sbjct: 524 -------------------QKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLES 564
Query: 285 ISLFTQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYF---------------DRMVR 328
+ F M G ++ D ++ +SA ++GLV +G+ + + ++
Sbjct: 565 LRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLIT 624
Query: 329 MY----NIKPSVEHYG-----------CMVDLLARAGLIQEAYDIIKNMPMEPNAVILRS 373
MY +I+ +V+ +G C++ L++ +E + + +N+ +EPN +
Sbjct: 625 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVG 684
Query: 374 FLGACRNQGSV 384
L A GS
Sbjct: 685 LLSASTQLGST 695
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 2/192 (1%)
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H LK GL D T + LL FY G + + +FDE+ + V+ W+SMI A +
Sbjct: 110 HCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRY 169
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
A+ +F EM + +S TL+ SA S + +H + L AL
Sbjct: 170 IAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNAL 229
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSF-TIMISALGNHGCQKDVISLFTQMEDMGLKPD 299
+YAK + A VF M +++ S+ TIM L N G + + F M G + D
Sbjct: 230 MNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLAN-GHPRKSLQYFKSMTGSGQEAD 288
Query: 300 GLSFSVILSACS 311
++FS ++SACS
Sbjct: 289 TVTFSCVISACS 300
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 208/388 (53%), Gaps = 10/388 (2%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +WN+I+ ++ E+L F + + + D T L+ C H
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+ ++ G S+ ++L+ Y C + A V D M + VV+ S+MI+ + E
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS-VELGTALF 241
A+ +F MR + PN++T++SLL+ACS ++ + H R + ++ + +GT++
Sbjct: 413 AISIFCHMR---DTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+ YAKCG ++ A F+ + EKN+ S+T++ISA +G ++LF +M+ G P+ +
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAV 529
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
++ LSAC+H GLV +G M F MV + KPS++HY C+VD+L+RAG I A ++IKN
Sbjct: 530 TYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKN 588
Query: 362 MP--MEPNAVILRSFLGACRNQGSVPSLDDKLMS---KLESELGANYVLTANVFSTCASW 416
+P ++ A + L CRN+ + ++++ +LE + Y+L ++ F+ SW
Sbjct: 589 LPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSW 648
Query: 417 KDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+D + +R +K++ ++ G S + N
Sbjct: 649 EDVAMMRRLVKERKVRVVAGYSMVREGN 676
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 159/371 (42%), Gaps = 40/371 (10%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL-QRSGLSPDNFTYPFALKAC 108
A+ F+ + + +W+ +IR+ S P+ L F+ + + PD T LKAC
Sbjct: 178 ARKLFDEMS-ERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 109 ARVSSLSHGGVFHSLTLKTGLS-SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
+ + G H +++ G +D + N+L+ Y+ + A +VFDE R +V+W
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR 227
+S++A +V + EAL +F M + + VT+VSLL C +SIH I R
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 228 NHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL 287
+ + ++L + Y C L+ A V +SM K++ S + MIS L + G + IS+
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
F M D P+ ++ +L+ACS + K +R + +VD A
Sbjct: 417 FCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473
Query: 348 RAGLIQEA----------------------------------YDIIKNMPMEPNAVILRS 373
+ G I+ A +D +K PNAV +
Sbjct: 474 KCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLA 533
Query: 374 FLGACRNQGSV 384
L AC + G V
Sbjct: 534 ALSACNHGGLV 544
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLS-PDNFTYPFALKACARVSSLSHG 117
+ L A ++ I+ + S E + + +QR+G+ D F +P KACA++S L G
Sbjct: 5 LCSKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG 64
Query: 118 GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGS 177
N++ FY CG + + FD M R V+W+ ++ +
Sbjct: 65 -------------------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDY 105
Query: 178 NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
E L F ++R+ +PN+ TLV ++ AC + GE IH Y+ R+ +
Sbjct: 106 GFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQ 163
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGL 296
++ MYA + A +F+ M E+++ S++++I + + LF +M +
Sbjct: 164 NSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 297 KPDGLSFSVILSACSHMGLVDEGK 320
+PD ++ + +L AC+ M +D G+
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGR 246
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 212/399 (53%), Gaps = 14/399 (3%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ F+ +P + +WN II + A + F + SP ++
Sbjct: 186 LDEARRVFDKIPEKDAV-SWNLIISSYAKKGDMGNACSLFSAMPLK--SPASWNILIGGY 242
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
R L+ F ++ K G+S T++ Y G + A ++F M+ + +
Sbjct: 243 VNCREMKLART-YFDAMPQKNGVSWI-----TMISGYTKLGDVQSAEELFRLMSKKDKLV 296
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANE--KPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+ +MIA Y + P +AL +F +M N +P+ +TL S++SA S++ N S G + SY
Sbjct: 297 YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESY 356
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
IT + + + L T+L ++Y K G KA +F+++ +K+ S++ MI G +G +
Sbjct: 357 ITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEA 416
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
SLFT M + + P+ ++F+ +LSA SH GLV EG F+ M + +N++PS +HYG MVD
Sbjct: 417 NSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVD 475
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC--RNQGSVPSLDDKLMSKLESELGAN 402
+L RAG ++EAY++IK+MPM+PNA + + L A N + KLE++
Sbjct: 476 MLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGY 535
Query: 403 YVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
A ++S+ W DA +R ++K+K L K GCSW+E
Sbjct: 536 LSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 169/382 (44%), Gaps = 45/382 (11%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSL 123
F+W ++R L+ E++ + + SG+ P + L+AC ++ ++ G H+
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQ 129
Query: 124 TLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEA 183
LK GL Y L+ Y+ G I A++ FD++A + V+W+S++ Y+ S EA
Sbjct: 130 ALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEA 189
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT-RNHVDMSVELGTALFE 242
VF ++ + ++V+ ++S+ +K ++ S+ S + ++ ++ +G
Sbjct: 190 RRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG---- 241
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISA---LGN---------------------- 277
Y C MK A F++MP+KN S+ MIS LG+
Sbjct: 242 -YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 278 ------HGCQKDVISLFTQMEDMG--LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
+G KD + LF QM + ++PD ++ S ++SA S +G G + + +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFG-TWVESYITE 359
Query: 330 YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD 389
+ IK ++DL + G +A+ + N+ + + V + + C G +
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANS 418
Query: 390 KLMSKLESELGANYVLTANVFS 411
+ +E ++ N V + S
Sbjct: 419 LFTAMIEKKIPPNVVTFTGLLS 440
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 217/433 (50%), Gaps = 37/433 (8%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSP----- 96
A + + A F+ +P + +WN++++AL E++ F R+ R +
Sbjct: 151 AQSGRIDKALELFDEMP-ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMV 209
Query: 97 DNFTYPFALKACARV-SSLSHGGVFHSLTLKTGLSSDCYTD-----------------NT 138
D + R+ + + + TG + + D NT
Sbjct: 210 DGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNT 269
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM-RLANEKP 197
++ + + A +FD M + V++W++MI YV + EAL+VF +M R + KP
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP 329
Query: 198 NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVF 257
N T VS+LSACS + + G+ IH I+++ + + +AL MY+K G + A +F
Sbjct: 330 NVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF 389
Query: 258 NS--MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
++ + +++L S+ MI+ +HG K+ I ++ QM G KP +++ +L ACSH GL
Sbjct: 390 DNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGL 449
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL 375
V++G +F +VR ++ EHY C+VDL RAG +++ + I +A + RSF
Sbjct: 450 VEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINC----DDARLSRSFY 505
Query: 376 G----ACRNQGSVPSLDDKLMSKLE--SELGANYVLTANVFSTCASWKDASNLRLAMKQK 429
G AC V + + LE S+ YVL +N+++ ++A+ +R+ MK+K
Sbjct: 506 GAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
Query: 430 GLKKNPGCSWLEV 442
GLKK PGCSW++V
Sbjct: 566 GLKKQPGCSWVKV 578
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 147 GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
G I AR++FD + R VVTW+ +I Y+ EA +F + + + N VT +++
Sbjct: 60 GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMV 116
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
S + +S E + + +V V T + + YA+ G + KAL +F+ MPE+N+
Sbjct: 117 SGYLRSKQLSIAEMLFQEMPERNV---VSWNT-MIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 267 SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
S+ M+ AL G + ++LF +M + D +S++ ++ + G VDE + FD M
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKNGKVDEARRLFDCM 228
Query: 327 VRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQ 381
+ ++ + M+ A+ I EA + + MP A G RN+
Sbjct: 229 P-----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNR 278
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN-- 194
NT++ YA G I A ++FDEM R +V+W+SM+ A V EA+++F+ M +
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 195 ---------EKPNSVTLVSLLSACSKMVN-VSAGESIHSYITRNHVDMSVELGTALFEM- 243
K V L C N +S I Y N +D + +L + E
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 244 ----------YAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-E 292
+ + M KA +F+ MPEKN+ S+T MI+ + ++ +++F++M
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGK 320
D +KP+ ++ ILSACS + + EG+
Sbjct: 324 DGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 104/240 (43%), Gaps = 21/240 (8%)
Query: 143 YADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTL 202
Y + A +F EM R VV+W++MI Y S +AL +F EM + N V+
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSW 174
Query: 203 VSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPE 262
S++ A + + ++ + R V TA+ + AK G + +A +F+ MPE
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPE 230
Query: 263 KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMY 322
+N+ S+ MI+ + + LF M + D S++ +++ +++
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGL 286
Query: 323 FDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM----PMEPNAVILRSFLGAC 378
FDRM + +V + M+ +EA ++ M ++PN S L AC
Sbjct: 287 FDRMP-----EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 196/381 (51%), Gaps = 6/381 (1%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ + WNTI + + +L ++ + + LKAC+ + +L G
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 119 VFHSLTLKT-GLSSDC-YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVG 176
VFH L +++ S D N+L+ Y+ C + A VF ++ ++ TW+S+I+ +
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVE 235
+ E + +EM L+ PN +TL S+L +++ N+ G+ H YI R +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG 295
L +L +MYAK G + A VF+SM +++ ++T +I G G + ++ F M+ G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
+KPD ++ +LSACSH LV EG F +M ++ I+ +EHY CMVDL RAG + +A
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 356 YDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD---DKLMSKLESELGANYVLTANVFST 412
DI +P EP++ + + L AC G+ + DKL+ + + E +Y+L A++++
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 413 CASWKDASNLRLAMKQKGLKK 433
SW ++ + G++K
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQK 661
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 44/356 (12%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A++ + I PL WN +I + + ES+ ++R+ G+ D FTYP +K
Sbjct: 134 LDEAQTITENSEILHPL-PWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
ACA + ++G V H + + Y N L+ Y G + AR++FD M+ R V+
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLA--------------------------------- 193
W+++I Y EA + M L+
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR 312
Query: 194 --NEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR-----NHVDMSVELGTALFEMYAK 246
N + SV +++ L ACS + + G+ H + R + +D + +L MY++
Sbjct: 313 NCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID---NVRNSLITMYSR 369
Query: 247 CGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVI 306
C ++ A +VF + +L ++ +IS + ++ L +M G P+ ++ + I
Sbjct: 370 CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASI 429
Query: 307 LSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
L + +G + GK + ++R + K + + +VD+ A++G I A + +M
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 94/210 (44%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L C + G H+ + +GL D L+ FY+ + A+ + + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+ W+ +I +Y+ + E++ V++ M + + T S++ AC+ +++ + G +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
I + ++ + AL MY + G + A +F+ M E++ S+ +I+ + +
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
L +M G++ ++++ I C G
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 196/381 (51%), Gaps = 6/381 (1%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ + WNTI + + +L ++ + + LKAC+ + +L G
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 119 VFHSLTLKT-GLSSDC-YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVG 176
VFH L +++ S D N+L+ Y+ C + A VF ++ ++ TW+S+I+ +
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVE 235
+ E + +EM L+ PN +TL S+L +++ N+ G+ H YI R +
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG 295
L +L +MYAK G + A VF+SM +++ ++T +I G G + ++ F M+ G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
+KPD ++ +LSACSH LV EG F +M ++ I+ +EHY CMVDL RAG + +A
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 356 YDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD---DKLMSKLESELGANYVLTANVFST 412
DI +P EP++ + + L AC G+ + DKL+ + + E +Y+L A++++
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 413 CASWKDASNLRLAMKQKGLKK 433
SW ++ + G++K
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQK 661
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 155/356 (43%), Gaps = 44/356 (12%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A++ + I PL WN +I + + ES+ ++R+ G+ D FTYP +K
Sbjct: 134 LDEAQTITENSEILHPL-PWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIK 192
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
ACA + ++G V H + + Y N L+ Y G + AR++FD M+ R V+
Sbjct: 193 ACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVS 252
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLA--------------------------------- 193
W+++I Y EA + M L+
Sbjct: 253 WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMR 312
Query: 194 --NEKPNSVTLVSLLSACSKMVNVSAGESIHSYITR-----NHVDMSVELGTALFEMYAK 246
N + SV +++ L ACS + + G+ H + R + +D + +L MY++
Sbjct: 313 NCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDID---NVRNSLITMYSR 369
Query: 247 CGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVI 306
C ++ A +VF + +L ++ +IS + ++ L +M G P+ ++ + I
Sbjct: 370 CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASI 429
Query: 307 LSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
L + +G + GK + ++R + K + + +VD+ A++G I A + +M
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 94/210 (44%)
Query: 105 LKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
L C + G H+ + +GL D L+ FY+ + A+ + + +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+ W+ +I +Y+ + E++ V++ M + + T S++ AC+ +++ + G +H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
I + ++ + AL MY + G + A +F+ M E++ S+ +I+ + +
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
L +M G++ ++++ I C G
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 173/317 (54%), Gaps = 8/317 (2%)
Query: 134 YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLA 193
+TD ++K ++ G I ++F M + +TW++MI+A+V + EAL F +M
Sbjct: 375 WTD--MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 194 NEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
PNS T S+LSA + + ++ G IH + + ++ + + +L MY KCG A
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Query: 254 LLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
+F+ + E N+ S+ MIS +G K + LF+ +E G +P+G++F +LSAC H+
Sbjct: 493 YKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHV 552
Query: 314 GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRS 373
G VD G YF M YNI+P +HY CMVDLL R+GL+ +A ++I MP +P++ + S
Sbjct: 553 GYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGS 612
Query: 374 FLGACRNQGSV--PSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGL 431
L A + V L K + +LE + YV+ + ++S +D + K K +
Sbjct: 613 LLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRI 672
Query: 432 KKNPGCSWL----EVQN 444
KK+PG SW+ EV N
Sbjct: 673 KKDPGSSWIILKGEVHN 689
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 149/350 (42%), Gaps = 46/350 (13%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG-LSPDNFTYPFALKAC 108
A+S F+ + + W +I + + F R+++ G + ++ T KAC
Sbjct: 227 ARSLFDRMT-ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Query: 109 ARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
G H L + L D + N+L+ Y+ G +G A+ VF M + V+W+
Sbjct: 286 RDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWN 345
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
S+I V SEA +F++M G+ + S+
Sbjct: 346 SLITGLVQRKQISEAYELFEKM--------------------------PGKDMVSW---- 375
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
T + + ++ G + K + +F MPEK+ ++T MISA ++G ++ + F
Sbjct: 376 ---------TDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWF 426
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+M + P+ +FS +LSA + + + EG R+V+M NI + +V + +
Sbjct: 427 HKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM-NIVNDLSVQNSLVSMYCK 485
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFL-GACRNQGSVPSLDDKLMSKLES 397
G +AY I + EPN V + + G N +L KL S LES
Sbjct: 486 CGNTNDAYKIFSCIS-EPNIVSYNTMISGYSYNGFGKKAL--KLFSMLES 532
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
W +I A ++ E+L +F ++ + + P+++T+ L A A ++ L G H +
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
K + +D N+L+ Y CG A ++F ++ +V++++MI+ Y + +AL
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG----TALF 241
+F + + ++PN VT ++LLSAC + V G Y ++E G +
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLG---WKYFKSMKSSYNIEPGPDHYACMV 582
Query: 242 EMYAKCGLMKKALLVFNSMPEK 263
++ + GL+ A + ++MP K
Sbjct: 583 DLLGRSGLLDDASNLISTMPCK 604
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 113/260 (43%), Gaps = 22/260 (8%)
Query: 127 TGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHV 186
T S+ + N+ + +A G + A +F +M+ R++V+W +MI+AY + S+A V
Sbjct: 44 TTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQV 103
Query: 187 FQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAK 246
F EM + + + +++ +K A E +N V + + + +
Sbjct: 104 FDEMPVRVTTSYNAMITAMIK--NKCDLGKAYELFCDIPEKNAVSYAT-----MITGFVR 156
Query: 247 CGLMKKALLVFNSMPEKNLQSF--TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
G +A ++ P K S +++S G + + +F + M +K + +S S
Sbjct: 157 AGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVF---QGMAVK-EVVSCS 212
Query: 305 VILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM 364
++ MG + + + FDRM + +V + M+D +AG ++ + + M
Sbjct: 213 SMVHGYCKMGRIVDARSLFDRMT-----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ 267
Query: 365 EP----NAVILRSFLGACRN 380
E N+ L ACR+
Sbjct: 268 EGDVKVNSNTLAVMFKACRD 287
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 196/399 (49%), Gaps = 27/399 (6%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGV--- 119
L WN++I A +++ F R+ G+ D T + + S L V
Sbjct: 226 LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKC 285
Query: 120 ---FHSLTLKTGLSSDCYTDNTLLKFYA-------DCGAIGFARQVFDEMA-VRTVVTWS 168
HSLT+K+GL + L+K Y+ DC ++F EM+ R +V W+
Sbjct: 286 CLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC------YKLFMEMSHCRDIVAWN 339
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+I A+ + P A+H+F ++R P+ T S+L AC+ +V SIH+ + +
Sbjct: 340 GIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG 398
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
L +L YAKCG + + VF+ M +++ S+ M+ A HG ++ +F
Sbjct: 399 GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVF 458
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+M+ + PD +F +LSACSH G V+EG F M P + HY C++D+L+R
Sbjct: 459 QKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSR 515
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV---PSLDDKLMSKLESELGANYVL 405
A EA ++IK MPM+P+AV+ + LG+CR G+ DKL +E +Y+
Sbjct: 516 AERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQ 575
Query: 406 TANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+N+++ S+ +A+ M+ ++K P SW E+ N
Sbjct: 576 MSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGN 614
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 101 YPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL-----KFYADCGAIGFARQV 155
Y +ACA +L G H L CY+ N +L YA CG I +ARQV
Sbjct: 62 YAALFQACAEQRNLLDGINLHHHMLSHPY---CYSQNVILANFLINMYAKCGNILYARQV 118
Query: 156 FDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNV 215
FD M R VV+W+++I YV + + E +F M L++ PN TL S+L++C
Sbjct: 119 FDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSC----RY 173
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEMYAKC---GLMKKALLVFNSMPEKNLQSFTIMI 272
G+ +H + + S+ + A+ MY +C +A VF ++ KNL ++ MI
Sbjct: 174 EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMI 233
Query: 273 SALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACS 311
+A K I +F +M G+ G + +L+ CS
Sbjct: 234 AAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNICS 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 171/405 (42%), Gaps = 60/405 (14%)
Query: 31 NPYLISQ------FLLS--ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLES 82
+PY SQ FL++ A ++ +A+ F+++P + +W +I + E
Sbjct: 88 HPYCYSQNVILANFLINMYAKCGNILYARQVFDTMP-ERNVVSWTALITGYVQAGNEQEG 146
Query: 83 LVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKF 142
F + S P+ FT L +C G H L LK GL Y N ++
Sbjct: 147 FCLFSSML-SHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISM 201
Query: 143 YADC--GAIGF-ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
Y C GA + A VF+ + + +VTW+SMIAA+ N +A+ VF M +
Sbjct: 202 YGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR 261
Query: 200 VTLVSLLSACSKMVNVSAGE------SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
TL+++ S+ K ++ E +HS ++ + E+ TAL ++Y++ +++
Sbjct: 262 ATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSE--MLEDY 319
Query: 254 LLVFNSMPE----KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+ E +++ ++ +I+A + ++ I LF Q+ L PD +FS +L A
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITAFAVYDPER-AIHLFGQLRQEKLSPDWYTFSSVLKA 378
Query: 310 CS-----------HMGLVDEGKMY-----------------FDRMVRMYNIKPS--VEHY 339
C+ H ++ G + D +R+++ S V +
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438
Query: 340 GCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
M+ + G + + + M + P++ + L AC + G V
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRV 483
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 177/349 (50%), Gaps = 39/349 (11%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ WN ++ AN P+ +F + LQ G P +T+ ALK+C V+ L HS
Sbjct: 382 IVCWNALLSGYANKDGPICLSLFLQMLQM-GFRPTEYTFSTALKSCC-VTELQQ---LHS 436
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT------------------- 163
+ ++ G + Y ++L++ YA + A + D + T
Sbjct: 437 VIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYH 496
Query: 164 -------------VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACS 210
V+W+ IAA S+ E + +F+ M +N +P+ T VS+LS CS
Sbjct: 497 ESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS 556
Query: 211 KMVNVSAGESIHSYITRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFT 269
K+ +++ G SIH IT+ + + L +MY KCG ++ + VF EKNL ++T
Sbjct: 557 KLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWT 616
Query: 270 IMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
+IS LG HG ++ + F + +G KPD +SF IL+AC H G+V EG F +M +
Sbjct: 617 ALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KD 675
Query: 330 YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC 378
Y ++P ++HY C VDLLAR G ++EA +I+ MP +A + R+FL C
Sbjct: 676 YGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ F +P L WN ++ L + E + FFR L R G S ++ LK
Sbjct: 165 LEMAEQVFEDMPF-KSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
+ V L H K GL + N+L+ Y CG A ++F + +V+
Sbjct: 224 GVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+++I A S +P +AL +F M PN T VS+L S + +S G IH +
Sbjct: 284 WNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD--- 283
+N + + LG AL + YAKCG ++ + L F+ + +KN+ + ++S N KD
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN----KDGPI 399
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
+SLF QM MG +P +FS L +C V E + +VRM
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRM 441
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 160/388 (41%), Gaps = 71/388 (18%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +WN II A A S PL++L F + G SP+ TY L + V LS G H
Sbjct: 281 IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHG 340
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
+ +K G + N L+ FYA CG + +R FD + + +V W+++++ Y + P
Sbjct: 341 MLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI- 399
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
L +F +M +P T + L +C V+ + +HS I R + + + ++L
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSLMR 455
Query: 243 MYAKCGLMKKALLVFN--------------------------------SMPEKNLQSFTI 270
YAK LM ALL+ + ++ + + S+ I
Sbjct: 456 SYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNI 515
Query: 271 MISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM----------GLVDE-- 318
I+A ++VI LF M ++PD +F ILS CS + GL+ +
Sbjct: 516 AIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTD 575
Query: 319 ----GKMYFDRMVRMYNIKPSVEH---------------YGCMVDLLARAGLIQEAYDII 359
+ ++ MY S+ + ++ L G QEA +
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 360 K---NMPMEPNAVILRSFLGACRNQGSV 384
K ++ +P+ V S L ACR+ G V
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMV 663
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +WN I A + S E + F+ + +S + PD +T+ L C+++ L+ G
Sbjct: 508 PDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI 567
Query: 121 HSLTLKTGLS-SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNS 179
H L KT S +D + N L+ Y CG+I +VF+E + ++TW+++I+
Sbjct: 568 HGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGY 627
Query: 180 PSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTA 239
EAL F+E KP+ V+ +S+L+AC V G + + V+ ++
Sbjct: 628 GQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRC 687
Query: 240 LFEMYAKCGLMKKALLVFNSMP 261
++ A+ G +K+A + MP
Sbjct: 688 AVDLLARNGYLKEAEHLIREMP 709
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 5/219 (2%)
Query: 105 LKACARVSSLSHGGVFH--SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR 162
L C + S + H S+TL + L Y N ++ Y G + A +VFD+M R
Sbjct: 19 LNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPER 78
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
V+++++I Y +A VF EMR PN T+ LLS S ++V AG +H
Sbjct: 79 NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCAS--LDVRAGTQLH 136
