Miyakogusa Predicted Gene
- Lj4g3v2374800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2374800.1 tr|G7JJ20|G7JJ20_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_4g1,81.77,0,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; no description,Tetratricopeptide-like
,CUFF.50854.1
(630 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 692 0.0
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 3e-97
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 1e-96
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 6e-92
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 1e-89
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 323 2e-88
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 321 8e-88
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 317 1e-86
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 2e-86
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 3e-86
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 8e-85
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 3e-84
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 4e-84
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 308 7e-84
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 307 1e-83
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 304 1e-82
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 303 2e-82
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 303 3e-82
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 3e-81
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 9e-81
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 291 1e-78
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 6e-78
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 6e-78
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 288 7e-78
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 2e-77
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 2e-76
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 280 2e-75
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 275 5e-74
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 8e-74
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 274 1e-73
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 274 1e-73
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 273 2e-73
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 273 2e-73
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 272 6e-73
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 270 2e-72
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 270 2e-72
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 270 3e-72
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 269 6e-72
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 9e-72
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 1e-71
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 262 5e-70
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 6e-70
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 261 1e-69
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 6e-69
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 257 2e-68
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 256 5e-68
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 8e-68
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 254 2e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 2e-67
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 253 3e-67
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 252 4e-67
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 6e-66
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 6e-66
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 247 1e-65
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 246 3e-65
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 7e-65
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 1e-64
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 241 1e-63
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 235 7e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 235 8e-62
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 9e-62
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 9e-62
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 3e-61
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 2e-60
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 230 2e-60
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 2e-60
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 5e-60
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 8e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 7e-58
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 4e-57
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 219 6e-57
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 8e-57
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 4e-56
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 5e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 213 4e-55
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 3e-54
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 3e-54
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 7e-52
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 2e-49
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 4e-49
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 7e-49
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 9e-45
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 173 4e-43
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 108 2e-23
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 97 3e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 9e-20
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 1e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 90 5e-18
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 88 2e-17
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 84 3e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 4e-16
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 83 7e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 82 8e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 6e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 8e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 9e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 77 3e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 4e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 72 1e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 71 2e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 67 3e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 65 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 64 3e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 4e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 4e-10
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 60 6e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 1e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 3e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 3e-07
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 53 7e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 49 9e-06
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/618 (54%), Positives = 449/618 (72%), Gaps = 5/618 (0%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S L + TSKI SLA+SGRI AR++FD MP+ D+VAWN M+T+YS LGL+Q++++LF +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R S++KPD +S++A LS CA + FG I +LV+ SG+ +SLPV NSLIDMYGKC
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 126 HDARKVFDEMA-DS-NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
A KVF +M DS NEVTWCSLLFAY N+ F AL+VF MP+RV AWN MI+GHA
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACT-ESRDMLYGCMVHGFVIKSGWSSAME 242
G++E+CL LFKEM ES ++PD +TFS+LMNAC+ +S +++YG MVH ++K+GWSSA+E
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
KNS+LSFY KL DAM S QVSWN+IIDA MK+G+T+KA F AP+KN
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
IV+WT+MI GY RNG+GE AL F++M ++ + D+ GAVLHAC+ LA+L HGKM+H
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE 422
C+I G Y +VGN+LVN+YAKCGD++ + AF I KDLVSWN+MLFAFG+HG A++
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQ 421
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
A+ L+ M+ASG+KPD VTF G+L TCSH GL++EG F SM ++ + +DHV CM+
Sbjct: 422 ALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMI 481
Query: 483 DMLGRGGYVAEAQSLAKKYSK--TSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
DM GRGG++AEA+ LA YS T + +S+E LLGAC H G V + LK EP
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEP 541
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP 600
+E+ +V+LSNLYC++G+WKE E VR+EM+++G+KK PG SWIE+ N V+ FV G++S P
Sbjct: 542 SEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHP 601
Query: 601 YMADISNILYFLEIEMRH 618
+ ++S L L+ EMR+
Sbjct: 602 RLEELSETLNCLQHEMRN 619
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/617 (33%), Positives = 330/617 (53%), Gaps = 40/617 (6%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
++ S + L + G + A LF MP+RD WN+M++ ++ +++L F M
Sbjct: 86 IYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHK 145
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ +S+++ LSAC+G + G +H+L+ S + S + + ++L+DMY KC +D
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A++VFDEM D N V+ WN++I + G
Sbjct: 206 AQRVFDEMGDRNVVS-------------------------------WNSLITCFEQNGPA 234
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNS 246
L +F+ M ES +PD+ T +++++AC + G VHG V+K+ + + + N+
Sbjct: 235 VEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNA 294
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
+ YAK +A +F+S N ++ ++I + T+ A L F + ++N+VSW
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSW 354
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
++I GYT+NG E ALS+F + R S+ + +L ACA LA L G H +++
Sbjct: 355 NALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLK 414
Query: 367 RGL------DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
G + +FVGNSL++MY KCG +E L F ++E+D VSWN+M+ F +G
Sbjct: 415 HGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYG 474
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
NEA+ LFREM+ SG KPD +T G+L C H G ++EG +F SM+ +FG++ DH C
Sbjct: 475 NEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTC 534
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
MVD+LGR G++ EA+S+ ++ + + LL AC H ++ G V E L +EP
Sbjct: 535 MVDLLGRAGFLEEAKSMIEEMPMQPDSVI--WGSLLAACKVHRNITLGKYVAEKLLEVEP 592
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP 600
YV+LSN+Y G+W++ VRK M +GV K PG SWI+I+ F+ + S P
Sbjct: 593 SNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHP 652
Query: 601 YMADISNILYFLEIEMR 617
I ++L L EMR
Sbjct: 653 RKKQIHSLLDILIAEMR 669
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 211/472 (44%), Gaps = 81/472 (17%)
Query: 73 DSFSYSAALSACAGGSHHG-FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
DS ++ L +C + +HA V+ SG+ + + + N LID Y KC D R+V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD+M N TW S++ A +FRSMPER + WN+M++G A+ E L
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
F M + + ++++F+++++AC+ DM G VH + KS + S + + ++++ Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
+K +DA +F+ G N VSWN S+I
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWN-------------------------------SLIT 226
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG-LD 370
+ +NG AL +F M + ++ D + +V+ ACASL+ + G+ VH +++ L
Sbjct: 227 CFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 371 KYLFVGNSLVNMYAKCGDL-------------------------------EGSALAFCGI 399
+ + N+ V+MYAKC + + + L F +
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 400 LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS-----HLGL 454
E+++VSWN+++ + +G EA+ LF + V P +F +L C+ HLG+
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 455 ------IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
+ GF F + + + ++DM + G V E + +K
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNS------LIDMYVKCGCVEEGYLVFRK 452
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 198/613 (32%), Positives = 328/613 (53%), Gaps = 26/613 (4%)
Query: 29 KLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGS 88
+ FD++P RDSV+W MI Y ++G Y +++ + G M +P F+ + L++ A
Sbjct: 101 EFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATR 160
Query: 89 HHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLF 148
G +H+ +V G R ++ V+NSL++MY KC P A+ VFD M + +W +++
Sbjct: 161 CMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIA 220
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC-ESLYQPDQW 207
+ +A+ F M ER + WN+MI+G +RG L +F +M +SL PD++
Sbjct: 221 LHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRF 280
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
T +++++AC + G +H ++ +G+ + V N+++S Y++ A +
Sbjct: 281 TLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340
Query: 268 GA--FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
G + A++D ++KLGD +A F D+++V+WT+MIVGY ++G+ A+++
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
F M + ++ A+L +SLA L+HGK +H ++ G + V N+L+ MYAK
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 386 CGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
G++ ++ AF I E+D VSW SM+ A HG A EA+ LF M+ G++PD +T+ G
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+ C+H GL+++G +F M + + H ACMVD+ GR G + EAQ +K
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
T + LL AC H ++ G E L LEPE Y L+NLY A G+W+EA
Sbjct: 581 PDVVT--WGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAK 638
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP--------------------YMAD 604
+RK M D VKK G SWIE+++ V F + + P Y+ D
Sbjct: 639 IRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPD 698
Query: 605 ISNILYFLEIEMR 617
+++L+ LE E++
Sbjct: 699 TASVLHDLEEEVK 711
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 192/387 (49%), Gaps = 34/387 (8%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
++H V+ SG S+ + N+L+++Y K ARK+FDEM +W ++L AY+
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
E F +P+R ++W TMI G+ G+ + + +M + +P Q+T + +
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
+ + +R M G VH F++K G + V NS+L+ YAK P A +F+ +
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
SWNA+I HM++G A F+Q +++IV+W SMI G+ + G AL +F M R+
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 333 S-IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC----- 386
S + D +VL ACA+L L GK +HS I+ G D V N+L++MY++C
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 387 ----------------------------GDLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
GD+ + F + ++D+V+W +M+ + HG
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGM 445
EA+ LFR MV G +P+ T M
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 165/377 (43%), Gaps = 50/377 (13%)
Query: 204 PDQWTFSALMNACT--------ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
P + S L+ CT +S +VH VIKSG ++ + N++++ Y+K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
A ++F+ SWN ++ A+ K GD F Q P ++ VSWT+MIVGY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
G A+ + DM + I+ VL + A+ + GK VHS I++ GL + V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 376 GNSLVNMYAKCGD-------------------------------LEGSALAFCGILEKDL 404
NSL+NMYAKCGD ++ + F + E+D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVA-SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
V+WNSM+ F G A+ +F +M+ S + PD T +L C++L E +
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL----EKLCIGK 299
Query: 464 SMSSEFGLSHGMD----HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGAC 519
+ S ++ G D + ++ M R G V A+ L ++ T + + LL
Sbjct: 300 QIHSHI-VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG-TKDLKIEGFTALLDGY 357
Query: 520 HAHGDLGTGSSVGEYLK 536
GD+ ++ LK
Sbjct: 358 IKLGDMNQAKNIFVSLK 374
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/614 (33%), Positives = 331/614 (53%), Gaps = 11/614 (1%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPD--RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN 69
T+ + SG I AR +F++ P RD+V +NAMIT +SH +++LF M+
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 70 SKPDSFSYSAALSACAGGSHHGFGSV-IHALVVVSGYRSSLPVANSLIDMYGKCLKP--- 125
KPD+F++++ L+ A + V HA + SG V+N+L+ +Y KC
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 126 -HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE-IAWNTMIAGHAR 183
H ARKVFDE+ + +E +W +++ Y + F + E+ M + ++ +A+N MI+G+
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
RG + L + + M S + D++T+ +++ AC + + G VH +V++ +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHF 322
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
NS++S Y K +A +F A + VSWNA++ ++ G +A L F++ +KNI
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
+SW MI G NG GE L +F M R + + + +CA L +G+ H+
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
+++ G D L GN+L+ MYAKCG +E + F + D VSWN+++ A G HG EA
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVD 483
+ ++ EM+ G++PD +T +L CSH GL+D+G +F SM + + + G DH A ++D
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKE 543
+L R G ++A+S+ + A +E LL C HG++ G + L L PE +
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEI--WEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 544 VGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMA 603
Y++LSN++ A+GQW+E VRK M D+GVKK SWIE+ V F+ + S P
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680
Query: 604 DISNILYFLEIEMR 617
+ L L EMR
Sbjct: 681 AVYIYLQDLGKEMR 694
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/553 (25%), Positives = 247/553 (44%), Gaps = 95/553 (17%)
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
+H ++ G++ + N LID+Y K + + AR++FDE+++ +++ +++ Y S
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 156 FGMALEVFRSMPE--RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM 213
+A VF P R + +N MI G + + + + LF +M ++PD +TF++++
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 214 NACTESRDMLYGCM-VHGFVIKSGWSSAMEVKNSILSFYAKL-ECPS---DAMEMFNSFG 268
D C+ H +KSG V N+++S Y+K PS A ++F+
Sbjct: 156 AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL 215
Query: 269 AFNQVSWNAIIDAHMKLG--DTQKAFLAFQQAPDKN--IVSWTSMIVGYTRNGNGELALS 324
++ SW ++ ++K G D + L + D N +V++ +MI GY G + AL
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELL---EGMDDNMKLVAYNAMISGYVNRGFYQEALE 272
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
M M + I+LD +V+ ACA+ +L GK VH+ ++RR D NSLV++Y
Sbjct: 273 MVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYY 331
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS----------- 433
KCG + + F + KDLVSWN++L + G EA +F+EM
Sbjct: 332 KCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISG 391
Query: 434 --------------------GVKPDEVTFTGMLMTCSHL--------------------- 452
G +P + F+G + +C+ L
Sbjct: 392 LAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSS 451
Query: 453 --------------GLIDEGFAFFRSMSSEFGLSHGMDHVA--CMVDMLGRGGYVAEAQS 496
G+++E FR+M +D V+ ++ LG+ G+ AEA
Sbjct: 452 LSAGNALITMYAKCGVVEEARQVFRTMPC-------LDSVSWNALIAALGQHGHGAEAVD 504
Query: 497 LAKKYSKTSGARTNSYEVL--LGACHAHGDLGTGSSVGEYLKTLE--PEKEVGYVMLSNL 552
+ ++ K G R + +L L AC G + G + ++T+ P Y L +L
Sbjct: 505 VYEEMLK-KGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDL 563
Query: 553 YCASGQWKEAEIV 565
C SG++ +AE V
Sbjct: 564 LCRSGKFSDAESV 576
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 197/609 (32%), Positives = 319/609 (52%), Gaps = 13/609 (2%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A + +PD +++++I A + L+ QS+ +F M PDS CA
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
S G IH + VSG V S+ MY +C + DARKVFD M+D + VT +L
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSAL 188
Query: 147 LFAYANSSLFGMALEVFRSMP----ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLY 202
L AYA + + M E ++WN +++G R G + + +F+++ +
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
Query: 203 QPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAME 262
PDQ T S+++ + +S + G ++HG+VIK G V ++++ Y K +
Sbjct: 249 CPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIIS 308
Query: 263 MFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQ----QAPDKNIVSWTSMIVGYTRNGN 318
+FN F NA I + G KA F+ Q + N+VSWTS+I G +NG
Sbjct: 309 LFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
AL +F +M ++ +++ ++L AC ++A L HG+ H +R L + VG++
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L++MYAKCG + S + F + K+LV WNS++ F +HG+A E M +F ++ + +KPD
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
++FT +L C +GL DEG+ +F+ MS E+G+ ++H +CMV++LGR G + EA L
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
K+ + + LL +C ++ E L LEPE YV+LSN+Y A G
Sbjct: 549 KEMPFEPDSCV--WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRH 618
W E + +R +M G+KK PG SWI+++N V ++G+ S P + I+ + + EMR
Sbjct: 607 WTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRK 666
Query: 619 T--RPINFD 625
+ RP N D
Sbjct: 667 SGHRP-NLD 674
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 204/474 (43%), Gaps = 62/474 (13%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ +Y+N + F A V +S+P+ +++++I + +G+F M PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
L C E G +H SG V+ S+ Y + DA ++F+
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTSMIVGYTRNGNGEL 321
+ V+ +A++ A+ + G ++ + + NIVSW ++ G+ R+G +
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A+ MF + D + +VL + +L G+++H +I++GL K V +++++
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 382 MYAKCGDLEG--------------------SALAFCGILEK---------------DLVS 406
MY K G + G + L+ G+++K ++VS
Sbjct: 296 MYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS 466
W S++ +G+ EA+ LFREM +GVKP+ VT ML C ++ + G RS
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG----RSTH 411
Query: 467 SEFGLSHGMDHV---ACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
H +D+V + ++DM + G + +Q + + NS L+ HG
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNS---LMNGFSMHG 468
Query: 524 DLGTGSSVGEYL--KTLEPEKEVGYVMLSNLYCASGQ-------WKEAEIVRKE 568
S+ E L L+P+ ++ ++L A GQ WK +++ +E
Sbjct: 469 KAKEVMSIFESLMRTRLKPD----FISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 181/449 (40%), Gaps = 80/449 (17%)
Query: 20 RSGRICHARKLFDEMPDRDS-----------------------------------VAWNA 44
R GR+ ARK+FD M D+D V+WN
Sbjct: 163 RCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNG 222
Query: 45 MITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSG 104
+++ ++ G +++++ +F + PD + S+ L + G +IH V+ G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 105 YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFR 164
V +++IDMYGK + +F++ + + + + L ALE+F
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 165 SMPERV----EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
E+ ++W ++IAG A+ G+ L LF+EM + +P+ T +++ AC
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
+ +G HGF ++ + V ++++ YAK
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAK--------------------------- 435
Query: 281 AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
G + + F P KN+V W S++ G++ +G + +S+F + R ++ D +
Sbjct: 436 ----CGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFIS 491
Query: 341 AGAVLHACASLAILAHG-----KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDL-EGSAL 394
++L AC + + G M I+ L+ Y + +VN+ + G L E L
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY----SCMVNLLGRAGKLQEAYDL 547
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEA 423
E D W ++L + L + A
Sbjct: 548 IKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ GRI ++ +F+ MP ++ V WN+++ +S G ++ +S+F S+ + KPD S++
Sbjct: 434 AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFT 493
Query: 79 AALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+ LSAC G + G+ + G + L + ++++ G+ K +A + EM
