Miyakogusa Predicted Gene

Lj4g3v2400850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2400850.1 Non Chatacterized Hit- tr|K4AXM8|K4AXM8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,46.15,3e-17,
,CUFF.50945.1
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G19190.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    80   2e-16
AT3G06070.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    74   2e-14

>AT5G19190.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:6457349-6457918
           FORWARD LENGTH=154
          Length = 154

 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/104 (49%), Positives = 71/104 (68%), Gaps = 11/104 (10%)

Query: 1   MEVAVELEDDLFFADLSKQLSLLIMDEDD--DPL-ASCAVHPQSFSGAIHPPPQSA-ILY 56
           M + +EL+DD+FFAD+SKQ+SLLIMDED+  +P+  S +    SF G      Q+A  +Y
Sbjct: 1   MAMELELDDDVFFADISKQISLLIMDEDEHLNPVSLSSSSSSLSFQGLFRGGYQTAPYMY 60

Query: 57  EQVLRRQSKGTGVFIPQSTQPRRK----QRKGRTSSYAKYQKQS 96
           +Q    QSKGTGVFIP+S+QPRR+    Q++GR SS+   Q+ S
Sbjct: 61  QQ---EQSKGTGVFIPKSSQPRRRPHHHQKQGRYSSFNAKQQHS 101


>AT3G06070.1 | Symbols:  | unknown protein; BEST Arabidopsis
          thaliana protein match is: unknown protein
          (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in
          12 species: Archae - 0; Bacteria - 0; Metazoa - 1;
          Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes -
          0 (source: NCBI BLink). | chr3:1831305-1831846 REVERSE
          LENGTH=151
          Length = 151

 Score = 73.9 bits (180), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 7/88 (7%)

Query: 1  MEVAVELEDDLFFADLSKQLSLLIMDEDD-DPLA-SCAVHPQS-FSGAIHPPPQSAILYE 57
          M + +EL+DD+FFAD+SKQL+LLI DED+ +P++ S +V  Q  F G         ++Y 
Sbjct: 1  MAMELELDDDVFFADISKQLNLLITDEDEQNPISLSSSVSFQGLFRGNYQTSATPYMMYN 60

Query: 58 QVLR----RQSKGTGVFIPQSTQPRRKQ 81
          + +     R+SKGTGVFIP+S+QPRRK 
Sbjct: 61 EQINYNVIRESKGTGVFIPRSSQPRRKH 88