Query: 223 SYITRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
+ + M+ +GT L +Y + L++ A VF MP K+L+++ M+S LG+ G
Sbjct: 137 GLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFL 196
Query: 282 KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
K+ + F ++ MG SF +L S + +D K
Sbjct: 197 KECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISK 235
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 138/319 (43%), Gaps = 8/319 (2%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
+ A F+ +P + ++NTII+ + ++ F ++ G P+ T L
Sbjct: 65 VSLAGKVFDQMPERNKV-SFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVS-GLL 122
Query: 107 ACARVSSLSHGGVFHSLTLKTGL-SSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
+CA + + G H L+LK GL +D + LL Y + A QVF++M +++
Sbjct: 123 SCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLE 181
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
TW+ M++ E + F+E+ + + +L S + ++ + +H
Sbjct: 182 TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSA 241
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
T+ +D + + +L Y KCG A +F ++ S+ +I A +
Sbjct: 242 TKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKAL 301
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
LF M + G P+ ++ +L S + L+ G+ +++ + + ++D
Sbjct: 302 KLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK-NGCETGIVLGNALIDF 360
Query: 346 LARAGLIQEA---YDIIKN 361
A+ G ++++ +D I++
Sbjct: 361 YAKCGNLEDSRLCFDYIRD 379
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 198/415 (47%), Gaps = 40/415 (9%)
Query: 31 NPYLISQFL-LSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRL 89
N Y+ S + + A + A++ + + + +WN++I E+L F R+
Sbjct: 261 NIYVQSALIDMYAKCREMESARALLEGMEV-DDVVSWNSMIVGCVRQGLIGEALSMFGRM 319
Query: 90 QRSGLSPDNFTYPFALKACA-RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGA 148
+ D+FT P L A + + H L +KTG ++ +N L+ YA G
Sbjct: 320 HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 149 IGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
+ A +VF+ M + V++W++++ + S EAL +F MR+ P+ + S+LSA
Sbjct: 380 MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
+++ + G+ +H ++ S+ + +L MY KCG ++ A ++FNSM ++L ++
Sbjct: 440 SAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITW 499
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
T +I +G L+++ + YFD M
Sbjct: 500 TCLIVGYAKNG-----------------------------------LLEDAQRYFDSMRT 524
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLD 388
+Y I P EHY CM+DL R+G + ++ M +EP+A + ++ L A R G++ + +
Sbjct: 525 VYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGE 584
Query: 389 D--KLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLE 441
K + +LE YV +N++S +A+N+R MK + + K PGCSW+E
Sbjct: 585 RAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVE 639
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 17/376 (4%)
Query: 47 LPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
L A+ F S P+ + +WN +I S + +E+ F +Q G+ P+ +T L+
Sbjct: 75 LSDAEKLFRSNPVKNTI-SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLR 133
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM-AVRTVV 165
C + L G H T+KTG D N LL YA C I A +F+ M + V
Sbjct: 134 MCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNV 193
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
TW+SM+ Y + +A+ F+++R + N T S+L+AC+ + G +H I
Sbjct: 194 TWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCI 253
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
++ ++ + +AL +MYAKC M+ A + M ++ S+ MI G + +
Sbjct: 254 VKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEAL 313
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHY----GC 341
S+F +M + +K D + IL+ + + +M +K Y
Sbjct: 314 SMFGRMHERDMKIDDFTIPSILNCFA----LSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 342 MVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGA 401
+VD+ A+ G++ A + + M +E + + + + + G S D+ L +G
Sbjct: 370 LVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNG---SYDEALKLFCNMRVGG 425
Query: 402 ---NYVLTANVFSTCA 414
+ ++TA+V S A
Sbjct: 426 ITPDKIVTASVLSASA 441
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 127/252 (50%), Gaps = 3/252 (1%)
Query: 132 DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR 191
D +T NT++ Y++ + A ++F V+ ++W+++I+ Y S S EA ++F EM+
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 192 LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK 251
KPN TL S+L C+ +V + GE IH + + D+ V + L MYA+C +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177
Query: 252 KALLVFNSMP-EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
+A +F +M EKN ++T M++ +G I F + G + + +F +L+AC
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVI 370
+ + G +V+ K ++ ++D+ A+ ++ A +++ M ++ + V
Sbjct: 238 ASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMESARALLEGMEVD-DVVS 295
Query: 371 LRSFLGACRNQG 382
S + C QG
Sbjct: 296 WNSMIVGCVRQG 307
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 177 bits (450), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 207/432 (47%), Gaps = 45/432 (10%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRAL-ANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKA 107
A F +P + +N I L N L VF + S P++ T+ A+ A
Sbjct: 182 LAARMFEKVP-HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
Query: 108 CARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA-VRTVVT 166
CA + +L +G H L +K + L+ Y+ C A VF E+ R +++
Sbjct: 241 CASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLIS 300
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVT------------------------- 201
W+S+I+ + + A+ +F+++ KP+S T
Sbjct: 301 WNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 202 ----------LVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMK 251
L SLLSACS + + G+ IH ++ + + + + T+L +MY KCGL
Sbjct: 361 SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
Query: 252 KALLVFNSMPEKNLQS--FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
A +F+ K + +MIS G HG + I +F + + ++P +F+ +LSA
Sbjct: 421 WARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSA 480
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAV 369
CSH G V++G F M Y KPS EH GCM+DLL R+G ++EA ++I M EP++
Sbjct: 481 CSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM-SEPSSS 539
Query: 370 ILRSFLGACRNQGSVPSLDDKL---MSKLESELGANYVLTANVFSTCASWKDASNLRLAM 426
+ S LG+CR Q P L ++ +++LE E A +V+ +++++ W+D ++R +
Sbjct: 540 VYSSLLGSCR-QHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVI 598
Query: 427 KQKGLKKNPGCS 438
QK L K PG S
Sbjct: 599 DQKQLVKLPGLS 610
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 149/283 (52%), Gaps = 9/283 (3%)
Query: 67 NTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLK 126
N + L + ++ F + SG ++ T L C + G H L +K
Sbjct: 101 NAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMK 157
Query: 127 TGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHV 186
+G + Y +L+ Y+ CG A ++F+++ ++VVT+++ I+ + + + V
Sbjct: 158 SGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSV 217
Query: 187 FQEMR-LANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
F MR ++E+PN VT V+ ++AC+ ++N+ G +H + + +GTAL +MY+
Sbjct: 218 FNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYS 277
Query: 246 KCGLMKKALLVFNSMPE-KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFS 304
KC K A +VF + + +NL S+ +IS + +G + + LF +++ GLKPD +++
Sbjct: 278 KCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWN 337
Query: 305 VILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
++S S +G V E +F+RM+ + + PS++ C+ LL+
Sbjct: 338 SLISGFSQLGKVIEAFKFFERMLSVVMV-PSLK---CLTSLLS 376
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 26/315 (8%)
Query: 95 SPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQ 154
SP+ FT+P LK+CA++ + G + H+ +KTG D +T L+ Y + A +
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 155 VFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN 214
V DEM R + + ++ ++ + + +A +F + R++ NSVT+ S+L C +
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCG---D 144
Query: 215 VSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA 274
+ G +H ++ +M V +GT+L MY++CG A +F +P K++ ++ IS
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 275 LGNHGCQKDVISLFTQMEDM-GLKPDGLSFSVILSACSHM----------GLVDEGKMYF 323
L +G V S+F M +P+ ++F ++AC+ + GLV + + F
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQF 264
Query: 324 DRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGS 383
+ MV ++D+ ++ + AY + + N + S + G
Sbjct: 265 ETMVGT-----------ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 384 VPSLDDKLMSKLESE 398
+ + L KL+SE
Sbjct: 314 HETAVE-LFEKLDSE 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 10/222 (4%)
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
PN T LL +C+K+ +V G +H+ + + + V TAL MY K + AL V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
+ MPE+ + S +S L +G +D +F G + ++ + +L C +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI--- 145
Query: 317 DEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLG 376
EG M + + V +V + +R G A + + +P + V +F+
Sbjct: 146 -EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVP-HKSVVTYNAFIS 203
Query: 377 ACRNQGS---VPSLDDKLMSKLESELGANYVLTANVFSTCAS 415
G VPS+ + LM K SE N V N + CAS
Sbjct: 204 GLMENGVMNLVPSVFN-LMRKFSSE-EPNDVTFVNAITACAS 243
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 199/388 (51%), Gaps = 4/388 (1%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
++P + +W T+I L + + + + + P+ T L+AC+++ +
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSN 178
H+ L+ + + N+L+ YA + +A V M R +T++S++ +
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 179 SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
AL V M + + ++L +SA + + + G+ +H Y ++ + +
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP 298
+L +MY+KCG ++ A VF + ++ S+ ++S L ++G +S F +M +P
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
D ++F ++LSACS+ L D G YF M ++YNI+P VEHY +V +L RAG ++EA +
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687
Query: 359 IKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSK---LESELGANYVLTANVFSTCAS 415
++ M ++PNA+I ++ L ACR +G++ SL + + +K L A Y+L A+++
Sbjct: 688 VETMHLKPNAMIFKTLLRACRYRGNL-SLGEDMANKGLALAPSDPALYILLADLYDESGK 746
Query: 416 WKDASNLRLAMKQKGLKKNPGCSWLEVQ 443
+ A R M +K L K G S +EVQ
Sbjct: 747 PELAQKTRNLMTEKRLSKKLGKSTVEVQ 774
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 181/369 (49%), Gaps = 5/369 (1%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ + +FAW +I A S +L F + SG P+ FT+ +++CA
Sbjct: 77 ARKLFDEMS-HRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA 135
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ +S+GG H +KTG + ++L Y+ CG A ++F + ++W+
Sbjct: 136 GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTM 195
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI++ VG+ EAL + EM A PN T V LL A S + + G++IHS I
Sbjct: 196 MISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRG 254
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+ ++V L T+L + Y++ M+ A+ V NS E+++ +T ++S + K+ + F
Sbjct: 255 IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFL 314
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
+M +GL+P+ ++S ILS CS + +D GK + +++ + S + +VD+ +
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV-GFEDSTDVGNALVDMYMKC 373
Query: 350 GLIQ-EAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTAN 408
+ EA + M + PN V + + + G V LM ++ E+ N V +
Sbjct: 374 SASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 409 VFSTCASWK 417
V C+ +
Sbjct: 433 VLRACSKLR 441
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 154/352 (43%), Gaps = 34/352 (9%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+F W +++ + E++ F ++ GL P+NFTY L C+ V SL G HS
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHS 349
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGF-ARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
T+K G N L+ Y C A A +VF M VV+W+++I V
Sbjct: 350 QTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALF 241
+ + EM +PN VTL +L ACSK+ +V IH+Y+ R HVD + +G +L
Sbjct: 410 DCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLV 469
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+ YA + A V SM ++ ++T +++ G + +S+ M G++ D L
Sbjct: 470 DAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQL 529
Query: 302 SFSVILSACSHMGLVDEGKM---------------YFDRMVRMYN--------------- 331
S +SA +++G ++ GK + +V MY+
Sbjct: 530 SLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI 589
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM---EPNAVILRSFLGACRN 380
P V + +V LA G I A + M M EP++V L AC N
Sbjct: 590 ATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSN 641
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 117/216 (54%), Gaps = 6/216 (2%)
Query: 106 KACARVSSLSH------GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM 159
K+C R+ S G H +K GL + N LL Y I AR++FDEM
Sbjct: 25 KSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 160 AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
+ RTV W+ MI+A+ S + AL +F+EM + PN T S++ +C+ + ++S G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
+H + + + + +G++L ++Y+KCG K+A +F+S+ + S+T+MIS+L
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGAR 204
Query: 280 CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
++ + +++M G+ P+ +F +L A S +GL
Sbjct: 205 KWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 189/387 (48%), Gaps = 18/387 (4%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L +WN ++ + E+L F + R + FT +K CA + L G H+
Sbjct: 150 LVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHA 209
Query: 123 LTLKTGLSSDCYTDNT-LLKFYADCGAIGFARQVFDEMAVRT-VVTWSSMIAAYVGSNSP 180
+ + TG D T ++ FY+ G I A +V++ + V T V +S+I+ + + +
Sbjct: 210 MVVVTG--RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNY 267
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EA + ++ ++PN L S L+ CS ++ G+ IH RN +L L
Sbjct: 268 KEAF-----LLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL 322
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM--EDMGLKP 298
+MY KCG + +A +F ++P K++ S+T MI A +G + +F +M E G+ P
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
+ ++F V++SAC+H GLV EGK F M Y + P EHY C +D+L++AG +E + +
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 359 IKNMPMEPN----AVILRSFLGACRNQGSVPS---LDDKLMSKLESELGANYVLTANVFS 411
++ M N I + L AC + + +LM + E + YVL +N ++
Sbjct: 443 VERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYA 502
Query: 412 TCASWKDASNLRLAMKQKGLKKNPGCS 438
W LR +K KGL K G S
Sbjct: 503 AMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 144/292 (49%), Gaps = 14/292 (4%)
Query: 76 SPTPLESLVFFRRLQRSGLSPDNFTYPF--ALKACARVSSLSHGGVFHSLTLKTGLSSDC 133
S P ++L F ++ R+ SPD ++ F L AC+ +S G H+L +K G +
Sbjct: 62 SGNPNDTLALFLQIHRA--SPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGT 119
Query: 134 YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLA 193
+ L+ Y+ G + + +VF+ + + +V+W+++++ ++ + EAL VF M
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 194 NEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
+ + TL S++ C+ + + G+ +H+ + D+ V LGTA+ Y+ GL+ +A
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV-LGTAMISFYSSVGLINEA 238
Query: 254 LLVFNSMPEKNLQSFTIMISALGNHGC--QKDVISLFTQMEDMGLKPDGLSFSVILSACS 311
+ V+NS+ N+ + +M+++L + GC ++ F M +P+ S L+ CS
Sbjct: 239 MKVYNSL---NVHTDEVMLNSLIS-GCIRNRNYKEAFLLMSRQ--RPNVRVLSSSLAGCS 292
Query: 312 HMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
+ GK +R + S G M D+ + G I +A I + +P
Sbjct: 293 DNSDLWIGKQIHCVALRNGFVSDSKLCNGLM-DMYGKCGQIVQARTIFRAIP 343
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 117/231 (50%), Gaps = 3/231 (1%)
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
A +FDE+ R + + +S +++++ S +P++ L +F ++ A+ +S T +L ACS
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
+ G +H+ + + + TAL +MY+K G + ++ VF S+ EK+L S+ +
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 272 ISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN 331
+S +G K+ + +F M ++ + S ++ C+ + ++ +GK +V
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV--VT 214
Query: 332 IKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC-RNQ 381
+ V M+ + GLI EA + ++ + + V+L S + C RN+
Sbjct: 215 GRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNR 265
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 148/276 (53%), Gaps = 3/276 (1%)
Query: 80 LESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTL 139
L S+V+ +Q+ G PD T L CA + ++ G H LK + +L
Sbjct: 403 LRSIVW---MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSL 459
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
+ Y+ CG + ++FD + R V W++MI YV + + VF+ M L+ +P+S
Sbjct: 460 MVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDS 519
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
VT+ +L+ CS + + G+ +H +I + + + + +MY KCG ++ A F++
Sbjct: 520 VTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDA 579
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
+ K ++T +I A G + +D I+ F QM G P+ +F+ +LS CS G VDE
Sbjct: 580 VAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 320 KMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
+F+ M+RMYN++PS EHY +++LL R G ++EA
Sbjct: 640 YRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 137/264 (51%), Gaps = 8/264 (3%)
Query: 63 LFAWNTIIRA--LANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
+++WN ++R ++ + L F ++ G+ + ++ K+ A S+L G
Sbjct: 177 VYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT 236
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H+L +K GL + + +L+ Y CG +G AR+VFDE+ R +V W +MIA +
Sbjct: 237 HALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQ 296
Query: 181 SEALHVFQEMRLANEK--PNSVTLVSLLSACSKMVNVSAGESIHSYI--TRNHVDMSVEL 236
EAL +F+ M ++ EK PNSV L ++L + + G+ +H+++ ++N+V+ +
Sbjct: 297 WEALGLFRTM-ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF-V 354
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
+ L ++Y KCG M VF ++N S+T ++S +G + M+ G
Sbjct: 355 HSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGF 414
Query: 297 KPDGLSFSVILSACSHMGLVDEGK 320
+PD ++ + +L C+ + + +GK
Sbjct: 415 RPDVVTIATVLPVCAELRAIKQGK 438
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 132/274 (48%), Gaps = 3/274 (1%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRR-LQRSGLSPDNFTYPFALKA 107
A+ F+ + + + W +I LA++ E+L FR + + P++ L
Sbjct: 267 LARRVFDEI-VERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPV 325
Query: 108 CARVSSLSHGGVFHSLTLKT-GLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
V +L G H+ LK+ + + L+ Y CG + R+VF R ++
Sbjct: 326 LGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAIS 385
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
W+++++ Y + +AL M+ +P+ VT+ ++L C+++ + G+ IH Y
Sbjct: 386 WTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYAL 445
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+N +V L T+L MY+KCG+ + + +F+ + ++N++++T MI + + I
Sbjct: 446 KNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIE 505
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGK 320
+F M +PD ++ +L+ CS + + GK
Sbjct: 506 VFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGK 539
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 149/313 (47%), Gaps = 14/313 (4%)
Query: 48 PFAK--SFFNSLPI---TPPLFAWNTIIRALANSPTPLE-SLVFFRRLQRSGLSPDNFTY 101
PF + +F +SLP+ P + + I A N+ LE +L L++ G+ + T+
Sbjct: 58 PFRERDAFPSSLPLHSKNPYIIHRDIQIFARQNN---LEVALTILDYLEQRGIPVNATTF 114
Query: 102 PFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV 161
L+AC R SL HG H GL S+ + L+ Y CG++ A++VFDE
Sbjct: 115 SALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTS 174
Query: 162 RTVVTWSSMIAAYV--GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGE 219
V +W++++ V G + L F EMR N +L ++ + + + G
Sbjct: 175 SNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGL 234
Query: 220 SIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG 279
H+ +N + SV L T+L +MY KCG + A VF+ + E+++ + MI+ L ++
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNK 294
Query: 280 CQKDVISLF-TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYN-IKPSVE 337
Q + + LF T + + + P+ + + IL + + GK +++ N ++
Sbjct: 295 RQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV 354
Query: 338 HYGCMVDLLARAG 350
H G ++DL + G
Sbjct: 355 HSG-LIDLYCKCG 366
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
AW +I + + FR + S PD+ T L C+ + +L G H
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI 545
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
LK S + ++K Y CG + A FD +AV+ +TW+++I AY + +A+
Sbjct: 546 LKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAI 605
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTALFEM 243
+ F++M PN+ T ++LS CS+ V + + R + + S E + + E+
Sbjct: 606 NCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIEL 665
Query: 244 YAKCGLMKKA 253
+CG +++A
Sbjct: 666 LNRCGRVEEA 675
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 179/352 (50%), Gaps = 12/352 (3%)
Query: 103 FALKACARVSS--LSHGGVFHSLTLKTGLSS--DCYTDNTLLKFYADCGAIGFARQVFDE 158
F L++C + + L +G + + TL + S D + +++ Y + G + A +F +
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 159 MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAG 218
+ + VTW+ MI+ V + +EA + +M KP + T LLS+ N+ G
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 219 ESIHSYITRNHV--DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALG 276
+ IH I + D + L +L MYAKCG ++ A +F M +K+ S+ MI L
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLS 545
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
+HG ++LF +M D G KP+ ++F +LSACSH GL+ G F M Y+I+P +
Sbjct: 546 HHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGI 605
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGAC----RNQGSVPSLDDKLM 392
+HY M+DLL RAG ++EA + I +P P+ + + LG C R++ + + M
Sbjct: 606 DHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAM 665
Query: 393 SKLESEL--GANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEV 442
LE + +V NV++ +R M KG+KK PGCSW+ V
Sbjct: 666 RLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVV 717
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 9/202 (4%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
W +I L + E+ + R GL P N TY L + S+L G H +
Sbjct: 434 WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIA 493
Query: 126 KTGLSSDCYT-----DNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
KT + CY N+L+ YA CGAI A ++F +M + V+W+SMI
Sbjct: 494 KT---TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLA 550
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTA 239
+AL++F+EM + +KPNSVT + +LSACS ++ G + + + + ++ +
Sbjct: 551 DKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYIS 610
Query: 240 LFEMYAKCGLMKKALLVFNSMP 261
+ ++ + G +K+A +++P
Sbjct: 611 MIDLLGRAGKLKEAEEFISALP 632
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 27/311 (8%)
Query: 135 TDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMR--L 192
T +++ Y G + A ++F EM R +V+W++MI+ + + EAL +F EM+ +
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 193 ANEKPNSVTLVSLLSACSKM-VNVSA-GESIHSYITRNH---VDMSVELGTALFEMYAKC 247
PN TL+SL AC + V GE +H+ + N VD L +L MYA
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASS 352
Query: 248 GLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVIL 307
GL+ A + N +LQS I+I+ +G + +LF +++ + D +S++ ++
Sbjct: 353 GLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMI 407
Query: 308 SACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM----- 362
G V F ++ + +V M+ L + L EA ++ +M
Sbjct: 408 DGYLEAGDVSRAFGLFQKLHDKDGVTWTV-----MISGLVQNELFAEAASLLSDMVRCGL 462
Query: 363 -PMEPNAVILRSFLGACRN--QGS-VPSLDDKLMSKLESELGANYVLTANVFSTCASWKD 418
P+ +L S GA N QG + + K + + +L L + +++ C + +D
Sbjct: 463 KPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS-MYAKCGAIED 521
Query: 419 ASNLRLAMKQK 429
A + M QK
Sbjct: 522 AYEIFAKMVQK 532
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 69/329 (20%)
Query: 114 LSHGGVFHSLTL-----KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWS 168
LS GG+ H+ L + G + +LL YA G + AR +F+ M R +VT +
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 169 SMIAAYVGSNSPSEALHVFQEM------------------------RLANEKP--NSVTL 202
+M+ YV +EA +F+EM L +E P N V+
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSW 172
Query: 203 VSLLSACSKMVN----------------VSAGESIHSYITRNHV--------DMS---VE 235
+L++ + + VS I YI + + DMS V
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED-- 293
T++ Y + G +++A +F MPE+N+ S+T MIS + ++ + LF +M+
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDV 292
Query: 294 MGLKPDGLSFSVILSACSHMGLVDE--GKMYFDRMVRMYNIKPSVEHYG----CMVDLLA 347
+ P+G + + AC +G+ G+ +++ N +V+H G +V + A
Sbjct: 293 DAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS--NGWETVDHDGRLAKSLVHMYA 350
Query: 348 RAGLIQEAYDII-KNMPMEPNAVILRSFL 375
+GLI A ++ ++ ++ +I+ +L
Sbjct: 351 SSGLIASAQSLLNESFDLQSCNIIINRYL 379
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 201/463 (43%), Gaps = 75/463 (16%)
Query: 56 SLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLS 115
+ IT +F W +I L ++ ++L FR++ +G+ P+ T A+ AC+ + ++
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 116 HGGVFHSLTLKTGL-------------------------------SSDCYTDNTLLKFYA 144
G HS+ +K G + D YT N+++ Y
Sbjct: 370 QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYC 429
Query: 145 DCGAIGFARQVFDEM----------------------------------------AVRTV 164
G G A ++F M R
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNT 489
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
TW+ +IA Y+ + EAL +F++M+ + PNSVT++SLL AC+ ++ IH
Sbjct: 490 ATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGC 549
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ R ++D + AL + YAK G ++ + +F M K++ ++ +I HG
Sbjct: 550 VLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPA 609
Query: 285 ISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVD 344
++LF QM+ G+ P+ + S I+ A MG VDEGK F + Y+I P++EH MV
Sbjct: 610 LALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVY 669
Query: 345 LLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVP---SLDDKLMSKLESELGA 401
L RA ++EA I+ M ++ I SFL CR G + + L S LE E A
Sbjct: 670 LYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFS-LEPENTA 728
Query: 402 NYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ + +++ A + + LKK G SW+EV+N
Sbjct: 729 TESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRN 771
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 18/368 (4%)
Query: 73 LANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGL--S 130
L + + LE+ L + G TY L++C S+ G + H+ + GL
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTE 112
Query: 131 SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEM 190
D + + LL YA CG I AR+VFD M R + TWS+MI AY N E +F+ M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 191 RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLM 250
P+ +L C+ +V AG+ IHS + + + + + ++ +YAKCG +
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 232
Query: 251 KKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
A F M E+++ ++ ++ A +G ++ + L +ME G+ P +++++++
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME---PN 367
+ +G D +M + I V + M+ L G+ +A D+ + M + PN
Sbjct: 293 NQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 351