Sbjct: 494 SLLSACGQVGLTDEGW-KYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP 552
Query: 137 -DSNEVTWCSLL 147
+ + W +LL
Sbjct: 553 FEPDSCVWGALL 564
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/599 (31%), Positives = 304/599 (50%), Gaps = 35/599 (5%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-R 66
LF + +++ +++G I F+++PDRD V WN +I YS GL ++ + +M R
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
++ + L + H G IH V+ G+ S L V + L+ MY
Sbjct: 132 DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCIS 191
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
DA+KVF + D N V + SL+ + AL++FR M E+ ++W MI G A+ G
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGL 250
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
+ + F+EM + DQ+ F +++ AC + G +H +I++ + + V ++
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ Y K +C A +F+ + KN+VSW
Sbjct: 311 LIDMYCKCKCLHYAKTVFD-------------------------------RMKQKNVVSW 339
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
T+M+VGY + G E A+ +FLDM R+ I D+ G + ACA+++ L G H I
Sbjct: 340 TAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAIT 399
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
GL Y+ V NSLV +Y KCGD++ S F + +D VSW +M+ A+ GRA E + L
Sbjct: 400 SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQL 459
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
F +MV G+KPD VT TG++ CS GL+++G +F+ M+SE+G+ + H +CM+D+
Sbjct: 460 FDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFS 519
Query: 487 RGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGY 546
R G + EA A + LL AC G+L G E L L+P GY
Sbjct: 520 RSGRLEEAMRFINGMPFPPDAI--GWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGY 577
Query: 547 VMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
+LS++Y + G+W +R+ M ++ VKK PG SWI+ + + +F + + SSPY+ I
Sbjct: 578 TLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 216/426 (50%), Gaps = 8/426 (1%)
Query: 77 YSAALSACAG---GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
YS + C G + + +IH ++ + + N+++ Y AR+VFD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL 193
+ N +W +LL AY+ + L F +P+R + WN +I G++ G V A +
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 194 FKEMCESL-YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
+ M + T ++ + + + G +HG VIK G+ S + V + +L YA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVG 312
+ C SDA ++F N V +N+++ + G + A F+ +K+ VSW +MI G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-GMEKDSVSWAAMIKG 244
Query: 313 YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY 372
+NG + A+ F +M +++D G+VL AC L + GK +H+CIIR +
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 373 LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
++VG++L++MY KC L + F + +K++VSW +M+ +G GRA EA+ +F +M
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFF-RSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
SG+ PD T + C+++ ++EG F ++++S GL H + +V + G+ G +
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS--GLIHYVTVSNSLVTLYGKCGDI 422
Query: 492 AEAQSL 497
++ L
Sbjct: 423 DDSTRL 428
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Query: 7 YLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR 66
Y+ + S + + G I + +LF+EM RD+V+W AM++AY+ G +++ LF M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVS-GYRSSLPVANSLIDMYGKCLKP 125
KPD + + +SAC+ G L+ G S+ + +ID++ + +
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 126 HDARKVFDEMA-DSNEVTWCSLLFAYAN 152
+A + + M + + W +LL A N
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSACRN 552
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 302/598 (50%), Gaps = 65/598 (10%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
++ R+ ARK+FDEM +RD ++WN++I Y GL ++ LS+F M +S + D + +
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
+ CA G +H++ V + + N+L+DMY KC A+ VF
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF------- 354
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
R M +R +++ +MIAG+AR G + LF+EM E
Sbjct: 355 ------------------------REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
PD +T +A++N C R + G VH ++ K + L F
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-----------KENDLGF--------- 430
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
++F S NA++D + K G Q+A L F + K+I+SW ++I GY++N
Sbjct: 431 --DIFVS---------NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYA 479
Query: 320 ELALSMF-LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
ALS+F L + D VL ACASL+ G+ +H I+R G V NS
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
LV+MYAKCG L + + F I KDLVSW M+ +G+HG EA+ LF +M +G++ D
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 599
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
E++F +L CSH GL+DEG+ FF M E + ++H AC+VDML R G + +A
Sbjct: 600 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 659
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
+ A + LL C H D+ V E + LEPE YV+++N+Y + +
Sbjct: 660 ENMPIPPDATI--WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 717
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEM 616
W++ + +RK + +G++K PG SWIEI+ V FV+G++S+P +I L + M
Sbjct: 718 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARM 775
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 158/322 (49%), Gaps = 33/322 (10%)
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
DSN + SL+ Y N A VF + + WN ++ A+ G+ +GLFK+
Sbjct: 128 DSNLGSKLSLM--YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
M S + D +TFS + + + R + G +HGF++KSG+ V NS+++FY K +
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
A ++F+ + +SWN+II+ GY N
Sbjct: 246 VDSARKVFDEMTERDVISWNSIIN-------------------------------GYVSN 274
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G E LS+F+ M + I++D +V CA +++ G+ VHS ++ +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK 436
N+L++MY+KCGDL+ + F + ++ +VS+ SM+ + G A EA+ LF EM G+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 437 PDEVTFTGMLMTCSHLGLIDEG 458
PD T T +L C+ L+DEG
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEG 416
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 167/376 (44%), Gaps = 70/376 (18%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ G + A+ +F EM DR V++ +MI Y+ GL +++ LF M PD ++ +
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
A L+ CA G +H + + + V+N+L+DMY KC +A VF EM
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ ++W +++ Y+ + AL +F + E
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLE------------------------------ 491
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
E + PD+ T + ++ AC G +HG+++++G+ S V NS++ YAK
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC---- 547
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
A++ AHM F K++VSWT MI GY +G
Sbjct: 548 -----------------GALLLAHM----------LFDDIASKDLVSWTVMIAGYGMHGF 580
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-----KMVHSCIIRRGLDKYL 373
G+ A+++F M + I+ D + ++L+AC+ ++ G M H C I ++ Y
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 640
Query: 374 FVGNSLVNMYAKCGDL 389
+V+M A+ GDL
Sbjct: 641 ----CIVDMLARTGDL 652
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 127/309 (41%), Gaps = 67/309 (21%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG-SMR 66
+F + + + A+ G + A +F EM +D ++WN +I YS ++LSLF +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
PD + + L ACA S G IH ++ +GY S VANSL+DMY KC
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
A +FD++A + V+ W MIAG+ G
Sbjct: 552 LAHMLFDDIASKDLVS-------------------------------WTVMIAGYGMHGF 580
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
+ + LF +M ++ + D+ +F +L+ AC+ H ++ GW +
Sbjct: 581 GKEAIALFNQMRQAGIEADEISFVSLLYACS-----------HSGLVDEGWRFF-----N 624
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ---APDKNI 303
I+ K+E + + I+D + GD KA+ + PD I
Sbjct: 625 IMRHECKIEPTVE--------------HYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 304 VSWTSMIVG 312
W +++ G
Sbjct: 671 --WGALLCG 677
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 300 DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
D+++ + + + +GN E A+ + +D +VL CA L GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLC--VSGKWDIDPRTLCSVLQLCADSKSLKDGKE 115
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGR 419
V + I G +G+ L MY CGDL+ ++ F + + + WN ++ G
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175
Query: 420 ANEAMCLFREMVASGVKPDEVTFT 443
+ ++ LF++M++SGV+ D TF+
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFS 199
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/609 (29%), Positives = 303/609 (49%), Gaps = 63/609 (10%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F T I + + G I AR++FD++P WNA+I YS +Q +L ++ +M+++
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
PDSF++ L AC+G SH G +HA V G+ + + V N LI +Y KC + A
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
R VF+ + +PER ++W +++ +A+ GE
Sbjct: 174 RTVFEGL-----------------------------PLPERTIVSWTAIVSAYAQNGEPM 204
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
L +F +M + +PD +++NA T +D+ G +H V+K G
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG------------ 252
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
LE D + N+ A K G A + F + N++ W +
Sbjct: 253 -----LEIEPDLLISLNTMYA--------------KCGQVATAKILFDKMKSPNLILWNA 293
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
MI GY +NG A+ MF +M ++ D + + + ACA + L + ++ + R
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
+F+ ++L++M+AKCG +EG+ L F L++D+V W++M+ +GLHGRA EA+ L+R
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 429 EMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRG 488
M GV P++VTF G+LM C+H G++ EG+ FF M ++ ++ H AC++D+LGR
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRA 472
Query: 489 GYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVM 548
G++ +A + K G + LL AC H + G + L +++P YV
Sbjct: 473 GHLDQAYEVIKCMPVQPG--VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQ 530
Query: 549 LSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNI 608
LSNLY A+ W VR M ++G+ K G SW+E+R + AF G+ S P +I
Sbjct: 531 LSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQ 590
Query: 609 LYFLEIEMR 617
+ ++E ++
Sbjct: 591 VEWIESRLK 599
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 175/424 (41%), Gaps = 87/424 (20%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFD--EMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
+F I A+ R+ AR +F+ +P+R V+W A+++AY+ G ++L +F M
Sbjct: 154 VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R + KPD + + L+A G IHA VV G + SL MY KC +
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
A+ +FD+M N + W N MI+G+A+ G
Sbjct: 274 ATAKILFDKMKSPNLILW-------------------------------NAMISGYAKNG 302
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
+ +F EM +PD + ++ ++AC + ++E
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQ-------------------VGSLEQAR 343
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
S+ + + + D +F S +A+ID K G + A L F + D+++V
Sbjct: 344 SMYEYVGRSDYRDD---VFIS---------SALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
W++MIVGY +G A+S++ M R + +++ +L AC HS ++
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACN-----------HSGMV 440
Query: 366 RRGLDKYLFVGNSLVN----MYAKCGDLEGSA--------LAFCGILEKDLVSWNSMLFA 413
R G + + + +N YA DL G A + C ++ + W ++L A
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 414 FGLH 417
H
Sbjct: 501 CKKH 504
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGS 64
R +F +++ I A+ G + AR +FD DRD V W+AMI Y G ++++SL+ +
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 65 MRISNSKPDSFSYSAALSAC 84
M P+ ++ L AC
Sbjct: 415 MERGGVHPNDVTFLGLLMAC 434
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 310/591 (52%), Gaps = 35/591 (5%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+A +F + + + + WN M ++ +L L+ M P+S+++ L +CA
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G IH V+ G L V SLI MY + + DA KVFD+ + V++ +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ YA+ A ++F +P + ++WN MI+G+A G + L LFK+M ++ +PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+ T +++AC +S + G VH ++ G+ S +++ N
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVN-------------------- 305
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
A+ID + K G+ + A F++ P K+++SW ++I GYT + AL +
Sbjct: 306 -----------ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR--GLDKYLFVGNSLVNMY 383
F +M R+ +++ ++L ACA L + G+ +H I +R G+ + SL++MY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
AKCGD+E + F IL K L SWN+M+F F +HGRA+ + LF M G++PD++TF
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSK 503
G+L CSH G++D G FR+M+ ++ ++ ++H CM+D+LG G EA+ +
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEM 534
Query: 504 TSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAE 563
+ LL AC HG++ G S E L +EPE YV+LSN+Y ++G+W E
Sbjct: 535 EPDGVI--WCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 564 IVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEI 614
R + D+G+KKVPG S IEI +VV F+ G+ P +I +L +E+
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 643
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 158/351 (45%), Gaps = 64/351 (18%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ I A G I +A+KLFDE+P +D V+WNAMI+ Y+ G Y+++L LF M +N +
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD + +SACA G +H + G+ S+L + N+LID+Y KC + A +
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F+ + + ++W +L+ Y + +L+ AL
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALL------------------------------ 353
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK--SGWSSAMEVKNSILS 249
LF+EM S P+ T +++ AC + G +H ++ K G ++A ++ S++
Sbjct: 354 -LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
YAK A ++FNS + SWNA M
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNA-------------------------------M 441
Query: 310 IVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
I G+ +G + + +F M + IQ D++ +L AC+ +L G+ +
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 312/616 (50%), Gaps = 40/616 (6%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F + + +R + ARK+FDEM D V+WN++I +Y+ LG + +L +F
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS-- 217
Query: 66 RISNS---KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
R++N +PD+ + L CA H G +H V S ++ V N L+DMY KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM-PERVE---IAWNTMI 178
+A VF M+ + V+W +++ Y+ F A+ +F M E+++ + W+ I
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 179 AGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWS 238
+G+A+RG LG+ ++M S +P++ T ++++ C +++G +H + IK
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY--- 394
Query: 239 SAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG--DTQKAFLAFQ 296
P D + N G N V N +ID + K DT +A
Sbjct: 395 ------------------PIDLRK--NGHGDENMVI-NQLIDMYAKCKKVDTARAMFDSL 433
Query: 297 QAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL--DNLVAGAVLHACASLAIL 354
++++V+WT MI GY+++G+ AL + +M Q + L ACASLA L
Sbjct: 434 SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 355 AHGKMVHSCIIRRGLDKY-LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
GK +H+ +R + LFV N L++MYAKCG + + L F ++ K+ V+W S++
Sbjct: 494 RIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTG 553
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH 473
+G+HG EA+ +F EM G K D VT +L CSH G+ID+G +F M + FG+S
Sbjct: 554 YGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSP 613
Query: 474 GMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGE 533
G +H AC+VD+LGR G + A L ++ + L C HG + G E
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV--WVAFLSCCRIHGKVELGEYAAE 671
Query: 534 YLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFV 593
+ L + Y +LSNLY +G+WK+ +R M +GVKK PG SW+E T F
Sbjct: 672 KITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFF 731
Query: 594 SGNNSSPYMADISNIL 609
G+ + P+ +I +L
Sbjct: 732 VGDKTHPHAKEIYQVL 747
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 235/507 (46%), Gaps = 58/507 (11%)
Query: 12 TSKIVSLARS-GRICHARKLFDEMPDRDS--VAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
TS ++S S G + HA L P D+ WN++I +Y G + L LFG M
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL 121
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ PD++++ AC S G HAL +V+G+ S++ V N+L+ MY +C DA
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
RKVFDEM+ + V+W S++ +YA +ALE+F M
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF------------------ 223
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
C +PD T ++ C G +H F + S M V N ++
Sbjct: 224 GC------------RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----V 304
YAK +A +F++ + VSWNA++ + ++G + A F++ ++ I V
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
+W++ I GY + G G AL + M + I+ + + +VL CAS+ L HGK +H
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 365 IRRGLD-------KYLFVGNSLVNMYAKCGDLEGSALAFCGI--LEKDLVSWNSMLFAFG 415
I+ +D V N L++MYAKC ++ + F + E+D+V+W M+ +
Sbjct: 392 IKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 416 LHGRANEAMCLFREMVASG--VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH 473
HG AN+A+ L EM +P+ T + L+ C+ L + G + L +
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG-----KQIHAYALRN 506
Query: 474 GMDHVA-----CMVDMLGRGGYVAEAQ 495
+ V C++DM + G +++A+
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDAR 533
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 206/630 (32%), Positives = 307/630 (48%), Gaps = 74/630 (11%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
LF + + A+ G + AR++F+ M DRD+V WN +I +Y ++ LF M +
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL 522
Query: 68 SNSKPDSFSYSAALSACAGGSH-HGF--GSVIHALVVVSGYRSSLPVANSLIDMYGKCLK 124
D ++ L AC +H HG G +H L V G L +SLIDMY KC
Sbjct: 523 CGIVSDGACLASTLKAC---THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 125 PHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARR 184
DARKV F S+PE ++ N +IAG+++
Sbjct: 580 IKDARKV-------------------------------FSSLPEWSVVSMNALIAGYSQN 608
Query: 185 GEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME-V 243
EA + LF+EM P + TF+ ++ AC + + G HG + K G+SS E +
Sbjct: 609 NLEEAVV-LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
S+L Y ++A +F+ + K+I
Sbjct: 668 GISLLGMYMNSRGMTEACALFSELSS------------------------------PKSI 697
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
V WT M+ G+++NG E AL + +M + + D VL C+ L+ L G+ +HS
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK-DLVSWNSMLFAFGLHGRANE 422
I D N+L++MYAKCGD++GS+ F + + ++VSWNS++ + +G A +
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
A+ +F M S + PDE+TF G+L CSH G + +G F M ++G+ +DHVACMV
Sbjct: 818 ALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMV 877
Query: 483 DMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEK 542
D+LGR GY+ EA + + AR + LLGAC HGD G E L LEP+
Sbjct: 878 DLLGRWGYLQEADDFIEAQNLKPDARL--WSSLLGACRIHGDDIRGEISAEKLIELEPQN 935
Query: 543 EVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYM 602
YV+LSN+Y + G W++A +RK M D+GVKKVPG SWI++ F +G+ S +
Sbjct: 936 SSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEI 995
Query: 603 ADISNILYFLEIEMRHTRPINFDI--DGSL 630
I L L M+ +N DI GSL
Sbjct: 996 GKIEMFLEDLYDLMKDDAVVNPDIVEQGSL 1025
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 148/519 (28%), Positives = 245/519 (47%), Gaps = 69/519 (13%)
Query: 15 IVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
IV L A+ ++ +A K FD + ++D AWN+M++ YS +G + L F S+ + P+
Sbjct: 101 IVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPN 159
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
F++S LS CA ++ FG IH ++ G + +L+DMY KC + DAR+VF+
Sbjct: 160 KFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE 219
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSM------PERVE---------------- 171
+ D N V W L Y + L A+ VF M P+ +
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 172 -------------IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
+AWN MI+GH +RG + F M +S + + T ++++A
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
++ G +VH IK G +S + V +S++S Y+K E
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE----------------------- 376
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
K+ K F A ++ KN V W +MI GY NG + +F+DM + +D+
Sbjct: 377 -----KMEAAAKVFEALEE---KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
++L CA+ L G HS II++ L K LFVGN+LV+MYAKCG LE + F
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ ++D V+WN+++ ++ +EA LF+ M G+ D L C+H+ + +G
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
+S + GL + + ++DM + G + +A+ +
Sbjct: 549 KQ-VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 201/435 (46%), Gaps = 63/435 (14%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I + R G++ AR LF EM D VAWN MI+ + G ++ F +MR S+ K
Sbjct: 268 INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+ + LSA ++ G V+HA + G S++ V +SL+ MY KC K A KVF+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE- 386
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
++ E+ ++ WN MI G+A GE + LF
Sbjct: 387 ------------------------------ALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
+M S Y D +TF++L++ C S D+ G H +IK KL
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK-----------------KL 459
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
A N NA++D + K G + A F++ D++ V+W ++I Y
Sbjct: 460 --------------AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
++ N A +F M I D + L AC + L GK VH ++ GLD+ L
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
G+SL++MY+KCG ++ + F + E +VS N+++ + EA+ LF+EM+ G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRG 624
Query: 435 VKPDEVTFTGMLMTC 449
V P E+TF ++ C
Sbjct: 625 VNPSEITFATIVEAC 639
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 216/490 (44%), Gaps = 70/490 (14%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+ S ++ +S + ++ ++ A K+F+ + +++ V WNAMI Y+H G + + LF
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 417
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
M+ S D F++++ LS CA GS H++++ +L V N+L+DMY KC
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
DAR++F+ M D + VTW +++ +Y A ++F+ M + G
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMN----------LCGIVS 527
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G ACL ++ + ACT + G VH +K G +
Sbjct: 528 DG---ACL------------------ASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHT 566
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
+S++ Y+K DA ++F+S ++ VS NA
Sbjct: 567 GSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA-------------------------- 600
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
+I GY++N N E A+ +F +M + + ++ AC L G H
Sbjct: 601 -----LIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQ 654
Query: 364 IIRRGL-DKYLFVGNSLVNMYAKC-GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRAN 421
I +RG + ++G SL+ MY G E AL K +V W M+ +G
Sbjct: 655 ITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYE 714
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVA-- 479
EA+ ++EM GV PD+ TF +L CS L + EG A S F L+H +D +
Sbjct: 715 EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIH---SLIFHLAHDLDELTSN 771
Query: 480 CMVDMLGRGG 489
++DM + G
Sbjct: 772 TLIDMYAKCG 781
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 225/493 (45%), Gaps = 86/493 (17%)
Query: 50 SHLGLYQQSL-------SLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVV 102
SH ++Q+ L LF S ++ + P + + + G +H+ ++
Sbjct: 40 SHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALALRI-----------GKAVHSKSLI 88
Query: 103 SGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEV 162
G S + N+++D+Y KC + A K FD +
Sbjct: 89 LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--------------------------- 121
