Miyakogusa Predicted Gene

Lj4g3v2401070.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2401070.2 CUFF.50972.2
         (353 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G68100.1 | Symbols: IAR1 | ZIP metal ion transporter family |...   198   6e-51

>AT1G68100.1 | Symbols: IAR1 | ZIP metal ion transporter family |
           chr1:25521325-25524032 FORWARD LENGTH=469
          Length = 469

 Score =  198 bits (503), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/285 (44%), Positives = 155/285 (54%), Gaps = 26/285 (9%)

Query: 71  LPEELAEEEDMKLYGFG-LPHHHDHYIGIEELSGLGLWLNAMGCSFLVSMASLICLILLP 129
           LPEELAEEEDM+L GFG   H HDH      L+G  LWLNA+GCS LVS+ASLICL+LLP
Sbjct: 72  LPEELAEEEDMRLCGFGPCLHDHDHESS-STLTGFALWLNALGCSLLVSLASLICLVLLP 130

Query: 130 VIFVQGKPSKAVVDSLALFGAGAMLGDAFLHQLPHAF---XXXXXXXXXXXXXXXXXXXX 186
           ++FVQGKPSK  VDSLALFGAGAMLGDAFLHQLPHAF                       
Sbjct: 131 IMFVQGKPSKWFVDSLALFGAGAMLGDAFLHQLPHAFGGGHSHSNDHHENHDHHDHSHSD 190

Query: 187 XXXXXXXXXXXXTGISILAGIVLFLLVEKIVRYVEEXXXXXXXXXXXXXXXXXXXKKKLD 246
                        G+S+LAGIV+FLLVEK+VRYVEE                   KK  D
Sbjct: 191 SPSHSHSIQDLSVGLSVLAGIVVFLLVEKLVRYVEENSSGSNTWGHHHHHHHAGSKKLKD 250

Query: 247 DSNSNVKLQSESFNAKGESVLNEAEAKESDQESHEILKGDNPAQPESLLRKRTGSNAAKG 306
           + + N   Q  S +A    ++N +E                    +  LRKR  S +   
Sbjct: 251 EGDHNNLDQQSSSDA----IVNSSEKVSG-------------GSTDKSLRKRKTSASDAT 293

Query: 307 DNADASAVVKS---TDVKEPVRS-PTSLVFGYLNLFSDGVVSYIE 347
           D +D+   + S   +D  E V +  +SLVFGYLNLFSDGV ++ +
Sbjct: 294 DKSDSGTEITSDGKSDKPEQVETRSSSLVFGYLNLFSDGVHNFTD 338