Query: 368 AVILRSFLGACR-----NQGS-VPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASN 421
AV + S + AC NQGS V S+ K M ++ L N ++ +++S C +DA
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVK-MGFIDDVLVGNSLV--DMYSKCGKLEDARK 408
Query: 422 LRLAMKQK 429
+ ++K K
Sbjct: 409 VFDSVKNK 416
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 155/342 (45%), Gaps = 43/342 (12%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
L FA FF + + AWN+++ A + E++ + +++ G+SP T+
Sbjct: 231 ELDFATKFFRRMR-ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW---- 285
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV---- 161
N L+ Y G A + +M
Sbjct: 286 -------------------------------NILIGGYNQLGKCDAAMDLMQKMETFGIT 314
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
V TW++MI+ + + +AL +F++M LA PN+VT++S +SACS + ++ G +
Sbjct: 315 ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ 281
HS + V +G +L +MY+KCG ++ A VF+S+ K++ ++ MI+ G
Sbjct: 375 HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Query: 282 KDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGC 341
LFT+M+D L+P+ ++++ ++S G E F RM + ++ + +
Sbjct: 435 GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNL 494
Query: 342 MVDLLARAGLIQEAYDIIKNMPME---PNAVILRSFLGACRN 380
++ + G EA ++ + M PN+V + S L AC N
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACAN 536
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 36/315 (11%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+S+ LF W+ +I A + E FR + + G+ PD+F +P L+ CA
Sbjct: 134 ARKVFDSMR-ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCA 192
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ G V HS+ +K G+SS N++L YA CG + FA + F M R V+ W+S
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNS 252
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
++ AY + EA+ + +EM P VT L+ +++ A
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAA----------- 301
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
+D+ ++ T F + A VF ++T MIS L ++G + + +F
Sbjct: 302 MDLMQKMET--FGITAD---------VF---------TWTAMISGLIHNGMRYQALDMFR 341
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
+M G+ P+ ++ +SACS + ++++G V+M I V +VD+ ++
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI-DDVLVGNSLVDMYSKC 400
Query: 350 GLIQEA---YDIIKN 361
G +++A +D +KN
Sbjct: 401 GKLEDARKVFDSVKN 415
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 168/332 (50%), Gaps = 3/332 (0%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ +P + +WN ++ ++ E+L F +++ + DN T + L C+
Sbjct: 348 ARELFDLMP-ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA-VRTVVTWS 168
+S + G H + G ++ N LL Y CG + A F +M+ +R V+W+
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 169 SMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN 228
+++ +AL F+ M++ KP+ TL +LL+ C+ + ++ G++IH ++ R+
Sbjct: 467 ALLTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRD 525
Query: 229 HVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLF 288
+ V + A+ +MY+KC A+ VF ++L + +I +G K+V LF
Sbjct: 526 GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELF 585
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+E+ G+KPD ++F IL AC G V+ G YF M Y+I P VEHY CM++L +
Sbjct: 586 MLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCK 645
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRN 380
G + + + + MP +P +L AC+
Sbjct: 646 YGCLHQLEEFLLLMPFDPPMQMLTRINDACQR 677
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 39/368 (10%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F+ + + P +WN I+R E++V F ++ + P N T + AC+
Sbjct: 216 ARRVFDEI-VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACS 274
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE----------- 158
R +L G V H++ +K + +D ++ Y C + AR+VFD+
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 159 --------------------MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPN 198
M R +V+W++M+ YV ++ EAL MR E +
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 199 SVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFN 258
+VTLV +L+ CS + +V G+ H +I R+ D +V + AL +MY KCG ++ A + F
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 259 SMPE-KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVD 317
M E ++ S+ +++ + G + +S F M+ + KP + + +L+ C+++ ++
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALN 513
Query: 318 EGKMYFDRMVR-MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL- 375
GK ++R Y I + G MVD+ ++ A ++ K + ++ S +
Sbjct: 514 LGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIR 570
Query: 376 GACRNQGS 383
G CRN S
Sbjct: 571 GCCRNGRS 578
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 169/365 (46%), Gaps = 15/365 (4%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A+ F +P +WN +I A A + E FRR+ R G+ ++ LK+C
Sbjct: 115 ARELFEEMPERDG-GSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCG 173
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSS 169
+ L H +K G S + + +++ Y C + AR+VFDE+ + V+W+
Sbjct: 174 LILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNV 233
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
++ Y+ EA+ +F +M N +P + T+ S++ ACS+ + + G+ IH+ +
Sbjct: 234 IVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
V + T++F+MY KC ++ A VF+ K+L+S+T +S G ++ LF
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
M + + +S++ +L H DE D + M ++++ + L +
Sbjct: 354 LMPERNI----VSWNAMLGGYVHAHEWDEA---LDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 350 GLI-----QEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD--KLMSKLESELGAN 402
G+ ++A+ I + N ++ + L G++ S + + MS+L E+ N
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 403 YVLTA 407
+LT
Sbjct: 467 ALLTG 471
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 98/200 (49%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
N ++ Y CG + AR++F+EM R +W+++I A + E +F+ M +
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
+ +L +C ++++ +H + + +V+L T++ ++Y KC +M A V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
F+ + + S+ +++ G + + +F +M ++ ++P + S ++ ACS +
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 317 DEGKMYFDRMVRMYNIKPSV 336
+ GK+ V++ + +V
Sbjct: 280 EVGKVIHAIAVKLSVVADTV 299
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 185/354 (52%), Gaps = 6/354 (1%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+ +W +I A + ++++ F + P+ FT LKAC+ +L G HS
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
L +K + +D + +L+ YA CG I R+VFD M+ R VTW+S+IAA+ E
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFE 242
A+ +F+ M+ + N++T+VS+L AC + + G+ +H+ I +N ++ +V +G+ L
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 243 MYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLS 302
+Y KCG + A V +P +++ S+T MIS + G + + + +M G++P+ +
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFT 488
Query: 303 FSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+S L AC++ + G+ + + + +V ++ + A+ G + EA+ + +M
Sbjct: 489 YSSALKACANSESLLIGRS-IHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM 547
Query: 363 PMEPNAVILRS-FLGACRNQGSVPSLDDKLMSKLESE-LGANYVLTANVFSTCA 414
P E N V ++ +G RN +L KLM ++E+E + + A + STC
Sbjct: 548 P-EKNLVSWKAMIMGYARNGFCREAL--KLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 130/250 (52%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
W +II A A E++ FR ++R L +N T L+AC V +L G H+ +
Sbjct: 353 WTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALH 185
K + + Y +TL+ Y CG A V ++ R VV+W++MI+ SEAL
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 186 VFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYA 245
+EM +PN T S L AC+ ++ G SIHS +NH +V +G+AL MYA
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 246 KCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
KCG + +A VF+SMPEKNL S+ MI +G ++ + L +ME G + D F+
Sbjct: 533 KCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFAT 592
Query: 306 ILSACSHMGL 315
ILS C + L
Sbjct: 593 ILSTCGDIEL 602
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
H++ LK Y N L+ G + +AR+VFD M + VTW++MI Y+
Sbjct: 105 HAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLE 164
Query: 181 SEALHVFQE-----MRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV-DMSV 234
EA +F++ +R NE+ V LL+ CS+ G +H + + V ++ V
Sbjct: 165 DEAFALFEDYVKHGIRFTNER----MFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIV 220
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM 294
E ++L YA+CG + AL F+ M EK++ S+T +ISA G I +F M +
Sbjct: 221 E--SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNH 278
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV------RMYNIKPSVEHYGCMVDLLAR 348
P+ + IL ACS +E + F R V RM IK V ++D+ A+
Sbjct: 279 WFLPNEFTVCSILKACS-----EEKALRFGRQVHSLVVKRM--IKTDVFVGTSLMDMYAK 331
Query: 349 AGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQG 382
G I + + M N V S + A +G
Sbjct: 332 CGEISDCRKVFDGMS-NRNTVTWTSIIAAHAREG 364
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 5/179 (2%)
Query: 50 AKSFFNSLPITPP--LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKA 107
++ FN L P + +W +I ++ E+L F + + + G+ P+ FTY ALKA
Sbjct: 436 SRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKA 495
Query: 108 CARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
CA SL G HS+ K S+ + + L+ YA CG + A +VFD M + +V+W
Sbjct: 496 CANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSW 555
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT 226
+MI Y + EAL + M + + ++LS C ++ E++ S T
Sbjct: 556 KAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCG---DIELDEAVESSAT 611
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 191/388 (49%), Gaps = 9/388 (2%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+N ++ + L++L F + + G+ +F+ A+ AC VS H
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA--VRTVVTWSSMIAAYVGSNSPSE 182
+K G + + LL C + A ++FD+ + + +S+I Y + P +
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDK 503
Query: 183 ALHVFQEMRLANEKP--NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
A+ +F L +K + V+L +L+ C + G IH Y + + LG +L
Sbjct: 504 AVSLFHRT-LCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSL 562
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
MYAKC A+ +FN+M E ++ S+ +IS + ++L+++M + +KPD
Sbjct: 563 ISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDI 622
Query: 301 LSFSVILSACSHM--GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
++ ++++SA + + + F M +Y+I+P+ EHY V +L GL++EA D
Sbjct: 623 ITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDT 682
Query: 359 IKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASW 416
I +MP++P +LR+ L +CR + SV KL+ + E + Y+L +N++S W
Sbjct: 683 INSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFW 742
Query: 417 KDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ +R M+++G +K+P SW+ +N
Sbjct: 743 HRSEMIREEMRERGYRKHPAKSWIIHEN 770
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 152/343 (44%), Gaps = 44/343 (12%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGL-SPDNFTYPFALKACARVSSLSHGG 118
+P + ++ +I + +E+L F R++++GL P+ +T+ L AC RVS S G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFY-ADCG-AIGFARQVFDEMAVRTVVTWSSMIAAYVG 176
H L +K+G + + N+L+ Y D G + ++FDE+ R V +W++++++ V
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 177 SNSPSEALHVFQEM-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
+A +F EM R+ +S TL +LLS+C+ + G +H R + +
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 236 LGTALFEMYAKCGLMKK-------------------------------ALLVFNSMPEKN 264
+ AL Y+K MKK A+ +F ++ EKN
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFD 324
++ +++ +G + LFT M G++ S + + AC GLV E K+
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSEKKV--S 436
Query: 325 RMVRMYNIKPSVEHYGC----MVDLLARAGLIQEAYDIIKNMP 363
+ + IK C ++D+ R + +A ++ P
Sbjct: 437 EQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 7/188 (3%)
Query: 149 IGFARQ---VFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN-EKPNSVTLVS 204
+GF R+ VF ++ TVV+++++I+ + N EAL VF MR A +PN T V+
Sbjct: 127 LGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVA 186
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAK--CGLMKKALLVFNSMPE 262
+L+AC ++ S G IH I ++ SV + +L +Y K L +F+ +P+
Sbjct: 187 ILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQ 246
Query: 263 KNLQSFTIMISALGNHGCQKDVISLFTQMEDM-GLKPDGLSFSVILSACSHMGLVDEGKM 321
+++ S+ ++S+L G LF +M + G D + S +LS+C+ ++ G+
Sbjct: 247 RDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRE 306
Query: 322 YFDRMVRM 329
R +R+
Sbjct: 307 LHGRAIRI 314
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 38/303 (12%)
Query: 53 FFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQR-SGLSPDNFTYPFALKACARV 111
F+ +P + +WNT++ +L ++ F + R G D+FT L +C
Sbjct: 240 LFDEIP-QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 112 SSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADC------------------------- 146
S L G H ++ GL + +N L+ FY+
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 147 ------GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
G + A ++F + + +T+++++A + + +AL +F +M +
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
+L S + AC + E IH + + + + TAL +M +C M A +F+
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 261 PEKNLQSFTIMISALGNH---GCQKDVISLFTQ-MEDMGLKPDGLSFSVILSACSHMGLV 316
P NL S S +G + G +SLF + + + L D +S ++IL+ C +G
Sbjct: 479 P-SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFR 537
Query: 317 DEG 319
+ G
Sbjct: 538 EMG 540
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
LL ++ +V +++H+ + + LG AL Y K G ++A+LVF S+
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGL-KPDGLSFSVILSAC 310
+ S+T +IS + + + +F +M GL +P+ +F IL+AC
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTAC 191
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 187/383 (48%), Gaps = 4/383 (1%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
+WN +I + ++S +L F ++ + PD +T + C+ + LS G +L
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEAL 184
+K G S+ + ++ C + + ++F E+ V +SMI +Y +AL
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDAL 321
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
+F + +P+ T S+LS+ + V + G +HS + + D+ + T+L EMY
Sbjct: 322 RLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKLGFDLDTAVATSLMEMY 380
Query: 245 AKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPDGLSF 303
K G + A+ VF K+L + +I L + + +++F Q+ + LKPD ++
Sbjct: 381 FKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTL 440
Query: 304 SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
IL AC + G V+EG F M + + + P EHY C+++LL R G+I EA DI +P
Sbjct: 441 MGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIP 500
Query: 364 MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGAN--YVLTANVFSTCASWKDASN 421
EP++ I L A + G + + LESE ++ Y++ ++ W+++
Sbjct: 501 FEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVK 560
Query: 422 LRLAMKQKGLKKNPGCSWLEVQN 444
LR AM + LK G S + +++
Sbjct: 561 LRYAMNEHKLKSAQGSSKISIES 583
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 169/391 (43%), Gaps = 47/391 (12%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPF--ALKA 107
A F+ +P + +WNT+I L + + F +QR + P FT+ +L
Sbjct: 89 ALDLFDEMP-ERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVT 147
Query: 108 CARVSSLSHGGVFHSLTLKTGLSS-DCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVT 166
C R HG H + +G+S + N+++ Y G +A VF M R VV+
Sbjct: 148 CVR-----HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 167 WSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAG-ESIHSYI 225
W+ +I + S + AL F MR +P+ T+ ++S CS + +S G +++ I
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
+ S+ LG + +M++KC + ++ +F + + + MI + H C +D +
Sbjct: 263 KMGFLSNSIVLGAGI-DMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDAL 321
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG--------KMYFD-------RMVRMY 330
LF ++PD +FS +LS+ + + ++D G K+ FD ++ MY
Sbjct: 322 RLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMY 380
Query: 331 NIKPSVE---------------HYGCMVDLLARAGLIQEAYDI----IKNMPMEPNAVIL 371
SV+ + ++ LAR E+ I + N ++P+ V L
Sbjct: 381 FKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTL 440
Query: 372 RSFLGACRNQGSVPSLDDKLMSKLESELGAN 402
L AC G V ++ S +E G N
Sbjct: 441 MGILVACCYAGFVNE-GIQIFSSMEKAHGVN 470
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 132/263 (50%), Gaps = 7/263 (2%)
Query: 117 GGVFHSLTLKTGL-SSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYV 175
G V ++L L + + T N LK G + A +FDEM R VV+W++MI+ V
Sbjct: 53 GSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLV 112
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH-SYITRNHVDMSV 234
+ VF +M+ +P T S+L+ S + V GE IH + I ++
Sbjct: 113 SCGFHEYGIRVFFDMQRWEIRPTEFTF-SILA--SLVTCVRHGEQIHGNAICSGVSRYNL 169
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM 294
+ ++ +MY + G+ AL VF +M ++++ S+ +I + + G ++ + F M +M
Sbjct: 170 VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREM 229
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
++PD + S+++S CS + + +GK ++M + S+ G +D+ ++ + +
Sbjct: 230 EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIV-LGAGIDMFSKCNRLDD 288
Query: 355 AYDIIKNMPMEPNAVILRSFLGA 377
+ + + + + ++V+ S +G+
Sbjct: 289 SVKLFRELE-KWDSVLCNSMIGS 310
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 169/338 (50%), Gaps = 40/338 (11%)
Query: 42 ASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY 101
A L A+ +F+ +P + +WN ++ A + ++L F + R G+ P+ T+
Sbjct: 209 AKVKDLENARKYFDRMP-EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 102 PFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADC--------------- 146
+ AC+ + S L + + +C+ LL +A C
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 147 -----------------GAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQE 189
G + ARQ+FD M R VV+W+S+IA Y + + A+ F++
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 387
Query: 190 M-RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCG 248
M + KP+ VT++S+LSAC M ++ G+ I YI +N + ++ +L MYA+ G
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG 447
Query: 249 LMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
+ +A VF+ M E+++ S+ + +A +G + ++L ++M+D G++PD ++++ +L+
Sbjct: 448 NLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
Query: 309 ACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
AC+ GL+ EG+ F + +R P +HY CM DLL
Sbjct: 508 ACNRAGLLKEGQRIF-KSIR----NPLADHYACM-DLL 539
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 192/475 (40%), Gaps = 99/475 (20%)
Query: 33 YLISQFLLSASTISLP--FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQ 90
Y S+ + + + P + + F+S+ P +F N++ + + + L + +
Sbjct: 40 YWASRIISCCTRLRAPSYYTRLIFDSVTF-PNVFVVNSMFKYFSKMDMANDVLRLYEQRS 98
Query: 91 RSGLSPDNFTYPFALKACARVSSL-------------------------------SHGGV 119
R G+ PD F++P +K+ R L S V
Sbjct: 99 RCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKV 158
Query: 120 FHSLTLKTGL--------------------------SSDCYTDNTLLKFYADCGAIGFAR 153
F ++ + G +D + ++ +A + AR
Sbjct: 159 FDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENAR 218
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
+ FD M ++VV+W++M++ Y + +AL +F +M +PN T V ++SACS
Sbjct: 219 KYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
Query: 214 NVSAGESIHSYITRNHVDMSVELGTALFEMYAKC-------------------------- 247
+ S S+ I V ++ + TAL +M+AKC
Sbjct: 279 DPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMI 338
Query: 248 ------GLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMG-LKPDG 300
G M A +F++MP++N+ S+ +I+ ++G I F M D G KPD
Sbjct: 339 SGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDE 398
Query: 301 LSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIK 360
++ +LSAC HM ++ G D +R IK + Y ++ + AR G + EA +
Sbjct: 399 VTMISVLSACGHMADLELGDCIVD-YIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFD 457
Query: 361 NMPMEPNAVILRSFLGA-CRNQGSVPSLDDKLMSKLESE-LGANYVLTANVFSTC 413
M E + V + A N V +L+ L+SK++ E + + V +V + C
Sbjct: 458 EMK-ERDVVSYNTLFTAFAANGDGVETLN--LLSKMKDEGIEPDRVTYTSVLTAC 509
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 186/370 (50%), Gaps = 20/370 (5%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTL 139
++++ F+ ++ D ++ + +C+R L G FH + + D T N L
Sbjct: 210 DAVLVFQHMEEK----DTVSWNAIVASCSRNGKLELGLWFFHQMP-----NPDTVTYNEL 260
Query: 140 LKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
+ + G A QV +M +W++++ YV S EA F +M + + +
Sbjct: 261 IDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDE 320
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
+L +L+A + + V G IH+ + +D V + +AL +MY+KCG++K A L+F +
Sbjct: 321 YSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWT 380
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDMGLKPDGLSFSVILSACSHMGLVDE 318
MP KNL + MIS +G + I LF Q+ ++ LKPD +F +L+ CSH + E
Sbjct: 381 MPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPME 440
Query: 319 GKM-YFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGA 377
+ YF+ M+ Y IKPSVEH ++ + + G + +A +I+ + V R+ LGA
Sbjct: 441 VMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGA 500
Query: 378 CRNQGSVPSLDDKLMSKLESELGAN------YVLTANVFSTCASWKDASNLRLAMKQKGL 431
C + + + K ++ ELG Y++ +N+++ W++ +R M++ G+
Sbjct: 501 CSARKDLKAA--KTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGV 558
Query: 432 KKNPGCSWLE 441
K G SW++
Sbjct: 559 LKEVGSSWID 568
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 47/307 (15%)
Query: 65 AWNTIIRALA--NSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
+W+TI+ ALA S L + V L G PD L+ +S H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAV---ELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 123 LTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSE 182
K G S+ N+L++FY ++ A +VFDEM V++W+S+++ YV S E
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQE 139
Query: 183 ALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM-SVELGTALF 241
+ +F E+ ++ PN + + L+AC+++ G IHS + + ++ +V +G L
Sbjct: 140 GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLI 199
Query: 242 EMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGL 301
+MY KCG M A+LVF M EK D +
Sbjct: 200 DMYGKCGFMDDAVLVFQHMEEK-----------------------------------DTV 224
Query: 302 SFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKN 361
S++ I+++CS G ++ G +F +M P Y ++D ++G A+ ++ +
Sbjct: 225 SWNAIVASCSRNGKLELGLWFFHQMP-----NPDTVTYNELIDAFVKSGDFNNAFQVLSD 279
Query: 362 MPMEPNA 368
MP PN+
Sbjct: 280 MP-NPNS 285
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 146/369 (39%), Gaps = 74/369 (20%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
SL A F+ +P P + +WN+++ S E + F L RS + P+ F++ AL
Sbjct: 105 SLEDAHKVFDEMP-DPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAAL 163
Query: 106 KACARVSSLSHGGVFHSLTLKTGLS-SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV 164
ACAR+ G HS +K GL + N L+ Y CG + A VF M +
Sbjct: 164 AACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT 223
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
V+W++++A+ + L F +M P++VT L+ A
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDA---------------- 263
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDV 284
+ K G A V + MP N S+ +++ N +
Sbjct: 264 -------------------FVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEA 304
Query: 285 ISLFTQMEDMGLKPDGLSFSV---------------ILSACSHMGLVDEGKMYFDRMVRM 329
FT+M G++ D S S+ ++ AC+H K+ D V +
Sbjct: 305 TEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH-------KLGLDSRVVV 357
Query: 330 YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDD 389
+ ++D+ ++ G+++ A + MP + V G RN S+ ++
Sbjct: 358 AS---------ALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAI-- 406
Query: 390 KLMSKLESE 398
KL ++L+ E
Sbjct: 407 KLFNQLKQE 415
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 36/327 (11%)
Query: 39 LLSASTISLPFAKSF--FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSP 96
L+ A S F +F + +P P +WNTI+ NS E+ FF ++ SG+
Sbjct: 260 LIDAFVKSGDFNNAFQVLSDMP-NPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRF 318
Query: 97 DNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF 156
D ++ L A A ++ + G + H+ K GL S + L+ Y+ CG + A +F
Sbjct: 319 DEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMF 378
Query: 157 DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN-EKPNSVTLVSLLSACSKMVNV 215
M + ++ W+ MI+ Y + EA+ +F +++ KP+ T ++LL+ CS
Sbjct: 379 WTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS----- 433
Query: 216 SAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISAL 275
H ++ +E+ FEM ++ + +++ +I A+
Sbjct: 434 -------------HCEVPMEVMLGYFEM-----------MINEYRIKPSVEHCCSLIRAM 469
Query: 276 GNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPS 335
G G +V +++ G DG+++ +L ACS + K +M+ + +
Sbjct: 470 GQRG---EVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKD 526
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNM 362
Y M +L A +E I K M
Sbjct: 527 EYLYIVMSNLYAYHERWREVGQIRKIM 553
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 103/219 (47%), Gaps = 2/219 (0%)
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
+WS+++ A S L E+ EKP++ LV LL VS +H Y+
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
T++ + L +L Y ++ A VF+ MP+ ++ S+ ++S G ++ I
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
LF ++ + P+ SF+ L+AC+ + L G ++V++ K +V C++D+
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 346 LARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
+ G + +A + ++M E + V + + +C G +
Sbjct: 202 YGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKL 239
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 187/400 (46%), Gaps = 14/400 (3%)
Query: 54 FNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSS 113
FN++P + +WN+I+ A+ + L+SL F ++Q G P + L C+R S
Sbjct: 272 FNAVP-EKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD 330
Query: 114 LSHGGVFHSLTLKTGLS-SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIA 172
+ G H LK G S + + L+ Y C I + ++ + + +S++
Sbjct: 331 IQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMT 390
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI------T 226
+ + + + +F M + VTL ++L K +++S ES+HS
Sbjct: 391 SLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVL----KALSLSLPESLHSCTLVHCCAI 446
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
++ V + +L + Y K G + + VF+ + N+ T +I+ +G D +
Sbjct: 447 KSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVK 506
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
+ +M+ M L PD ++ +LS CSH GLV+EG++ FD + Y I P + Y CMVDLL
Sbjct: 507 MLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLL 566
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR--NQGSVPSLDDKLMSKLESELGANYV 404
RAGL+++A ++ + + V S L +CR ++ +++ LE E A Y+
Sbjct: 567 GRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYI 626
Query: 405 LTANVFSTCASWKDASNLRLAMKQKGLKKNPGCSWLEVQN 444
+ + ++ + +R + L + G S + V+N
Sbjct: 627 QVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 137/251 (54%), Gaps = 2/251 (0%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHS 122
L N ++R + + R++ G++ + TY + ++ C+ + G HS
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 123 LTLKTGLS-SDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPS 181
L +K+G + S+ + N L+ +Y+ CG + + + F+ + + V++W+S+++ S
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 182 EALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM-SVELGTAL 240