Query: 163 FRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM 222
E+ AWN+M++ ++ G+ L F + E+ P+++TFS +++ C ++
Sbjct: 122 -----EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNV 176
Query: 223 LYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAH 282
+G +H +IK G +++ YAK + SDA +F N V W + +
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY 236
Query: 283 MKLGDTQKAFLAFQQAPDK-----------------------------------NIVSWT 307
+K G ++A L F++ D+ ++V+W
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWN 296
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
MI G+ + G +A+ F +M ++S++ G+VL A +A L G +VH+ I+
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
GL ++VG+SLV+MY+KC +E +A F + EK+ V WN+M+ + +G +++ M LF
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 428 REMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGR 487
+M +SG D+ TFT +L TC+ ++ G + F S+ + L+ + +VDM +
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 488 GGYVAEAQSLAKK 500
G + +A+ + ++
Sbjct: 476 CGALEDARQIFER 488
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 180/585 (30%), Positives = 301/585 (51%), Gaps = 40/585 (6%)
Query: 31 FDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHH 90
F + +AW ++I ++ L+ ++L+ F MR S PD + + L +C
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 91 GFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL---KPHDARKVFDEMADSNEVTWCSLL 147
FG +H +V G L N+L++MY K L VFDEM + +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 148 FAYANSSLFGM--ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
A FG+ VF MP + +++NT+IAG+A+ G E L + +EM + +PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+T S+++ +E D++ G +HG+VI+ G S + + +S++ YAK D+ +F+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
+ +SWN S++ GY +NG AL +
Sbjct: 302 RLYCRDGISWN-------------------------------SLVAGYVQNGRYNEALRL 330
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
F M ++ + +V+ ACA LA L GK +H ++R G +F+ ++LV+MY+K
Sbjct: 331 FRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSK 390
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
CG+++ + F + D VSW +++ LHG +EA+ LF EM GVKP++V F +
Sbjct: 391 CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 450
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQS-LAKKYSKT 504
L CSH+GL+DE + +F SM+ +GL+ ++H A + D+LGR G + EA + ++K +
Sbjct: 451 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEP 510
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
+G+ + LL +C H +L V E + T++ E YV++ N+Y ++G+WKE
Sbjct: 511 TGS---VWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAK 567
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
+R M +G++K P SWIE++N FVSG+ S P M I+ L
Sbjct: 568 LRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFL 612
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 188/381 (49%), Gaps = 11/381 (2%)
Query: 150 YANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTF 209
Y N L AL +F+++ +AW ++I + L F EM S PD F
Sbjct: 49 YTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVF 108
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGA 269
+++ +CT D+ +G VHGF+++ G + N++++ YAKL + + N F
Sbjct: 109 PSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDE 168
Query: 270 FNQVSWNAIIDAHMKLGDTQKAF------LAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
Q + N+ D +K F F+ P K++VS+ ++I GY ++G E AL
Sbjct: 169 MPQRTSNSG-DEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDAL 227
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
M +M ++ D+ +VL + + GK +H +IR+G+D +++G+SLV+MY
Sbjct: 228 RMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMY 287
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
AK +E S F + +D +SWNS++ + +GR NEA+ LFR+MV + VKP V F+
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSK 503
++ C+HL + G G + + +VDM + G + A+ + + +
Sbjct: 348 SVIPACAHLATLHLG-KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV 406
Query: 504 TSGARTNSYEVLLG-ACHAHG 523
+ +++G A H HG
Sbjct: 407 LDEVSWTA--IIMGHALHGHG 425
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 165/364 (45%), Gaps = 63/364 (17%)
Query: 28 RKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGG 87
R++F+ MP +D V++N +I Y+ G+Y+ +L + M ++ KPDSF+ S+ L +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 88 SHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLL 147
G IH V+ G S + + +SL+DMY K + D+ +VF + + ++W SL+
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 148 FAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQW 207
Y + + AL +FR +M + +P
Sbjct: 316 AGYVQNGRYNEALRLFR-------------------------------QMVTAKVKPGAV 344
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
FS+++ AC + G +HG+V++ G+ S + + ++++ Y+K A ++F+
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
++VSW AI I+G+ +G+G A+S+F
Sbjct: 405 NVLDEVSWTAI-------------------------------IMGHALHGHGHEAVSLFE 433
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHG-KMVHSCIIRRGLDKYLFVGNSLVNMYAKC 386
+M R ++ + + AVL AC+ + ++ +S GL++ L ++ ++ +
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 387 GDLE 390
G LE
Sbjct: 494 GKLE 497
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 31/199 (15%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+S RI + ++F + RD ++WN+++ Y G Y ++L LF M + KP + ++S
Sbjct: 288 AKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFS 347
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ + ACA + G +H V+ G+ S++ +A++L+DMY KC ARK+FD M
Sbjct: 348 SVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVL 407
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+EV+W ++ I GHA G + LF+EM
Sbjct: 408 DEVSWTAI-------------------------------IMGHALHGHGHEAVSLFEEMK 436
Query: 199 ESLYQPDQWTFSALMNACT 217
+P+Q F A++ AC+
Sbjct: 437 RQGVKPNQVAFVAVLTACS 455
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 39/248 (15%)
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSF---GAFNQVSWNAIIDAHMKLGDTQKAFLA 294
SS+ + +++ +++ S A ++ F + + S + +I + L +A L
Sbjct: 2 SSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLL 61
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
F+ +++W S+I +T AL+ F++M + D+ V +VL +C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 355 AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK-----------------------CGD--- 388
G+ VH I+R G+D L+ GN+L+NMYAK GD
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 389 ----------LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
++ F + KD+VS+N+++ + G +A+ + REM + +KPD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 439 EVTFTGML 446
T + +L
Sbjct: 242 SFTLSSVL 249
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F ++ + ++ G I ARK+FD M D V+W A+I ++ G +++SLF M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGS----VIHALVVVSGYRSSLPVANSLIDMYGK 121
+ KP+ ++ A L+AC SH G +++ V G L ++ D+ G+
Sbjct: 436 KRQGVKPNQVAFVAVLTAC---SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 122 CLKPHDARKVFDEM-ADSNEVTWCSLL 147
K +A +M + W +LL
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLL 519
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 286/540 (52%), Gaps = 8/540 (1%)
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
++ L C G IH + ++G+ R + ++N LI MY KC KP DA KVFD+M
Sbjct: 50 ASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
N +W +++ Y S + A VF SMPER ++WNTM+ G+A+ G + L +KE
Sbjct: 110 LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKE 169
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
S + ++++F+ L+ AC +SR + HG V+ +G+ S + + SI+ YAK
Sbjct: 170 FRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
A F+ + W +I + KLGD + A F + P+KN VSWT++I GY R
Sbjct: 230 MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G+G AL +F M ++ + + L A AS+A L HGK +H +IR + V
Sbjct: 290 GSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVI 349
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEK-DLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
+SL++MY+K G LE S F +K D V WN+M+ A HG ++A+ + +M+ V
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
+P+ T +L CSH GL++EG +F SM+ + G+ +H AC++D+LGR G E
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE-- 467
Query: 496 SLAKKYSKTS-GARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYC 554
L +K + + + +LG C HG+ G + L L+PE Y++LS++Y
Sbjct: 468 -LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYA 526
Query: 555 ASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFV--SGNNSSPYMADISNILYFL 612
G+W+ E +R M + V K SWIEI V AF G+++ +I IL+ L
Sbjct: 527 DHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 196/425 (46%), Gaps = 56/425 (13%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
L+ + + +SG + AR +FD MP+RD V+WN M+ Y+ G ++L + R
Sbjct: 113 LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR 172
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
S K + FS++ L+AC H V+V+G+ S++ ++ S+ID Y KC +
Sbjct: 173 SGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMES 232
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A++ FDEM + W +L+ YA A ++F MPE+ ++W +IAG+ R+G
Sbjct: 233 AKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSG 292
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
L LF++M +P+Q+TFS+ + A + +G +HG++I++
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP-------- 344
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSW 306
N + +++ID + K G + + F+ DK + V W
Sbjct: 345 -----------------------NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
+MI ++G G AL M DM + +Q + +L+AC+ HS ++
Sbjct: 382 NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS-----------HSGLVE 430
Query: 367 RGLDKY--LFVGNSLV---NMYAKCGDLEGSALAFCGILEK--------DLVSWNSMLFA 413
GL + + V + +V YA DL G A F ++ K D WN++L
Sbjct: 431 EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490
Query: 414 FGLHG 418
+HG
Sbjct: 491 CRIHG 495
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 310 bits (793), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/612 (30%), Positives = 304/612 (49%), Gaps = 21/612 (3%)
Query: 4 MRSYLFQTTSKIVSL----ARSGRICHARKLFDEMPD---RDSVAWNAMITAYSHLGLYQ 56
+ ++F++ S +L AR G + AR +F+ + D WN+++ A GLY+
Sbjct: 81 LSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYE 140
Query: 57 QSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLI 116
+L L+ MR D + L AC G H V+ G + +L V N L+
Sbjct: 141 NALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELL 200
Query: 117 DMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EI 172
+Y K + DA +F EM N ++W ++ ++ A+++F M E+
Sbjct: 201 TLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEV 260
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
W ++++ H++ G+ E L F M S + + C E + VHG+V
Sbjct: 261 TWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYV 320
Query: 233 IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF 292
IK G+ + +N+++ Y K DA +F SWN++I + + G +A
Sbjct: 321 IKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEAL 380
Query: 293 LAFQQAPD--------KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
F + + N+V+WTS+I G G G+ +L F M + + +++ +
Sbjct: 381 SLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCI 440
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL 404
L CA L L G+ +H +IR + + + V N+LVNMYAKCG L +L F I +KDL
Sbjct: 441 LSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDL 500
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRS 464
+SWNS++ +G+HG A +A+ +F M++SG PD + +L CSH GL+++G F S
Sbjct: 501 ISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYS 560
Query: 465 MSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGD 524
MS FGL +H AC+VD+LGR G++ EA + K + LL +C H +
Sbjct: 561 MSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPME--PKVCVLGALLNSCRMHKN 618
Query: 525 LGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
+ + L LEPE+ Y++LSN+Y A G+W+E+ VR + +KKV GSSWIE
Sbjct: 619 VDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIE 678
Query: 585 IRNVVTAFVSGN 596
++ F SG+
Sbjct: 679 VKKKKYKFSSGS 690
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 298/599 (49%), Gaps = 66/599 (11%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ I A F E + V WN M+ AY L + S +F M+I P+ ++Y
Sbjct: 435 AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYP 494
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ L C G IH+ ++ + ++ + V + LIDMY K K A
Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA---------- 544
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
W +L +A + ++W TMIAG+ + + L F++M
Sbjct: 545 ----W-DILIRFAGKDV----------------VSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+ + D+ + ++AC + + G +H SG+SS + +N++++ Y++
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC---- 639
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
G ++++LAF+Q + ++W +++ G+ ++GN
Sbjct: 640 ---------------------------GKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
E AL +F+ M R I +N G+ + A + A + GK VH+ I + G D V N+
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L++MYAKCG + + F + K+ VSWN+++ A+ HG +EA+ F +M+ S V+P+
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPN 792
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
VT G+L CSH+GL+D+G A+F SM+SE+GLS +H C+VDML R G ++ A+
Sbjct: 793 HVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFI 852
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
++ A + LL AC H ++ G +L LEPE YV+LSNLY S +
Sbjct: 853 QEMPIKPDALV--WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKK 910
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
W ++ R++M ++GVKK PG SWIE++N + +F G+ + P +I YF ++ R
Sbjct: 911 WDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE--YFQDLTKR 967
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 201/440 (45%), Gaps = 67/440 (15%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G + A K+FDEMP+R WN MI + L + LF M N P+ ++S L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 82 SACAGGSHHGFGSV--IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
AC GGS F V IHA ++ G R S V N LID+Y + AR+VFD
Sbjct: 194 EACRGGS-VAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD------ 246
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA-CLGLFKEMC 198
G+ L+ S W MI+G + + E EA + LF +M
Sbjct: 247 -----------------GLRLKDHSS--------WVAMISGLS-KNECEAEAIRLFCDMY 280
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
P + FS++++AC + + G +HG V+K G+SS V N+++S Y L
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
A +F++ + V++N +I+ G ++ G
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLIN-------------------------------GLSQCGY 369
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
GE A+ +F M + ++ D+ +++ AC++ L G+ +H+ + G + +
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L+N+YAKC D+E + F +++V WN ML A+GL + +FR+M + P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 439 EVTFTGMLMTCSHLGLIDEG 458
+ T+ +L TC LG ++ G
Sbjct: 490 QYTYPSILKTCIRLGDLELG 509
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 206/476 (43%), Gaps = 63/476 (13%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
+R+G + AR++FD + +D +W AMI+ S +++ LF M + P +++S
Sbjct: 233 SRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 292
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ LSAC G +H LV+ G+ S V N+L+ +Y
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY------------------- 333
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
F N A +F +M +R + +NT+I G ++ G E + LFK M
Sbjct: 334 ---------FHLGN---LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+PD T ++L+ AC+ + G +H + K G++S +++ ++L+ YAK
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC---- 437
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
D + A F + +N+V W M+V Y +
Sbjct: 438 ---------------------------ADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
+ +F M I + ++L C L L G+ +HS II+ +V +
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L++MYAK G L+ + KD+VSW +M+ + + ++A+ FR+M+ G++ D
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
EV T + C+ L + EG + + G S + +V + R G + E+
Sbjct: 591 EVGLTNAVSACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 44/299 (14%)
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY-TRNGNGELALSMFLDMTRNSIQL 336
+ D ++ GD AF F + P++ I +W MI +RN GE+ +F+ M ++
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEV-FGLFVRMVSENVTP 184
Query: 337 DNLVAGAVLHACASLAI-LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+ VL AC ++ + +H+ I+ +GL V N L+++Y++ G ++ +
Sbjct: 185 NEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV 244
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS----- 450
F G+ KD SW +M+ + EA+ LF +M G+ P F+ +L C
Sbjct: 245 FDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 451 ------------------------------HLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
HLG + F +MS +++
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT----- 359
Query: 481 MVDMLGRGGYVAEAQSLAKK-YSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTL 538
+++ L + GY +A L K+ + +N+ L+ AC A G L G + Y L
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
L G+ +HS I++ GLD + L + Y GDL G+ F + E+ + +WN M+
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTC 449
E LF MV+ V P+E TF+G+L C
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC 196
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/604 (33%), Positives = 306/604 (50%), Gaps = 30/604 (4%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
R+G ARKLFDEMP+RD V+WN MI Y ++ LF M + D S++
Sbjct: 107 RNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM----PERDVCSWNT 162
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA-NSLIDMYGKCLKPHDARKVFDEMADS 138
LS A G V A V V+ N+L+ Y + K +A +F +
Sbjct: 163 MLSGYAQN-----GCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENW 217
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
V+W LL + A + F SM R ++WNT+I G+A+ G+++ LF E
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-- 275
Query: 199 ESLYQPDQWTFSALM-----NACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
S Q D +T++A++ N E L+ M + W N++L+ Y +
Sbjct: 276 -SPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV--SW-------NAMLAGYVQ 324
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY 313
E A E+F+ N +WN +I + + G +A F + P ++ VSW +MI GY
Sbjct: 325 GERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
+++G+ AL +F+ M R +L+ + L CA + L GK +H +++ G +
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
FVGN+L+ MY KCG +E + F + KD+VSWN+M+ + HG A+ F M
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
G+KPD+ T +L CSH GL+D+G +F +M+ ++G+ H ACMVD+LGR G + +
Sbjct: 505 GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
A +L K A + LLGA HG+ + + + +EPE YV+LSNLY
Sbjct: 565 AHNLMKNMPFEPDAAI--WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLY 622
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLE 613
+SG+W + +R M D+GVKKVPG SWIEI+N F G+ P +I L L+
Sbjct: 623 ASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELD 682
Query: 614 IEMR 617
+ M+
Sbjct: 683 LRMK 686
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 223/494 (45%), Gaps = 71/494 (14%)
Query: 36 DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSV 95
D D WN I++Y G ++L +F M + S SY+
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRM----PRWSSVSYNG---------------- 100
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
++SGY + N ++ ARK+FDEM + + V+W ++ Y +
Sbjct: 101 -----MISGY-----LRNGEFEL---------ARKLFDEMPERDLVSWNVMIKGYVRNRN 141
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
G A E+F MPER +WNTM++G+A+ G V+ +F M E + +++AL++A
Sbjct: 142 LGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSA 197
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSW 275
++ M CM+ F + W A+ N +L + K + +A + F+S + VSW
Sbjct: 198 YVQNSKMEEACML--FKSRENW--ALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSW 253
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT-RNSI 334
N II + + G +A F ++P +++ +WT+M+ GY +N E A +F M RN +
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV 313
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
+ ++AG V +A K + + R + + N+++ YA+CG + +
Sbjct: 314 SWNAMLAGYVQGERMEMA-----KELFDVMPCRNVSTW----NTMITGYAQCGKISEAKN 364
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F + ++D VSW +M+ + G + EA+ LF +M G + + +F+ L TC+ +
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVD-----MLGRGGYVAEAQSLAKKYSKTSGART 509
++ G L G C V M + G + EA L + + +G
Sbjct: 425 LELGKQLHGR------LVKGGYETGCFVGNALLLMYCKCGSIEEANDL---FKEMAGKDI 475
Query: 510 NSYEVLLGACHAHG 523
S+ ++ HG
Sbjct: 476 VSWNTMIAGYSRHG 489
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 187/444 (42%), Gaps = 85/444 (19%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I A+SG+I AR+LFDE P +D W AM++ Y + +++ LF M N
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----E 312
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
S++A L+ V G R + A+++FD
Sbjct: 313 VSWNAMLAG-----------------YVQGERMEM------------------AKELFDV 337
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
M N TW +++ YA A +F MP+R ++W MIAG+++ G L LF
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
+M + ++ +FS+ ++ C + + G +HG ++K G+ + V N++L Y K
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 457
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
+A ++F + VSWN +MI GY+
Sbjct: 458 GSIEEANDLFKEMAGKDIVSWN-------------------------------TMIAGYS 486
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
R+G GE+AL F M R ++ D+ AVL AC+ ++ G+ + + Y
Sbjct: 487 RHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ----DYGV 542
Query: 375 VGNS-----LVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
+ NS +V++ + G LE + + E D W ++L A +HG A
Sbjct: 543 MPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA----- 597
Query: 429 EMVASGVKPDEVTFTGMLMTCSHL 452
E A + E +GM + S+L
Sbjct: 598 ETAADKIFAMEPENSGMYVLLSNL 621
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 28/257 (10%)
Query: 232 VIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKA 291
++K G S E +I S+ C ++A+ +F ++ VS+N +I +++ G+ + A
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRC-NEALRVFKRMPRWSSVSYNGMISGYLRNGEFELA 114
Query: 292 FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT-RNSIQLDNLVAGAVLHACAS 350
F + P++++VSW MI GY RN N A +F M R+ + +++G + C
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 351 ---------------------LAILAHGKMVHSCIIRRGLDKYLFVG-NSLVNMYAKCGD 388
A + + KM +C++ + + + V N L+ + K
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
+ + F + +D+VSWN+++ + G+ +EA LF E S V+ D T+T M+
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE---SPVQ-DVFTWTAMVSG 290
Query: 449 CSHLGLIDEGFAFFRSM 465
+++E F M
Sbjct: 291 YIQNRMVEEARELFDKM 307
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 309/604 (51%), Gaps = 35/604 (5%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-R 66
LF S + A G + ARK+FDEM +R+ V+W +MI Y+ + ++ LF M R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
P+S + +SACA G ++A + SG + + ++L+DMY KC
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
A+++FDE SN + C N M + + R+G
Sbjct: 289 VAKRLFDEYGASN-LDLC------------------------------NAMASNYVRQGL 317
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
LG+F M +S +PD+ + + +++C++ R++L+G HG+V+++G+ S + N+
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ Y K A +F+ V+WN+I+ +++ G+ A+ F+ P+KNIVSW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 307 TSMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
++I G + E A+ +F M ++ + D + ++ AC L L K ++ I
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
+ G+ + +G +LV+M+++CGD E + F + +D+ +W + + A + G A A+
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIE 557
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDML 485
LF +M+ G+KPD V F G L CSH GL+ +G F SM G+S H CMVD+L
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 486 GRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG 545
