Miyakogusa Predicted Gene

Lj4g3v2374990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2374990.1 Non Chatacterized Hit- tr|B9RSW6|B9RSW6_RICCO
Inosine-uridine preferring nucleoside hydrolase,
putat,65.22,8e-17,Nucleoside hydrolase,Inosine/uridine-preferring
nucleoside hydrolase domain; seg,NULL; no descriptio,CUFF.50888.1
         (106 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18870.1 | Symbols:  | Inosine-uridine preferring nucleoside ...    90   3e-19
AT5G18860.1 | Symbols:  | inosine-uridine preferring nucleoside ...    86   6e-18
AT5G18890.1 | Symbols:  | Inosine-uridine preferring nucleoside ...    55   9e-09

>AT5G18870.1 | Symbols:  | Inosine-uridine preferring nucleoside
           hydrolase family protein | chr5:6298386-6300289 FORWARD
           LENGTH=258
          Length = 258

 Score = 90.1 bits (222), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/66 (77%), Positives = 58/66 (87%)

Query: 41  PRRILMDTDVDTDDFFALLYLLKLNRSQFQLEGITINANSWLDAGHAVNQIYDILYMMGR 100
           P RIL+DTDVDTDDF ALLYLLKLN+++F L GIT++ANSW +AGH VN IYDILYMMGR
Sbjct: 28  PHRILLDTDVDTDDFIALLYLLKLNKTEFDLVGITLSANSWTNAGHGVNHIYDILYMMGR 87

Query: 101 DDIAVG 106
           DDI VG
Sbjct: 88  DDITVG 93


>AT5G18860.1 | Symbols:  | inosine-uridine preferring nucleoside
           hydrolase family protein | chr5:6291023-6295581 FORWARD
           LENGTH=890
          Length = 890

 Score = 85.5 bits (210), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/51 (70%), Positives = 46/51 (90%)

Query: 56  FALLYLLKLNRSQFQLEGITINANSWLDAGHAVNQIYDILYMMGRDDIAVG 106
           FA+LYLLKLN+S+F L GIT++AN+W +AGHAVNQ+YD+L+MM RDDI VG
Sbjct: 46  FAILYLLKLNKSEFDLVGITLSANAWTNAGHAVNQVYDLLHMMDRDDIPVG 96



 Score = 58.9 bits (141), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 44  ILMDTDVDTDDFFALLYLLKLNRSQFQLEGITINANSWLDAGHAVNQIYDILYMMGRDDI 103
           ++ D D+   DF +L YLLK+   +  L+ I ++   W +A   ++ +YD+L+MMGRDDI
Sbjct: 511 VVFDMDMSAGDFLSLFYLLKVPVDKIDLKAIIVSPTGWANAA-TIDVVYDLLHMMGRDDI 569

Query: 104 AVG 106
            VG
Sbjct: 570 PVG 572


>AT5G18890.1 | Symbols:  | Inosine-uridine preferring nucleoside
           hydrolase family protein | chr5:6301652-6304088 FORWARD
           LENGTH=550
          Length = 550

 Score = 55.1 bits (131), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 44  ILMDTDVDTDDFFALLYLLKLNRSQFQLEGITINANSWLDAGHAVNQIYDILYMMGRDDI 103
           ++ D D+   DF +L YLLK+      L+ + ++   W +    ++ +YD+L+MMGRDDI
Sbjct: 164 VVFDMDMSAGDFLSLFYLLKVPVEIIDLKAVIVSPTGWANTA-TIDVVYDLLHMMGRDDI 222

Query: 104 AVG 106
            VG
Sbjct: 223 PVG 225