++L +F +M+ ++P+ +S L+ CS+ ++ +G+ IH Y+ + D+ S+ + +AL
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDG 300
+MY KC ++ + L++ S+P NL+ ++++L + G KD+I +F M D G D
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 301 LSFSVILSACS 311
++ S +L A S
Sbjct: 418 VTLSTVLKALS 428
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 146/330 (44%), Gaps = 5/330 (1%)
Query: 35 ISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGL 94
I + + S + +S A F+ + + + +N +I + L ++ + + GL
Sbjct: 53 IDELIKSGNLLS---AHEAFDEMSVRD-VVTYNLLISGNSRYGCSLRAIELYAEMVSCGL 108
Query: 95 SPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQ 154
T+P L C+ G H + G + + + L+ YA + A +
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALK 168
Query: 155 VFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN 214
+FDEM R + + ++ + + V+ M L N +T ++ CS
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL 228
Query: 215 VSAGESIHSYITRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMIS 273
V G+ +HS + ++ ++S + + L + Y+ CG + ++ FN++PEK++ S+ ++S
Sbjct: 229 VYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVS 288
Query: 274 ALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIK 333
++G D + LF++M+ G +P F L+ CS + GK +++M
Sbjct: 289 VCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDV 348
Query: 334 PSVEHYGCMVDLLARAGLIQEAYDIIKNMP 363
S+ ++D+ + I+ + + +++P
Sbjct: 349 SSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
Query: 134 YTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLA 193
YT N + G + A + FDEM+VR VVT++ +I+ A+ ++ EM
Sbjct: 47 YTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC 106
Query: 194 NEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
+ ++ T S+LS CS + G +H + ++ + +AL +YA L+ A
Sbjct: 107 GLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVA 166
Query: 254 LLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
L +F+ M ++NL +++ G K + ++ +ME G+ +GL++ ++ CSH
Sbjct: 167 LKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD 226
Query: 314 GLVDEGKMYFDRMVRM-YNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILR 372
LV EGK +V+ +NI ++ +VD + G + + +P E + +
Sbjct: 227 RLVYEGKQLHSLVVKSGWNI-SNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWN 284
Query: 373 SFLGACRNQGSV-PSLDDKLMSKLE 396
S + C + GSV SLD L SK++
Sbjct: 285 SIVSVCADYGSVLDSLD--LFSKMQ 307
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRN--HVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
L+ L C + + +++H I+ + H+D+S L EMY+ CGL +A VF
Sbjct: 257 LLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSS--NHVLLEMYSNCGLANEAASVFEK 314
Query: 260 MPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG 319
M EKNL+++ I+I +G +D I +F++ ++ G PDG F I AC +G VDEG
Sbjct: 315 MSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG 374
Query: 320 KMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACR 379
++F+ M R Y I PS+E Y +V++ A G + EA + ++ MPMEPN + + + R
Sbjct: 375 LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSR 434
Query: 380 NQGSVP 385
G++
Sbjct: 435 VHGNLE 440
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
K C L H + D +++ LL+ Y++CG A VF++M+ + +
Sbjct: 262 KICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE 321
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
TW +I + + +A+ +F + P+ + AC + +V G +
Sbjct: 322 TWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESM 381
Query: 226 TRNH-VDMSVELGTALFEMYAKCGLMKKALLVFNSMP-EKNLQSFTIMISALGNHG 279
+R++ + S+E +L EMYA G + +AL MP E N+ + +++ HG
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 22/255 (8%)
Query: 165 VTWSSMIAAYVGSNSPS--------------------EALHVFQEMRLANEKPNSVTLVS 204
+T +SM+ Y + SPS EA+ V + + + L+
Sbjct: 65 LTQNSMVGQYKTTVSPSVAQNVTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLG 124
Query: 205 LLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
L C K + A +H I V A+ EMY+ C + AL VF MPE N
Sbjct: 125 LAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWN 184
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFD 324
+ +M+ N+G ++ I LFT+ ++ G KP+G F+ + S C+ G V EG + F
Sbjct: 185 SGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQ 244
Query: 325 RMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
M R Y I PS+EHY + +LA +G + EA + ++ MPMEP+ + + + R G V
Sbjct: 245 AMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDV 304
Query: 385 PSLDD--KLMSKLES 397
D +L+ KL++
Sbjct: 305 ELGDRCAELVEKLDA 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
E++ L+ G + D K C + +L V H + D N ++
Sbjct: 102 EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAII 161
Query: 141 KFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSV 200
+ Y+ C ++ A +VF+EM T M+ +V + EA+ +F + KPN
Sbjct: 162 EMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGE 221
Query: 201 TLVSLLSACSKMVNVSAGESIHSYITRNH-VDMSVELGTALFEMYAKCGLMKKALLVFNS 259
+ S C+ +V G + R + + S+E ++ +M A G + +AL
Sbjct: 222 IFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVER 281
Query: 260 MP 261
MP
Sbjct: 282 MP 283
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSF 268
C + + +H +IT + + ++ EMY+ CG ++ AL VFNSMPE+NL+++
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 269 TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVR 328
+I +G +D I F++ + G KPDG F I AC +G ++EG ++F+ M +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 329 MYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSV 384
Y I P +EHY +V +LA G + EA +++ MEPN + + + R G +
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVES--MEPNVDLWETLMNLSRVHGDL 364
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 108 CARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTW 167
C +L V H + SD N++++ Y+ CG++ A VF+ M R + TW
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 168 SSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAG-ESIHSYIT 226
+I + + +A+ F + KP+ + AC + +++ G S
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 227 RNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS 286
+ +E +L +M A+ G + +AL SM E N+ + +++ HG D+I
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVHG---DLI- 365
Query: 287 LFTQMEDM 294
L + +DM
Sbjct: 366 LGDRCQDM 373
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
P+ V L +C+ + ++ + +H + ++ +L + M+ +C + A V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 257 FNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
F+ M +K++ S+ +M+ A ++G D + LF +M GLKP+ +F + AC+ +G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 317 DEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLG 376
+E ++FD M + I P EHY ++ +L + G + EA I+++P EP A +
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 377 ACRNQGSVPSLDD 389
R G + L+D
Sbjct: 414 YARLHGDI-DLED 425
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 93 GLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFA 152
G PD + ++CA + SL H H L++ D +N ++ + +C +I A
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 153 RQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKM 212
++VFD M + + +W M+ AY + +ALH+F+EM KPN T +++ AC+ +
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 213 VNVSAGESIHSYITRNH-VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIM 271
+ + H + E + + KCG + +A +P + F
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADF--- 407
Query: 272 ISALGNHGCQKDVISLFTQMEDM 294
A+ N+ I L ME++
Sbjct: 408 WEAMRNYARLHGDIDLEDYMEEL 430
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 141/321 (43%), Gaps = 15/321 (4%)
Query: 50 AKSFFNSLP---ITPPLFAWNTIIRALANSPTPLESLV-FFRRLQRSGLSPDNFTYPFAL 105
A S FNS+ + P L +N +I A + + FF +QR+G+ PD T+ L
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 106 KACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-- 162
C+R +F +T + + D ++ NTLL G + A ++ +M V+
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI 405
Query: 163 --TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
VV++S++I + + EAL++F EMR + V+ +LLS +K+
Sbjct: 406 MPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALD 465
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALG 276
I + + V AL Y K G + VF M + NL +++ +I
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
G K+ + +F + + GL+ D + +S ++ A GLV D M + I P+V
Sbjct: 526 KGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNV 584
Query: 337 EHYGCMVDLLARAGLIQEAYD 357
Y ++D R+ + + D
Sbjct: 585 VTYNSIIDAFGRSATMDRSAD 605
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 147/329 (44%), Gaps = 17/329 (5%)
Query: 63 LFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVS-SLSHGGVFH 121
++A++ +I A S E++ F ++ GL P+ TY + AC + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVGS 177
+ G+ D T N+LL + G AR +FDEM R V ++++++ A
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 178 NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
A + +M + PN V+ +++ +K E+++ + ++ ++++
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD--EALNLFGEMRYLGIALDRV 445
Query: 238 T--ALFEMYAKCGLMKKALLVFNSMP----EKNLQSFTIMISALGNHGCQKDVISLFTQM 291
+ L +Y K G ++AL + M +K++ ++ ++ G G +V +FT+M
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
+ + P+ L++S ++ S GL E F R + ++ V Y ++D L + GL
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF-REFKSAGLRADVVLYSALIDALCKNGL 564
Query: 352 IQEAYDIIKNMPME---PNAVILRSFLGA 377
+ A +I M E PN V S + A
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 132/304 (43%), Gaps = 18/304 (5%)
Query: 147 GAIGFARQVFDEMAV----RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTL 202
G + A+++F+ TV +S++I+AY S EA+ VF M+ +PN VT
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTY 306
Query: 203 VSLLSACSK-MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP 261
+++ AC K + + RN V +L + ++ GL + A +F+ M
Sbjct: 307 NAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMT 366
Query: 262 EKNLQ----SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVD 317
+ ++ S+ ++ A+ G + QM + P+ +S+S ++ + G D
Sbjct: 367 NRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 318 EGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSF 374
E F M R I Y ++ + + G +EA DI++ M ++ + V +
Sbjct: 427 EALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 375 LGACRNQGSVPSLDDKLMSKLESELGANYVLTANV----FSTCASWKDASNLRLAMKQKG 430
LG QG + K+ ++++ E +LT + +S +K+A + K G
Sbjct: 486 LGGYGKQGKYDEV-KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 431 LKKN 434
L+ +
Sbjct: 545 LRAD 548
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 34/317 (10%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + +++T+I A + E+L F ++ G++ D +Y L +V
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV----TWSSMIAAY 174
G+ D T N LL Y G ++VF EM V+ T+S++I Y
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
EA+ +F+E + A + + V +L+ A K V + S+ +T+ + +V
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 235 ELGTALFEMYAKCGLMKKALLVFN--SMP------------EKN--LQSFTIMISALGNH 278
++ + + + M ++ N S+P E N +Q F + + N
Sbjct: 585 VTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNR 644
Query: 279 ---GCQKD------VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRM 329
C++ ++ +F +M + +KP+ ++FS IL+ACS ++ M + + R+
Sbjct: 645 TTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL-RL 703
Query: 330 YNIKPSVEHYGCMVDLL 346
++ K YG + LL
Sbjct: 704 FDNKV----YGVVHGLL 716
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 6/198 (3%)
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP 261
L+ L C ++ + +H IT + + EMY+ C AL VFN MP
Sbjct: 115 LLGLAKLCGEVEALEEARVVHDCIT----PLDARSYHTVIEMYSGCRSTDDALNVFNEMP 170
Query: 262 EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKM 321
++N +++ MI L +G + I +FT+ + G KPD F + AC +G ++EG +
Sbjct: 171 KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 322 YFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQ 381
+F+ M R Y + S+E Y ++++LA G + EA D ++ M +EP+ + + + C Q
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 382 GSVPSLDD--KLMSKLES 397
G + D +L+ KL++
Sbjct: 291 GYLELGDRFAELIKKLDA 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV 165
K C V +L V H T L + Y +T+++ Y+ C + A VF+EM R
Sbjct: 120 KLCGEVEALEEARVVHDCI--TPLDARSY--HTVIEMYSGCRSTDDALNVFNEMPKRNSE 175
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
TW +MI + A+ +F KP+ ++ AC + +++ G +
Sbjct: 176 TWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESM 235
Query: 226 TRNH-VDMSVELGTALFEMYAKCGLMKKAL 254
R++ + +S+E + EM A CG + +AL
Sbjct: 236 YRDYGMVLSMEDYVNVIEMLAACGHLDEAL 265
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 164/362 (45%), Gaps = 17/362 (4%)
Query: 50 AKSFFNSLP---ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
A + FN L + ++++ ++I A ANS E++ F++++ G P TY L
Sbjct: 192 AANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILN 251
Query: 107 ACARVSSLSHGGVFHSLTLKT-GLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV- 164
++ + + +K+ G++ D YT NTL+ A QVF+EM
Sbjct: 252 VFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFS 311
Query: 165 ---VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
VT+++++ Y S+ P EA+ V EM L P+ VT SL+SA ++ + +
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP----EKNLQSFTIMISALGN 277
+ + V T L + + G ++ A+ +F M + N+ +F I GN
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 278 HGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVE 337
G +++ +F ++ GL PD ++++ +L+ G+ E F M R P E
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA-GFVPERE 490
Query: 338 HYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSFLGACRNQGSVPSLDDKLMSK 394
+ ++ +R G ++A + + M + P+ + L A +G + +K++++
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA-RGGMWEQSEKVLAE 549
Query: 395 LE 396
+E
Sbjct: 550 ME 551
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 43/259 (16%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+P + +N++I A A E++ ++ G PD FTY L R +
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV----RTVVTWSSMIAAY 174
G + T N +K Y + G ++FDE+ V +VTW++++A +
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ SE VF+EM+ A P T +L+SA
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA-------------------------- 498
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQ 290
Y++CG ++A+ V+ M + +L ++ +++AL G + + +
Sbjct: 499 ---------YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 291 MEDMGLKPDGLSFSVILSA 309
MED KP+ L++ +L A
Sbjct: 550 MEDGRCKPNELTYCSLLHA 568
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 135/320 (42%), Gaps = 17/320 (5%)
Query: 55 NSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSL 114
N ++P + WNT++ + E F+ ++R+G P+ T+ + A +R S
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 115 SHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA----VRTVVTWSSM 170
+ L G++ D T NT+L A G + +V EM +T+ S+
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 171 IAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
+ AY + +E+ +P +V L +L+ CSK + E S +
Sbjct: 566 LHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL-------QSFTIMISALGNHGCQKD 283
+ ++ +Y + ++ KA V + M E+ S M S + G ++
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEE 685
Query: 284 VISLFTQMEDMGLKPDGLSF-SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCM 342
++ ++ G+KPD +S+ +VI + C + + D +++ + +R I P V Y
Sbjct: 686 ILR---EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE--MRNSGIVPDVITYNTF 740
Query: 343 VDLLARAGLIQEAYDIIKNM 362
+ A + +EA +++ M
Sbjct: 741 IGSYAADSMFEEAIGVVRYM 760
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 240 LFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQMEDMG 295
+ M K G + A +FN + E ++ S+T +ISA N G ++ +++F +ME+ G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 296 LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA 355
KP ++++VIL+ MG ++ I P Y ++ R L QEA
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 356 YDIIKNM 362
+ + M
Sbjct: 299 AQVFEEM 305
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 143/315 (45%), Gaps = 9/315 (2%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + +NTII AL N ++L F + G+ P+ TY ++ S
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIAAY 174
S ++ ++ + T + L+ + G + A +++DEM R+ + T+SS+I +
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ EA H+F+ M + PN VT +L+ K V G + +++ + +
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQ 290
T L + + A +VF M ++ +++I++ L N+G + + +F
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
++ ++PD ++++++ G V++G F + + +KP+V Y M+ R G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVVTYTTMMSGFCRKG 550
Query: 351 LIQEAYDIIKNMPME 365
L +EA + + M E
Sbjct: 551 LKEEADALFREMKEE 565
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 152/368 (41%), Gaps = 52/368 (14%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKA-CAR--------- 110
P F +NT+I L E++ R+ G PD TY + C R
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 111 VSSLSHG--------------------GVFHSLTLKT-----GLSSDCYTDNTLLKFYAD 145
+ + G V +L L T G+ + T N+L++ +
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 146 CGAIGFARQVFDEMAVR----TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVT 201
G A ++ +M R VVT+S++I A+V EA ++ EM + P+ T
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP 261
SL++ + + + + +V L + + K + + + +F M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 262 EKNLQSFTIMISALGNHG------CQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
++ L T+ + L HG C I +F QM G+ PD +++S++L + G
Sbjct: 424 QRGLVGNTVTYTTL-IHGFFQARECDNAQI-VFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPM---EPNAVILR 372
V+ + F+ + R ++P + Y M++ + +AG +++ +D+ ++ + +PN V
Sbjct: 482 VETALVVFEYLQR-SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 373 SFL-GACR 379
+ + G CR
Sbjct: 541 TMMSGFCR 548
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 28/269 (10%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + ++ +I A +E+ + + + + PD FTY SSL +G
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY----------SSLINGF 371
Query: 119 VFHSL------TLKTGLSSDCY----TDNTLLKFYADCGAIGFARQVFDEMAVR----TV 164
H + +S DC+ T NTL+K + + ++F EM+ R
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
VT++++I + + A VF++M P+ +T LL V + Y
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGC 280
+ R+ ++ + + E K G ++ +F S+ K N+ ++T M+S G
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 551
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+++ +LF +M++ G PD +++ ++ A
Sbjct: 552 KEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 23/270 (8%)
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKM----VNVSAGESIHSY-ITRNHVDMSVE 235
+A+++F +M + P+ V LLSA +KM + +S GE + + I+ N S+
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI- 121
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQM 291
L + + + AL V M + + + +++L N C D +SL QM
Sbjct: 122 ----LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
+MG +PD +F+ ++ E DRMV + +P + YG +V+ L + G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGD 236
Query: 352 IQEAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTAN 408
I A ++K M +EP VI + + A N +V + L ++++++ V+T N
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN-LFTEMDNKGIRPNVVTYN 295
Query: 409 VFSTC----ASWKDASNLRLAMKQKGLKKN 434
C W DAS L M ++ + N
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 141/334 (42%), Gaps = 19/334 (5%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + ++ ++ A+A + ++Q G+S + +TY + R S LS
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVG 176
+ +K G D T N+LL + I A + +M T++++I
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
N SEA+ + M + +P+ VT +++ K ++ S+ + + ++ V +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQME 292
+ + + AL +F M K N+ ++ +I L N+G D L + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG------CMVDLL 346
+ + P+ ++FS ++ A G + E + +D M++ +I P + Y CM D L
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 377
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFL-GACR 379
A + ++++ + PN V + + G C+
Sbjct: 378 DEA---KHMFELMISKDCFPNVVTYNTLIKGFCK 408
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/395 (19%), Positives = 156/395 (39%), Gaps = 21/395 (5%)
Query: 57 LPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH 116
L P + N+++ + +++ ++ G PD+FT+ + R + S
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASE 204
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIA 172
+ G D T ++ G I A + +M VV ++++I
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
A + ++AL++F EM +PN VT SL+ S + S + ++
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS----LF 288
+V +AL + + K G + +A +++ M ++++ S+L N C D + +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M P+ ++++ ++ VDEG F M + + +V Y ++ +
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT-YTTLIHGFFQ 443
Query: 349 AGLIQEAYDIIKNMPME---PNAVILRSFLGACRNQGSVPS----LDDKLMSKLESELGA 401
A A + K M + P+ + L N G V + + SK+E ++
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI-- 501
Query: 402 NYVLTANVFSTCASWK--DASNLRLAMKQKGLKKN 434
Y + C + K D +L ++ KG+K N
Sbjct: 502 -YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 147/346 (42%), Gaps = 18/346 (5%)
Query: 50 AKSFFNSL---PITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
A S FN+L P L + T++ AL L +++++GL PD + +
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF-----DEMAV 161
A + +L ++G T NTL+K Y G + + ++ DEM
Sbjct: 398 ASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQ 457
Query: 162 RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES- 220
T + ++ A+ EA ++ +M+ KP+ VT +L A +++ + E
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPE----KNLQSFTIMISALG 276
I + N V +V + Y + G M++AL F M E NL F +I
Sbjct: 518 IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
N V + ME+ G+KPD ++FS +++A S +G + + + M+ I P +
Sbjct: 578 NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG-GIDPDI 636
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSFL-GAC 378
+ + ARAG ++A I+ M + PN VI + G C
Sbjct: 637 HAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 111/277 (40%), Gaps = 36/277 (12%)
Query: 164 VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHS 223
V + + ++ + P EA +F + KP+ +T +L++A ++ + HS
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQ------KHFHS 372
Query: 224 YITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKD 283
++ L K GL +L F +I+A G
Sbjct: 373 LLS-------------LISKVEKNGLKPDTIL------------FNAIINASSESGNLDQ 407
Query: 284 VISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMV 343
+ +F +M++ G KP +F+ ++ +G ++E D M+R ++P+ +V
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 344 DLLARAGLIQEAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPSLDDKLMSK-LESEL 399
I+EA++I+ M ++P+ V + A GS + +D ++ + L +++
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 400 GANYVLTANVFST-CASWKDASNLRLAMKQKGLKKNP 435
N + + C K LR + K L +P
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 167/360 (46%), Gaps = 33/360 (9%)
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL-----KTGLSSDCYTDNTLL 140
F + GL P+ +Y + A A HG +L++ + G+ D + LL
Sbjct: 343 FEAMVAEGLKPNIVSYNALMGAYA-----VHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 397
Query: 141 KFYADCGAIGFARQVF----DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
Y G A++VF E VVT++++I AY + +EA+ +F++M K
Sbjct: 398 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457
Query: 197 PNSVTLVSLLSACS---KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
PN V++ +LL+ACS K VNV +++ S ++++ + Y ++KA
Sbjct: 458 PNVVSVCTLLAACSRSKKKVNV---DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
Query: 254 LLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+ ++ SM +K ++ +FTI+IS + IS +MED+ + +S +L A
Sbjct: 515 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 574
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEP 366
S G V E + F++M +M +P V Y M+ + +A ++ M +EP
Sbjct: 575 YSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 633
Query: 367 NAVILRSFLGACRNQGSVPSLDDKLMSKL-ESELGANYVLTANVFSTCAS---WKDASNL 422
+++ + + A N+G PS LM + E E+ + +FS C + WK A +L
Sbjct: 634 DSIACSALMRAF-NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 692
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P +N +I A +S E+L +++ +G+ PD T+ L A S
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT------VVTWSSMIA 172
+ L + D T N ++ + G A +F+ M + VVT++S++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
Y VF+ M KPN V+ +L+ A + S+ I +N +
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLF 288
V T L Y + KA VF M ++ N+ ++ +I A G++G + + +F
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 289 TQMEDMGLKPDGLSFSVILSACSH 312
QME G+KP+ +S +L+ACS
Sbjct: 449 RQMEQDGIKPNVVSVCTLLAACSR 472
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +N +I A ++ E++ FR++++ G+ P+ + L AC+R
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK-------- 474
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
+ + T LS+ A I ++S I +Y+ +
Sbjct: 475 KKVNVDTVLSA------------AQSRGINL-----------NTAAYNSAIGSYINAAEL 511
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+A+ ++Q MR K +SVT L+S +M S + + ++ E+ +++
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 241 FEMYAKCGLMKKALLVFNSMP----EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
Y+K G + +A +FN M E ++ ++T M+ A LF +ME G+
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 631
Query: 297 KPDGLSFSVILSACSHMG 314
+PD ++ S ++ A + G
Sbjct: 632 EPDSIACSALMRAFNKGG 649
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 160/425 (37%), Gaps = 97/425 (22%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
+N +IR A ++ F +Q+ PD TY + A R L
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT-------VVTWSSMIAAYVGSN 178
+ ++ T N L+ CG+ G R+ + T +VT + +++AY
Sbjct: 206 RAAIAPSRSTYNNLIN---ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 179 SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
S+AL F+ M+ A +P++ T ++ SK+
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL-------------------------- 296
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQ------SFTIMISALGNHGCQKDVISLFTQME 292
G +AL +FNSM EK + +FT ++ G ++ ++F M
Sbjct: 297 ---------GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 293 DMGLKPDGLSFSVIL----------SACSHMGLVDEGKMYFD------------------ 324
GLKP+ +S++ ++ +A S +G + + + D
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 325 ------RMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSFL 375
M+R KP+V Y ++D G + EA +I + M ++PN V + + L
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 467
Query: 376 GACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLA------MKQK 429
AC ++D L + + N TA S S+ +A+ L A M++K
Sbjct: 468 AACSRSKKKVNVDTVLSAAQSRGINLN---TAAYNSAIGSYINAAELEKAIALYQSMRKK 524
Query: 430 GLKKN 434
+K +
Sbjct: 525 KVKAD 529
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 14/270 (5%)
Query: 118 GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-----TVVTWSSMIA 172
G F+ L + G D +T T++ G ++ DEM VR VT++ +I
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIH 407
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+Y +N +EA++VF +M+ A KP+ VT +L+ +K + ++ + +
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLF 288
+ + K G + A +F M ++ NL ++ IM+ ++ + L+
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M++ G +PD +++S+++ H G ++E + F M + N P YG +VDL +
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGK 586
Query: 349 AGLIQEAYDIIKNM---PMEPNAVILRSFL 375
AG +++A+ + M + PN S L