GR G + EA L + + LL AC G++ + E ++ L PE+
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVI--WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 546 YVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
YV+LSN+Y ++G+W + VR M ++G++K PG+S I+IR F SG+ S P M +I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 606 SNIL 609
+L
Sbjct: 736 EAML 739
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 201/488 (41%), Gaps = 94/488 (19%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N++I Y+ GL +++ LF M S PD +++ LSACA G G IH L+V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
GY L V NSL+ Y +C + ARKVFDEM++ N V+W S++ YA A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
+F M E+ P+ T +++AC + D
Sbjct: 222 LFFRMVRDEEVT------------------------------PNSVTMVCVISACAKLED 251
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
+ G V+ F+ SG +EV + ++S A++D
Sbjct: 252 LETGEKVYAFIRNSG----IEVNDLMVS---------------------------ALVDM 280
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
+MK A F + N+ +M Y R G AL +F M + ++ D +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC--------------- 386
+ + +C+ L + GK H ++R G + + + N+L++MY KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 387 ----------------GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
G+++ + F + EK++VSWN+++ EA+ +F M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 431 VAS-GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGG 489
+ GV D VT + C HLG +D + + G+ + +VDM R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCG 519
Query: 490 YVAEAQSL 497
A S+
Sbjct: 520 DPESAMSI 527
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/604 (30%), Positives = 309/604 (51%), Gaps = 35/604 (5%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-R 66
LF S + A G + ARK+FDEM +R+ V+W +MI Y+ + ++ LF M R
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
P+S + +SACA G ++A + SG + + ++L+DMY KC
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
A+++FDE SN + C N M + + R+G
Sbjct: 289 VAKRLFDEYGASN-LDLC------------------------------NAMASNYVRQGL 317
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
LG+F M +S +PD+ + + +++C++ R++L+G HG+V+++G+ S + N+
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ Y K A +F+ V+WN+I+ +++ G+ A+ F+ P+KNIVSW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 307 TSMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
++I G + E A+ +F M ++ + D + ++ AC L L K ++ I
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
+ G+ + +G +LV+M+++CGD E + F + +D+ +W + + A + G A A+
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIE 557
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDML 485
LF +M+ G+KPD V F G L CSH GL+ +G F SM G+S H CMVD+L
Sbjct: 558 LFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLL 617
Query: 486 GRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG 545
GR G + EA L + + LL AC G++ + E ++ L PE+
Sbjct: 618 GRAGLLEEAVQLIEDMPMEPNDVI--WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 546 YVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
YV+LSN+Y ++G+W + VR M ++G++K PG+S I+IR F SG+ S P M +I
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNI 735
Query: 606 SNIL 609
+L
Sbjct: 736 EAML 739
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 201/488 (41%), Gaps = 94/488 (19%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N++I Y+ GL +++ LF M S PD +++ LSACA G G IH L+V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
GY L V NSL+ Y +C + ARKVFDEM++ N V+W S++ YA A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
+F M E+ P+ T +++AC + D
Sbjct: 222 LFFRMVRDEEVT------------------------------PNSVTMVCVISACAKLED 251
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
+ G V+ F+ SG +EV + ++S A++D
Sbjct: 252 LETGEKVYAFIRNSG----IEVNDLMVS---------------------------ALVDM 280
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
+MK A F + N+ +M Y R G AL +F M + ++ D +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC--------------- 386
+ + +C+ L + GK H ++R G + + + N+L++MY KC
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 387 ----------------GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
G+++ + F + EK++VSWN+++ EA+ +F M
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 431 VAS-GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGG 489
+ GV D VT + C HLG +D + + G+ + +VDM R G
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCG 519
Query: 490 YVAEAQSL 497
A S+
Sbjct: 520 DPESAMSI 527
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 182/611 (29%), Positives = 303/611 (49%), Gaps = 66/611 (10%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGS-MR 66
++ TS + ++G + K+F MP+R++ W+ M++ Y+ G ++++ +F +R
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 67 ISNSKPDS-FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
DS + ++A LS+ A + G G IH + + +G + ++N+L+ MY KC
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
++A K+FD D N +T W+ M+ G+++ G
Sbjct: 273 NEACKMFDSSGDRNSIT-------------------------------WSAMVTGYSQNG 301
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
E + LF M + +P ++T ++NAC++ + G +H F++K G+ +
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATT 361
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
+++ YAK C L D +K F Q+ +++
Sbjct: 362 ALVDMYAKAGC----------------------------LADARKGFDCLQE---RDVAL 390
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
WTS+I GY +N + E AL ++ M I ++ +VL AC+SLA L GK VH I
Sbjct: 391 WTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTI 450
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
+ G + +G++L MY+KCG LE L F KD+VSWN+M+ +G+ +EA+
Sbjct: 451 KHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALE 510
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDML 485
LF EM+A G++PD+VTF ++ CSH G ++ G+ +F MS + GL +DH ACMVD+L
Sbjct: 511 LFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLL 570
Query: 486 GRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG 545
R G + EA+ + + G + +LL AC HG G GE L L +
Sbjct: 571 SRAGQLKEAKEFIESANIDHGLCL--WRILLSACKNHGKCELGVYAGEKLMALGSRESST 628
Query: 546 YVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
YV LS +Y A G+ ++ E V K M GV K G SWIE++N FV G+ P + +
Sbjct: 629 YVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET 688
Query: 606 SNILYFLEIEM 616
+++ + +M
Sbjct: 689 KDLVCLVSRQM 699
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 201/445 (45%), Gaps = 67/445 (15%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQS---LSLFGSMRISNSKPDSF 75
A+ G++ A +F+ + +D V+WN++IT YS G S + LF MR + P+++
Sbjct: 60 AKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAY 119
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
+ + A + G HALVV + V SL+ MY K D KVF M
Sbjct: 120 TLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM 179
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
+ N TW +++ +G+A RG VE + +F
Sbjct: 180 PERNTYTWSTMV-------------------------------SGYATRGRVEEAIKVFN 208
Query: 196 EMCESLYQ--PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
+ + F+A++++ + + G +H IK+G + + N++++ Y+K
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY 313
E ++A +MF+S G N ++W+A M+ GY
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSA-------------------------------MVTGY 297
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
++NG A+ +F M I+ VL+AC+ + L GK +HS +++ G +++L
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHL 357
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
F +LV+MYAK G L + F + E+D+ W S++ + + EA+ L+R M +
Sbjct: 358 FATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEG 458
G+ P++ T +L CS L ++ G
Sbjct: 418 GIIPNDPTMASVLKACSSLATLELG 442
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 172/408 (42%), Gaps = 68/408 (16%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G +H ++ +G + + AN L++ Y KC K A +F+ + + V+
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVS---------- 82
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA---CLGLFKEMCESLYQPDQWTF 209
WN++I G+++ G + + + LF+EM P+ +T
Sbjct: 83 ---------------------WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTL 121
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGA 269
+ + A + + G H V+K + V S++ Y K D +++F
Sbjct: 122 AGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE 181
Query: 270 FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDM 329
N +W ++M+ GY G E A+ +F
Sbjct: 182 RNTYTW-------------------------------STMVSGYATRGRVEEAIKVFNLF 210
Query: 330 TRNSIQ--LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
R + + V AVL + A+ + G+ +H I+ GL ++ + N+LV MY+KC
Sbjct: 211 LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCE 270
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLM 447
L + F +++ ++W++M+ + +G + EA+ LF M ++G+KP E T G+L
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330
Query: 448 TCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
CS + ++EG S + G + +VDM + G +A+A+
Sbjct: 331 ACSDICYLEEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 42/231 (18%)
Query: 7 YLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR 66
+LF TT+ + A++G + ARK FD + +RD W ++I+ Y +++L L+ M+
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
+ P+ + ++ L AC+ + G +H + G+ +P+ ++L MY KC
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
D VF R P + ++WN MI+G + G+
Sbjct: 476 DGNLVF-------------------------------RRTPNKDVVSWNAMISGLSHNGQ 504
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW 237
+ L LF+EM +PD TF +++AC+ H ++ GW
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACS-----------HKGFVERGW 544
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 34/227 (14%)
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
P T + ++ R+++ G VHG +I++G S+ ++ N +++FYAK + A +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG---NGE 320
FN AII K++VSW S+I GY++NG +
Sbjct: 72 FN-----------AIIC--------------------KDVVSWNSLITGYSQNGGISSSY 100
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
+ +F +M I + + A +SL G+ H+ +++ ++V SLV
Sbjct: 101 TVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLV 160
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
MY K G +E F + E++ +W++M+ + GR EA+ +F
Sbjct: 161 GMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
L G+ VH IIR G + N LVN YAKCG L + F I+ KD+VSWNS++
Sbjct: 30 LVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITG 89
Query: 414 FGLHGRANEA---MCLFREMVASGVKPDEVTFTGMLMTCSHL 452
+ +G + + M LFREM A + P+ T G+ S L
Sbjct: 90 YSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 184/584 (31%), Positives = 289/584 (49%), Gaps = 63/584 (10%)
Query: 29 KLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGS 88
++FDEMP+RD +WN +I+ + G +++L LFG M S +P+S S + A+SAC+
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 89 HHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLF 148
G IH V G+ V ++L+DMYGKC D EV
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC--------------DCLEV------- 261
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
A EVF+ MP + +AWN+MI G+ +G+ ++C+ + M +P Q T
Sbjct: 262 ----------AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTT 311
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
++++ AC+ SR++L+G +HG+VI+S ++ + V S+
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSL--------------------- 350
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
ID + K G+ A F + SW MI Y GN A+ ++
Sbjct: 351 ----------IDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQ 400
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
M ++ D + +VL AC+ LA L GK +H I L+ + ++L++MY+KCG+
Sbjct: 401 MVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
+ + F I +KD+VSW M+ A+G HG+ EA+ F EM G+KPD VT +L
Sbjct: 461 EKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSA 520
Query: 449 CSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGAR 508
C H GLIDEG FF M S++G+ ++H +CM+D+LGR G + EA + ++ +TS
Sbjct: 521 CGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD-N 579
Query: 509 TNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKE 568
L AC H + G + L P+ Y++L NLY + W A VR +
Sbjct: 580 AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLK 639
Query: 569 MLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFL 612
M + G++K PG SWIE+ + V F + + S ++ L L
Sbjct: 640 MKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 227/501 (45%), Gaps = 68/501 (13%)
Query: 25 CHARKLFDEMPDRDSV-AWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSYSAALS 82
C AR +F+ R V WN++++ YS ++ +L +F + S PDSF++ +
Sbjct: 56 CSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIK 115
Query: 83 ACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVT 142
A G +IH LVV SGY + VA+SL+ MY K
Sbjct: 116 AYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK--------------------- 154
Query: 143 WCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLY 202
+LF +L+VF MPER +WNT+I+ + GE E L LF M S +
Sbjct: 155 ----------FNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGF 204
Query: 203 QPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAME 262
+P+ + + ++AC+ + G +H +K G+ V ++++ Y K +C A E
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 263 MFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELA 322
+F Q+ P K++V+W SMI GY G+ +
Sbjct: 265 VF-------------------------------QKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 323 LSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
+ + M + ++L AC+ L HGK +H +IR ++ ++V SL+++
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
Y KCG+ + F + SWN M+ ++ G +A+ ++ +MV+ GVKPD VTF
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 443 TGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS 502
T +L CS L +++G S+ SE L ++ ++DM + G EA +
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 503 KTSGARTNSYEVLLGACHAHG 523
K S+ V++ A +HG
Sbjct: 473 KKDVV---SWTVMISAYGSHG 490
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A +F + + +WN MI++Y +G + +++ ++ M KPD ++++ L AC+
Sbjct: 363 AETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
+ G IH + S + + ++L+DMY KC +A ++F+ + + V+W +
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVM 482
Query: 147 LFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
+ AY + AL F M P+ V + GHA G ++ L F +M
Sbjct: 483 ISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHA--GLIDEGLKFFSQM 537
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/638 (29%), Positives = 306/638 (47%), Gaps = 49/638 (7%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A KLFDEMP RD +AWN ++ G +++++ LF M+ S +K + L C+
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
G IH V+ G S++ + NSLI MY + K +RKVF+ M D N +W S+
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 147 LFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFKEMCES 200
L +Y A+ + M P+ V WN++++G+A +G + + + K M +
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIV--TWNSLLSGYASKGLSKDAIAVLKRMQIA 219
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
+P + S+L+ A E + G +HG+++++ + V+ +++ Y K A
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 261 MEMFNSFGAFNQVSWNAIIDA-----------------------------------HMKL 285
+F+ A N V+WN+++ + L
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 286 GDTQKAFLAFQQAPDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
G +KA + +K N+VSWT++ G ++NGN AL +F+ M + +
Sbjct: 340 GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATM 399
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE 401
+L L++L GK VH +R+ L +V +LV+MY K GDL+ + F GI
Sbjct: 400 STLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN 459
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
K L SWN ML + + GR E + F M+ +G++PD +TFT +L C + GL+ EG+ +
Sbjct: 460 KSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKY 519
Query: 462 FRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHA 521
F M S +G+ ++H +CMVD+LGR GY+ EA + S A + L +C
Sbjct: 520 FDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATI--WGAFLSSCKI 577
Query: 522 HGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSS 581
H DL + L+ LEP Y+M+ NLY +W++ E +R M + V+ S
Sbjct: 578 HRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWS 637
Query: 582 WIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRHT 619
WI+I V F + + P DI LY L EM+ +
Sbjct: 638 WIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKS 675
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 153/325 (47%), Gaps = 8/325 (2%)
Query: 150 YANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTF 209
Y G A ++F MP+R ++AWN ++ + R G E + LF+EM S + T
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGA 269
L+ C+ G +HG+V++ G S + + NS++ Y++ + ++FNS
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 270 FNQVSWNAIIDAHMKLGDTQKAFLAFQQ------APDKNIVSWTSMIVGYTRNGNGELAL 323
N SWN+I+ ++ KLG A + PD IV+W S++ GY G + A+
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD--IVTWNSLLSGYASKGLSKDAI 210
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
++ M ++ ++L A A L GK +H I+R L ++V +L++MY
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
K G L + + F + K++V+WNS++ +A L M G+KPD +T+
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSE 468
+ + LG ++ M +
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEK 355
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 167/389 (42%), Gaps = 43/389 (11%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDR---------------------------------- 37
S IV +R+G++ +RK+F+ M DR
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLK 187
Query: 38 -DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVI 96
D V WN++++ Y+ GL + ++++ M+I+ KP + S S+ L A A H G I
Sbjct: 188 PDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
H ++ + + V +LIDMY K AR VFD M N V W SL+ + + L
Sbjct: 248 HGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLL 307
Query: 157 GMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
A + M + I WN++ +G+A G+ E L + +M E P+ +++A+
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI 367
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
+ C+++ + V + + G +++L L E+ N
Sbjct: 368 FSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNL 427
Query: 273 VS----WNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
+ A++D + K GD Q A F +K++ SW M++GY G GE ++ F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHG 357
M ++ D + +VL C + ++ G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEG 516
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 127/274 (46%), Gaps = 33/274 (12%)
Query: 225 GCMVHGFVIKSGW-SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHM 283
G +HG +IK G +S V ++ + FY + A ++F+ + ++WN I+ ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
R+GN E A+ +F +M + + +
Sbjct: 66 -------------------------------RSGNWEKAVELFREMQFSGAKAYDSTMVK 94
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
+L C++ A G+ +H ++R GL+ + + NSL+ MY++ G LE S F + +++
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
L SWNS+L ++ G ++A+ L EM G+KPD VT+ +L + GL + A +
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
M GL ++ ++ + G++ +++
Sbjct: 215 RMQIA-GLKPSTSSISSLLQAVAEPGHLKLGKAI 247
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 16/233 (6%)
Query: 357 GKMVHSCIIRRGLDKY-LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
G +H +I+RGLD V ++ + Y +C L + F + ++D ++WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 416 LHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS---EFGLS 472
G +A+ LFREM SG K + T +L CS+ EGFA R + GL
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN----KEGFAEGRQIHGYVLRLGLE 121
Query: 473 HGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVG 532
+ ++ M R G + ++ K ++ +S+ +L + G + +
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSR---KVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLL 178
Query: 533 EYLKT--LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWI 583
+ ++ L+P+ +LS Y + G K+A V K M G+K P +S I
Sbjct: 179 DEMEICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLK--PSTSSI 228
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 197/697 (28%), Positives = 321/697 (46%), Gaps = 109/697 (15%)
Query: 5 RSYLFQTTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+ + FQT K+VSL R G + A ++F+ + + +V ++ M+ ++ + ++L F
Sbjct: 67 QEHFFQT--KLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFV 124
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
MR + +P ++++ L C + G IH L+V SG+ L L +MY KC
Sbjct: 125 RMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR 184
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
+ ++ARKVFD M PER ++WNT++AG+++
Sbjct: 185 QVNEARKVFDRM-------------------------------PERDLVSWNTIVAGYSQ 213
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G L + K MCE +P T +++ A + R + G +HG+ ++SG+ S + +
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 244 K-------------------------------NSILSFYAKLECPSDAMEMFNSF----- 267
NS++ Y + E P +AM +F
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 268 ----------------------GAF------------NQVSWNAIIDAHMKLGDTQKAFL 293
G F N N++I + K + A
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
F + + +VSW +MI+G+ +NG AL+ F M +++ D +V+ A A L+I
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
H K +H ++R LDK +FV +LV+MYAKCG + + L F + E+ + +WN+M+
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH 473
+G HG A+ LF EM +KP+ VTF ++ CSH GL++ G F M + +
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Query: 474 GMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGE 533
MDH MVD+LGR G + EA + N Y +LGAC H ++ E
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPA--VNVYGAMLGACQIHKNVNFAEKAAE 631
Query: 534 YLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFV 593
L L P+ +V+L+N+Y A+ W++ VR ML QG++K PG S +EI+N V +F
Sbjct: 632 RLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFF 691
Query: 594 SGNNSSPYMADISNILYFLEIEMRHTRPINFDIDGSL 630
SG+ + P D I FLE + H + + D +L
Sbjct: 692 SGSTAHP---DSKKIYAFLEKLICHIKEAGYVPDTNL 725
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/622 (29%), Positives = 308/622 (49%), Gaps = 57/622 (9%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK--PDSFSYSAALSA 83
+ARK+FDE+P +S AWN +I AY+ S+ F M +S S+ P+ +++ + A
Sbjct: 82 YARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDM-VSESQCYPNKYTFPFLIKA 140
Query: 84 CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
A S G +H + V S S + VANSLI Y C A KVF + + + V+W
Sbjct: 141 AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSW 200
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
S+ I G ++G + L LFK+M +
Sbjct: 201 NSM-------------------------------INGFVQKGSPDKALELFKKMESEDVK 229
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
T +++AC + R++ +G V ++ ++ + + + N++L Y K DA +
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
F++ + V+W ++D + D + A P K+IV+W ++I Y +NG AL
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 324 SMFLDMT-RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
+F ++ + +++L+ + + L ACA + L G+ +HS I + G+ V ++L++M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
Y+KCGDLE S F + ++D+ W++M+ +HG NEA+ +F +M + VKP+ VTF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 443 TGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS 502
T + CSH GL+DE + F M S +G+ H AC+VD+LGR GY+ +A + +
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE--A 527
Query: 503 KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEA 562
T+ + LLGAC H +L L LEP + +V+LSN+Y G+W+
Sbjct: 528 MPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENV 587
Query: 563 EIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP--------------------YM 602
+RK M G+KK PG S IEI ++ F+SG+N+ P Y
Sbjct: 588 SELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYE 647
Query: 603 ADISNILYFLEIEMRHTRPINF 624
+IS +L +E E + +N
Sbjct: 648 PEISQVLQIIEEEEMKEQSLNL 669
