Miyakogusa Predicted Gene

Lj4g3v2376080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2376080.1 Non Chatacterized Hit- tr|I1GKI5|I1GKI5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,38.16,7e-19,AWPM-19,AWPM-19-like,CUFF.50881.1
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18970.1 | Symbols:  | AWPM-19-like family protein | chr5:633...   248   2e-66
AT5G46530.1 | Symbols:  | AWPM-19-like family protein | chr5:188...   132   1e-31
AT1G29520.1 | Symbols:  | AWPM-19-like family protein | chr1:103...   121   2e-28
AT1G04560.1 | Symbols:  | AWPM-19-like family protein | chr1:124...    89   2e-18

>AT5G18970.1 | Symbols:  | AWPM-19-like family protein |
           chr5:6333714-6334539 REVERSE LENGTH=171
          Length = 171

 Score =  248 bits (632), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 123/172 (71%), Positives = 144/172 (83%), Gaps = 6/172 (3%)

Query: 1   MASAGSKSAASFILALNLFLYFIVIVIASWAVNHGIHRSKEAASVLSPPAKLFPIYFPMG 60
           MAS GSKSAA  +L LNL LYF++ +IASWAVNHGI R++E+AS LS PAK+FPIYFP+G
Sbjct: 1   MASGGSKSAAFMLLMLNLGLYFVITIIASWAVNHGIERTRESASTLSLPAKIFPIYFPVG 60

Query: 61  NMATGFFVILTLIAGVVGFTTSLTGLHNILQWNAPNLHAAAMSSLATWVLTLLAMGFACK 120
           NMATGFFVI TLIAGVVG  TSLTG+ N+LQW++PNLH+AA SSL +W LTLLAMG ACK
Sbjct: 61  NMATGFFVIFTLIAGVVGMATSLTGIINVLQWDSPNLHSAAASSLISWSLTLLAMGLACK 120

Query: 121 EIELGWTDSNLRTLEVITIIVSATQLLCTGVIHVGVSEVI-----PHRMGRV 167
           EI +GWT++NLRTLEV+TIIVSATQLLCTG IH GV E +     PH +GRV
Sbjct: 121 EINIGWTEANLRTLEVLTIIVSATQLLCTGAIHAGVGETVASGERPH-LGRV 171


>AT5G46530.1 | Symbols:  | AWPM-19-like family protein |
           chr5:18875576-18876779 FORWARD LENGTH=157
          Length = 157

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 69/147 (46%), Positives = 94/147 (63%)

Query: 7   KSAASFILALNLFLYFIVIVIASWAVNHGIHRSKEAASVLSPPAKLFPIYFPMGNMATGF 66
           K  ASF+L LN  +Y IV+ I +W++N  I+      +  S PA   PI+FPMGN ATGF
Sbjct: 7   KPVASFLLVLNFCMYAIVLGIGAWSMNKAINHGFLIGADYSLPAHFSPIHFPMGNAATGF 66

Query: 67  FVILTLIAGVVGFTTSLTGLHNILQWNAPNLHAAAMSSLATWVLTLLAMGFACKEIELGW 126
           F++  LIAGV G  + ++G+ ++  W   +L AA  ++   W LTLLAMGF CKEIELG 
Sbjct: 67  FIMFALIAGVAGAASVISGISHLQSWTTTSLPAAVSAATIAWSLTLLAMGFGCKEIELGM 126

Query: 127 TDSNLRTLEVITIIVSATQLLCTGVIH 153
            ++ LRT+E   II+SATQLL    I+
Sbjct: 127 RNARLRTMEAFLIILSATQLLYIAAIY 153


>AT1G29520.1 | Symbols:  | AWPM-19-like family protein |
           chr1:10323735-10324525 FORWARD LENGTH=158
          Length = 158

 Score =  121 bits (304), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/153 (48%), Positives = 94/153 (61%)

Query: 1   MASAGSKSAASFILALNLFLYFIVIVIASWAVNHGIHRSKEAASVLSPPAKLFPIYFPMG 60
           MA    K  AS +L LN  +Y IV+ I  WA+N  I    E    L  PA   PIYFPMG
Sbjct: 1   MAGEQIKPVASGLLVLNFCMYVIVLGIGGWAMNRAIDHGFEVGPNLELPAHFSPIYFPMG 60

Query: 61  NMATGFFVILTLIAGVVGFTTSLTGLHNILQWNAPNLHAAAMSSLATWVLTLLAMGFACK 120
           N ATGFFVI  L+AGVVG  ++++GL +I  W   +L AAA ++   W LT+LAMGFA K
Sbjct: 61  NAATGFFVIFALLAGVVGAASTISGLSHIRSWTVGSLPAAATAATIAWTLTVLAMGFAWK 120

Query: 121 EIELGWTDSNLRTLEVITIIVSATQLLCTGVIH 153
           EIEL   ++ LRT+E   II+S TQL+    +H
Sbjct: 121 EIELQGRNAKLRTMEAFLIILSVTQLIYIAAVH 153


>AT1G04560.1 | Symbols:  | AWPM-19-like family protein |
           chr1:1245070-1245888 FORWARD LENGTH=186
          Length = 186

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 14/156 (8%)

Query: 1   MASAGSKSAASFILALNLFLYFIVIVIASWAVNHGIHRSKEAASVLSPPAKLFPIYFPMG 60
           MA+   ++ A+ +L LNL +Y IV+  ASW +N  I+      S               G
Sbjct: 1   MATTVGRNIAAPLLFLNLVMYLIVLGFASWCLNKYINGQTNHPSF-------------GG 47

Query: 61  NMATGFFVILTLIAGVVGFTTSLTGLHNILQWNAPNLHAAAMSSLATWVLTLLAMGFACK 120
           N AT FF+  +++A VVG  + L G ++I  W   +L AA  SS+  W +T LAMG ACK
Sbjct: 48  NGATPFFLTFSILAAVVGVASKLAGANHIRFWRNDSLAAAGASSIVAWAITALAMGLACK 107

Query: 121 EIEL-GWTDSNLRTLEVITIIVSATQLLCTGVIHVG 155
           +I + GW    L+ +E   II++ TQLL   +IH G
Sbjct: 108 QINIGGWRGWRLKMIEAFIIILTFTQLLYLMLIHAG 143