Sbjct: 587 AGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 114/259 (44%), Gaps = 8/259 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +N +I + + E++ F ++Q +G PD TY + A+ L
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+ GLS D +T + ++ G + A ++F EM + +VT++ M+ +
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ + AL ++++M+ A +P+ VT ++ + E++ + + + + +
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQME 292
L +++ K G ++KA + +M N+ + ++S + L M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 293 DMGLKPDGLSFSVILSACS 311
+GL+P +++++LS C+
Sbjct: 637 ALGLRPSLQTYTLLLSCCT 655
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 91 RSGLSPDNFTYPFALKACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
R G P+ TY + + R + L+ VF+ + + G D T TL+ +A G +
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
A+ ++Q M+ P++ T +++
Sbjct: 451 DI-------------------------------AMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP----EKNL 265
K ++ A + + ++ + +++AK + AL ++ M E +
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
+++I++ LG+ G ++ ++FT+M+ PD + +++ G V++ ++
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
M+ ++P+V ++ R I EAY++++NM
Sbjct: 600 MLHA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 14/270 (5%)
Query: 118 GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-----TVVTWSSMIA 172
G F+ L + G D +T T++ G ++ DEM VR VT++ +I
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIH 407
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+Y +N +EA++VF +M+ A KP+ VT +L+ +K + ++ + +
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLF 288
+ + K G + A +F M ++ NL ++ IM+ ++ + L+
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M++ G +PD +++S+++ H G ++E + F M + N P YG +VDL +
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGK 586
Query: 349 AGLIQEAYDIIKNM---PMEPNAVILRSFL 375
AG +++A+ + M + PN S L
Sbjct: 587 AGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 114/259 (44%), Gaps = 8/259 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +N +I + + E++ F ++Q +G PD TY + A+ L
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+ GLS D +T + ++ G + A ++F EM + +VT++ M+ +
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ + AL ++++M+ A +P+ VT ++ + E++ + + + + +
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQME 292
L +++ K G ++KA + +M N+ + ++S + L M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 293 DMGLKPDGLSFSVILSACS 311
+GL+P +++++LS C+
Sbjct: 637 ALGLRPSLQTYTLLLSCCT 655
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 91 RSGLSPDNFTYPFALKACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
R G P+ TY + + R + L+ VF+ + + G D T TL+ +A G +
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
A+ ++Q M+ P++ T +++
Sbjct: 451 DI-------------------------------AMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP----EKNL 265
K ++ A + + ++ + +++AK + AL ++ M E +
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
+++I++ LG+ G ++ ++FT+M+ PD + +++ G V++ ++
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
M+ ++P+V ++ R I EAY++++NM
Sbjct: 600 MLHA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 14/270 (5%)
Query: 118 GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-----TVVTWSSMIA 172
G F+ L + G D +T T++ G ++ DEM VR VT++ +I
Sbjct: 349 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEM-VRDGCQPNTVTYNRLIH 407
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+Y +N +EA++VF +M+ A KP+ VT +L+ +K + ++ + +
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLF 288
+ + K G + A +F M ++ NL ++ IM+ ++ + L+
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M++ G +PD +++S+++ H G ++E + F M + N P YG +VDL +
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDEPVYGLLVDLWGK 586
Query: 349 AGLIQEAYDIIKNM---PMEPNAVILRSFL 375
AG +++A+ + M + PN S L
Sbjct: 587 AGNVEKAWQWYQAMLHAGLRPNVPTCNSLL 616
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/259 (19%), Positives = 114/259 (44%), Gaps = 8/259 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +N +I + + E++ F ++Q +G PD TY + A+ L
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+ GLS D +T + ++ G + A ++F EM + +VT++ M+ +
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAK 516
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ + AL ++++M+ A +P+ VT ++ + E++ + + + + +
Sbjct: 517 ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPV 576
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQME 292
L +++ K G ++KA + +M N+ + ++S + L M
Sbjct: 577 YGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Query: 293 DMGLKPDGLSFSVILSACS 311
+GL+P +++++LS C+
Sbjct: 637 ALGLRPSLQTYTLLLSCCT 655
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 114/277 (41%), Gaps = 38/277 (13%)
Query: 91 RSGLSPDNFTYPFALKACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAI 149
R G P+ TY + + R + L+ VF+ + + G D T TL+ +A G +
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 150 GFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
A+ ++Q M+ P++ T +++
Sbjct: 451 DI-------------------------------AMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP----EKNL 265
K ++ A + + ++ + +++AK + AL ++ M E +
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
+++I++ LG+ G ++ ++FT+M+ PD + +++ G V++ ++
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
M+ ++P+V ++ R I EAY++++NM
Sbjct: 600 MLHA-GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 167/360 (46%), Gaps = 33/360 (9%)
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL-----KTGLSSDCYTDNTLL 140
F + GL P+ +Y + A A HG +L++ + G+ D + LL
Sbjct: 211 FEAMVAEGLKPNIVSYNALMGAYA-----VHGMSGTALSVLGDIKQNGIIPDVVSYTCLL 265
Query: 141 KFYADCGAIGFARQVF----DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
Y G A++VF E VVT++++I AY + +EA+ +F++M K
Sbjct: 266 NSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 325
Query: 197 PNSVTLVSLLSACS---KMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
PN V++ +LL+ACS K VNV +++ S ++++ + Y ++KA
Sbjct: 326 PNVVSVCTLLAACSRSKKKVNV---DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 382
Query: 254 LLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+ ++ SM +K ++ +FTI+IS + IS +MED+ + +S +L A
Sbjct: 383 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCA 442
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEP 366
S G V E + F++M +M +P V Y M+ + +A ++ M +EP
Sbjct: 443 YSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEP 501
Query: 367 NAVILRSFLGACRNQGSVPSLDDKLMSKL-ESELGANYVLTANVFSTCAS---WKDASNL 422
+++ + + A N+G PS LM + E E+ + +FS C + WK A +L
Sbjct: 502 DSIACSALMRAF-NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDL 560
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P +N +I A +S E+L +++ +G+ PD T+ L A S
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR------TVVTWSSMIA 172
+ L + D T N ++ + G A +F+ M + VVT++S++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
Y VF+ M KPN V+ +L+ A + S+ I +N +
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLF 288
V T L Y + KA VF M ++ N+ ++ +I A G++G + + +F
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 289 TQMEDMGLKPDGLSFSVILSACSH 312
QME G+KP+ +S +L+ACS
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSR 340
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 110/258 (42%), Gaps = 35/258 (13%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +N +I A ++ E++ FR++++ G+ P+ + L AC+R
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK-------- 342
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSP 180
+ + T LS+ A I ++S I +Y+ +
Sbjct: 343 KKVNVDTVLSA------------AQSRGINL-----------NTAAYNSAIGSYINAAEL 379
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+A+ ++Q MR K +SVT L+S +M S + + ++ E+ +++
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Query: 241 FEMYAKCGLMKKALLVFNSMP----EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
Y+K G + +A +FN M E ++ ++T M+ A LF +ME G+
Sbjct: 440 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGI 499
Query: 297 KPDGLSFSVILSACSHMG 314
+PD ++ S ++ A + G
Sbjct: 500 EPDSIACSALMRAFNKGG 517
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 160/425 (37%), Gaps = 97/425 (22%)
Query: 66 WNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTL 125
+N +IR A ++ F +Q+ PD TY + A R L
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 126 KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT-------VVTWSSMIAAYVGSN 178
+ ++ T N L+ CG+ G R+ + T +VT + +++AY
Sbjct: 74 RAAIAPSRSTYNNLIN---ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 179 SPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGT 238
S+AL F+ M+ A +P++ T ++ SK+
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL-------------------------- 164
Query: 239 ALFEMYAKCGLMKKALLVFNSMPEKNLQ------SFTIMISALGNHGCQKDVISLFTQME 292
G +AL +FNSM EK + +FT ++ G ++ ++F M
Sbjct: 165 ---------GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 293 DMGLKPDGLSFSVIL----------SACSHMGLVDEGKMYFD------------------ 324
GLKP+ +S++ ++ +A S +G + + + D
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 325 ------RMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSFL 375
M+R KP+V Y ++D G + EA +I + M ++PN V + + L
Sbjct: 276 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL 335
Query: 376 GACRNQGSVPSLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLA------MKQK 429
AC ++D L + + N TA S S+ +A+ L A M++K
Sbjct: 336 AACSRSKKKVNVDTVLSAAQSRGINLN---TAAYNSAIGSYINAAELEKAIALYQSMRKK 392
Query: 430 GLKKN 434
+K +
Sbjct: 393 KVKAD 397
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 14/270 (5%)
Query: 118 GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR-----TVVTWSSMIA 172
G F+ L + G D +T T++ G ++ DEM VR VT++ +I
Sbjct: 344 GFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEM-VRDGCKPNTVTYNRLIH 402
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+Y +N EA++VF +M+ A +P+ VT +L+ +K + ++ + +
Sbjct: 403 SYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSP 462
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLF 288
+ + K G + A +F M + NL +F IMI+ + + L+
Sbjct: 463 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 522
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M++ G +PD +++S+++ H G ++E + F M R N P YG +VDL +
Sbjct: 523 RDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK-NWVPDEPVYGLLVDLWGK 581
Query: 349 AGLIQEAYDIIKNM---PMEPNAVILRSFL 375
AG + +A+ + M + PN S L
Sbjct: 582 AGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 115/259 (44%), Gaps = 8/259 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +N +I + + E++ F ++Q +G PD TY + A+ L
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+ + GLS D +T + ++ G + A ++F EM + +VT++ MIA +
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAK 511
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ + AL ++++M+ A +P+ VT ++ + E + + + R + +
Sbjct: 512 ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPV 571
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQME 292
L +++ K G + KA + +M + N+ + ++S + +L M
Sbjct: 572 YGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
Query: 293 DMGLKPDGLSFSVILSACS 311
+GL P +++++LS C+
Sbjct: 632 ALGLHPSLQTYTLLLSCCT 650
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 39/309 (12%)
Query: 61 PPLFAWNTIIRALANSP--TPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG- 117
P L ++NT+I A S TP ++ ++ SGL PD TY L AC+R S+L
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 118 GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAA 173
VF + D +T N ++ Y CG A ++F E+ ++ VT++S++ A
Sbjct: 318 KVFEDMEAHR-CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYA 376
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
+ + + V+Q+M+ + +T ++ IH Y + +D++
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTI---------------IHMYGKQGQLDLA 421
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMED 293
++L +M G A+ ++T++I +LG + +L ++M D
Sbjct: 422 LQLYK---DMKGLSGRNPDAI------------TYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
+G+KP ++S ++ + G +E + F M+R KP Y M+D+L R +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETR 525
Query: 354 EAYDIIKNM 362
+A+ + ++M
Sbjct: 526 KAWGLYRDM 534
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 137 NTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV--GSNSPSEALHVFQEM 190
N ++ Y+ G A+++ D M R +++++++I A + G +P+ A+ + +
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMV 288
Query: 191 RLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLM 250
R + +P+++T +LLSACS+ N+ + + + + A+ +Y +CGL
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 251 KKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVI 306
+A +F + K + ++ ++ A + V ++ QM+ MG D ++++ I
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 307 LSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
+ G +D + M + P Y ++D L +A EA ++ M
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 10/260 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P L+ +N +I E+ F L+ G PD TY L A AR +
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT-----VVTWSSMIAAYV 175
+ K G D T NT++ Y G + A Q++ +M + +T++ +I +
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
+N EA + EM KP T +L+ +K E S + R+
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 236 LGTALFEMYAKCGLMKKALLVFNSM-PEKNLQSFT---IMISALGNHGCQKDVISLFTQM 291
+ + ++ + +KA ++ M + + S+T +MI L D+ M
Sbjct: 510 AYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Query: 292 EDM-GLKPDGLSFSVILSAC 310
E++ G+ P +S ++ C
Sbjct: 570 EELCGMNPLEISSVLVKGEC 589
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 108/256 (42%), Gaps = 20/256 (7%)
Query: 116 HGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMI 171
HG F S T+ L C + + YA+ A QVF ++ + + SM+
Sbjct: 674 HGWCFGSSTMYETLLHCCVAN----EHYAE------ASQVFSDLRLSGCEASESVCKSMV 723
Query: 172 AAYVGSNSPSEALHVFQEMRLAN-EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
Y P A V + S ++ A K ES+ + ++
Sbjct: 724 VVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGR 783
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSM----PEKNLQSFTIMISALGNHGCQKDVIS 286
++ +L YA+CG ++A +FN+M P ++S I++ AL G +++
Sbjct: 784 TPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
+ +++DMG K S ++L A + G + E K + M + P++ Y M++LL
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM-KAAGYLPTIRLYRMMIELL 902
Query: 347 ARAGLIQEAYDIIKNM 362
+ +++A ++ M
Sbjct: 903 CKGKRVRDAEIMVSEM 918
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 129/312 (41%), Gaps = 44/312 (14%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
++P LF +N +I +L E+ + F R+ + GL P++ TY + R L
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAI----GFARQVFDEMAVRTVVTWSSMIAAY 174
F + TGL Y N+L+ + G I GF ++ ++ TVVT++S++ Y
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
++AL ++ EM P+ T +LLS
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS--------------------------- 515
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQ 290
LF + GL++ A+ +FN M E N++ ++ +MI G +
Sbjct: 516 ----GLF----RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
M + G+ PD S+ ++ G E K++ D + + N + + Y ++ R G
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG-NCELNEICYTGLLHGFCREG 626
Query: 351 LIQEAYDIIKNM 362
++EA + + M
Sbjct: 627 KLEEALSVCQEM 638
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 13/268 (4%)
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAY 174
++H +T K G++ YT TLL G I A ++F+EMA V VT++ MI Y
Sbjct: 494 LYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
S+A +EM P++ + L+ S + + + + +++
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQ 290
T L + + G +++AL V M ++ +L + ++I H +K L +
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
M D GLKPD + ++ ++ A S G E +D M+ + P+ Y +++ L +AG
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV-PNEVTYTAVINGLCKAG 731
Query: 351 LIQEAYDIIKNM-PME--PNAVILRSFL 375
+ EA + M P+ PN V FL
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
++NT+I E+ +F + + GL PDN+TY + ++ + F
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVGSNSP 180
+ G+ D YT + ++ ++ FDEM + V V ++ +I AY S
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
S AL + ++M+ PNS T SL+ S + V + + + ++ +V TAL
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQMEDMGL 296
+ Y K G M K + M KN+ ++T+MI G + L +M + G+
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 297 KPDGLSF 303
PD +++
Sbjct: 782 VPDSITY 788
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 12/271 (4%)
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV----TWSSMIAAYVGSNSP 180
L G D T N LL + G + A ++ E+ R V +++++I+ G
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EA EM KP++ T L+ M V RN + V + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDM---GL 296
+ K ++ F+ M KN+Q T++ + L C+ +S+ ++ EDM G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 297 KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAY 356
P+ +++ ++ S + V+E K+ F+ M RM ++P+V HY ++D + G + +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 357 DIIKNMP---MEPNAVILRSFLGACRNQGSV 384
+++ M + PN + +G G+V
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 160/429 (37%), Gaps = 58/429 (13%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P + +NT+I L E+ +F ++ G+ P TY +K R +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
K G + N L+ + + G++ A ++ D M + T T++++I Y
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS-ACSKMVNVSAGESIHSYITRNHVDMS 233
+ A + +EM N + S++ CS ++ SA + + RN MS
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN---MS 467
Query: 234 VELG--TALFEMYAKCGLMKKALLVFNSMPEKNL---------------------QSFTI 270
G T L K G KAL ++ K ++F I
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 271 MISALGNHGCQKDVISLFT-------------------QMEDMGLKPDGLSFSVILSACS 311
LG GC D +S T +M GLKPD ++S+++
Sbjct: 528 QKEILG-RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 312 HMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNA 368
+M V+E ++D R + P V Y M+D +A +E + M ++PN
Sbjct: 587 NMNKVEEAIQFWDDCKR-NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 369 VILRSFLGACRNQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLA 425
V+ + A G + L + + K S A Y S + ++A L
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 426 MKQKGLKKN 434
M+ +GL+ N
Sbjct: 706 MRMEGLEPN 714
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
FT I+A G ++ + LF++ME+ G+ P+ ++F+ ++ G DE M+ ++MV
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME---PNAVILRSFLGACRNQGSV 384
++P++ Y +V L RA I +AY ++K M + PN ++ + + + GS+
Sbjct: 323 ER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 385 P---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPG 436
+ D ++SK S + Y + +A L M G N G
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 8/247 (3%)
Query: 65 AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLT 124
++NT+I E+ +F + + GL PDN+TY + ++ + F
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVGSNSP 180
+ G+ D YT + ++ ++ FDEM + V V ++ +I AY S
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
S AL + ++M+ PNS T SL+ S + V + + + ++ +V TAL
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQMEDMGL 296
+ Y K G M K + M KN+ ++T+MI G + L +M + G+
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 297 KPDGLSF 303
PD +++
Sbjct: 782 VPDSITY 788
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 12/271 (4%)
Query: 125 LKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV----TWSSMIAAYVGSNSP 180
L G D T N LL + G + A ++ E+ R V +++++I+ G
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
EA EM KP++ T L+ M V RN + V + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQM-EDM---GL 296
+ K ++ F+ M KN+Q T++ + L C+ +S+ ++ EDM G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 297 KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAY 356
P+ +++ ++ S + V+E K+ F+ M RM ++P+V HY ++D + G + +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 357 DIIKNMP---MEPNAVILRSFLGACRNQGSV 384
+++ M + PN + +G G+V
Sbjct: 736 CLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 160/429 (37%), Gaps = 58/429 (13%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P + +NT+I L E+ +F ++ G+ P TY +K R +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY 350
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
K G + N L+ + + G++ A ++ D M + T T++++I Y
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLS-ACSKMVNVSAGESIHSYITRNHVDMS 233
+ A + +EM N + S++ CS ++ SA + + RN MS
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN---MS 467
Query: 234 VELG--TALFEMYAKCGLMKKALLVFNSMPEKNL---------------------QSFTI 270
G T L K G KAL ++ K ++F I
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 271 MISALGNHGCQKDVISLFT-------------------QMEDMGLKPDGLSFSVILSACS 311
LG GC D +S T +M GLKPD ++S+++
Sbjct: 528 QKEILG-RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Query: 312 HMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNA 368
+M V+E ++D R + P V Y M+D +A +E + M ++PN
Sbjct: 587 NMNKVEEAIQFWDDCKR-NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 369 VILRSFLGACRNQGSVP---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLA 425
V+ + A G + L + + K S A Y S + ++A L
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 426 MKQKGLKKN 434
M+ +GL+ N
Sbjct: 706 MRMEGLEPN 714
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 7/175 (4%)
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
FT I+A G ++ + LF++ME+ G+ P+ ++F+ ++ G DE M+ ++MV
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME---PNAVILRSFLGACRNQGSV 384
++P++ Y +V L RA I +AY ++K M + PN ++ + + + GS+
Sbjct: 323 ER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 385 P---SLDDKLMSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKNPG 436
+ D ++SK S + Y + +A L M G N G
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
++L F ++R+G SP +TY +K + + F+ L+ GL+ D N L+
Sbjct: 286 KALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 141 KFYADCGAIGFARQVFDEMAV----------RTVV------------------------- 165
G + VF EM + TV+
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSV 405
Query: 166 -----TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
T+S +I Y +N +AL + +EM P SL++A K A
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE 465
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALG 276
+ + N ++S + + + + KCG + +A+ +FN M + ++ ++ ++S +
Sbjct: 466 LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMV 525
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
G + SL +ME+ G + D S ++IL+ + G+ F+ ++ IKP
Sbjct: 526 KAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE-TIKHSGIKPDG 584
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMP---MEPNAVILRSFLGACRN 380
Y ++ A AG+ +EA +++ M E +A+ S L A N
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGN 631
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 12/277 (4%)
Query: 165 VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSY 224
+T+S++I++Y A+ +F EM+ +P +LL K+ V +
Sbjct: 234 ITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEE 293
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTI----MISALGNHGC 280
+ R +V T L + K G + +A + M L + +++ LG G
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSAC-SHMGLVDEGKMYFDRMVRMYNIKPSVEHY 339
+++ ++F++M P +S++ ++ A V E +FD+M + ++ PS Y
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM-KADSVSPSEFTY 412
Query: 340 GCMVDLLARAGLIQEAYDIIKNM-----PMEPNAVI-LRSFLGACRNQGSVPSLDDKLMS 393
++D + +++A +++ M P P A L + LG + + L +L
Sbjct: 413 SILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Query: 394 KLESELGANYVLTANVFSTCASWKDASNLRLAMKQKG 430
+ Y + F C +A +L MK +G
Sbjct: 473 NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 128/296 (43%), Gaps = 15/296 (5%)
Query: 86 FRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
FR ++ G++PD F+Y + +++ ++ ++ GL+ + N LL +
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 146 CGAIGFARQVFDEMAVR----TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVT 201
G I A+++ DEM+V+ VT+ ++I Y S +EA +F EM+L P+S
Sbjct: 675 SGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFV 734
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP 261
+L+ C ++ +V +I + S AL K G + V N +
Sbjct: 735 YTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 262 EKNLQSF--------TIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHM 313
+ + F IMI L G + LF QM++ L P ++++ +L+ M
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 314 GLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAV 369
G E FD + I+P Y +++ + G+ +A ++ M NAV
Sbjct: 854 GRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTTKALVLVDQM-FAKNAV 907
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 145/346 (41%), Gaps = 16/346 (4%)
Query: 50 AKSFFNSL---PITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
AK+ F+ + + P A+ ++I + +++ + +TY +K
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV- 165
L + +G + TL+K + G A +V EM + +
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 166 ---TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
++S+I + EA EM KPN+ T + +S + ++ +
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNL----QSFTIMISALGNH 278
+ V + L T L Y K G + +A + SM ++ + +++T++++ L +
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 279 GCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
D +F +M G+ PD S+ V+++ S +G + + FD MV + P+V
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EGLTPNVII 664
Query: 339 YGCMVDLLARAGLIQEAYDIIKNMPME---PNAVILRSFL-GACRN 380
Y ++ R+G I++A +++ M ++ PNAV + + G C++
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 50 AKSFFNSLPIT---PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
AK + + + P + TII S E+ F ++ GL PD+F Y +
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQV--------FDE 158
C R++ + T K G +S N L+ + G +V FD
Sbjct: 741 GCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 159 MAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSA- 217
VT++ MI + A +F +M+ AN P +T SLL+ KM +
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 218 ----GESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKN 264
E+I + I +H+ SV + + K G+ KAL++ + M KN
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSV-----IINAFLKEGMTTKALVLVDQMFAKN 905
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 9/312 (2%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + ++T+I +L ++L F + G+ PD FTY + S
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIAAY 174
S L+ ++ + T N+L+ +A G + A ++FDEM R+ +VT++S+I +
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ EA +F M + P+ VT +L++ K V G + ++R + +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQ 290
T L + + A +VF M N+ ++ ++ L +G + + +F
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
++ ++PD +++++ G V++G F + + +KP V Y M+ + G
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKKG 534
Query: 351 LIQEAYDIIKNM 362
L +EAY + M
Sbjct: 535 LKEEAYTLFIKM 546
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 139/331 (41%), Gaps = 50/331 (15%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + ++ ++ A+A + F +++ G+S + +TY + R S LS
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+K G T N+LL + I A + D+M VT+++++
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
N SEA+ + + M + +P+ VT G I+ R D+++ L
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTY---------------GAVINGLCKRGEPDLALNL 227
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQME 292
N M + +++ ++ S + + C+ D ++LFT+M+