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 163/350 (46%), Gaps = 32/350 (9%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F S I G + A K+F + ++D V+WN+MI + G ++L LF M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
+ K + LSACA + FG + + + + +L +AN+++DMY KC
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
DA+++FD M + + VTW ++L YA S + A EV SMP++ +AWN +I+ + + G
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 186 EVEACLGLFKEM-CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVK 244
+ L +F E+ + + +Q T + ++AC + + G +H ++ K G V
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
++++ Y+K GD +K+ F +++
Sbjct: 404 SALIHMYSK-------------------------------CGDLEKSREVFNSVEKRDVF 432
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
W++MI G +G G A+ MF M +++ + + V AC+ ++
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 199/464 (42%), Gaps = 76/464 (16%)
Query: 145 SLLFAYANSSLFG---MALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC-ES 200
S LFA A S F A +VF +P+ AWNT+I +A + + F +M ES
Sbjct: 66 SKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSES 125
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
P+++TF L+ A E + G +HG +KS S + V NS++ Y A
Sbjct: 126 QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSA 185
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
++F + + VSWN++I+ G+ + G+ +
Sbjct: 186 CKVFTTIKEKDVVSWNSMIN-------------------------------GFVQKGSPD 214
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
AL +F M ++ ++ VL ACA + L G+ V S I ++ L + N+++
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 381 NMYAKCGDLEGSALAFCGILE-------------------------------KDLVSWNS 409
+MY KCG +E + F + E KD+V+WN+
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 410 MLFAFGLHGRANEAMCLFREM-VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
++ A+ +G+ NEA+ +F E+ + +K +++T L C+ +G ++ G + S +
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKK 393
Query: 469 FGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTG 528
G+ + ++ M + G + +++ + ++ + ++G HG
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREV---FNSVEKRDVFVWSAMIGGLAMHG--CGN 448
Query: 529 SSVGEYLKTLEPEKEVGYVMLSNLYCA---SGQWKEAEIVRKEM 569
+V + K E + V +N++CA +G EAE + +M
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/607 (29%), Positives = 306/607 (50%), Gaps = 64/607 (10%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S+ S ++ +S + R G+I + ++F EMP R++V W A+IT H G Y++ L+ F
Sbjct: 138 SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYF 197
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
M S D+++++ AL ACAG +G IH V+V G+ ++L VANSL MY +C
Sbjct: 198 SEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTEC 257
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
EM D L +F +M ER ++W ++I +
Sbjct: 258 ----------GEMQD---------------------GLCLFENMSERDVVSWTSLIVAYK 286
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
R G+ + F +M S P++ TF+++ +AC +++G +H V+ G + ++
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
V NS++ Y+ G+ A + FQ ++
Sbjct: 347 VSNSMMKMYSTC-------------------------------GNLVSASVLFQGMRCRD 375
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
I+SW+++I GY + G GE F M ++ + + ++L ++A++ G+ VH+
Sbjct: 376 IISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHA 435
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE 422
+ GL++ V +SL+NMY+KCG ++ +++ F D+VS +M+ + HG++ E
Sbjct: 436 LALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKE 495
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
A+ LF + + G +PD VTF +L C+H G +D GF +F M + + +H CMV
Sbjct: 496 AIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMV 555
Query: 483 DMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEK 542
D+L R G +++A+ + + S + LL AC A GD+ G E + L+P
Sbjct: 556 DLLCRAGRLSDAEKMINEMSWKKDDVV--WTTLLIACKAKGDIERGRRAAERILELDPTC 613
Query: 543 EVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYM 602
V L+N+Y ++G +EA VRK M +GV K PG S I+I++ V+AFVSG+ P
Sbjct: 614 ATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQS 673
Query: 603 ADISNIL 609
DI NIL
Sbjct: 674 EDIYNIL 680
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 6/197 (3%)
Query: 271 NQVSWNAIIDAHMK----LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF 326
NQV ++H++ G+ + A F + P +IVSWTS+I Y N + AL +F
Sbjct: 35 NQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILF 94
Query: 327 --LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
+ + +++ D V VL AC + +A+G+ +H+ ++ L ++VG+SL++MY
Sbjct: 95 SAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYK 154
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
+ G ++ S F + ++ V+W +++ GR E + F EM S D TF
Sbjct: 155 RVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAI 214
Query: 445 MLMTCSHLGLIDEGFAF 461
L C+ L + G A
Sbjct: 215 ALKACAGLRQVKYGKAI 231
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 284/567 (50%), Gaps = 40/567 (7%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHAL 99
+ WN +I +Y+ L+++ ++ + M +PD+F+Y + L AC FG V+H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMA 159
+ VS Y+SSL V N+LI MY + AR++FD M + + V+W +++ YA+ ++ A
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 160 LEVFRSM----PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
E+F M E I WN + G + G LGL M D + A
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSW 275
C+ + G +HG I S + V+N++++ Y+K +
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCK-------------------- 329
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
D + A + F+Q + ++ +W S+I GY + E A + +M Q
Sbjct: 330 -----------DLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK-YLFVGNSLVNMYAKCGDLEGSAL 394
+++ ++L CA +A L HGK H I+RR K Y + NSLV++YAK G + +
Sbjct: 379 PNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
+ ++D V++ S++ +G G A+ LF+EM SG+KPD VT +L CSH L
Sbjct: 439 VSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKL 498
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS-KTSGARTNSYE 513
+ EG F M E+G+ + H +CMVD+ GR G++A+A+ + K SGA ++
Sbjct: 499 VHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGA---TWA 555
Query: 514 VLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQG 573
LL ACH HG+ G E L ++PE YV+++N+Y A+G W + VR M D G
Sbjct: 556 TLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLG 615
Query: 574 VKKVPGSSWIEIRNVVTAFVSGNNSSP 600
VKK PG +WI+ + + F G+ SSP
Sbjct: 616 VKKDPGCAWIDTDSGFSLFSVGDTSSP 642
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 186/461 (40%), Gaps = 114/461 (24%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S +S L+ + I R + AR+LFD M +RD+V+WNA+I Y+ G++ ++ LF
Sbjct: 174 SYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELF 233
Query: 63 GSM---------------------------------RISN--SKPDSFSYSAALSACAGG 87
M R+ N + D + L AC+
Sbjct: 234 DKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLI 293
Query: 88 SHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLL 147
G IH L + S Y V N+LI MY KC A VF + +++ TW
Sbjct: 294 GAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW---- 349
Query: 148 FAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQW 207
N++I+G+A+ + E L +EM + +QP+
Sbjct: 350 ---------------------------NSIISGYAQLNKSEEASHLLREMLVAGFQPNSI 382
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
T ++++ C ++ +G H ++++ +C D +
Sbjct: 383 TLASILPLCARIANLQHGKEFHCYILRR-------------------KCFKDYTML---- 419
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
WN+++D + K G A ++ V++TS+I GY G G +AL++F
Sbjct: 420 -------WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFK 472
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH---------SCIIRRGLDKYLFVGNS 378
+MTR+ I+ D++ AVL AC +H K+VH C G+ L +
Sbjct: 473 EMTRSGIKPDHVTVVAVLSAC------SHSKLVHEGERLFMKMQC--EYGIRPCLQHFSC 524
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDL-VSWNSMLFAFGLHG 418
+V++Y + G L + + K +W ++L A +HG
Sbjct: 525 MVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 285/544 (52%), Gaps = 36/544 (6%)
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
Y L CA +HA +V G P+AN+L+++YGKC A +VFDE
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDE-- 63
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
MP R IAW +++ + L +F
Sbjct: 64 -----------------------------MPHRDHIAWASVLTALNQANLSGKTLSVFSS 94
Query: 197 MCESL-YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+ S +PD + FSAL+ AC + +G VH I S +++ VK+S++ YAK
Sbjct: 95 VGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCG 154
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
+ A +F+S N +SW A++ + K G ++A F+ P KN+ SWT++I G+ +
Sbjct: 155 LLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQ 214
Query: 316 NGNGELALSMFLDMTRNSIQ-LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
+G G A S+F +M R + LD LV +++ ACA+LA G+ VH +I G D +F
Sbjct: 215 SGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVF 274
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
+ N+L++MYAKC D+ + F + +D+VSW S++ HG+A +A+ L+ +MV+ G
Sbjct: 275 ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
VKP+EVTF G++ CSH+G +++G F+SM+ ++G+ + H C++D+LGR G + EA
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 495 QSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL-KTLEPEKEVGYVMLSNLY 553
++L ++ ++ LL AC G G + ++L + + + Y++LSN+Y
Sbjct: 395 ENLI--HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIY 452
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLE 613
++ W + R+++ + V+K PG S +E+R F +G S P DI +L LE
Sbjct: 453 ASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLE 512
Query: 614 IEMR 617
EMR
Sbjct: 513 EEMR 516
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 202/431 (46%), Gaps = 43/431 (9%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS-KPDSFSYS 78
+ G HA ++FDEMP RD +AW +++TA + L ++LS+F S+ S+ +PD F +S
Sbjct: 50 KCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFS 109
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
A + ACA G +H +VS Y + V +SL+DMY KC + A+ VFD +
Sbjct: 110 ALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK 169
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM- 197
N ++W +++ YA S ALE+FR +P + +W +I+G + G+ +F EM
Sbjct: 170 NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
E + D S+++ AC + G VHG VI G+ S + + N+++ YAK
Sbjct: 230 RERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDV 289
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
A ++F+ + VSW TS+IVG ++G
Sbjct: 290 IAAKDIFSRMRHRDVVSW-------------------------------TSLIVGMAQHG 318
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK-----MVHSCIIRRGLDKY 372
E AL+++ DM + ++ + + +++AC+ + + G+ M IR L Y
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHY 378
Query: 373 LFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
L+++ + G L E L D +W ++L A GR + + +V
Sbjct: 379 ----TCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLV 434
Query: 432 ASGVKPDEVTF 442
+S D T+
Sbjct: 435 SSFKLKDPSTY 445
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 32/207 (15%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ + A+SGR A +LF +P ++ +W A+I+ + G ++ S+F MR
Sbjct: 175 TAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVD 234
Query: 72 P-DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
D S+ + ACA + G +H LV+ G+ S + ++N+LIDMY KC A+
Sbjct: 235 ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKD 294
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
+F M + V+W SL I G A+ G+ E
Sbjct: 295 IFSRMRHRDVVSWTSL-------------------------------IVGMAQHGQAEKA 323
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACT 217
L L+ +M +P++ TF L+ AC+
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACS 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F + + I A+ + A+ +F M RD V+W ++I + G +++L+L+ M
Sbjct: 271 SCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM 330
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGF----GSVIHALVVVSGYRSSLPVANSLIDMYGK 121
KP+ ++ + AC SH GF + ++ G R SL L+D+ G+
Sbjct: 331 VSHGVKPNEVTFVGLIYAC---SHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
Query: 122 CLKPHDARKVFDEMA-DSNEVTWCSLLFA 149
+A + M +E TW +LL A
Sbjct: 388 SGLLDEAENLIHTMPFPPDEPTWAALLSA 416
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/635 (29%), Positives = 322/635 (50%), Gaps = 65/635 (10%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S R + Q I L + G+I ARKLFD +P+RD V W +IT Y LG +++ LF
Sbjct: 41 SSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF 100
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
+ +S+ + +++A +VSGY S + S+ +M
Sbjct: 101 DRV---DSRKNVVTWTA---------------------MVSGYLRSKQL--SIAEM---- 130
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
+F EM + N V+W +++ YA S ALE+F MPER ++WN+M+
Sbjct: 131 --------LFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALV 182
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALM-----NACTESRDMLYGCMVHGFVIKSGW 237
+RG ++ + LF E + + D +++A++ N + L+ CM +I W
Sbjct: 183 QRGRIDEAMNLF----ERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII--SW 236
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
N++++ YA+ +A ++F + SWN +I ++ + KA F +
Sbjct: 237 -------NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDR 289
Query: 298 APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN-SIQLDNLVAGAVLHACASLAILAH 356
P+KN++SWT+MI GY N E AL++F M R+ S++ + ++L AC+ LA L
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG--ILEKDLVSWNSMLFAF 414
G+ +H I + K V ++L+NMY+K G+L + F + ++DL+SWNSM+ +
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVY 409
Query: 415 GLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHG 474
HG EA+ ++ +M G KP VT+ +L CSH GL+++G FF+ + + L
Sbjct: 410 AHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR 469
Query: 475 MDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS--YEVLLGACHAHGDLGTGSSVG 532
+H C+VD+ GR G + + + + AR + Y +L AC+ H ++ V
Sbjct: 470 EEHYTCLVDLCGRAGRLKDVTN----FINCDDARLSRSFYGAILSACNVHNEVSIAKEVV 525
Query: 533 EYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAF 592
+ + + YV++SN+Y A+G+ +EA +R +M ++G+KK PG SW+++ F
Sbjct: 526 KKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLF 585
Query: 593 VSGNNSSPYMADISNILYFLEIEMRHTRPINFDID 627
V G+ S P + +IL L +MR + + D +
Sbjct: 586 VVGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAE 620
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 174/571 (30%), Positives = 300/571 (52%), Gaps = 8/571 (1%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
+ A++G + AR+LF+ MP++D V N+++ Y G +++L LF + S D+
Sbjct: 131 VSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADA 187
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+ + L ACA G IHA +++ G + +SL+++Y KC A + ++
Sbjct: 188 ITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 247
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
+ + ++ + +L+ YAN + +F R I WN+MI+G+ L LF
Sbjct: 248 IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLF 307
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
EM + + D T +A++NAC + G +H K G + V +++L Y+K
Sbjct: 308 NEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKC 366
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
P +A ++F+ +++ + N++I + G A F++ +K+++SW SM G++
Sbjct: 367 GSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFS 426
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
+NG L F M + + D + +V+ ACAS++ L G+ V + GLD
Sbjct: 427 QNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV 486
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
V +SL+++Y KCG +E F +++ D V WNSM+ + +G+ EA+ LF++M +G
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
++P ++TF +L C++ GL++EG F SM + G +H +CMVD+L R GYV EA
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
Query: 495 QSLAKKYS-KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
+L ++ G+ +S +L C A+G G E + LEPE V YV LS ++
Sbjct: 607 INLVEEMPFDVDGSMWSS---ILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIF 663
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
SG W+ + +VRK M + V K PGSSW +
Sbjct: 664 ATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 151/608 (24%), Positives = 254/608 (41%), Gaps = 110/608 (18%)
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLP-VANSLIDMYGKCLKPHDARKVFDEM 135
Y L +C+ + + L++ G+ SS+ VAN L+ MY + K AR +FDEM
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV-------- 187
D N +W +++ Y NS G +L F MPER +WN +++G A+ GE+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 188 -----------------------EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLY 224
E L LFKE+ + D T + ++ AC E +
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKC 205
Query: 225 GCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMK 284
G +H ++ G ++ +S+++ YAK A M + S +A+I +
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 285 LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
G ++ F + ++ ++ W SMI GY N AL +F +M RN + D+ AV
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAV 324
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD---------------- 388
++AC L L GK +H + GL + V ++L++MY+KCG
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDT 384
Query: 389 ---------------LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
++ + F I K L+SWNSM F +G E + F +M
Sbjct: 385 ILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVA- 492
+ DEV+ + ++ C+ + ++ G F + ++ GL + ++D+ + G+V
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEH 503
Query: 493 ------------------------------EAQSLAKKYSKTSGARTN--SYEVLLGACH 520
EA L KK S +G R ++ V+L AC+
Sbjct: 504 GRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMS-VAGIRPTQITFMVVLTACN 562
Query: 521 AHGDLGTGSSVGEYLKT---LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV 577
G + G + E +K P+KE + + +L +G +EA + +EM V
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKE-HFSCMVDLLARAGYVEEAINLVEEM----PFDV 617
Query: 578 PGSSWIEI 585
GS W I
Sbjct: 618 DGSMWSSI 625
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 11 TTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN 69
+S ++ L + G + H R++FD M D V WN+MI+ Y+ G +++ LF M ++
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAG 546
Query: 70 SKPDSFSYSAALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+P ++ L+AC G G + ++ V G+ + ++D+ + +
Sbjct: 547 IRPTQITFMVVLTACNYCGLVEEG-RKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 128 ARKVFDEMA-DSNEVTWCSLL 147
A + +EM D + W S+L
Sbjct: 606 AINLVEEMPFDVDGSMWSSIL 626
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 298 bits (763), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 313/608 (51%), Gaps = 44/608 (7%)
Query: 13 SKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF----GSMRI 67
SK++S R R A +FDE+ R++ ++NA++ AY+ +Y + SLF GS
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 68 SN--SKPDSFSYSAALSACAGGSHHGFGSV---IHALVVVSGYRSSLPVANSLIDMYGKC 122
S+ ++PDS S S L A +G GS+ +H V+ G+ S + V N +I Y KC
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
ARKVFDEM+ ER ++WN+MI+G++
Sbjct: 181 DNIESARKVFDEMS-------------------------------ERDVVSWNSMISGYS 209
Query: 183 RRGEVEACLGLFKEMCE-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAM 241
+ G E C ++K M S ++P+ T ++ AC +S D+++G VH +I++ +
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
+ N+++ FYAK A +F+ + V++ AII +M G ++A F +
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH 361
+ +W +MI G +N + E ++ F +M R + + + ++L + + L GK +H
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 362 SCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRAN 421
+ IR G D ++V S+++ YAK G L G+ F ++ L++W +++ A+ +HG ++
Sbjct: 390 AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSD 449
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACM 481
A LF +M G KPD+VT T +L +H G D F SM +++ + G++H ACM
Sbjct: 450 SACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509
Query: 482 VDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPE 541
V +L R G +++A K A+ + LL GDL + L +EPE
Sbjct: 510 VSVLSRAGKLSDAMEFISKMPIDPIAKV--WGALLNGASVLGDLEIARFACDRLFEMEPE 567
Query: 542 KEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPY 601
Y +++NLY +G+W+EAE+VR +M G+KK+PG+SWIE + +F++ ++S
Sbjct: 568 NTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCER 627
Query: 602 MADISNIL 609
++ I+
Sbjct: 628 SKEMYEII 635
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 213/444 (47%), Gaps = 20/444 (4%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F I + I ARK+FDEM +RD V+WN+MI+ YS G ++ ++ +M
Sbjct: 165 SDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM 224
Query: 66 -RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLK 124
S+ KP+ + + AC S FG +H ++ + + L + N++I Y KC
Sbjct: 225 LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS 284
Query: 125 PHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARR 184
AR +FDEM++ + VT+ +++ Y L A+ +F M WN MI+G +
Sbjct: 285 LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQN 344
Query: 185 GEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVK 244
E + F+EM +P+ T S+L+ + T S ++ G +H F I++G + + V
Sbjct: 345 NHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVT 404
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ------A 298
SI+ YAKL A +F++ + ++W AII A+ GD+ A F Q
Sbjct: 405 TSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTK 464
Query: 299 PDKNIVSWTSMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHG 357
PD V+ T+++ + +G+ ++A +F M T+ I+ G +AC + G
Sbjct: 465 PDD--VTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE-----PGVEHYACMVSVLSRAG 517
Query: 358 KMVHSC--IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE---KDLVSWNSMLF 412
K+ + I + +D V +L+N + GDLE + A + E ++ ++ M
Sbjct: 518 KLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMAN 577
Query: 413 AFGLHGRANEAMCLFREMVASGVK 436
+ GR EA + +M G+K
Sbjct: 578 LYTQAGRWEEAEMVRNKMKRIGLK 601
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 29/249 (11%)
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
D + L+ T R L+ +H ++ + + ++SFY + + A+ +F
Sbjct: 21 DGGAYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVF 80
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALS 324
+ N S+NA++ A+ AF F +SW + S
Sbjct: 81 DEITVRNAFSYNALLIAYTSREMYFDAFSLF--------LSW--------------IGSS 118
Query: 325 MFLDMTRNSIQLDNLVAGAVLHA---CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
+ + ++ + D++ VL A C + + + VH +IR G D +FVGN ++
Sbjct: 119 CY---SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMIT 175
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA-SGVKPDEV 440
Y KC ++E + F + E+D+VSWNSM+ + G + +++ M+A S KP+ V
Sbjct: 176 YYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV 235
Query: 441 TFTGMLMTC 449
T + C
Sbjct: 236 TVISVFQAC 244
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 178/602 (29%), Positives = 295/602 (49%), Gaps = 73/602 (12%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G + AR LFD+ + V WN+MI+ Y+ GL ++L +F SMR++ + S+++
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
+ CA F +H VV G+ + +L+ Y KC DA ++F E+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG 360
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
V ++W MI+G + E + LF EM
Sbjct: 361 NV------------------------------VSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
+P+++T+S ++ A ++ VH V+K+ + + V
Sbjct: 391 KGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGT-------------- 432
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
A++DA++KLG ++A F DK+IV+W++M+ GY + G
Sbjct: 433 -----------------ALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASL-AILAHGKMVHSCIIRRGLDKYLFVGNS 378
E A+ MF ++T+ I+ + ++L+ CA+ A + GK H I+ LD L V ++
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L+ MYAK G++E + F EKDLVSWNSM+ + HG+A +A+ +F+EM VK D
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
VTF G+ C+H GL++EG +F M + ++ +H +CMVD+ R G + +A +
