Miyakogusa Predicted Gene

Lj4g3v2434980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2434980.1 tr|G7J2M5|G7J2M5_MEDTR BCCIP-like protein
OS=Medicago truncatula GN=MTR_3g096970 PE=4 SV=1,76.69,0,BCIP,BCP1
family; seg,NULL; CDK INHIBITOR P21 BINDING PROTEIN,BCP1
family,CUFF.51016.1
         (328 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44510.1 | Symbols:  | CDK inhibitor P21 binding protein | ch...   279   2e-75
AT5G03830.1 | Symbols:  | CDK inhibitor P21 binding protein | ch...   171   8e-43

>AT2G44510.1 | Symbols:  | CDK inhibitor P21 binding protein |
           chr2:18377411-18379030 FORWARD LENGTH=326
          Length = 326

 Score =  279 bits (714), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 160/326 (49%), Positives = 208/326 (63%), Gaps = 2/326 (0%)

Query: 1   MPRKPRRHNQRPKTWPITFSPFARALAHMHSFSTPKRHSQTIENPAPTLHSKGNGFIKGN 60
           MPR+P    +  K  P+TFSPF R L+          H +  +     +       I   
Sbjct: 1   MPRRPSSGRRVLKHQPLTFSPFMRLLSFASMARRDLSHPEDCQCSDEDISFDEKQKIPNL 60

Query: 61  LXXXXXXXXXXXXXXXGFDGVVQAXXXXXXXXXXXXHGVKTLLQTYLDDQEWDLSGFTDL 120
                                VQA            HGVK LLQ YLDD+EWDLS F D 
Sbjct: 61  PRKGKEEQVSDSSDEEDSQEDVQADFEFFDPKPTDFHGVKILLQNYLDDKEWDLSSFVDC 120

Query: 121 ILGQTTVGTVVKIEDDEDEGLFAVVTALNLWRYREQRCITTLKDFLLSKACQEKGVSDKL 180
           IL QTTVGTVVK+ DDEDE +FA+VTALN+ R ++ +C   LK+FL  K C EK +++ L
Sbjct: 121 ILEQTTVGTVVKVADDEDESVFALVTALNMARDKDNKCFRELKEFL-RKVCSEKNIANNL 179

Query: 181 RLLLGEQARNVGLLVSQRVVNLPPQLLPHLYNALFDEVSWATEDEPTEDLRNSFKFNHYL 240
            +LL ++A++VGLLVSQRV+NLPPQLLP LY+ LFDEVSWA EDEPTE LR SF+F  YL
Sbjct: 180 EMLLEKKAQDVGLLVSQRVMNLPPQLLPPLYDGLFDEVSWAIEDEPTEKLRRSFRFKSYL 239

Query: 241 ILSKIYKNKNIEKKRKLSNDSD-EPIIYVKPEDEIFHKLSSWSFCFPLQNQQVDSHELRN 299
           +++KIYK KN ++++    + D E  +++KPEDE+F +LSSWSF FP+++Q V S E++N
Sbjct: 240 LVTKIYKLKNPKQRKPRHGEEDIEDTVFLKPEDELFLELSSWSFTFPMRSQLVTSQEMKN 299

Query: 300 YRSMGLVMAVEADKIPTFRQELSSLI 325
           Y+ MGLVMAVEA+KIP FRQ L+SLI
Sbjct: 300 YQLMGLVMAVEANKIPKFRQMLNSLI 325


>AT5G03830.1 | Symbols:  | CDK inhibitor P21 binding protein |
           chr5:1018666-1020129 FORWARD LENGTH=278
          Length = 278

 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 90/141 (63%), Positives = 114/141 (80%), Gaps = 2/141 (1%)

Query: 108 DDQEWDL-SGFTDLILGQTTVGTVVKIEDDEDEGLFAVVTALNLWRYREQRCITTLKDFL 166
           +D + D+ +GF DLIL QT +GTVVK+ DDEDE LFA++TALNL RY+E +C   LK+FL
Sbjct: 66  EDSQGDVQAGFVDLILNQTALGTVVKVADDEDEALFALITALNLARYKENKCFRELKEFL 125

Query: 167 LSKACQEKGVSDKLRLLLGEQARNVGLLVSQRVVNLPPQLLPHLYNALFDEVSWATEDEP 226
           L K C EK V+  L LLL ++A++VGLLVSQRV+NLP QLLP LY+ LFDEVSWATEDEP
Sbjct: 126 L-KVCSEKNVASDLELLLEKKAKDVGLLVSQRVMNLPLQLLPPLYDGLFDEVSWATEDEP 184

Query: 227 TEDLRNSFKFNHYLILSKIYK 247
           TE+LR SF+F  Y++++KIYK
Sbjct: 185 TEELRGSFRFKSYILIAKIYK 205