Sbjct: 228 --------------------LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 293 DMGLKPDGLSFSVILSA-CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
+ G++PD ++S ++S C++ D ++ D + R I P+V + ++D A+ G
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER--KINPNVVTFNSLIDAFAKEGK 325
Query: 352 IQEAYDIIKNM---PMEPNAVILRSFL-GAC 378
+ EA + M ++PN V S + G C
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 112/259 (43%), Gaps = 8/259 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + +N++I A A +E+ F + + + P+ TY + L
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
+L + D T NTL+ + + ++F +M+ R VT++++I +
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
++ A VF++M PN +T +LL K + + Y+ ++ ++ +
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQ 290
+ E K G ++ +F S+ K ++ ++ MIS G +++ +LF +
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 291 MEDMGLKPDGLSFSVILSA 309
M++ G PD +++ ++ A
Sbjct: 546 MKEDGPLPDSGTYNTLIRA 564
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 132/319 (41%), Gaps = 14/319 (4%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKA-CARVSSLSHGGV 119
P + T++ L E++ R+ G PD TY + C R +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEM---AVR-TVVTWSSMIAAYV 175
+ + K + +D +T++ + A +F EM +R V T+SS+I+
Sbjct: 228 LNKME-KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
S+A + +M PN VT SL+ A +K + E + + + +D ++
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQK----DVISLFTQM 291
+L + + +A +F M K+ + + L N C+ D + LF M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
GL + ++++ ++ D +M F +MV + P++ Y ++D L + G
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCKNGK 465
Query: 352 IQEA---YDIIKNMPMEPN 367
+++A ++ ++ MEP+
Sbjct: 466 LEKAMVVFEYLQKSKMEPD 484
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 143/336 (42%), Gaps = 12/336 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + +NTII L ++L F + G+ PD FTY + S
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIAAY 174
S ++ ++ + T + L+ + G + A +++DEM R+ + T+SS+I +
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ EA H+F+ M + PN VT +L+ K V G + +++ + +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSM----PEKNLQSFTIMISALGNHGCQKDVISLFTQ 290
T L + + A +VF M N+ ++ I++ L +G + +F
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
++ ++PD ++++++ G V++G F + + + P+V Y M+ R G
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIAYNTMISGFCRKG 552
Query: 351 LIQEAYDIIKNMPME---PNAVILRSFLGACRNQGS 383
+EA ++K M + PN+ + + A G
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 164/384 (42%), Gaps = 22/384 (5%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +N ++ A+A + ++Q G+S D +TY + R S LS
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+ +K G D T ++LL Y I A + D+M T++++I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
N SEA+ + +M +P+ VT ++++ K ++ S+ + + ++ V +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQME 292
+ + K M AL +F M K ++ +++ +IS L N+G D L + M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG------CMVDLL 346
+ + P+ ++FS ++ A G + E + +D M++ +I P + Y CM D L
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 379
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFL-GACRNQGSVPSLDDKLMSKL-ESELGANYV 404
A + ++++ + PN V + + G C+ + ++ L ++ + L N V
Sbjct: 380 DEA---KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME--LFREMSQRGLVGNTV 434
Query: 405 LTANVFSTCASWKDASNLRLAMKQ 428
+ +D N ++ KQ
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQ 458
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 125/274 (45%), Gaps = 31/274 (11%)
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKM----VNVSAGESIHSYITRNHVDMSVEL 236
+A+ +F +M + P+ V LLSA +KM + +S GE + + + +S +L
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT------LGISHDL 118
Query: 237 GTALFEMYAKCGLMKK----ALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLF 288
T + ++ C + AL V M + + + +S+L N C D ++L
Sbjct: 119 YT--YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
QM +MG KPD +F+ ++ E D+MV+ +P + YG +V+ L +
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCK 235
Query: 349 AGLIQEAYDIIKNMP---MEPNAVILRSFL-GACRNQGSVPSLDDKLMSKLESELGANYV 404
G I A ++K M +E + VI + + G C+ + +L+ L ++++++ V
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN--LFTEMDNKGIRPDV 293
Query: 405 LTANVFSTC----ASWKDASNLRLAMKQKGLKKN 434
T + +C W DAS L M ++ + N
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 137/337 (40%), Gaps = 44/337 (13%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG 93
L+ L+ + F S + A N +I++ E L +R+++ +G
Sbjct: 158 LVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENG 217
Query: 94 LSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFAR 153
+ P +TY F L GL S + D+ A
Sbjct: 218 IEPTLYTYNF---------------------LMNGLVSAMFVDS--------------AE 242
Query: 154 QVFDEMAVR----TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSAC 209
+VF+ M +VT+++MI Y + +A+ ++M + + +T ++++ AC
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 210 SKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NL 265
+ + +++ + + + + + K G + + VF +M K N+
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
+T++I G +D I L +M D G KPD +++SV+++ G V+E YF
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF-H 421
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
R + + Y ++D L +AG + EA + + M
Sbjct: 422 TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 149/400 (37%), Gaps = 57/400 (14%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC---------- 108
I P + +NT+I+ + +++ R ++ G D TY ++AC
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 109 ARVSSLSHGGVF---HSLTL------KTGLSSDCYT--DN--------------TLLKFY 143
A + G+ H+ +L K G ++ YT +N L+ Y
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 144 ADCG----AIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNS 199
A G AI ++ DE VVT+S ++ + EAL F R NS
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS 432
Query: 200 VTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNS 259
+ SL+ K V E + ++ AL + + K + +A+ +F
Sbjct: 433 MFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR 492
Query: 260 MPE-----KNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
M E + + ++TI++S + ++ + L+ M D G+ P F + + G
Sbjct: 493 MEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSG 552
Query: 315 LVDEGKMYFDRMVRMYNIKPSVEHYGC--MVDLLARAGLIQEA---YDIIKNMPMEPNAV 369
V D + M I + C M++ L +AG I+EA D I E
Sbjct: 553 KVARACKILDELAPMGVILDA----ACEDMINTLCKAGRIKEACKLADGITERGREVPGR 608
Query: 370 ILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTANV 409
I + A R G D M + S++G Y +V
Sbjct: 609 IRTVMINALRKVGKA----DLAMKLMHSKIGIGYERMGSV 644
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 146/322 (45%), Gaps = 14/322 (4%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + + TII AL N ++L F + G+ P+ TY ++ S
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIAAY 174
S ++ ++ + T + L+ + G + A +++DEM R+ + T+SS+I +
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAG-ESIHSYITRNHVDMS 233
+ EA H+F+ M + PN VT +L+ K V G E R V +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 234 VELGTALFEMY--AKCGLMKKAL--LVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFT 289
V T + ++ C + +K +V + +P ++ +++I++ L +G + + +F
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKALVVFE 489
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
++ ++PD ++++++ G V++G F + + +KP+V Y M+ R
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL-SLKGVKPNVIIYTTMISGFCRK 548
Query: 350 GLIQEAYDIIKNMPME---PNA 368
GL +EA + + M + PN+
Sbjct: 549 GLKEEADALFREMKEDGTLPNS 570
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 137/312 (43%), Gaps = 9/312 (2%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + +N++IR L N ++ + ++P+ T+ + A + L
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
+ +K + D +T ++L+ + + A+ +F+ M + VVT++++I +
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ E + +F+EM N+VT +L+ + + + I + + V +
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 235 ELGTALFEMYAKCGLMKKALLVFN----SMPEKNLQSFTIMISALGNHGCQKDVISLFTQ 290
+ L + K G ++KAL+VF S E ++ ++ IMI + G +D LF
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
+ G+KP+ + ++ ++S GL +E F R ++ P+ Y ++ R G
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALF-REMKEDGTLPNSGTYNTLIRARLRDG 584
Query: 351 LIQEAYDIIKNM 362
+ ++IK M
Sbjct: 585 DKAASAELIKEM 596
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 141/334 (42%), Gaps = 19/334 (5%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +N ++ A+A + R+Q +S D ++Y + R S L
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+K G D T ++LL Y I A + D+M V VT++++I
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
N SEA+ + M +P+ T ++++ K ++ S+ + + ++ V +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQME 292
T + + + AL +F M K N+ ++ +I L N+G D L + M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG------CMVDLL 346
+ + P+ ++FS ++ A G + E + +D M++ +I P + Y CM D L
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 376
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFL-GACR 379
A + ++++ + PN V + + G C+
Sbjct: 377 DEA---KHMFELMISKDCFPNVVTYNTLIKGFCK 407
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 25/271 (9%)
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKM----VNVSAGESIHSYITRNHVDMSVEL 236
+A+ +F EM + P+ V LLSA +KM + +S GE + ++ +S +L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ------NLRISYDL 115
Query: 237 GT--ALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQ 290
+ L + + + AL V M + + + +S+L N C + ++L Q
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
M M +P+ ++F+ ++ E DRMV +P + YG +V+ L + G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRG 234
Query: 351 LIQEAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTA 407
I A ++K M +E + VI + + A N +V + L ++++++ V+T
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN-LFTEMDNKGIRPNVVTY 293
Query: 408 NVFSTC----ASWKDASNLRLAMKQKGLKKN 434
N C W DAS L M ++ + N
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 133/313 (42%), Gaps = 10/313 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + +NTII L ++ F +++ G+ PD FTY + S
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT-----VVTWSSMIAA 173
S L+ ++ D N L+ + G + A +++DEM VV ++++I
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
+ E + VF+EM N+VT +L+ + + + + + + V
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFT 289
+ L + G ++ AL+VF M +++++ ++T MI AL G +D LF
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
+ G+KP+ ++++ ++S GL +E F M + P+ Y ++ R
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM-KEDGPLPNSGTYNTLIRARLRD 544
Query: 350 GLIQEAYDIIKNM 362
G + ++IK M
Sbjct: 545 GDEAASAELIKEM 557
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 133/310 (42%), Gaps = 8/310 (2%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + ++ ++ A+A + ++Q G+S + +TY + R S LS
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+K G T N+LL + I A + D+M VT+++++
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
N SEA+ + + M + +P+ VT ++++ K ++ + + + ++ V +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQME 292
+ + K M A +FN M K ++ ++ +IS L N+G D L + M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
+ + PD + F+ ++ A G + E + +D MV+ + P V Y ++ + +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 353 QEAYDIIKNM 362
+E ++ + M
Sbjct: 373 EEGMEVFREM 382
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 145/335 (43%), Gaps = 20/335 (5%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKA-CARVSSLSHGGV 119
P + T++ L E++ R+ G PD TY + C R +
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV 175
+ + K + +D NT++ + A +F++M + V T++ +I+
Sbjct: 238 LNKME-KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRN-HVDMSV 234
S+A + +M N P+ V +L+ A K + E ++ + ++ H V
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHG------CQKDVISLF 288
L + + K +++ + VF M ++ L T+ + L HG C + +F
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL-IHGFFQARDCD-NAQMVF 414
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
QM G+ PD ++++++L + G V+ + F+ M + ++K + Y M++ L +
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKR-DMKLDIVTYTTMIEALCK 473
Query: 349 AGLIQEAYDIIKNMPM---EPNAVILRSFL-GACR 379
AG +++ +D+ ++ + +PN V + + G CR
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 508
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 27/272 (9%)
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKM----VNVSAGESIHSY-ITRNHVDMSVE 235
+A+ +F +M + P+ V LLSA +KM + +S GE + + I+ N S+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI- 115
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS----LFTQM 291
+ + + AL + M + + +++L N C + IS L QM
Sbjct: 116 ----FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
+MG +PD ++F+ ++ E +RMV + +P + YG +++ L + G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV-VKGCQPDLVTYGAVINGLCKRGE 230
Query: 352 IQEAYDIIKNMP---MEPNAVILRSFL-GACRNQGSVPSLDDKLMSKLESELGANYVLTA 407
A +++ M +E + VI + + G C+ + + D L +K+E++ V T
Sbjct: 231 PDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD--LFNKMETKGIKPDVFTY 288
Query: 408 NVFSTC----ASWKDASNLRLAMKQKGLKKNP 435
N +C W DAS L M +K + NP
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNI--NP 318
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 139 LLKFYADCGAIGFARQVFDEM----AVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
++ YA G + + +VFD M V TV T++ +I V +A+ + EM LA
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKAL 254
N T ++ + + + + + +D+ + AL + K G M+ AL
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 255 LVFNSMPEKNLQS----FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
V M +N+ + I+I G + L QM+ G+KPD +++ +SAC
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA---YDIIKNMPMEPN 367
S G ++ + M + +KP+++ Y ++ ARA L ++A Y+ +K M ++P+
Sbjct: 775 SKAGDMNRATQTIEEMEAL-GVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPD 833
Query: 368 AVILRSFLGACRNQGSV 384
+ L + ++ S+
Sbjct: 834 KAVYHCLLTSLLSRASI 850
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 143/337 (42%), Gaps = 12/337 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P+ ++T++ + LV F+RL+ G +P TY + +V +S
Sbjct: 445 IDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
+ + G+ + T + ++ + A VF++M V+ ++++I+A+
Sbjct: 505 EVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAF 564
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
G + A+ +EM+ +P + T + ++ +K ++ + + R +V
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTV 624
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMP----EKNLQSFTIMISALGNHGCQKDVISLFTQ 290
L + M+KA+ + + M N ++T ++ + G FT+
Sbjct: 625 HTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR 684
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
+++ GL D ++ +L AC G + + + + + NI + Y ++D AR G
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRM-QSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 351 LIQEAYDIIKNMPME---PNAVILRSFLGACRNQGSV 384
+ EA D+I+ M E P+ SF+ AC G +
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDM 780
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 108/266 (40%), Gaps = 35/266 (13%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +N +I L +++ + +G+S + TY ++ A V +
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVG 176
+ GL D +T LLK G + A V EM+ R + ++ +I +
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
EA + Q+M+ KP+ T S +SACSK AG+ N ++E
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK-----AGDM-------NRATQTIE- 788
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGL 296
EM +AL V + N++++T +I + +S + +M+ MG+
Sbjct: 789 -----EM--------EALGV-----KPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 297 KPDGLSFSVILSACSHMGLVDEGKMY 322
KPD + +L++ + E +Y
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIY 856
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 130/309 (42%), Gaps = 15/309 (4%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P + +N II A ++ + +Q+ P T+ + A+ +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV----TWSSMIAAY 174
+ + G +T N L+ + + A ++ DEM + V T++ ++ Y
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 175 VGSNSPSEALHVFQEMRLANE--KPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+A F RL NE + T +LL AC K + + ++ ++ ++
Sbjct: 670 ASVGDTGKAFEYF--TRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLF 288
+ + L + +A+ G + +A + M ++ ++ ++T ISA G
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMV-DLLA 347
+ME +G+KP+ +++ ++ + L ++ ++ M M IKP Y C++ LL+
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAM-GIKPDKAVYHCLLTSLLS 846
Query: 348 RAGLIQEAY 356
RA I EAY
Sbjct: 847 RAS-IAEAY 854
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 115/252 (45%), Gaps = 16/252 (6%)
Query: 139 LLKFYADCGAIGFARQVFDEMAVRTVV----TWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
++KFY G + AR+ F+ M R + ++S+I AY EAL ++M+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 195 EKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGL--MKK 252
+ + VT ++ SK + A + R H ++ + + +YA C M++
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI--IYAHCQTCNMER 432
Query: 253 ALLVFNSMPEKNLQS----FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILS 308
A + M E+ + + + M+ +K + +F ++++ G P +++ +++
Sbjct: 433 AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN 492
Query: 309 ACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PME 365
+ +G + + + R+++ +K +++ Y M++ + A+ + ++M M+
Sbjct: 493 LYTKVGKISKA-LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMK 551
Query: 366 PNAVILRSFLGA 377
P+ ++ + + A
Sbjct: 552 PDVILYNNIISA 563
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 141/334 (42%), Gaps = 12/334 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +NT++ ++ ++ G+ D TY + R + ++ G +
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVG 176
K + + T NTL+ +++ G + A Q+ +EM + VT++++I ++
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ EAL +F M P+ V+ LL K + + RN V +
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQME 292
T + + K G + +A+++ N M + + + SAL N C+ K + ++
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
+GL P+G+ +S ++ C MG + E ++ M+ + + + +V L +AG +
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFT-FNVLVTSLCKAGKV 564
Query: 353 QEAYDIIKNMPME---PNAVILRSFLGACRNQGS 383
EA + ++ M + PN V + N G
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 137/338 (40%), Gaps = 22/338 (6%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P ++ N I+ ++ S + F + + + + PD T+ + S
Sbjct: 196 PSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYL 255
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
K+G + T NT+L +Y G A ++ D M + V T++ +I
Sbjct: 256 MQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAG-----ESIHSYITRNHVD 231
SN ++ + ++MR PN VT +L++ S V E + ++ NHV
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 232 MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISL 287
+ AL + + G K+AL +F M K L S+ +++ L +
Sbjct: 376 FN-----ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 430
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+ +M+ G+ ++++ ++ G +DE + + M + I P + Y +++
Sbjct: 431 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK-DGIDPDIVTYSALINGFC 489
Query: 348 RAGLIQEAYDI---IKNMPMEPNAVILRSFLGACRNQG 382
+ G + A +I I + + PN +I + + C G
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 14/315 (4%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + ++ +I + R+ R GLSP+ Y + C R+ L
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIG----FARQVFDEMAVRTVVTWSSMIAAY 174
+ + G + D +T N L+ G + F R + + + V++ +I Y
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
S +A VF EM P T SLL K ++ E + +
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNL----QSFTIMISALGNHGCQKDVISLF-- 288
+ L K G + KA+ +F M ++++ ++T +IS L G K VI++
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTVIAILFA 711
Query: 289 TQMEDMG-LKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+ E G + P+ + ++ + G G +YF + P + M+D +
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG-IYFREQMDNLGHTPDIVTTNAMIDGYS 770
Query: 348 RAGLIQEAYDIIKNM 362
R G I++ D++ M
Sbjct: 771 RMGKIEKTNDLLPEM 785
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 133/324 (41%), Gaps = 19/324 (5%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P +NT+I +N L + + GLSP++ T+ + +S G
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDG-----HISEGN 388
Query: 119 VFHSLTL-----KTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSS 169
+L + GL+ + LL AR + M V +T++
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
MI + EA+ + EM P+ VT +L++ K+ + I I R
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSM----PEKNLQSFTIMISALGNHGCQKDVI 285
+ + + + L + G +K+A+ ++ +M ++ +F +++++L G +
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
M G+ P+ +SF +++ + G + FD M ++ + P+ YG ++
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLLKG 627
Query: 346 LARAGLIQEAYDIIKNMPMEPNAV 369
L + G ++EA +K++ P AV
Sbjct: 628 LCKGGHLREAEKFLKSLHAVPAAV 651
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 112/273 (41%), Gaps = 21/273 (7%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFT-YPFALKACARVSSLSHGGV 119
P L +N ++ + S + +R + +G+ PD T + L C + L G
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES-NMLEIGLK 850
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV-------TWSSMIA 172
+ G+ D YT N L+ + C A G FD + V T + T +M++
Sbjct: 851 ILKAFICRGVEVDRYTFNMLI---SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
++ E+ V EM P S + L++ ++ ++ + + + +
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNL----QSFTIMISALGNHGCQKDVISLF 288
+A+ AKCG +A L+ M + L SFT ++ +G + + L
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 1027
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKM 321
M + GLK D +S++V+++ GL +G M
Sbjct: 1028 VVMSNCGLKLDLVSYNVLIT-----GLCAKGDM 1055
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 162/402 (40%), Gaps = 23/402 (5%)
Query: 50 AKSFFNSL---PITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
K FF + P +F +N +I + + F ++ GL PD TY +
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR---- 162
+V L F D T N L+ + G + + + EM
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 163 TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
VV++S+++ A+ +A+ + +MR PN T SL+ A K+ N+S +
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNH 278
+ + + V+ +V TAL + MK+A +F M NL S+ +I
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 279 GCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEH 338
+ L +++ G+KPD L + + + ++ K+ + M + IK +
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLI 544
Query: 339 YGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFL----GACRNQGSVPSLDDKLMSK 394
Y ++D ++G E ++ M V + +F G C+N+ ++D ++
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD--YFNR 602
Query: 395 LESELG--AN-YVLTANVFSTCAS--WKDASNLRLAMKQKGL 431
+ ++ G AN + TA + C + A+ L M QKGL
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 171/413 (41%), Gaps = 56/413 (13%)
Query: 46 SLPFAKSFFNSLP---ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYP 102
LP F+ + + P + +++T++ A +++ F+ ++R GL P+ +TY
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 103 FALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR 162
+ A ++ +LS + L+ G+ + T L+ D + A ++F +M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 163 TVV----TWSSMIAAYVGSNSPSEALHVFQEMRLANEKP--------------------- 197
V+ +++++I +V + + AL + E++ KP
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 198 --------------NSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
NS+ +L+ A K N + G + + ++++V L +
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 244 YAKCGLMKKALLVFNSMP-----EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKP 298
K L+ KA+ FN + + N FT MI L + +LF QM GL P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 299 DGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
D +++ ++ G V E D+M + +K + Y +V L+ +Q+A
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEI-GMKLDLLAYTSLVWGLSHCNQLQKARSF 705
Query: 359 IKNMPME---PNAVILRSFLGACRNQGSVPSLDDKLMSKLESELGANYVLTAN 408
++ M E P+ V+ S L + + +D+ + +L+S L + +LT++
Sbjct: 706 LEEMIGEGIHPDEVLCISVL---KKHYELGCIDEAV--ELQSYLMKHQLLTSD 753
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 49/308 (15%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLV-FFRRLQRSGLSPDNFTYPFALKACARVSSLSHG 117
I+P + +NT+I A A E L+ F ++ G+ PD TY L ACA + L
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA-IRGLGDE 265
Query: 118 G--VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA----VRTVVTWSSMI 171
VF ++ G+ D T + L++ + + + EMA + + +++ ++
Sbjct: 266 AEMVFRTMN-DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLL 324
Query: 172 AAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVD 231
AY S S EA+ VF +M+ A PN+ T LL+
Sbjct: 325 EAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN------------------------ 360
Query: 232 MSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISL 287
++ + G +F M N ++ I+I G G K+V++L
Sbjct: 361 -----------LFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 288 FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
F M + ++PD ++ I+ AC GL ++ + M +I PS + Y +++
Sbjct: 410 FHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT-ANDIVPSSKAYTGVIEAFG 468
Query: 348 RAGLIQEA 355
+A L +EA
Sbjct: 469 QAALYEEA 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 131/337 (38%), Gaps = 56/337 (16%)
Query: 80 LESLVFFRRLQR----------SGLSPDNFTYPFALKACARVSSLSHG-GVFHSLTLKTG 128
+E+ RRL++ G PD +Y L+A A+ S+ GVFH + G
Sbjct: 289 VETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ-AAG 347
Query: 129 LSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVGSNSPSEAL 184
+ + T + LL + G RQ+F EM T++ +I + E +
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVV 407
Query: 185 HVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMY 244
+F +M N +P+ T ++ AC K I Y+T N + S + T + E +
Sbjct: 408 TLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAF 467
Query: 245 AKCGLMKKALLVFNSMPE---------------------------------------KNL 265
+ L ++AL+ FN+M E +N
Sbjct: 468 GQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
+F I A G ++ + + ME PD + +LS S LVDE + F+
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEE 587
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
M + +I PS+ Y M+ + + + ++++ M
Sbjct: 588 M-KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQMED 293
T + + + GL+ K L VF+ MP + + S+T +I+A G +G + + L +M++
Sbjct: 145 TIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN 204
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
+ P L+++ +++AC+ GL EG + +R I+P + Y ++ A GL
Sbjct: 205 EKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGD 264
Query: 354 EAYDIIKNM 362
EA + + M
Sbjct: 265 EAEMVFRTM 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 240 LFEMYAKCGLMKKALLVFNSMPEK-----NLQSFTIMISALGNHGCQKDVISLFTQMEDM 294
+F+ +A G +++L +F M + N +TIMIS LG G + +F +M
Sbjct: 111 VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQ 170
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
G+ S++ +++A G + DRM + I PS+ Y +++ AR GL E
Sbjct: 171 GVSRSVFSYTALINAYGRNGRYETSLELLDRM-KNEKISPSILTYNTVINACARGGLDWE 229
Query: 355 A----YDIIKNMPMEPNAVILRSFLGACRNQG 382
+ +++ ++P+ V + L AC +G
Sbjct: 230 GLLGLFAEMRHEGIQPDIVTYNTLLSACAIRG 261