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
+ +G+ + +L AC H G E + ++PE YV+LSN+Y SG
Sbjct: 656 ENMPNPAGSTI--WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRH 618
W+E VRK M ++ VKK PG SWIE++N +F++G+ S P I ++++E
Sbjct: 714 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQI-----YMKLEDLS 768
Query: 619 TR 620
TR
Sbjct: 769 TR 770
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 197/448 (43%), Gaps = 76/448 (16%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
+R Y F T S S R+ +A LFD+ P RD ++ +++ +S G Q++ LF
Sbjct: 29 QVRIYCFGTVS-------SSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLF 81
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
++ + D +S+ L A FG +H + G+ + V SL+D Y K
Sbjct: 82 LNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKG 141
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
D RKVFDEM + N VTW +L I+G+A
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTL-------------------------------ISGYA 170
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
R + L LF M QP+ +TF+A + E G VH V+K+G +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
V NS+++ Y +K G+ +KA + F + K+
Sbjct: 231 VSNSLINLY-------------------------------LKCGNVRKARILFDKTEVKS 259
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
+V+W SMI GY NG AL MF M N ++L +V+ CA+L L + +H
Sbjct: 260 VVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHC 319
Query: 363 CIIRRGLDKYLFVGN---SLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHG 418
+++ G +LF N +L+ Y+KC + + F I ++VSW +M+ F +
Sbjct: 320 SVVKYG---FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGML 446
EA+ LF EM GV+P+E T++ +L
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 106/217 (48%), Gaps = 1/217 (0%)
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
F ++P ++ S+ S++ G++R+G + A +FL++ R +++D + +VL A+L
Sbjct: 50 FDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDE 109
Query: 355 AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAF 414
G+ +H I+ G + VG SLV+ Y K + + F + E+++V+W +++ +
Sbjct: 110 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGY 169
Query: 415 GLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHG 474
+ +E + LF M G +P+ TF L + G+ G ++ + GL
Sbjct: 170 ARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ-VHTVVVKNGLDKT 228
Query: 475 MDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
+ ++++ + G V +A+ L K S NS
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNS 265
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G I A ++F ++D V+WN+MI+ Y+ G ++L +F M+ K D ++
Sbjct: 541 AKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFI 600
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANS-LIDMYGKCLKPHDARKVFDEMAD 137
+AC G ++V + NS ++D+Y + + A KV + M +
Sbjct: 601 GVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPN 660
Query: 138 -SNEVTWCSLLFA---YANSSLFGMALEVFRSM-PE 168
+ W ++L A + + L +A E +M PE
Sbjct: 661 PAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPE 696
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/607 (30%), Positives = 297/607 (48%), Gaps = 46/607 (7%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ + A+ + A+ LFD + + ++NAMIT YS ++L LF + S
Sbjct: 320 TATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLG 379
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
D S S ACA G I+ L + S + VAN+ IDMYGKC +A +V
Sbjct: 380 FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRV 439
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FDEM R ++WN +IA H + G+ L
Sbjct: 440 FDEMR-------------------------------RRDAVSWNAIIAAHEQNGKGYETL 468
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
LF M S +PD++TF +++ ACT + YG +H ++KSG +S V S++ Y
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMY 527
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
+K +A ++ + F F + + + ++ K+ + + + VSW S+I
Sbjct: 528 SKCGMIEEAEKIHSRF--FQRANVSGTMEELEKMHNKRLQEMC---------VSWNSIIS 576
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY E A +F M I D VL CA+LA GK +H+ +I++ L
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 636
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
+++ ++LV+MY+KCGDL S L F L +D V+WN+M+ + HG+ EA+ LF M+
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
+KP+ VTF +L C+H+GLID+G +F M ++GL + H + MVD+LG+ G V
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 492 AEAQSLAKKYSKTSGARTNSYEVLLGACHAH-GDLGTGSSVGEYLKTLEPEKEVGYVMLS 550
A L ++ A + LLG C H ++ L L+P+ Y +LS
Sbjct: 757 KRALELIREMPFE--ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 814
Query: 551 NLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILY 610
N+Y +G W++ +R+ M +KK PG SW+E+++ + F+ G+ + P +I L
Sbjct: 815 NVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELG 874
Query: 611 FLEIEMR 617
+ EM+
Sbjct: 875 LIYSEMK 881
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 215/483 (44%), Gaps = 64/483 (13%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++S + A F+ MP RD V+WN+M++ Y G +S+ +F M + D +++
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
L C+ G IH +VV G + + A++L+DMY K + ++ +VF + +
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
N V+W +++ ++L +AL+ FKEM
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALK-------------------------------FFKEMQ 273
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+ Q +++++ +C ++ G +H +KS +++ V+ + L YAK +
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
DA +F++ N+ S+NA MI GY++ +
Sbjct: 334 DAQILFDNSENLNRQSYNA-------------------------------MITGYSQEEH 362
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
G AL +F + + + D + V ACA + L+ G ++ I+ L + V N+
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
++MY KC L + F + +D VSWN+++ A +G+ E + LF M+ S ++PD
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
E TF +L C+ G + G S+ G++ ++DM + G + EA+ +
Sbjct: 483 EFTFGSILKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKIH 540
Query: 499 KKY 501
++
Sbjct: 541 SRF 543
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 195/420 (46%), Gaps = 34/420 (8%)
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
++S CA G HA +++SG+R + V N L+ +Y A VFD+M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
+ V+W ++ Y+ S+ A F MP R ++WN+M++G+ + GE + +F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+M + D TF+ ++ C+ D G +HG V++ G + + +++L YAK +
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
+++ +F N VSW+AI I G +
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAI-------------------------------IAGCVQ 258
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
N LAL F +M + + + + +VL +CA+L+ L G +H+ ++ V
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
+ ++MYAKC +++ + + F + S+N+M+ + +A+ LF +++SG+
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFF-RSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
DE++ +G+ C+ + + EG + ++ S L + + A +DM G+ +AEA
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEA 436
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 142/310 (45%), Gaps = 6/310 (1%)
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
FS + C + + G H +I SG+ V N +L Y A +F+
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
+ VSWN +I+ + K D KA F P +++VSW SM+ GY +NG ++ +F+
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
DM R I+ D +L C+ L + G +H ++R G D + ++L++MYAK
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLM 447
S F GI EK+ VSW++++ + + A+ F+EM + + +L
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 448 TCSHLGLIDEGFAFF-RSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSG 506
+C+ L + G ++ S+F + G+ A + DM + + +AQ L + +
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFA-ADGIVRTATL-DMYAKCDNMQDAQIL---FDNSEN 344
Query: 507 ARTNSYEVLL 516
SY ++
Sbjct: 345 LNRQSYNAMI 354
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
++S ++ ++ + ++ G + +R +F++ RD V WNAMI Y+H G ++++ LF
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFE 693
Query: 64 SMRISNSKPDSFSYSAALSACA--GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK 121
M + N KP+ ++ + L ACA G G + + G LP ++++D+ GK
Sbjct: 694 RMILENIKPNHVTFISILRACAHMGLIDKGL-EYFYMMKRDYGLDPQLPHYSNMVDILGK 752
Query: 122 CLKPHDARKVFDEMA-DSNEVTWCSLL 147
K A ++ EM ++++V W +LL
Sbjct: 753 SGKVKRALELIREMPFEADDVIWRTLL 779
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 281/565 (49%), Gaps = 38/565 (6%)
Query: 54 LYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVAN 113
L ++++ L G + KP + +Y + C+ G +H + SG+ + + N
Sbjct: 69 LLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 114 SLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIA 173
L+ MY KC DARKVFDEM + + +W ++ YA L A ++F M E+ +
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS 184
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCE-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
W M+ G+ ++ + E L L+ M +P+ +T S + A + + G +HG +
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 233 IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF 292
+++G S ++V W++++D + K G +A
Sbjct: 245 VRAGLDS-------------------------------DEVLWSSLMDMYGKCGCIDEAR 273
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
F + +K++VSWTSMI Y ++ S+F ++ + + + VL+ACA L
Sbjct: 274 NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 353 ILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLF 412
GK VH + R G D Y F +SLV+MY KCG++E + G + DLVSW S++
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 393
Query: 413 AFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLS 472
+G+ +EA+ F ++ SG KPD VTF +L C+H GL+++G FF S++ + LS
Sbjct: 394 GCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 453
Query: 473 HGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVG 532
H DH C+VD+L R G + +S+ + + +LG C +G++
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFL--WASVLGGCSTYGNIDLAEEAA 511
Query: 533 EYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAF 592
+ L +EPE V YV ++N+Y A+G+W+E +RK M + GV K PGSSW EI+ F
Sbjct: 512 QELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVF 571
Query: 593 VSGNNSSPYMADISNILYFLEIEMR 617
++ + S P I L L +M+
Sbjct: 572 IAADTSHPMYNQIVEFLRELRKKMK 596
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 175/405 (43%), Gaps = 95/405 (23%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM------------- 65
A+ G + ARK+FDEMP+RD +WN M+ Y+ +GL +++ LF M
Sbjct: 131 AKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVT 190
Query: 66 -------------------RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYR 106
R+ NS+P+ F+ S A++A A G IH +V +G
Sbjct: 191 GYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 107 SSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM 166
S + +SL+DMYGKC +AR +FD++ + + V+W S++ Y SS +
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW---------- 300
Query: 167 PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGC 226
R G LF E+ S +P+++TF+ ++NAC + G
Sbjct: 301 ----------------REG-----FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGK 339
Query: 227 MVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG 286
VHG++ + G+ SF + ++++D + K G
Sbjct: 340 QVHGYMTRVGFDPY-------------------------SFAS------SSLVDMYTKCG 368
Query: 287 DTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH 346
+ + A P ++VSWTS+I G +NG + AL F + ++ + D++ VL
Sbjct: 369 NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Query: 347 ACASLAILAHG-KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
AC ++ G + +S + L LV++ A+ G E
Sbjct: 429 ACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFE 473
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 292/609 (47%), Gaps = 66/609 (10%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ IVS G + AR LFDEMPDRD VAW AMIT Y+ ++ F M +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P+ F+ S+ L +C +G+++H +VV G SL V N++++MY C +A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA--- 165
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
A +FR + + ++ W T+I G G+ L
Sbjct: 166 ---------------------------ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGL 198
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
++K+M + + + + A + G +H VIK G+ S + V NSIL Y
Sbjct: 199 KMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLY 258
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
+ S+A F + DK++++W ++I
Sbjct: 259 CRCGYLSEAKHY-------------------------------FHEMEDKDLITWNTLIS 287
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
R+ + E AL MF + +++ ACA++A L G+ +H I RRG +K
Sbjct: 288 ELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEK-DLVSWNSMLFAFGLHGRANEAMCLFREM 430
+ + N+L++MYAKCG++ S F I+++ +LVSW SM+ +G HG EA+ LF +M
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
V+SG++PD + F +L C H GL+++G +F M SE+G++ D C+VD+LGR G
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 491 VAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSV-GEYLKTLEPEKEVGYVML 549
+ EA L ++ T + +LGAC AH G S + + L+P+ YVML
Sbjct: 467 IGEAYELVERMPFKPDEST--WGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 550 SNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
S +Y A G+W + VRK M G KK G SWI + N V +F + P + + ++L
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Query: 610 YFLEIEMRH 618
L E R
Sbjct: 585 GLLIEETRE 593
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/606 (29%), Positives = 297/606 (49%), Gaps = 68/606 (11%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I S + GR+ A KLF+ MP+++ ++W +++ Y L+++++ LF SM KPD
Sbjct: 291 IDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDM 350
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
++ S+ L++CA GFG+ +HA + + + V NSLIDMY KC DARKVFD
Sbjct: 351 YACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD- 409
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG---EVEACL 191
+FA A+ LF N MI G++R G E+ L
Sbjct: 410 ------------IFAAADVVLF------------------NAMIEGYSRLGTQWELHEAL 439
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
+F++M L +P TF +L+ A + +HG + K G + + ++++ Y
Sbjct: 440 NIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVY 499
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
+ C D+ L F + K++V W SM
Sbjct: 500 SNCYCLKDSR-------------------------------LVFDEMKVKDLVIWNSMFA 528
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY + E AL++FL++ + + D ++ A +LA + G+ H +++RGL+
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLEC 588
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
++ N+L++MYAKCG E + AF +D+V WNS++ ++ HG +A+ + +M+
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMM 648
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
+ G++P+ +TF G+L CSH GL+++G F M FG+ +H CMV +LGR G +
Sbjct: 649 SEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRL 707
Query: 492 AEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSN 551
+A+ L +K A + LL C G++ E +P+ + MLSN
Sbjct: 708 NKARELIEKMPTKPAAIV--WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSN 765
Query: 552 LYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYF 611
+Y + G W EA+ VR+ M +GV K PG SWI I V F+S + S I +L
Sbjct: 766 IYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDD 825
Query: 612 LEIEMR 617
L +++R
Sbjct: 826 LLVQIR 831
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 204/444 (45%), Gaps = 63/444 (14%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G I +AR +FD +P++ +V W MI+ +G SL LF + N PD + S
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
LSAC+ G IHA ++ G + N LID Y KC + A K+F+
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN------ 308
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
MP + I+W T+++G+ + + + LF M +
Sbjct: 309 -------------------------GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
+PD + S+++ +C + +G VH + IK+ + V NS++ YAK +C +D
Sbjct: 344 FGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD 403
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
A ++F+ F A + V +NA+I+ + +LG W
Sbjct: 404 ARKVFDIFAAADVVLFNAMIEGYSRLG-----------------TQW------------- 433
Query: 320 EL--ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
EL AL++F DM I+ L ++L A ASL L K +H + + GL+ +F G+
Sbjct: 434 ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGS 493
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
+L+++Y+ C L+ S L F + KDLV WNSM + EA+ LF E+ S +P
Sbjct: 494 ALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERP 553
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAF 461
DE TF M+ +L + G F
Sbjct: 554 DEFTFANMVTAAGNLASVQLGQEF 577
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/440 (27%), Positives = 210/440 (47%), Gaps = 68/440 (15%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSY 77
+R+G + +ARK+F++MP+R+ V+W+ M++A +H G+Y++SL +F R P+ +
Sbjct: 90 SRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYIL 149
Query: 78 SAALSACAGGSHHGFGSV--IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
S+ + AC+G G V + + +V SG+ + V LID Y K AR VFD +
Sbjct: 150 SSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDAL 209
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
+ + VT W TMI+G + G L LF
Sbjct: 210 PEKSTVT-------------------------------WTTMISGCVKMGRSYVSLQLFY 238
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
++ E PD + S +++AC+ + G +H +++ G +E+ S++
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG----LEMDASLM------- 287
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
N +ID+++K G A F P+KNI+SWT+++ GY +
Sbjct: 288 --------------------NVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
N + A+ +F M++ ++ D ++L +CASL L G VH+ I+ L +V
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAF---GLHGRANEAMCLFREMVA 432
NSL++MYAKC L + F D+V +N+M+ + G +EA+ +FR+M
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 433 SGVKPDEVTFTGMLMTCSHL 452
++P +TF +L + L
Sbjct: 448 RLIRPSLLTFVSLLRASASL 467
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 163/364 (44%), Gaps = 65/364 (17%)
Query: 92 FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYA 151
+ +V+H ++V G ++N LI++Y + ARKVF++M
Sbjct: 62 YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM---------------- 105
Query: 152 NSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ-PDQWTFS 210
PER ++W+TM++ G E L +F E + P+++ S
Sbjct: 106 ---------------PERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILS 150
Query: 211 ALMNACT--ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
+ + AC+ + R + F++KSG+ + V ++ FY
Sbjct: 151 SFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY----------------- 193
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
+K G+ A L F P+K+ V+WT+MI G + G ++L +F
Sbjct: 194 --------------LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
+ +++ D + VL AC+ L L GK +H+ I+R GL+ + N L++ Y KCG
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
+ + F G+ K+++SW ++L + + EAM LF M G+KPD + +L +
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 449 CSHL 452
C+ L
Sbjct: 360 CASL 363
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 149/334 (44%), Gaps = 38/334 (11%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGL---YQQSLSLFGSM 65
+ T S I A+ + ARK+FD D V +NAMI YS LG ++L++F M
Sbjct: 386 YVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R +P ++ + L A A + G IH L+ G + ++LID+Y C
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
D+R VFDEM + V W N+M AG+ ++
Sbjct: 506 KDSRLVFDEMKVKDLVIW-------------------------------NSMFAGYVQQS 534
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
E E L LF E+ S +PD++TF+ ++ A + G H ++K G + N
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQ----QAPDK 301
++L YAK P DA + F+S + + V WN++I ++ G+ +KA + + +
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N +++ ++ + G E L F M R I+
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLRFGIE 688
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N +I+ + + G A F++ P++N+VSW++M+ +G E +L +FL+ R
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 336 LDN-LVAGAVLHACASLAILAHGK----MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
N + + + AC+ L G+ + S +++ G D+ ++VG L++ Y K G+++
Sbjct: 143 SPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID 200
Query: 391 GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS 450
+ L F + EK V+W +M+ GR+ ++ LF +++ V PD + +L CS
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACS 260
Query: 451 HLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
L + EG + +GL + ++D + G V A L
Sbjct: 261 ILPFL-EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
+L AS +L + +VH II GL+ ++ N L+N+Y++ G + + F + E++
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVK-PDEVTFTGMLMTCSHL 452
LVSW++M+ A HG E++ +F E + P+E + + CS L
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL 159
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/588 (28%), Positives = 290/588 (49%), Gaps = 65/588 (11%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A +GR A +F +MP +D ++WN+++ ++ + G +L L SM S + +++
Sbjct: 290 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 349
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+AL+AC G ++H LVVVSG + + N+L+ MYGK + ++R+V +M
Sbjct: 350 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM--- 406
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
P R +AWN +I G+A + + L F+ M
Sbjct: 407 ----------------------------PRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 199 ESLYQPDQWTFSALMNACTESRDML-YGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
+ T ++++AC D+L G +H +++ +G+ S VKNS+++ YAK
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 498
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
S + ++FN ++NI++W +M+ +G
Sbjct: 499 SSSQDLFNGL-------------------------------DNRNIITWNAMLAANAHHG 527
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
+GE L + M + LD L A A LA+L G+ +H ++ G + F+ N
Sbjct: 528 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 587
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
+ +MY+KCG++ + + L SWN ++ A G HG E F EM+ G+KP
Sbjct: 588 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKP 647
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
VTF +L CSH GL+D+G A++ ++ +FGL ++H C++D+LGR G +AEA++
Sbjct: 648 GHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETF 707
Query: 498 AKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASG 557
K + LL +C HG+L G E L LEPE + YV+ SN++ +G
Sbjct: 708 ISKMPMKPNDLV--WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 765
Query: 558 QWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
+W++ E VRK+M + +KK SW+++++ V++F G+ + P +I
Sbjct: 766 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEI 813
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 227/521 (43%), Gaps = 67/521 (12%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+ S L S I L G + +A +FD+M +RD+++WN++ AY+ G ++S +F
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
MR + + +S + S LS H +G IH LVV G+ S + V N+L+ MY
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
+ +A VF + MP + I+WN+++A
Sbjct: 294 RSVEANLVF-------------------------------KQMPTKDLISWNSLMASFVN 322
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G LGL M S + TF++ + AC G ++HG V+ SG +
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
N+++S Y K+ S++ + + V+WNA+I + + D KA AFQ
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ------- 435
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA-ILAHGKMVHS 362
T + G + N + +VL AC +L GK +H+
Sbjct: 436 ---TMRVEGVSSN---------------------YITVVSVLSACLLPGDLLERGKPLHA 471
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE 422
I+ G + V NSL+ MYAKCGDL S F G+ +++++WN+ML A HG E
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 531
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
+ L +M + GV D+ +F+ L + L +++EG ++ + G H
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAA 590
Query: 483 DMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
DM + G + E + K + S+ +L+ A HG
