Miyakogusa Predicted Gene
- Lj4g3v2401060.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2401060.1 Non Chatacterized Hit- tr|G7K9J9|G7K9J9_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,40.24,0.000000004,seg,NULL,CUFF.50963.1
(162 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31940.1 | Symbols: | unknown protein; LOCATED IN: plasma me... 63 1e-10
AT2G01913.1 | Symbols: | unknown protein; Has 35333 Blast hits ... 62 1e-10
AT2G35585.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 59 1e-09
>AT1G31940.1 | Symbols: | unknown protein; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G35585.1);
Has 67 Blast hits to 67 proteins in 17 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:11470293-11471154 REVERSE LENGTH=158
Length = 158
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 42/54 (77%)
Query: 41 GVDKNTDFFPVEHPLEPPDEDRPVKCPMPESSVISDERMHERRFAENLRKRGEI 94
G++ T+F PVEHP+EP D D P++CP+PE S+++D R+ + R + ++R++G++
Sbjct: 48 GIEVATEFKPVEHPVEPLDNDLPIQCPLPEPSILNDGRIWKERVSASMRRKGDL 101
>AT2G01913.1 | Symbols: | unknown protein; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr2:421927-422569 REVERSE LENGTH=138
Length = 138
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 15 EFSLIDETGATEQNSIIMEVHHHHHQGVDKNTDFFPVEHPLEPPDEDRPVKCPMPESSVI 74
+F D+ + E+ +++ME +Q + +F PVEHP+EP +EDRPVKCP+P SS +
Sbjct: 2 DFDSADKRESVEE-TVMMEYDEETNQF---DVEFCPVEHPIEPEEEDRPVKCPVPISSSL 57
Query: 75 SDERMHERRFAENLRKRGEISEGMAEGERTDGIDN--QPP----ARGVRKRHHNLTHGGD 128
+ K E S+ R + PP R VRKRH++ G+
Sbjct: 58 -------------IHKPKEKSKPGWVKHRASSYETPVYPPPRHHVRNVRKRHNSFDVEGN 104
Query: 129 XXXXXXXXXXXXXXXXSQNITIFQVLQQLDKFES 162
N+T ++VLQQ+ +FES
Sbjct: 105 NNFFTRSHDDDETTSRRSNVTFYRVLQQVQEFES 138
>AT2G35585.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:14936889-14937873 FORWARD
LENGTH=156
Length = 156
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Query: 41 GVDKNTDFFPVEHPLEPPDEDRPVKCPMPESSVISDERMH-ERRFAENLRKRGEIS---E 96
G++ T+F PV+HP+EP D D+P++CP+PE S+++D R+ ER A ++R+R +++ +
Sbjct: 47 GIEVATEFKPVDHPMEPLDNDQPIQCPLPEPSILNDGRLWKERVSASSMRRRSDLAIVQD 106
Query: 97 GMAE 100
GM E
Sbjct: 107 GMDE 110