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 148/338 (43%), Gaps = 41/338 (12%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P + +NTII L ++L F+ ++ G+ P+ TY + S
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
S ++ ++ D +T + L+ + G + A +++DEM R ++VT+SS+I +
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ EA +F+ M + P+ VT +L+ K V
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY-------------------KRV 412
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQMEDM 294
E G +F ++ GL+ N ++ I+I L G +F +M
Sbjct: 413 EEGMEVFREMSQRGLV------------GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 295 GLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQE 354
G+ P+ ++++ +L G +++ + F+ + R ++P++ Y M++ + +AG +++
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVED 519
Query: 355 AYDIIKNMPM---EPNAVILRSFL-GACRNQGSVPSLD 388
+D+ N+ + +P+ V + + G CR +GS D
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCR-KGSKEEAD 556
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 8/259 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P +F ++ +I A +E+ + + + + P TY + L
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
+ D T NTL+K + + +VF EM+ R VT++ +I
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ A +F+EM PN +T +LL K + + Y+ R+ ++ ++
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQ 290
+ E K G ++ +F ++ K ++ ++ MIS G +++ +LF +
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 291 MEDMGLKPDGLSFSVILSA 309
M++ G P+ ++ ++ A
Sbjct: 562 MKEDGTLPNSGCYNTLIRA 580
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 27/272 (9%)
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKM----VNVSAGESIHSY-ITRNHVDMSVE 235
+A+ +F EM + P+ + LLSA +KM V +S GE + + I NH S+
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI- 121
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQM 291
L + + + AL V M + + + +S+L N C + ++L QM
Sbjct: 122 ----LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
G +P+ ++F+ ++ E DRMV +P + YG +V+ L + G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLCKRGD 236
Query: 352 IQEAYDIIKNM---PMEPNAVILRSFL-GACRNQGSVPSLDDKLMSKLESELGANYVLTA 407
A++++ M +EP +I + + G C+ + +L+ L ++E++ V+T
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN--LFKEMETKGIRPNVVTY 294
Query: 408 NVFSTC----ASWKDASNLRLAMKQKGLKKNP 435
+ +C W DAS L M ++ K NP
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIER--KINP 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 137/336 (40%), Gaps = 13/336 (3%)
Query: 57 LPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH 116
L P + ++++ +S E++ ++ +G P+ T+ + + S
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIA 172
+ G D T ++ G A + ++M V+ ++++I
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+AL++F+EM +PN VT SL+S S + S + ++
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
V +AL + + K G + +A +++ M ++++ + S+L N C D + QM
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 293 DMGLK----PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+ + PD ++++ ++ V+EG F M + + +V Y ++ L +
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT-YNILIQGLFQ 443
Query: 349 AGLIQEAYDIIKNMPME---PNAVILRSFL-GACRN 380
AG A +I K M + PN + + L G C+N
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 129/299 (43%), Gaps = 17/299 (5%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + + T++R E+L F R+ + GL PD Y + A + + G
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIAAY 174
L + +S+D N ++ C I A + F+ + +VT+++MI Y
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
EA +F+ +++ PN+VTL L+ K ++ + S + +
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQ 290
L + ++K ++ + +F M EK + S++I+I L G + ++F Q
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
D L PD +++++++ +G + E + ++ M+R +KP DLL RA
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR-NGVKPD--------DLLQRA 816
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 124/297 (41%), Gaps = 9/297 (3%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGV 119
P + + T+I + F+ +++ G+ PD Y + + L G
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV 175
S L G+ D ++ + Y G + A V+ M + VVT++ +I
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
EA ++ ++ +P+ VT SL+ K N+ +G +++ + + V
Sbjct: 403 QDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVV 462
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQM 291
+ L + +K GLM A+ M ++++ ++ ++L + C+ + + +F M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
G+KPD +F+ ++ G ++E F RM +M ++P Y ++D +
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLIDAFCK 578
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 146/346 (42%), Gaps = 19/346 (5%)
Query: 93 GLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFA 152
G +P+ T+ + + + + + G+ D +TL+ Y G +G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 153 RQVFDEMAVR----TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSA 208
++F + + VV +SS I YV S + A V++ M PN VT L+
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 209 CSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPE----KN 264
+ + ++ I + ++ S+ ++L + + KCG ++ ++ M + +
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 265 LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFD 324
+ + +++ L G + +M ++ + + F+ ++ + DE F
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF- 519
Query: 325 RMVRMYNIKPSVEHYGCMVDLLARAGLIQEA----YDIIKNMPMEPNAVILRSFLGA-CR 379
R++ +Y IKP V + ++ + G ++EA + + K M +EP+A+ + + A C+
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFCK 578
Query: 380 NQGSVPSL---DDKLMSKLESELGANYVLTANVFSTCASWKDASNL 422
+ L D +K+ +++ V+ +F C +DAS
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK-CHRIEDASKF 623
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/343 (16%), Positives = 128/343 (37%), Gaps = 44/343 (12%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P + ++++I + + + G PD Y + ++ + H
Sbjct: 422 MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
F L + + N+L+ + A +VF M + V T+++++
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ EAL +F M +P+++ +L+ A K + + G + + RN + +
Sbjct: 542 IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADI 601
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ---------------------------- 266
+ + + KC ++ A FN++ E ++
Sbjct: 602 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL 661
Query: 267 -----------SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGL 315
+ TI+I L + I +F+ M + G KP+ +++ ++ S
Sbjct: 662 LKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 721
Query: 316 VDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI 358
++ F+ M + I PS+ Y ++D L + G + EA +I
Sbjct: 722 IEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 151/372 (40%), Gaps = 55/372 (14%)
Query: 84 VFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFY 143
V ++R+ G+SP+ TY +K GL D + Y
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIK---------------------GLCQDG-------RIY 408
Query: 144 ADCGAIGFARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLV 203
A G Q+ ++VT+SS+I + + ++++M P+ V
Sbjct: 409 E---AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 204 SLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP-- 261
L+ SK + + + ++V + +L + + + +AL VF M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 262 --EKNLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA-CSHMGLVDE 318
+ ++ +FT ++ G ++ + LF +M MGL+PD L++ ++ A C HM
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT-I 584
Query: 319 GKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSFL 375
G FD M R I + ++ LL + I++A N+ MEP+ V + +
Sbjct: 585 GLQLFDLMQR-NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 376 -GACRNQGSVPSLD--DKLMSKLE-SELGANYV-LTANVFSTCASWKDASNLRL--AMKQ 428
G C S+ LD +++ L+ + G N V LT + C + +R+ M +
Sbjct: 644 CGYC----SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Query: 429 KGLKKNP---GC 437
KG K N GC
Sbjct: 700 KGSKPNAVTYGC 711
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 145/327 (44%), Gaps = 12/327 (3%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGV 119
TP + +++T++ + ++R GL P+++ Y + R+ L+
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV 175
S ++ G+ D TL+ + G I A + F EM R V+T++++I+ +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
EA +F EM +P+SVT L++ K ++ +H+++ + +V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQM 291
T L + K G + A + + M + LQ ++ +++ L G ++ + L +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
E GL D ++++ ++ A G +D+ + M+ ++P++ + +++ G+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 352 IQEAYDIIKNM---PMEPNAVILRSFL 375
+++ ++ M + PNA S +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 123/314 (39%), Gaps = 13/314 (4%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + T+I + FF + ++PD TY + ++ + G
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 119 -VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAA 173
+FH + K GL D T L+ Y G + A +V + M VVT++++I
Sbjct: 407 KLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
A + EM +PN T S+++ K N+ + ++
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFT 289
T L + Y K G M KA + M K LQ +F ++++ HG +D L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 290 QMEDMGLKPDGLSF-SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M G+ P+ +F S++ C L +Y D R + P + Y +V +
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR--GVGPDGKTYENLVKGHCK 643
Query: 349 AGLIQEAYDIIKNM 362
A ++EA+ + + M
Sbjct: 644 ARNMKEAWFLFQEM 657
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/327 (19%), Positives = 145/327 (44%), Gaps = 12/327 (3%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGV 119
TP + +++T++ + ++R GL P+++ Y + R+ L+
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV 175
S ++ G+ D TL+ + G I A + F EM R V+T++++I+ +
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
EA +F EM +P+SVT L++ K ++ +H+++ + +V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQM 291
T L + K G + A + + M + LQ ++ +++ L G ++ + L +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
E GL D ++++ ++ A G +D+ + M+ ++P++ + +++ G+
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 352 IQEAYDIIKNM---PMEPNAVILRSFL 375
+++ ++ M + PNA S +
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 123/314 (39%), Gaps = 13/314 (4%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I P + T+I + FF + ++PD TY + ++ + G
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406
Query: 119 -VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAA 173
+FH + K GL D T L+ Y G + A +V + M VVT++++I
Sbjct: 407 KLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
A + EM +PN T S+++ K N+ + ++
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFT 289
T L + Y K G M KA + M K LQ +F ++++ HG +D L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 290 QMEDMGLKPDGLSF-SVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
M G+ P+ +F S++ C L +Y D R + P + Y +V +
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR--GVGPDGKTYENLVKGHCK 643
Query: 349 AGLIQEAYDIIKNM 362
A ++EA+ + + M
Sbjct: 644 ARNMKEAWFLFQEM 657
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 125/292 (42%), Gaps = 11/292 (3%)
Query: 46 SLPFAKSFFNSLP---ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYP 102
S A S FN + I + ++++I L N + R + + PD T+
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 103 FALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR 162
+ + L ++ + G++ D T N+L+ + + A Q+FD M +
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 163 ----TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAG 218
+VT+S +I +Y + + + +F+E+ PN++T +L+ + ++A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 219 ESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISA 274
+ + + V SV L + G + KAL +F M + + + I+I
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 275 LGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRM 326
+ N D SLF + D G+KPD ++++V++ G + E M F +M
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 13/312 (4%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY-PFALKACARVSSLSHGGV 119
P L +T+I L E+LV R+ G PD TY P + C +S +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV 175
F + + + + + ++ G+ A +F+EM ++ VVT+SS+I
Sbjct: 233 FRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN-VSAGESIHSYITRNHVDMSV 234
+ + +EM N P+ VT +L+ K + A E + ITR ++
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQ 290
+L + + K + +A +F+ M K + + S L N C+ D + LF +
Sbjct: 352 TY-NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
+ GL P+ ++++ ++ G ++ K F MV + PSV YG ++D L G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNG 469
Query: 351 LIQEAYDIIKNM 362
+ +A +I + M
Sbjct: 470 ELNKALEIFEKM 481
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 160/403 (39%), Gaps = 51/403 (12%)
Query: 46 SLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFAL 105
++ +S S P+ P+ +N + A+A + L F + ++ +G+ D +T +
Sbjct: 54 AIDLFESMIQSRPLPTPI-DFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 106 KACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD---EMAVR 162
R L K G D T +TL+ + G + A + D EM R
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 163 -TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
+VT S++I SEAL + M +P+ VT +L+ K N
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN------- 225
Query: 222 HSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQS----FTIMISALGN 277
+AL AL +F M E+N+++ ++I+I +L
Sbjct: 226 ----------------SAL------------ALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 278 HGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVE 337
G D +SLF +ME G+K D +++S ++ + G D+G M+ NI P V
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG-RNIIPDVV 316
Query: 338 HYGCMVDLLARAGLIQEAYDIIKNM---PMEPNAVILRSFL-GACRNQ--GSVPSLDDKL 391
+ ++D+ + G + EA ++ M + P+ + S + G C+ + D +
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 392 MSKLESELGANYVLTANVFSTCASWKDASNLRLAMKQKGLKKN 434
+SK Y + N + D L + KGL N
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPN 419
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 44/274 (16%)
Query: 50 AKSFFNSL---PITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
AK +N + I P +N++I E+ F + G PD TY +
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 107 ACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR--- 162
+ + + G +F ++ K GL + T NTL+ + G + A+++F EM R
Sbjct: 394 SYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 163 -TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESI 221
+VVT+ ++ + ++AL +F++M+ + ++ G I
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKS--------------------RMTLGIGI 492
Query: 222 HSYITRNHVDMS-VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGC 280
++ I + S V+ +LF C L K + + ++ ++ +MI L G
Sbjct: 493 YNIIIHGMCNASKVDDAWSLF-----CSLSDKGV-------KPDVVTYNVMIGGLCKKGS 540
Query: 281 QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMG 314
+ LF +M++ G PD ++++++ A H+G
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRA--HLG 572
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 125/313 (39%), Gaps = 12/313 (3%)
Query: 60 TPPLFAWNTIIRALANSPTPLESLV-FFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+P L +N I+ ++ ++ GL D FT L ACAR L
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAY 174
F + G T N LL+ + G A V EM + VT++ ++AAY
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
V + EA V + M PN++T +++ A K + + +
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNT 421
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQ 290
A+ + K + + + M N ++ M++ GN G K V +F +
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE 481
Query: 291 MEDMGLKPDGLSFSVILSACSHMG-LVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARA 349
M+ G +PD +F+ ++SA G VD KMY + +N V Y +++ LAR
Sbjct: 482 MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFN--ACVTTYNALLNALARK 539
Query: 350 GLIQEAYDIIKNM 362
G + ++I +M
Sbjct: 540 GDWRSGENVISDM 552
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 157/396 (39%), Gaps = 44/396 (11%)
Query: 50 AKSFFNSLPITPPLF---AWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
A + +P+ L A+ TI+ A + + +++ F R++ G SP TY L
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 107 ACARVSSLSHG--GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAV--- 161
++ GV + K GL D +T +T+L A G + A++ F E+
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSK-GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 162 -RTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGES 220
VT+++++ + + +EAL V +EM + +SVT L++A +
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 221 IHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALG 276
+ +T+ V + T + + Y K G +AL +F SM E N ++ ++S LG
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 277 NHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSV 336
++I + M+ G P+ +++ +L+ C + G+ F R ++ +P
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF-REMKSCGFEPDR 491
Query: 337 EHYGCMVDLLARAGLIQEAYDIIKNMPMEPNAVILRSFLGACRNQGSVPSLDDKLMSKLE 396
+ + ++ R G +A + M R+ AC
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMT--------RAGFNACV----------------- 526
Query: 397 SELGANYVLTANVFSTCASWKDASNLRLAMKQKGLK 432
Y N + W+ N+ MK KG K
Sbjct: 527 ----TTYNALLNALARKGDWRSGENVISDMKSKGFK 558
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 21/316 (6%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +NT+I A + +++ + + R+G + TY L A AR G
Sbjct: 489 PDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENV 548
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGA-IGFAR--------QVFDE-MAVRTVVTWSSM 170
S G + + +L+ YA G +G R Q+F M +RT++ +
Sbjct: 549 ISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFK 608
Query: 171 IAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
A GS F + KP+ V S+LS ++ E I I + +
Sbjct: 609 CRALAGSE------RAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGL 662
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVIS 286
+ +L +MY + G KA + ++ + L+ S+ +I G ++ +
Sbjct: 663 SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVR 722
Query: 287 LFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
+ ++M + G++P +++ +S + MG+ E + + M + + +P+ + +VD
Sbjct: 723 MLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK-NDCRPNELTFKMVVDGY 781
Query: 347 ARAGLIQEAYDIIKNM 362
RAG EA D + +
Sbjct: 782 CRAGKYSEAMDFVSKI 797
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 14/332 (4%)
Query: 43 STISLPFAKSFFNSL---PITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNF 99
S ++ FA++ F + ++P +F +N +IR + +L F +++ G P+
Sbjct: 182 SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVV 241
Query: 100 TYPFALKACARVSSLSHG-GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDE 158
TY + ++ + G + S+ LK GL + + N ++ G + V E
Sbjct: 242 TYNTLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 159 MAVRTV----VTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVN 214
M R VT++++I Y + +AL + EM P+ +T SL+ + K N
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 215 VSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISA 274
++ + + + T L + +++ G M +A V M + + +A
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 275 LGNHGC----QKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMY 330
L N C +D I++ M++ GL PD +S+S +LS VDE MV
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK- 479
Query: 331 NIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
IKP Y ++ +EA D+ + M
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 156/365 (42%), Gaps = 27/365 (7%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+TP + + ++I ++ + ++ F +++ GL P+ TY + ++ ++
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAY 174
G S T N L+ + G + A V ++M + VV++S++++ +
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
S EAL V +EM KP+++T SL+ + ++ + R +
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQ 290
TAL Y G ++KAL + N M EK ++ +++++I+ L ++ L +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 291 MEDMGLKPDGLSFSVILSACSHM---------------GLVDEGKMYFDRMVRMYNIKPS 335
+ P +++ ++ CS++ G++ E F+ M+ N KP
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK-NHKPD 639
Query: 336 VEHYGCMVDLLARAGLIQEAYDIIKNMPMEP---NAVILRSFLGACRNQGSVPSLDDKLM 392
Y M+ RAG I++AY + K M + V + + + A +G V L+ ++
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 393 SKLES 397
L S
Sbjct: 700 HVLRS 704
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 140/333 (42%), Gaps = 12/333 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P L ++N +I L E + R G S D TY +K + +
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTVV----TWSSMIAAY 174
V H+ L+ GL+ T +L+ G + A + D+M VR + T+++++ +
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+EA V +EM P+ VT +L++ + ++ + + V
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQ 290
+ + + + + +AL V M EK ++ TI S+L C+ K+ L+ +
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
M +GL PD +++ +++A G +++ + MV + P V Y +++ L +
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQS 569
Query: 351 LIQEAYDIIKNMPME---PNAVILRSFLGACRN 380
+EA ++ + E P+ V + + C N
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 126/310 (40%), Gaps = 9/310 (2%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +NT+I + R + GL P+ +Y + R +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVG 176
+ + G S D T NTL+K Y G A + EM +V+T++S+I +
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ + + A+ +MR+ PN T +L+ S+ ++ + + N SV
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQME 292
AL + G M+ A+ V M EK L S++ ++S + + + +M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLI 352
+ G+KPD +++S ++ E ++ M+R+ + P Y +++ G +
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV-GLPPDEFTYTALINAYCMEGDL 536
Query: 353 QEAYDIIKNM 362
++A + M
Sbjct: 537 EKALQLHNEM 546
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 139/309 (44%), Gaps = 12/309 (3%)
Query: 64 FAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACAR--VSSLSHGGVFH 121
+ + +I A A +++ F R++ PD FTY L+ R V + V++
Sbjct: 128 YCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYN 187
Query: 122 SLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVGS 177
+ LK S + YT L+ G A+++FD+M R + VT++ +I+
Sbjct: 188 EM-LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQR 246
Query: 178 NSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELG 237
S +A +F EM+ + P+SV +LL K+ + + ++ + +
Sbjct: 247 GSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGY 306
Query: 238 TALFEMYAKCGLMKKALLVFNSMPEKNLQS----FTIMISALGNHGCQKDVISLFTQMED 293
++L + + +A ++ +M +KN++ +TI+I L G +D + L + M
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 294 MGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQ 353
G+ PD ++ ++ A GL++EG+ M + + H ++ + R GL++
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH-TILICSMCRNGLVR 425
Query: 354 EAYDIIKNM 362
EA +I +
Sbjct: 426 EAEEIFTEI 434
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 118/310 (38%), Gaps = 13/310 (4%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P A N ++ +E+ R ++ G Y + R +
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVG 176
++ LK + D L++ + G I A ++ M + + ++++I A G
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCG 385
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
E + EM P++ T L+ + + V E I + I ++ SV
Sbjct: 386 RGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVAT 445
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS--------LF 288
AL + K G +K+A L+ + M S + +S GN V S
Sbjct: 446 FNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDL 505
Query: 289 TQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
D G PD +S++V+++ G +D G + ++++ + P Y +++ L R
Sbjct: 506 AHFADTGSSPDIVSYNVLINGFCRAGDID-GALKLLNVLQLKGLSPDSVTYNTLINGLHR 564
Query: 349 AGLIQEAYDI 358
G +EA+ +
Sbjct: 565 VGREEEAFKL 574
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 139/314 (44%), Gaps = 11/314 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + A+N II +L + ++ FF+ ++R G+ P+ TY + S S
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIAAYVG 176
S +K ++ + T + LL + G + A+++F+EM + +VT+SS+I
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYIT-RNHVDMSVE 235
+ EA +F M + V+ +L++ K V G + ++ R V +V
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT 367
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMP----EKNLQSFTIMISALGNHGCQKDVISLFTQM 291
T L + + + G + KA F+ M ++ ++ I++ L ++G + + +F M
Sbjct: 368 YNT-LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
+ + D ++++ ++ G V+E F + + +KP + Y M+ L GL
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLKPDIVTYTTMMSGLCTKGL 485
Query: 352 IQEAYDIIKNMPME 365
+ E + M E
Sbjct: 486 LHEVEALYTKMKQE 499
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 8/255 (3%)
Query: 58 PITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG 117
ITP + ++ ++ A + LE+ F + R + PD TY + +
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 118 GVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAA 173
L + G +D + NTL+ + + ++F EM+ R VT++++I
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
+ + +A F +M P+ T LL + I + + +D+
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFT 289
+ T + K G +++A +F S+ K L+ ++T M+S L G +V +L+T
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Query: 290 QMEDMGLKPDGLSFS 304
+M+ GL + + S
Sbjct: 495 KMKQEGLMKNDCTLS 509
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 128 GLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVGSNSPSEA 183
G+ +D YT N ++ + C + A + +M VT S++ + N S+A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
+ + +M KP+ V +++ + K V+ I R + +V TAL
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 244 YAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPD 299
A + + M +K N+ +++ ++ A +G + LF +M M + PD
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII 359
+++S +++ +DE FD MV + V Y +++ +A +++ +
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL-ADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 360 KNM 362
+ M
Sbjct: 354 REM 356
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 122/270 (45%), Gaps = 22/270 (8%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I+P + ++ +I + E+ + + + G++P+ TY + + + L
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAY 174
L + G D T N L+ Y I ++F EM++R V VT+++++ +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
S A +FQEM +P+ V+ LL + I I ++ M +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK--MEL 506
Query: 235 ELGTALFEMYAKCGLMK--KALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVIS-- 286
++G + ++ C K A +F S+P K ++ ++ IMIS L C+KD +S
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL----CRKDSLSKA 562
Query: 287 --LFTQMEDMGLKPDGLSFSVILSACSHMG 314
LF +M + G PD L++++++ A H+G
Sbjct: 563 DILFRKMTEEGHAPDELTYNILIRA--HLG 590
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/323 (18%), Positives = 134/323 (41%), Gaps = 11/323 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG-GV 119
P + ++ + S ++ R+++ + D Y + + SL + +
Sbjct: 226 PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNL 285
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV 175
F+ + +K G +D T NTL+ + + G ++ +M R VVT+S +I ++V
Sbjct: 286 FNEMEIK-GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
EA + +EM PN++T SL+ K + + + D +
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVIS----LFTQM 291
L Y K + L +F M + + + T+ + L CQ + LF +M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGL 351