Sbjct: 591 DMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRHG 628
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 189/428 (44%), Gaps = 62/428 (14%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G + +RK+F+EMPDR+ V+W +++ YS G ++ + ++ MR + S S +
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
S+C G I VV SG S L V NSLI M G A +FD+M+
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS----- 205
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
ER I+WN++ A +A+ G +E +F M
Sbjct: 206 --------------------------ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
+ + T S L++ +G +HG V+K G+ S + V N++L YA
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA--------- 290
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
GA G + +A L F+Q P K+++SW S++ + +G
Sbjct: 291 ------GA----------------GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 328
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
AL + M + ++ + + L AC + G+++H ++ GL +GN+LV+
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MY K G++ S + +D+V+WN+++ + ++A+ F+ M GV + +T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 442 FTGMLMTC 449
+L C
Sbjct: 449 VVSVLSAC 456
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 208/465 (44%), Gaps = 64/465 (13%)
Query: 34 MPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA-GGSHHGF 92
MP R+ V+WN M++ +GLY + + F M KP SF ++ ++AC GS
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G +H V SG S + V+ +++ +YG +RKVF+EM D N V+W SL+ Y++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
+++++ M RGE C ++ + S +
Sbjct: 121 KGEPEEVIDIYKGM-----------------RGEGVGC--------------NENSMSLV 149
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
+++C +D G + G V+KSG S + V+NS++S + A +F+ +
Sbjct: 150 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDT 209
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
+SWN+I A Y +NG+ E + +F M R
Sbjct: 210 ISWNSIAAA-------------------------------YAQNGHIEESFRIFSLMRRF 238
Query: 333 SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGS 392
++++ +L + G+ +H +++ G D + V N+L+ MYA G +
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
L F + KDL+SWNS++ +F GR+ +A+ L M++SG + VTFT L C
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 453 GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
++G + GL + +V M G+ G ++E++ +
Sbjct: 359 DFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
S I A+ G + ++ LF+ + +R+ + WNAM+ A +H G ++ L L MR
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
D FS+S LSA A + G +H L V G+ + N+ DMY KC + + K+
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 605
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
+ V RS+P +WN +I+ R G E
Sbjct: 606 --------------------------LPPSVNRSLP-----SWNILISALGRHGYFEEVC 634
Query: 192 GLFKEMCESLYQPDQWTFSALMNACT 217
F EM E +P TF +L+ AC+
Sbjct: 635 ATFHEMLEMGIKPGHVTFVSLLTACS 660
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/597 (30%), Positives = 290/597 (48%), Gaps = 70/597 (11%)
Query: 23 RICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSYSAAL 81
R+ ARK+FD MP++D++ WN MI+ Y +Y +S+ +F + S ++ D+ + L
Sbjct: 169 RVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
A A G IH+L +G S V I +Y KC K
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK----------------- 271
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
M +FR + +A+N MI G+ GE E L LFKE+ +
Sbjct: 272 --------------IKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKEL---M 314
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
+ S L++ S ++ +HG+ +KS + S V ++ + Y+KL A
Sbjct: 315 LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
++F+ ++P+K++ SW +MI GYT+NG E
Sbjct: 375 KLFD-------------------------------ESPEKSLPSWNAMISGYTQNGLTED 403
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A+S+F +M ++ + + +L ACA L L+ GK VH + + ++V +L+
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MYAKCG + + F + +K+ V+WN+M+ +GLHG+ EA+ +F EM+ SG+ P VT
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
F +L CSH GL+ EG F SM +G + H ACMVD+LGR G++ A +
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGY-VMLSNLYCASGQWK 560
S G+ + +E LLGAC H D +V E L L+P+ VGY V+LSN++ A +
Sbjct: 584 SIEPGS--SVWETLLGACRIHKDTNLARTVSEKLFELDPDN-VGYHVLLSNIHSADRNYP 640
Query: 561 EAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
+A VR+ + + K PG + IEI F SG+ S P + +I L LE +MR
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMR 697
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 183/431 (42%), Gaps = 71/431 (16%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ G+I LF E D VA+NAMI Y+ G + SLSLF + +S ++ S S
Sbjct: 267 SKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS---S 323
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+S H IH + S + S V+ +L +Y K + ARK+FDE +
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEK 383
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ +W +++ Y + L E + LF+EM
Sbjct: 384 SLPSWNAMISGYTQNGL-------------------------------TEDAISLFREMQ 412
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+S + P+ T + +++AC + + G VH V + + S++ V +++ YAK +
Sbjct: 413 KSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIA 472
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
+A +F+ N+V+WN +MI GY +G
Sbjct: 473 EARRLFDLMTKKNEVTWN-------------------------------TMISGYGLHGQ 501
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGN 377
G+ AL++F +M + I + VL+AC+ ++ G + + +I R G + +
Sbjct: 502 GQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYA 561
Query: 378 SLVNMYAKCGDLEGSALAFCGI--LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
+V++ + G L+ AL F +E W ++L A +H N A + ++ +
Sbjct: 562 CMVDILGRAGHLQ-RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--L 618
Query: 436 KPDEVTFTGML 446
PD V + +L
Sbjct: 619 DPDNVGYHVLL 629
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 139/300 (46%), Gaps = 35/300 (11%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL-YQPDQWTFSALMNACT 217
A ++F S+ +N ++ G + + L +F + +S +P+ T++ ++A +
Sbjct: 71 ARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
RD G ++HG + G S + + ++I+ Y K W
Sbjct: 131 GFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKF--------------------W-- 168
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS-IQL 336
++ D +K F + P+K+ + W +MI GY +N ++ +F D+ S +L
Sbjct: 169 ------RVEDARKVF---DRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE-GSALA 395
D +L A A L L G +HS + G + +V +++Y+KCG ++ GSAL
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL- 278
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
F + D+V++N+M+ + +G ++ LF+E++ SG + T ++ HL LI
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S ++ +T+ I A+ G I AR+LFD M ++ V WN MI+ Y G Q++L++F M
Sbjct: 453 SSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEM 512
Query: 66 RISNSKPDSFSYSAALSAC--AGGSHHG---FGSVIHALVVVSGYRSSLPVANSLIDMYG 120
S P ++ L AC AG G F S+IH G+ S+ ++D+ G
Sbjct: 513 LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRY----GFEPSVKHYACMVDILG 568
Query: 121 KCLKPHDARKVFDEMA-DSNEVTWCSLLFA 149
+ A + + M+ + W +LL A
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 106/215 (49%), Gaps = 8/215 (3%)
Query: 292 FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS-IQLDNLVAGAVLHACAS 350
FL+ Q+ PD + + ++ G++ N + +LS+F + +++ ++ ++ + A +
Sbjct: 75 FLSVQR-PD--VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASG 131
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSM 410
G+++H + G D L +G+++V MY K +E + F + EKD + WN+M
Sbjct: 132 FRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTM 191
Query: 411 LFAFGLHGRANEAMCLFREMV-ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEF 469
+ + + E++ +FR+++ S + D T +L + L + G S++++
Sbjct: 192 ISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ-IHSLATKT 250
Query: 470 GLSHGMDHVAC-MVDMLGRGGYVAEAQSLAKKYSK 503
G + D+V + + + G + +L +++ K
Sbjct: 251 G-CYSHDYVLTGFISLYSKCGKIKMGSALFREFRK 284
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 170/588 (28%), Positives = 289/588 (49%), Gaps = 65/588 (11%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A +GR A +F +MP +D ++WN+++ ++ + G +L L SM S + +++
Sbjct: 307 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 366
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+AL+AC G ++H LVVVSG + + N+L+ MYGK EM++S
Sbjct: 367 SALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK----------IGEMSES 416
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
V MP R +AWN +I G+A + + L F+ M
Sbjct: 417 RRV---------------------LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 199 ESLYQPDQWTFSALMNACTESRDML-YGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
+ T ++++AC D+L G +H +++ +G+ S VKNS+++ YAK
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 515
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
S + ++FN ++NI++W +M+ +G
Sbjct: 516 SSSQDLFNGL-------------------------------DNRNIITWNAMLAANAHHG 544
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
+GE L + M + LD L A A LA+L G+ +H ++ G + F+ N
Sbjct: 545 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFN 604
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
+ +MY+KCG++ + + L SWN ++ A G HG E F EM+ G+KP
Sbjct: 605 AAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKP 664
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
VTF +L CSH GL+D+G A++ ++ +FGL ++H C++D+LGR G +AEA++
Sbjct: 665 GHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETF 724
Query: 498 AKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASG 557
K + LL +C HG+L G E L LEPE + YV+ SN++ +G
Sbjct: 725 ISKMPMKPNDLV--WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 782
Query: 558 QWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
+W++ E VRK+M + +KK SW+++++ V++F G+ + P +I
Sbjct: 783 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEI 830
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 227/521 (43%), Gaps = 67/521 (12%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+ S L S I L G + +A +FD+M +RD+++WN++ AY+ G ++S +F
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
MR + + +S + S LS H +G IH LVV G+ S + V N+L+ MY
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
+ +A VF + MP + I+WN+++A
Sbjct: 311 RSVEANLVF-------------------------------KQMPTKDLISWNSLMASFVN 339
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G LGL M S + TF++ + AC G ++HG V+ SG +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
N+++S Y K+ S++ + + V+WNA+I + + D KA AFQ
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ------- 452
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA-ILAHGKMVHS 362
T + G + N + +VL AC +L GK +H+
Sbjct: 453 ---TMRVEGVSSN---------------------YITVVSVLSACLLPGDLLERGKPLHA 488
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE 422
I+ G + V NSL+ MYAKCGDL S F G+ +++++WN+ML A HG E
Sbjct: 489 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 548
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
+ L +M + GV D+ +F+ L + L +++EG ++ + G H
Sbjct: 549 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG-QQLHGLAVKLGFEHDSFIFNAAA 607
Query: 483 DMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
DM + G + E + K + S+ +L+ A HG
Sbjct: 608 DMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRHG 645
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/477 (26%), Positives = 216/477 (45%), Gaps = 64/477 (13%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
GR+ AR LFD MP R+ V+WN M++ +GLY + + F M KP SF ++ +
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 82 SACA-GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE 140
+AC GS G +H V SG S + V+ +++ +YG +RKVF+EM D N
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCES 200
V+W SL+ Y++ +++++ M RGE C
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGM-----------------RGEGVGC---------- 158
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
++ + S ++++C +D G + G V+KSG S + V+NS++S + A
Sbjct: 159 ----NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYA 214
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
+F+ + +SWN+I A Y +NG+ E
Sbjct: 215 NYIFDQMSERDTISWNSIAAA-------------------------------YAQNGHIE 243
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
+ +F M R ++++ +L + G+ +H +++ G D + V N+L+
Sbjct: 244 ESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLL 303
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
MYA G + L F + KDL+SWNS++ +F GR+ +A+ L M++SG + V
Sbjct: 304 RMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYV 363
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
TFT L C ++G + GL + +V M G+ G ++E++ +
Sbjct: 364 TFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 189/428 (44%), Gaps = 62/428 (14%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G + +RK+F+EMPDR+ V+W +++ YS G ++ + ++ MR + S S +
Sbjct: 108 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
S+C G I VV SG S L V NSLI M G A +FD+M+
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS----- 222
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
ER I+WN++ A +A+ G +E +F M
Sbjct: 223 --------------------------ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 256
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
+ + T S L++ +G +HG V+K G+ S + V N++L YA
Sbjct: 257 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYA--------- 307
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
GA G + +A L F+Q P K+++SW S++ + +G
Sbjct: 308 ------GA----------------GRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 345
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
AL + M + ++ + + L AC + G+++H ++ GL +GN+LV+
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MY K G++ S + +D+V+WN+++ + ++A+ F+ M GV + +T
Sbjct: 406 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 465
Query: 442 FTGMLMTC 449
+L C
Sbjct: 466 VVSVLSAC 473
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
S I A+ G + ++ LF+ + +R+ + WNAM+ A +H G ++ L L MR
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
D FS+S LSA A + G +H L V G+ + N+ DMY KC + + K+
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 622
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
+ V RS+P +WN +I+ R G E
Sbjct: 623 --------------------------LPPSVNRSLP-----SWNILISALGRHGYFEEVC 651
Query: 192 GLFKEMCESLYQPDQWTFSALMNACT 217
F EM E +P TF +L+ AC+
Sbjct: 652 ATFHEMLEMGIKPGHVTFVSLLTACS 677
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 105/234 (44%), Gaps = 8/234 (3%)
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
+ K G + A F P +N VSW +M+ G R G + F M I+ + V
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 342 GAVLHACA-SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL 400
+++ AC S ++ G VH + + GL ++V +++++Y G + S F +
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 401 EKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFA 460
++++VSW S++ + G E + +++ M GV +E + + ++ +C L DE
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK--DESLG 179
Query: 461 FFRSMSSEF---GLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
R + + GL + ++ MLG G V A + + S+ NS
Sbjct: 180 --RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 231
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 192/613 (31%), Positives = 297/613 (48%), Gaps = 72/613 (11%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
++ S I +R + +AR LFDEMP RD +WNAMI+ Y G +++L+L +R
Sbjct: 185 VYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR- 243
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
DS + + LSAC G IH+ + G S L V+N LID+Y + + D
Sbjct: 244 ---AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
+KVFD M Y R I+WN++I + +
Sbjct: 301 CQKVFDRM--------------YV-----------------RDLISWNSIIKAYELNEQP 329
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW-SSAMEVKNS 246
+ LF+EM S QPD T +L + ++ D+ V GF ++ GW + + N+
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ YAKL L D+ +A F P+ +++SW
Sbjct: 390 VVVMYAKL-----------------------------GLVDSARA--VFNWLPNTDVISW 418
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRN-SIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
++I GY +NG A+ M+ M I + +VL AC+ L G +H ++
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
+ GL +FV SL +MY KCG LE + F I + V WN+++ G HG +A+
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVM 538
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDML 485
LF+EM+ GVKPD +TF +L CSH GL+DEG F M +++G++ + H CMVDM
Sbjct: 539 LFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMY 598
Query: 486 GRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG 545
GR G + A K S A + LL AC HG++ G E+L +EPE VG
Sbjct: 599 GRAGQLETALKFIKSMSLQPDASI--WGALLSACRVHGNVDLGKIASEHLFEVEPE-HVG 655
Query: 546 Y-VMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMAD 604
Y V+LSN+Y ++G+W+ + +R +G++K PG S +E+ N V F +GN + P +
Sbjct: 656 YHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEE 715
Query: 605 ISNILYFLEIEMR 617
+ L L+ +++
Sbjct: 716 MYRELTALQAKLK 728
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 239/568 (42%), Gaps = 111/568 (19%)
Query: 12 TSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
++K+V+L G + AR FD + +RD AWN MI+ Y G + + F +S+
Sbjct: 89 SAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSG 148
Query: 71 -KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
PD ++ + L AC G+ IH L + G+ + VA SLI +Y + +AR
Sbjct: 149 LTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNAR 205
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
+FDE MP R +WN MI+G+ + G +
Sbjct: 206 ILFDE-------------------------------MPVRDMGSWNAMISGYCQSGNAKE 234
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
L L L D T +L++ACTE+ D G +H + IK G S + V N ++
Sbjct: 235 ALTL----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
YA+ D ++F+ + +SWN+II A
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA---------------------------- 322
Query: 310 IVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG- 368
Y N A+S+F +M + IQ D L ++ + L + + V +R+G
Sbjct: 323 ---YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
+ + +GN++V MYAK G ++ + F + D++SWN+++ + +G A+EA+ ++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 429 EMVASG-VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGR 487
M G + ++ T+ +L CS G + +G + GL + V + DM G+
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGK 498
Query: 488 GGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYV 547
G + +A SL + + + N+ L ACH
Sbjct: 499 CGRLEDALSLFYQIPRVNSVPWNT----LIACHGF------------------------- 529
Query: 548 MLSNLYCASGQWKEAEIVRKEMLDQGVK 575
G ++A ++ KEMLD+GVK
Sbjct: 530 --------HGHGEKAVMLFKEMLDEGVK 549
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 183/424 (43%), Gaps = 66/424 (15%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSL 61
H + S LF + I A GR+ +K+FD M RD ++WN++I AY +++SL
Sbjct: 276 HGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISL 335
Query: 62 FGSMRISNSKPDSFSYSAALSACAG-GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYG 120
F MR+S +PD + + S + G SV + + + + N+++ MY
Sbjct: 336 FQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYA 395
Query: 121 KCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAG 180
K AR VF+ + +++ ++W +++ YA + A+E++ M E EIA N
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN----- 450
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
Q T+ +++ AC+++ + G +HG ++K+G
Sbjct: 451 -------------------------QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD 300
+ V S+ Y K DA+ +F N V WN +I H
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH------------------ 527
Query: 301 KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
G+ +G+GE A+ +F +M ++ D++ +L AC+ ++ G+
Sbjct: 528 -----------GF--HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 361 HSCI-IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG--ILEKDLVSWNSMLFAFGLH 417
+ G+ L +V+MY + G LE +AL F L+ D W ++L A +H
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLE-TALKFIKSMSLQPDASIWGALLSACRVH 633
Query: 418 GRAN 421
G +
Sbjct: 634 GNVD 637
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 193/680 (28%), Positives = 319/680 (46%), Gaps = 104/680 (15%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F +S I + G+I KLFD + +D V WN M+ Y+ G + F MR+
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
P++ ++ LS CA G +H LVVVSG + NSL+ MY KC + DA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
K+F M+ ++ VTW N MI+G+ + G +E
Sbjct: 294 SKLFRMMSRADTVTW-------------------------------NCMISGYVQSGLME 322
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
L F EM S PD TFS+L+ + ++ ++ Y +H ++++ S + + ++++
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG---DTQKAF---LAFQQAPDKN 302
Y K S A +F+ + + V + A+I ++ G D+ + F + + +P++
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 303 IVSWTSMIVG---------------------------------YTRNGNGELALSMFLDM 329
+ ++G Y + G LA +F +
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 330 TRNSI-----------QLDNLVAG--------------------AVLHACASLAILAHGK 358
++ I Q DN A A L ACA+L + GK
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 359 MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
+H +I+ L ++ ++L++MYAKCG+L+ + F + EK++VSWNS++ A G HG
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHG 622
Query: 419 RANEAMCLFREMV-ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDH 477
+ +++CLF EMV SG++PD++TF ++ +C H+G +DEG FFRSM+ ++G+ +H
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682
Query: 478 VACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKT 537
AC+VD+ GR G + EA K A + LLGAC H ++ L
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSMPFPPDAGV--WGTLLGACRLHKNVELAEVASSKLMD 740
Query: 538 LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNN 597
L+P YV++SN + + +W+ VR M ++ V+K+PG SWIEI FVSG+
Sbjct: 741 LDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDV 800
Query: 598 SSPYMADISNILYFLEIEMR 617
+ P + I ++L L E+R
Sbjct: 801 NHPESSHIYSLLNSLLGELR 820
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/508 (21%), Positives = 211/508 (41%), Gaps = 74/508 (14%)
Query: 11 TTSKIVSL-ARSGRICHARKLFDEMPDRDSV--AWNAMITAYSHLGLYQQSLSLFGSMRI 67
T +I+ + A G K+F + R S WN++I+++ GL Q+L+ + M
Sbjct: 72 TDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLC 131
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
PD ++ + AC + + +S SSL +
Sbjct: 132 FGVSPDVSTFPCLVKACVALKN------FKGIDFLSDTVSSLGM---------------- 169
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
D NE SL+ AY + ++F + ++ + WN M+ G+A+ G +
Sbjct: 170 ---------DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
++ + F M P+ TF +++ C + G +HG V+ SG +KNS+
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
LS Y+K DA ++F + V+WN
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNC------------------------------ 310
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
MI GY ++G E +L+ F +M + + D + ++L + + L + K +H I+R
Sbjct: 311 -MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH 369
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
+ +F+ ++L++ Y KC + + F D+V + +M+ + +G +++ +F
Sbjct: 370 SISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF 429
Query: 428 REMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD---HVAC-MVD 483
R +V + P+E+T +L L + G R + F + G D ++ C ++D
Sbjct: 430 RWLVKVKISPNEITLVSILPVIGILLALKLG----RELHG-FIIKKGFDNRCNIGCAVID 484
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGARTNS 511
M + G + A + ++ SK NS
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNS 512
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 165/400 (41%), Gaps = 65/400 (16%)
Query: 55 YQQSLSLFGSMR-ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVAN 113
Y++SL L S R + + P S L AC+ + G +HA ++V+
Sbjct: 17 YKKSLPLRNSSRFLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDE 74