++PD +S+ ++L G +++ F + + ++ + Y ++ + A
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASK 523
Query: 352 IQEAYDIIKNMPMEPNAVILRSF 374
+ +A+D+ ++P++ + R++
Sbjct: 524 VDDAWDLFCSLPLKGVKLDARAY 546
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 133/314 (42%), Gaps = 30/314 (9%)
Query: 79 PLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNT 138
PL +++ F RL S ++ Y L C ++ S G+ HS+ YT +
Sbjct: 84 PLPTVIDFNRL-FSAIAKTK-QYELVLALCKQMES---KGIAHSI----------YTLSI 128
Query: 139 LLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVGSNSPSEALHVFQEMRLAN 194
++ + C + +A ++ V +++++ SEAL + M
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 195 EKPNSVTLVSLLSACSKMVNVS-AGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKA 253
KP +TL +L++ VS A I + V G L M K G A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM-CKSGQTALA 247
Query: 254 LLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSA 309
+ + M E+N++ ++I+I L G + +LF +ME G K D ++++ ++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 310 CSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM---PMEP 366
+ G D+G M++ I P+V + ++D + G ++EA ++K M + P
Sbjct: 308 FCNAGRWDDGAKLLRDMIK-RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 367 NAVILRSFL-GACR 379
N + S + G C+
Sbjct: 367 NTITYNSLIDGFCK 380
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 135/321 (42%), Gaps = 12/321 (3%)
Query: 68 TIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKT 127
+II ALA+S LE+ F L++SG+ P Y LK + L S K
Sbjct: 309 SIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 128 GLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVGSNSPSEA 183
G+S D +T + L+ Y + G AR V EM V +S ++A + +
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 184 LHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEM 243
V +EM+ KP+ ++ K + + + ++ L +
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Query: 244 YAKCGLMKKALLVFNSMPEKN----LQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPD 299
+ K G A +F +M + ++ IMI++ G+ D+ L +M+ G+ P+
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII 359
++ + ++ G ++ + M + +KPS Y +++ A+ GL ++A +
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEM-KSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 360 KNMP---MEPNAVILRSFLGA 377
+ M ++P+ + L S + A
Sbjct: 608 RVMTSDGLKPSLLALNSLINA 628
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 170/417 (40%), Gaps = 21/417 (5%)
Query: 34 LISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSG 93
L+ L+ A S ++F S T +N +I A A + ++L ++++ G
Sbjct: 168 LLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDG 227
Query: 94 LSPDNFTYPFALKACARVSSLSHGGVF--HSLTLKTGLSSDCYTDNTLLKFYADCGAIGF 151
D Y +++ R + + + + + L D N ++ +A G
Sbjct: 228 YQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSK 287
Query: 152 ARQVFDEMAVRT-----VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLL 206
A Q+ MA T T S+I+A S EA +F+E+R + KP + +LL
Sbjct: 288 ALQLLG-MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 207 SACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ 266
K + ES+ S + + V + L + Y G + A +V M ++Q
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 267 S----FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMY 322
F+ +++ + G + + +M+ +G+KPD ++V++ +D
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 323 FDRMVRMYNIKPSVEHYGCMVDLLARAG---LIQEAYDIIKNMPMEPNAVILRSFLGACR 379
FDRM+ I+P + ++D + G + +E ++ ++ P A + +
Sbjct: 467 FDRMLSE-GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 525
Query: 380 NQGSVPSLDDKLMSKLESELGANYVLT----ANVFSTCASWKDASNLRLAMKQKGLK 432
+Q + +L+ K++S+ V+T +V+ + DA MK GLK
Sbjct: 526 DQERWDDM-KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 8/266 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + + ++ A A ++ F +LQ GL PD + Y +++ +R
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA----VRTVVTWSSMIAAYVG 176
SL G D + N ++ Y G A VF+EM T+ + +++AY
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ ++ + +EM +P++ L S+L+ ++ + E I + + +
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQME 292
L +Y K G +++ +F + EKN + ++T I A + +F +M
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDE 318
D G PDG + V+LSACS V++
Sbjct: 559 DSGCAPDGGTAKVLLSACSSEEQVEQ 584
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +N +I + S + ++ P+ TY + A AR
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVG 176
+ GL D Y N L++ Y+ G A ++F M +++ M+ AY
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ S+A VF+EM+ P + + LLSA SK +V+ E+I ++ N V+ +
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 237 GTALFEMYAKCGL---MKKALLVFNSMP-EKNLQSFTIMISALGNHGCQKDVISLFTQME 292
++ +Y + G M+K L + P ++ ++ I+I+ G G + + LF +++
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
+ +PD ++++ + A S L + F+ M+
Sbjct: 524 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
Query: 57 LPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH 116
L I P + + ++ A + + + + + +G+ PD F L R+ +
Sbjct: 420 LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK 479
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIA 172
+ ++D T N L+ Y G + ++F E+ + VVTW+S I
Sbjct: 480 MEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIG 539
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
AY + L VF+EM + P+ T LLSACS V E + S + H +
Sbjct: 540 AYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV---EQVTSVLRTMHKGV 596
Query: 233 SV 234
+V
Sbjct: 597 TV 598
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
Q+ + V T T++ +I AY + A V EM+ + P ++ + + ++
Sbjct: 202 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 261
Query: 214 ----NVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP----EKNL 265
N + + R+ + E + +Y K + ++ M + N+
Sbjct: 262 KRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 321
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
++T +++A G + +F Q+++ GL+PD ++ ++ + S G F
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
M M +P Y MVD RAGL +A + + M
Sbjct: 382 MQHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 417
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 8/266 (3%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + + ++ A A ++ F +LQ GL PD + Y +++ +R
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA----VRTVVTWSSMIAAYVG 176
SL G D + N ++ Y G A VF+EM T+ + +++AY
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ ++ + +EM +P++ L S+L+ ++ + E I + + +
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFTQME 292
L +Y K G +++ +F + EKN + ++T I A + +F +M
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDE 318
D G PDG + V+LSACS V++
Sbjct: 537 DSGCAPDGGTAKVLLSACSSEEQVEQ 562
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P +N +I + S + ++ P+ TY + A AR
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAYVG 176
+ GL D Y N L++ Y+ G A ++F M +++ M+ AY
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
+ S+A VF+EM+ P + + LLSA SK +V+ E+I ++ N V+ +
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 237 GTALFEMYAKCGL---MKKALLVFNSMP-EKNLQSFTIMISALGNHGCQKDVISLFTQME 292
++ +Y + G M+K L + P ++ ++ I+I+ G G + + LF +++
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
+ +PD ++++ + A S L + F+ M+
Sbjct: 502 EKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
Query: 57 LPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH 116
L I P + + ++ A + + + + + +G+ PD F L R+ +
Sbjct: 398 LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTK 457
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIA 172
+ ++D T N L+ Y G + ++F E+ + VVTW+S I
Sbjct: 458 MEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIG 517
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
AY + L VF+EM + P+ T LLSACS V E + S + H +
Sbjct: 518 AYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV---EQVTSVLRTMHKGV 574
Query: 233 SV 234
+V
Sbjct: 575 TV 576
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
Query: 154 QVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMV 213
Q+ + V T T++ +I AY + A V EM+ + P ++ + + ++
Sbjct: 180 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 239
Query: 214 ----NVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMP----EKNL 265
N + + R+ + E + +Y K + ++ M + N+
Sbjct: 240 KRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 299
Query: 266 QSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDR 325
++T +++A G + +F Q+++ GL+PD ++ ++ + S G F
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 359
Query: 326 MVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
M M +P Y MVD RAGL +A + + M
Sbjct: 360 MQHM-GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 395
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 143/336 (42%), Gaps = 12/336 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + +NTII +L ++L F+ ++ G+ P+ TY + S
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRTV----VTWSSMIAAY 174
S ++ ++ + T N L+ + G A +++D+M R++ T++S++ +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 175 VGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSV 234
+ +A +F+ M + P+ VT +L+ K V G + ++ +
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 235 ELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQ 290
T L + G A VF M ++ +++I++ L N+G + + +F
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 291 MEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAG 350
M+ +K D ++ ++ G VD+G F + + +KP+V Y M+ L
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SLKGVKPNVVTYNTMISGLCSKR 554
Query: 351 LIQEAYDIIKNMPME---PNAVILRSFLGACRNQGS 383
L+QEAY ++K M + PN+ + + A G
Sbjct: 555 LLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 143/336 (42%), Gaps = 19/336 (5%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVF 120
P + +N ++ A+A + ++QR + +TY + R S +S
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 121 HSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFD---EMAVR-TVVTWSSMIAAYVG 176
+K G T ++LL Y I A + D EM R +T++++I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 177 SNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVEL 236
N SEA+ + M +PN VT +++ K + ++ + + ++ V +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 237 GTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISLFTQME 292
+ + K + AL +F M K N+ +++ +IS L ++G D L + M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 293 DMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYG------CMVDLL 346
+ + P+ ++F+ ++ A G E + +D M++ +I P + Y CM D L
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRL 381
Query: 347 ARAGLIQEAYDIIKNMPMEPNAVILRSFL-GACRNQ 381
+A ++ ++ + + P+ V + + G C+++
Sbjct: 382 DKA---KQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 15/266 (5%)
Query: 181 SEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTAL 240
+A+ +F M + P+ V LLSA +KM S+ + R + + L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 241 FEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQ----KDVISLFTQMEDMGL 296
+ + + AL + M + + + +S+L N C D ++L QM +MG
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 297 KPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAY 356
+PD ++F+ ++ E DRMV+ +P++ YG +V+ L + G A
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 357 DIIKNMP---MEPNAVILRSFLGA-CRNQGSVPSLDDKLMSKLESELGANYVLTANVFST 412
+++ M +E + VI + + + C+ + +L+ L ++E++ V+T + +
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN--LFKEMETKGIRPNVVTYSSLIS 303
Query: 413 C----ASWKDASNLRLAMKQKGLKKN 434
C W DAS L M +K + N
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPN 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 155/393 (39%), Gaps = 17/393 (4%)
Query: 57 LPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSH 116
L P + ++++ + +++ ++ G PD T+ + + S
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 117 GGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT----VVTWSSMIA 172
++ G + T ++ G A + ++M VV ++++I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 173 AYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDM 232
+ +AL++F+EM +PN VT SL+S S + S + ++
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 233 SVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISLFTQME 292
++ AL + + K G +A +++ M ++++ ++L N C D + QM
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 293 DMGLK----PDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLAR 348
+ + PD ++++ ++ V++G F M + +V Y ++ L
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFH 447
Query: 349 AGLIQEAYDIIKNMPME--PNAVILRSFL--GACRNQGSVPSLDD-KLMSKLESELGANY 403
G A + K M + P ++ S L G C N +L+ M K E +L Y
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI-Y 506
Query: 404 VLTANVFSTCASWK--DASNLRLAMKQKGLKKN 434
+ T + C + K D +L ++ KG+K N
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 155/355 (43%), Gaps = 25/355 (7%)
Query: 61 PPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHG-GV 119
P + +N+I+ + S +L R+++ + D FTY + + R + +
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 120 FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYV 175
F + K G+ S T N+L++ G + +M R V+T++ ++ +V
Sbjct: 251 FKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 176 GSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVE 235
EA +++EM PN +T +L+ +S ++ + RN +
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 236 LGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI----SLFTQM 291
T+L + Y + + VF ++ ++ L + + S L CQ I LF +M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 292 EDMGLKPDGLSFSVILSACSHMGLVDEGKM-----YFDRMVRMYNIKPSVEHYGCMVDLL 346
G+ PD +++ ++L GL D GK+ F+ + + + + Y +++ +
Sbjct: 430 VSHGVLPDVMTYGILLD-----GLCDNGKLEKALEIFEDLQK-SKMDLGIVMYTTIIEGM 483
Query: 347 ARAGLIQEAYDIIKNMP---MEPNAVILRSFLGACRNQGSVPSLDDKLMSKLESE 398
+ G +++A+++ ++P ++PN + + +GS+ S + L+ K+E +
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL-SEANILLRKMEED 537
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 8/262 (3%)
Query: 56 SLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLS 115
S I P + +N ++ E+ ++ + G+SP+ TY + + LS
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 116 HGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMI 171
L ++ S D T +L+K Y + +VF ++ R VT+S ++
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 172 AAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVD 231
+ S A +FQEM P+ +T LL + I + ++ +D
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 232 MSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVISL 287
+ + + T + E K G ++ A +F S+P K N+ ++T+MIS L G + L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 288 FTQMEDMGLKPDGLSFSVILSA 309
+ME+ G P+ +++ ++ A
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRA 552
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 128/312 (41%), Gaps = 18/312 (5%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
I + +N+++R L + + + + + + P+ T+ L + L
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 119 VFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT-----VVTWSSMIAA 173
+ + G+S + T NTL+ Y + A + D M VR +VT++S+I
Sbjct: 319 ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM-VRNKCSPDIVTFTSLIKG 377
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMS 233
Y + + VF+ + N+VT L+ + + E + + + V
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 234 VELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNHGCQKDVISLFT 289
V L + G ++KAL +F + + + +T +I + G +D +LF
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 290 QMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMV------ 343
+ G+KP+ ++++V++S G + E + +M N P+ Y ++
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN-APNDCTYNTLIRAHLRD 556
Query: 344 -DLLARAGLIQE 354
DL A A LI+E
Sbjct: 557 GDLTASAKLIEE 568
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 148/387 (38%), Gaps = 85/387 (21%)
Query: 50 AKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACA 109
A S + + ++P + +NTI+R+L +S +++ R+ + PD TY ++A
Sbjct: 191 ALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 110 RVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVV 165
R S + H A ++ DEM R VV
Sbjct: 251 RDSGVGH-----------------------------------AMKLLDEMRDRGCTPDVV 275
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTL-VSLLSACSKMVNVSAGESIHSY 224
T++ ++ EA+ +M + +PN +T + L S CS + A E + +
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA-EKLLAD 334
Query: 225 ITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ------------------ 266
+ R SV L + GL+ +A+ + MP+ Q
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 267 ---------------------SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSV 305
++ M++AL G +D + + Q+ G P ++++
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 306 ILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEA---YDIIKNM 362
++ + G + D M R ++KP Y +V L+R G + EA + + M
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEM-RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 363 PMEPNAVILRSF-LGACRNQGSVPSLD 388
+ PNAV S LG C+++ + ++D
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAID 540
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 12/277 (4%)
Query: 81 ESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLL 140
+++ +F R+ ++GL PD TY L ++ + + + TG D + L
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 141 KFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEK 196
K + + G R V EM VV +++++ A + P A +F EM A
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 358
Query: 197 PNSVTLVSLLSACSKMVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLV 256
PN TL +L+ K + + M L L M A GL ++A +
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 257 FNSMPEKNLQ------SFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSAC 310
FN M E ++Q S+T M++ G+ G + + LF +M G++ + + + ++
Sbjct: 419 FNDMKE-SVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCL 477
Query: 311 SHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLA 347
+D+ FD ++ +KP GC++ ++A
Sbjct: 478 GKAKRIDDVVYVFDLSIKR-GVKPDDRLCGCLLSVMA 513
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 141/327 (43%), Gaps = 36/327 (11%)
Query: 52 SFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQ----------RSGLSPDNFTY 101
+FFN + + LF TI + ++SL F R+ Q + G+ DN TY
Sbjct: 171 TFFNWVK-SKSLFPMETIFYNVT-----MKSLRFGRQFQLIEEMALEMVKDGVELDNITY 224
Query: 102 PFALKACARVSSLSHGGV-FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMA 160
+ CA+ +L + + + KTGL D T + +L Y+ G + +++
Sbjct: 225 S-TIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYE--- 280
Query: 161 VRTVVT-WS------SMIAAYVGSNSPSEAL-HVFQEMRLANEKPNSVTLVSLLSACSKM 212
R V T W S++ G + + +V QEM+ + KPN V +LL A +
Sbjct: 281 -RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 213 VNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMI 272
S+ + + + + + TAL ++Y K + AL ++ M K I+
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 273 SALGNH----GCQKDVISLFTQM-EDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
+ L N G +++ LF M E + +PD S++ +L+ G ++ F+ M+
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Query: 328 RMYNIKPSVEHYGCMVDLLARAGLIQE 354
+ ++ +V C+V L +A I +
Sbjct: 460 KA-GVQVNVMGCTCLVQCLGKAKRIDD 485
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 119/303 (39%), Gaps = 44/303 (14%)
Query: 96 PDNFTYPFALKACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQV 155
P + + CA +S K G+ + L+ + + AR+
Sbjct: 563 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 622
Query: 156 FDEMAVRTVV----TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
F+ + + +V T++ MI Y N P +A +F++M+ + KP+ VT LL++ +
Sbjct: 623 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 682
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSM----------- 260
+ E+ V V T + Y +KK +F M
Sbjct: 683 LDMKREMEAFD-------VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVT 735
Query: 261 --------PEKNLQS-------------FTIMISALGNHGCQKDVISLFTQMEDMGLKPD 299
PE+NL +T++I G + +F QM + G+ PD
Sbjct: 736 YTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 300 GLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDII 359
++ +++ C MG + E KM FDRM+ +KP V Y ++ R G + +A ++
Sbjct: 796 AAPYTALIACCCKMGYLKEAKMIFDRMIES-GVKPDVVPYTALIAGCCRNGFVLKAVKLV 854
Query: 360 KNM 362
K M
Sbjct: 855 KEM 857
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 137/337 (40%), Gaps = 36/337 (10%)
Query: 49 FAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKAC 108
F ++++ SL P + A N +I + S + FF ++R GL D TY ++A
Sbjct: 169 FFRAYY-SLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQAL 227
Query: 109 AR---------------VSSLSHGGVFHSLTLKTGLSSDCYTDNT--LLKFYADCGAIGF 151
R +S + VF+ L GL + TD LL+ D
Sbjct: 228 WRNDDKEELEKLLSRLLISETRNPCVFY-LNFIEGLCLNQMTDIAYFLLQPLRD------ 280
Query: 152 ARQVFDEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSK 211
A + D+ + + + ++ +A V +M P+ +++ K
Sbjct: 281 ANILVDKSDLG--IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRK 338
Query: 212 MVNVSAGESIHSYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----S 267
+N+ + + + + ++ + +++ + Y + G +A +F E N+
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC 398
Query: 268 FTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMV 327
+ + ALG G ++ I LF +M G+ PD ++++ ++ C G + FD M+
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDA---FDLMI 455
Query: 328 RMYNI--KPSVEHYGCMVDLLARAGLIQEAYDIIKNM 362
M P + Y + LA GL QEA++ +K M
Sbjct: 456 EMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 25/268 (9%)
Query: 50 AKSFFNSL---PITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALK 106
A+ FF L I P LF + +I P ++ F ++R + PD TY L
Sbjct: 619 AREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Query: 107 ACARVSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVRT--- 163
+ + F + D ++ Y + +F +M R
Sbjct: 679 SDPELDMKREMEAFDVI-------PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVP 731
Query: 164 -VVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIH 222
VVT++ ++ N P L +EM+ + KP+ L+ K+ ++ + I
Sbjct: 732 DVVTYTVLL-----KNKPERNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIF 784
Query: 223 SYITRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQ----SFTIMISALGNH 278
+ + VD TAL K G +K+A ++F+ M E ++ +T +I+ +
Sbjct: 785 DQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRN 844
Query: 279 GCQKDVISLFTQMEDMGLKPDGLSFSVI 306
G + L +M + G+KP S S +
Sbjct: 845 GFVLKAVKLVKEMLEKGIKPTKASLSAV 872
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 18/315 (5%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTY----PFALKACARVSSL 114
I P L +NT+I L ++L F ++ G+ P +TY + K+ VS+L
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 115 SHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF----DEMAVRTVVTWSSM 170
F + K G++ + N L A G A+Q+F D V VT++ M
Sbjct: 454 E---TFEKMKTK-GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 171 IAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNHV 230
+ Y EA+ + EM +P+ + + SL++ K V + + +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 231 DMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVISL--- 287
+V L K G +++A+ +F M +K TI + L + C+ D ++L
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 288 -FTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDLL 346
+M DMG PD +++ I+ G V E +F +M ++ + P ++ +
Sbjct: 630 MLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGV 687
Query: 347 ARAGLIQEAYDIIKN 361
+A LI++AY II N
Sbjct: 688 VKASLIEDAYKIITN 702
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 147/356 (41%), Gaps = 18/356 (5%)
Query: 29 DHNPYL--ISQFLLSASTISLPFAKSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFF 86
D N YL + P+A +++N +I L S E++ +
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 87 RRLQRSGLSPDNFTYPFALKACARVSSL-SHGGVFHSLTLKTGLSSDCYTDNTLLKFYAD 145
RR+ G P TY + + + S G+ + GL + YT ++
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEME-TLGLKPNVYTFTICIRVLGR 270
Query: 146 CGAIGFARQVF----DEMAVRTVVTWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVT 201
G I A ++ DE VVT++ +I A + A VF++M+ KP+ VT
Sbjct: 271 AGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVT 330
Query: 202 LVSLLSACSKMVNVSAGESIHSYITRN-HVDMSVELGTALFEMYAKCGLMKKALLVFNSM 260
++LL S ++ + + S + ++ HV V T L + K G +A + M
Sbjct: 331 YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF-TILVDALCKAGNFGEAFDTLDVM 389
Query: 261 PEK----NLQSFTIMISALGNHGCQKDVISLFTQMEDMGLKPDGLSFSVILSACSHMGLV 316
++ NL ++ +I L D + LF ME +G+KP ++ V + G
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 317 DEGKMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDI---IKNMPMEPNAV 369
F++M + I P++ + LA+AG +EA I +K++ + P++V
Sbjct: 450 VSALETFEKM-KTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 146/376 (38%), Gaps = 54/376 (14%)
Query: 56 SLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLS 115
+L + P ++ + IR L + E+ +R+ G PD TY + A L
Sbjct: 251 TLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 116 HGG-VFHSLTLKTGLSS-DCYTDNTLLKFYADCGAIGFARQVFDEMA----VRTVVTWSS 169
VF + KTG D T TLL ++D + +Q + EM V VVT++
Sbjct: 311 CAKEVFEKM--KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 170 MIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYITRNH 229
++ A + + EA MR PN T +L+ ++ + + +
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 230 VDMSVELGTALFEMYAKCGLMKKALLVFNSMPEK----NLQSFTIMISALGNHGCQKDVI 285
V + + Y K G AL F M K N+ + + +L G ++
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEG-------------------------- 319
+F ++D+GL PD +++++++ S +G +DE
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 320 ----------KMYFDRMVRMYNIKPSVEHYGCMVDLLARAGLIQEAYDIIKNMPME---P 366
KM+ RM M +KP+V Y ++ L + G IQEA ++ + M + P
Sbjct: 549 YKADRVDEAWKMFM-RMKEM-KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 367 NAVILRSFLGA-CRNQ 381
N + + C+N
Sbjct: 607 NTITFNTLFDCLCKND 622
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 135/333 (40%), Gaps = 39/333 (11%)
Query: 51 KSFFNSLPITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACAR 110
+ F L + P L +N +I L + + F +++ +G PD TY F L A +
Sbjct: 773 EKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGK 832
Query: 111 VSSLSHGGVFHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVF-DEMAVR----TVV 165
+ + ++ T N ++ G + A ++ D M+ R T
Sbjct: 833 SGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTAC 892
Query: 166 TWSSMIAAYVGSNSPSEALHVFQEMRLANEKPNSVTLVSLLSACSKMVNVSAGESIHSYI 225
T+ +I S EA +F+ M +PN L++ K AGE+
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK-----AGEA----- 942
Query: 226 TRNHVDMSVELGTALFEMYAKCGLMKKALLVFNSMPEKNLQSFTIMISALGNHGCQKDVI 285
+ ALF+ K G+ +L+++++++ L G + +
Sbjct: 943 ---------DAACALFKRMVKEGV------------RPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 286 SLFTQMEDMGLKPDGLSFSVILSACSHMGLVDEGKMYFDRMVRMYNIKPSVEHYGCMVDL 345
F ++++ GL PD + +++I++ ++E + F+ M I P + Y ++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 346 LARAGLIQEA---YDIIKNMPMEPNAVILRSFL 375
L AG+++EA Y+ I+ +EPN + +
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 59 ITPPLFAWNTIIRALANSPTPLESLVFFRRLQRSGLSPDNFTYPFALKACARVSSLSHGG 118
+ P L ++ ++ L E L +F+ L+ SGL+PD Y + + L
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 119 V-FHSLTLKTGLSSDCYTDNTLLKFYADCGAIGFARQVFDEMAVR----TVVTWSSMIAA 173
V F+ + G++ D YT N+L+ G + A ++++E+ V T++++I
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 174 YVGSNSPSEALHVFQEMRLANEKPNSVTLVSL 205
Y S P A V+Q M PN+ T L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108