Query: 114 SLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIA 173
++ MY C D K+F L++ RS
Sbjct: 75 RILGMYAMCGSFSDCGKMF-------------------------YRLDLRRSSIR----P 105
Query: 174 WNTMIAGHARRGEVEACLGL-FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
WN++I+ R G + L FK +C + PD TF L+ AC ++ G
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGV-SPDVSTFPCLVKACVALKNF------KGID 158
Query: 233 IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF 292
S S++ ++C N+ +++I A+++ G
Sbjct: 159 FLSDTVSSL-----------GMDC--------------NEFVASSLIKAYLEYGKIDVPS 193
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
F + K+ V W M+ GY + G + + F M + I + + VL CAS
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 353 ILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLF 412
++ G +H ++ G+D + NSL++MY+KCG + ++ F + D V+WN M+
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 413 AFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
+ G E++ F EM++SGV PD +TF+ +L + S
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 148/338 (43%), Gaps = 40/338 (11%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSL 61
HS+ +F T++ I + + + A+ +F + D V + AMI+ Y H GLY SL +
Sbjct: 369 HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEM 428
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK 121
F + P+ + + L G +H ++ G+ + + ++IDMY K
Sbjct: 429 FRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAK 488
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGH 181
C + + A ++F+ ++ + V+W S++ A S A+++FR M
Sbjct: 489 CGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM--------------- 533
Query: 182 ARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAM 241
G C D + SA ++AC +G +HGF+IK +S +
Sbjct: 534 ---GVSGICY-------------DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA---HMKLGDTQKAFLAFQQA 298
+++++ YAK AM +F + N VSWN+II A H KL D+ F +
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEK 637
Query: 299 ----PDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
PD+ +++ +I G+ + + F MT +
Sbjct: 638 SGIRPDQ--ITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF--CGILE 401
+L AC++ +L GK VH+ +I + + ++ MYA CG F +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
+ WNS++ +F +G N+A+ + +M+ GV PD TF ++ C L +G F
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KGIDF 159
Query: 462 FRSMSSEFGL 471
S G+
Sbjct: 160 LSDTVSSLGM 169
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/606 (29%), Positives = 294/606 (48%), Gaps = 73/606 (12%)
Query: 25 CHARKL------FDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
C R+L F+E+P++DSV +N +IT Y GLY +S+ LF MR S +P F++S
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFS 254
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
L A G G +HAL V +G+ V N ++D Y K + + R +FDEM +
Sbjct: 255 GVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL 314
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ V++ ++ +Y+ + + +L FR M C+G +
Sbjct: 315 DFVSYNVVISSYSQADQYEASLHFFREM----------------------QCMGFDRR-- 350
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+ F+ +++ + G +H + + S + V NS++ YAK E
Sbjct: 351 -------NFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
+A +F S VSW T++I GY + G
Sbjct: 404 EAELIFKSLPQRTTVSW-------------------------------TALISGYVQKGL 432
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
L +F M ++++ D VL A AS A L GK +H+ IIR G + +F G+
Sbjct: 433 HGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG 492
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
LV+MYAKCG ++ + F + +++ VSWN+++ A +G A+ F +M+ SG++PD
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPD 552
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
V+ G+L CSH G +++G +F++MS +G++ H ACM+D+LGR G AEA+ L
Sbjct: 553 SVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKE-VGYVMLSNLYCASG 557
+ + +L AC H + E L ++E ++ YV +SN+Y A+G
Sbjct: 613 DEMPFEPDEIM--WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAG 670
Query: 558 QWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFL--EIE 615
+W++ V+K M ++G+KKVP SW+E+ + + F S + + P +I + L EIE
Sbjct: 671 EWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Query: 616 MRHTRP 621
+P
Sbjct: 731 REGYKP 736
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 234/540 (43%), Gaps = 86/540 (15%)
Query: 11 TTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
T + I ++G + AR LFD MPDR V W ++ Y+ + ++ LF M S+S
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 71 --KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSS--LPVANSLIDMYGKCLKPH 126
PD +++ L C +HA V G+ ++ L V+N L+ Y + +
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
A +F+E+ + + VT+ +L+ Y L+ ++
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIH------------------------- 236
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
LF +M +S +QP +TFS ++ A D G +H + +G+S V N
Sbjct: 237 ------LFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQ 290
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
IL FY+K H ++ +T+ + F + P+ + VS+
Sbjct: 291 ILDFYSK----------------------------HDRVLETR---MLFDEMPELDFVSY 319
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
+I Y++ E +L F +M N +L A+L+ L G+ +H +
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAF---GLHGRANEA 423
D L VGNSLV+MYAKC E + L F + ++ VSW +++ + GLHG
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG---AG 436
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV---AC 480
+ LF +M S ++ D+ TF +L + + G + + + S +++V +
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLG----KQLHAFIIRSGNLENVFSGSG 492
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTG-SSVGEYLKTLE 539
+VDM + G + +A + ++ + S+ L+ AH D G G +++G + K +E
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEMPDRNAV---SWNALIS---AHADNGDGEAAIGAFAKMIE 546
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 193/438 (44%), Gaps = 41/438 (9%)
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
+ A ++ +G+ + +N +++ + + ARKV+DEM N V+ +++ + +
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE--SLYQPDQWTFSALM 213
A ++F +MP+R + W ++ +AR + LF++MC S PD TF+ L+
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 214 NACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV 273
C ++ VH F +K G+ + F V
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDT----------------------------NPFLTV 186
Query: 274 SWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
S N ++ ++ ++ A + F++ P+K+ V++ ++I GY ++G ++ +FL M ++
Sbjct: 187 S-NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSA 393
Q + VL A L A G+ +H+ + G + VGN +++ Y+K + +
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305
Query: 394 LAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLG 453
+ F + E D VS+N ++ ++ + ++ FREM G F ML ++L
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLS 365
Query: 454 LIDEGFAFFRSMSSE--FGLSHGMDHVA-CMVDMLGRGGYVAEAQSLAKKYSKTSGARTN 510
+ G R + + + + HV +VDM + EA+ + K + + T
Sbjct: 366 SLQMG----RQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRT---TV 418
Query: 511 SYEVLLGACHAHGDLGTG 528
S+ L+ G G G
Sbjct: 419 SWTALISGYVQKGLHGAG 436
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G I A ++F+EMPDR++V+WNA+I+A++ G + ++ F M S +PDS S
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 79 AALSACAGGSHHGF----GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
L+AC SH GF A+ + G ++D+ G+ + +A K+ DE
Sbjct: 558 GVLTAC---SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 135 MA-DSNEVTWCSLLFA---YANSSLFGMALEVFRSMPE-RVEIAWNTMIAGHARRGEVEA 189
M + +E+ W S+L A + N SL A E SM + R A+ +M +A GE E
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 190 CLGLFKEMCE 199
+ K M E
Sbjct: 675 VRDVKKAMRE 684
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 180/595 (30%), Positives = 292/595 (49%), Gaps = 68/595 (11%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A K+FD MP+R+ V+W+A+++ + G + SLSLF M P+ F++S L AC
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
+ G IH + G+ + V NSL+DMY KC + ++A KVF
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVF-------------- 165
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCES--LYQP 204
R + +R I+WN MIAG G L F M E+ +P
Sbjct: 166 -----------------RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERP 208
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
D++T ++L+ AC+ + + G +HGF+++SG+ CPS A
Sbjct: 209 DEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF-----------------HCPSSA---- 247
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALS 324
+++D ++K G A AF Q +K ++SW+S+I+GY + G A+
Sbjct: 248 --------TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR--RGLDKYLFVGNSLVNM 382
+F + + Q+D+ +++ A A+L GK + + ++ GL+ + NS+V+M
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDM 357
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
Y KCG ++ + F + KD++SW ++ +G HG +++ +F EM+ ++PDEV +
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 443 TGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS 502
+L CSH G+I EG F + G+ ++H AC+VD+LGR G + EA+ L +
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLID--T 475
Query: 503 KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEA 562
++ LL C HGD+ G VG+ L ++ + YVM+SNLY +G W E
Sbjct: 476 MPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQ 535
Query: 563 EIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
R+ +G+KK G SW+EI V F SG +S P I L E +R
Sbjct: 536 GNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLR 590
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 223/494 (45%), Gaps = 82/494 (16%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G +H ++ SG +L +N LIDMY KC +P
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL-------------------------- 58
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
MA +VF SMPER ++W+ +++GH G+++ L LF EM P+++TFS
Sbjct: 59 -----MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTN 113
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
+ AC + G +HGF +K G+ +EV NS++ Y+K ++A ++F +
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSL 173
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
+SWNA MI G+ G G AL F M
Sbjct: 174 ISWNA-------------------------------MIAGFVHAGYGSKALDTFGMMQEA 202
Query: 333 SIQ--LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL--DKYLFVGNSLVNMYAKCGD 388
+I+ D ++L AC+S ++ GK +H ++R G + SLV++Y KCG
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
L + AF I EK ++SW+S++ + G EAM LF+ + + D + ++
Sbjct: 263 LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGV 322
Query: 449 CSHLGLIDEGFAFFRSMSS-EFGLSHGMDH--VACMVDMLGRGGYVAEAQSLAKKYSKTS 505
+ L+ +G + M + L G++ + +VDM + G V EA+ K +++
Sbjct: 323 FADFALLRQG----KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE---KCFAEMQ 375
Query: 506 GARTNSYEVLLGACHAHGDLGTGSS--VGEYLK-TLEPEKEVGYVMLSNLYCASGQWKEA 562
S+ V++ HG LG S E L+ +EP+ EV Y+ + + SG KE
Sbjct: 376 LKDVISWTVVITGYGKHG-LGKKSVRIFYEMLRHNIEPD-EVCYLAVLSACSHSGMIKEG 433
Query: 563 EIVRKEMLD-QGVK 575
E + ++L+ G+K
Sbjct: 434 EELFSKLLETHGIK 447
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 68/406 (16%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK--PDSFS 76
++ GRI A K+F + DR ++WNAMI + H G ++L FG M+ +N K PD F+
Sbjct: 153 SKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFT 212
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYR--SSLPVANSLIDMYGKCLKPHDARKVFDE 134
++ L AC+ G IH +V SG+ SS + SL+D+Y KC ARK FD+
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
+ + ++W SL+ Y A+ GE +GLF
Sbjct: 273 IKEKTMISWSSLILGY-------------------------------AQEGEFVEAMGLF 301
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
K + E Q D + S+++ + + G + +K S +E S+L
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK--LPSGLE--TSVL------ 351
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
N+++D ++K G +A F + K+++SWT +I GY
Sbjct: 352 ---------------------NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR-RGLDKYL 373
++G G+ ++ +F +M R++I+ D + AVL AC+ ++ G+ + S ++ G+ +
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 374 FVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFGLHG 418
+V++ + G L E L ++ ++ W ++L +HG
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 12 TSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
T +V L + G + ARK FD++ ++ ++W+++I Y+ G + +++ LF ++ NS
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVV--VSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ DSF+ S+ + A + G + AL V SG +S V NS++DMY KC +A
Sbjct: 310 QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGLVDEA 367
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM----PERVEIAWNTMIAGHARR 184
K F EM + ++W ++ Y L ++ +F M E E+ + +++ +
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 185 GEVEACLGLFKEMCES 200
G ++ LF ++ E+
Sbjct: 428 GMIKEGEELFSKLLET 443
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
Q NLV+ +L C + G VH +++ G L N L++MY KC + +
Sbjct: 5 QRQNLVS--ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F + E+++VSW++++ L+G ++ LF EM G+ P+E TF+ L C L
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
+++G + G ++ +VDM + G + EA+ + ++
Sbjct: 123 LEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRR 167
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 301/622 (48%), Gaps = 76/622 (12%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F + + + G++ ++ L RD V WN ++++ ++L M +
Sbjct: 237 FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSG-YRSSLPVANSLIDMYGKCLKPHD 127
+PD F+ S+ L AC+ G +HA + +G + V ++L+DMY C +
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
R+VFD M D G+ WN MIAG+++
Sbjct: 357 GRRVFDGMFDRK----------------IGL---------------WNAMIAGYSQNEHD 385
Query: 188 EACLGLFKEMCESL-YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
+ L LF M ES + T + ++ AC S +HGFV+K G V+N+
Sbjct: 386 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNT 445
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ Y++L AM +F K+ D +++V+W
Sbjct: 446 LMDMYSRLGKIDIAMRIFG------------------KMED-------------RDLVTW 474
Query: 307 TSMIVGYTRNGNGELALSMFLDM-----------TRNSIQLDNLVAGAVLHACASLAILA 355
+MI GY + + E AL + M +R S++ +++ +L +CA+L+ LA
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 356 HGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
GK +H+ I+ L + VG++LV+MYAKCG L+ S F I +K++++WN ++ A+G
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 416 LHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGM 475
+HG EA+ L R M+ GVKP+EVTF + CSH G++DEG F M ++G+
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 476 DHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL 535
DH AC+VD+LGR G + EA L + + ++ LLGA H +L G + L
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFN-KAGAWSSLLGASRIHNNLEIGEIAAQNL 713
Query: 536 KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSG 595
LEP YV+L+N+Y ++G W +A VR+ M +QGV+K PG SWIE + V FV+G
Sbjct: 714 IQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAG 773
Query: 596 NNSSPYMADISNILYFLEIEMR 617
++S P +S L L MR
Sbjct: 774 DSSHPQSEKLSGYLETLWERMR 795
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 200/462 (43%), Gaps = 82/462 (17%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
W ++ + L ++++ + M + KPD++++ A L A A G IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 102 VSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMAL 160
GY S+ VAN+L+++Y KC KVFD +++ N+V+W SL+ + + + MAL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 161 EVFRSM-PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE- 218
E FR M E VE P +T +++ AC+
Sbjct: 185 EAFRCMLDENVE--------------------------------PSSFTLVSVVTACSNL 212
Query: 219 --SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWN 276
++ G VH + ++ G ++ + N++++ Y KL + + + SFG + V+WN
Sbjct: 213 PMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
++ + +N AL +M ++
Sbjct: 272 TVLSS-------------------------------LCQNEQLLEALEYLREMVLEGVEP 300
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRG-LDKYLFVGNSLVNMYAKCGDLEGSALA 395
D +VL AC+ L +L GK +H+ ++ G LD+ FVG++LV+MY C +
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS-GVKPDEVTFTGMLMTCSHLGL 454
F G+ ++ + WN+M+ + + EA+ LF M S G+ + T G++ C G
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG- 419
Query: 455 IDEGFAFFRSMSSE-FGLSHGMDH----VACMVDMLGRGGYV 491
AF R + F + G+D ++DM R G +
Sbjct: 420 -----AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 12/211 (5%)
Query: 292 FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASL 351
F++ ++P+ W ++ R+ A+ ++DM I+ DN A+L A A L
Sbjct: 55 FISQSRSPE----WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADL 110
Query: 352 AILAHGKMVHSCIIR--RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNS 409
+ GK +H+ + + G+D + V N+LVN+Y KCGD F I E++ VSWNS
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 410 MLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEF 469
++ + + A+ FR M+ V+P T ++ CS+L + EG + + + +
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHA-Y 227
Query: 470 GLSHGMDH---VACMVDMLGRGGYVAEAQSL 497
GL G + + +V M G+ G +A ++ L
Sbjct: 228 GLRKGELNSFIINTLVAMYGKLGKLASSKVL 258
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 184/609 (30%), Positives = 286/609 (46%), Gaps = 79/609 (12%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T I RS R+ A LFDEMP RD V+WN+MI+ G ++ LF M +
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM----PE 125
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
S++A ++ C +RS K A ++
Sbjct: 126 RSVVSWTAMVNGC--------------------FRSG---------------KVDQAERL 150
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F +M + W S++ Y AL++F+ MP + I+W TMI G + L
Sbjct: 151 FYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEAL 210
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
LFK M + F+ ++ AC + G VHG +IK G+ V S+++FY
Sbjct: 211 DLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFY 270
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
A + ++GD++K F + + + WT+++
Sbjct: 271 ANCK----------------------------RIGDSRKVF---DEKVHEQVAVWTALLS 299
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY+ N E ALS+F M RNSI + + L++C++L L GK +H ++ GL+
Sbjct: 300 GYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET 359
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
FVGNSLV MY+ G++ + F I +K +VSWNS++ HGR A +F +M+
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMI 419
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH---GMDHVACMVDMLGRG 488
+PDE+TFTG+L CSH G +++G F MSS G++H + H CMVD+LGR
Sbjct: 420 RLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSS--GINHIDRKIQHYTCMVDILGRC 477
Query: 489 GYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVM 548
G + EA+ L ++ + LL AC H D+ G + L+ + YV+
Sbjct: 478 GKLKEAEELIERMVVKPNEMV--WLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 549 LSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNI 608
LSN+Y ++G+W +R +M G+ K PGSSW+ IR F SG+ P+ + I
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEK 593
Query: 609 LYFLEIEMR 617
L FL +++
Sbjct: 594 LEFLREKLK 602
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 31/209 (14%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
+ + S I A RI +RK+FDE W A+++ YS ++ +LS+F M +
Sbjct: 261 YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ P+ ++++ L++C+ +G +H + V G + V NSL+ MY +DA
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
VF +++F+ + ++WN++I G A+ G +
Sbjct: 381 VSVF---------------------------IKIFK----KSIVSWNSIIVGCAQHGRGK 409
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACT 217
+F +M +PD+ TF+ L++AC+
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACS 438
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDM-TRNSIQ 335
+I H+ +A F Q P ++ +T MI GYTR+ AL++F +M R+ +
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 336 LDNLVAGAV----LHACASL-------AILAHGKMVHSCIIRRGLDK--YLFVG------ 376
+++++G V ++ L ++++ MV+ C +D+ LF
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 377 ---NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
NS+V+ Y + G ++ + F + K+++SW +M+ + R+ EA+ LF+ M+
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 434 GVKPDEVTFTGMLMTCS-----HLGLIDEGF 459
+K FT ++ C+ H+G+ G
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGL 250
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 178/601 (29%), Positives = 290/601 (48%), Gaps = 63/601 (10%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP-DSFSY 77
A+ R+ A + F E+ + +SV+WNA+I + + + + L G M + + D+ ++
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTF 206
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ L+ +HA V+ G + + + N++I Y C DA++VFD +
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
S ++ I+WN+MIAG ++ E+ LF +M
Sbjct: 267 SKDL------------------------------ISWNSMIAGFSKHELKESAFELFIQM 296
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
+ D +T++ L++AC+ ++G +HG VIK G N+++S Y ++ P
Sbjct: 297 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMY--IQFP 354
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
+ ME A F+ K+++SW S+I G+ + G
Sbjct: 355 TGTME---------------------------DALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
E A+ F + + I++D+ A+L +C+ LA L G+ +H+ + G FV +
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS 447
Query: 378 SLVNMYAKCGDLEGSALAFCGILEK-DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK 436
SL+ MY+KCG +E + F I K V+WN+M+ + HG ++ LF +M VK
Sbjct: 448 SLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVK 507
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQS 496
D VTFT +L CSH GLI EG M + + M+H A VD+LGR G V +A+
Sbjct: 508 LDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKE 567
Query: 497 LAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCAS 556
L + S + LG C A G++ + V +L +EPE YV LS++Y
Sbjct: 568 LIE--SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDL 625
Query: 557 GQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEM 616
+W+E V+K M ++GVKKVPG SWIEIRN V AF + + S+P DI ++ L EM
Sbjct: 626 KKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Query: 617 R 617
+
Sbjct: 686 Q 686
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 227/496 (45%), Gaps = 69/496 (13%)
Query: 17 SLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFS 76
S + G + +A LFDEMP RDSV+WN MI+ Y+ G + + LF M+ S S D +S
Sbjct: 44 SYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYS 103
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+S L A G +H LV+ GY ++ V +SL+DMY KC + DA + F E++
Sbjct: 104 FSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEIS 163
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
+ N V+ WN +IAG + +++ L
Sbjct: 164 EPNSVS-------------------------------WNALIAGFVQVRDIKTAFWLLGL 192
Query: 197 M-CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
M ++ D TF+ L+ + VH V+K G + + N+++S YA
Sbjct: 193 MEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
SDA +F+ G K+++SW SMI G+++
Sbjct: 253 SVSDAKRVFDGLGG------------------------------SKDLISWNSMIAGFSK 282
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
+ E A +F+ M R+ ++ D +L AC+ GK +H +I++GL++
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSA 342
Query: 376 GNSLVNMYAK--CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
N+L++MY + G +E + F + KDL+SWNS++ F G + +A+ F + +S
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 402
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
+K D+ F+ +L +CS L + G +++++ G ++ ++ M + G +
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 494 A----QSLAKKYSKTS 505
A Q ++ K+S +
Sbjct: 462 ARKCFQQISSKHSTVA 477
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 140/306 (45%), Gaps = 31/306 (10%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
+L +Y G A +F MP+R ++WNTMI+G+ G++E LF M S D
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
++FS L+ + G VHG VIK G+ + V +S++ YAK E DA E F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
N VSWNA+I +++ D + AF ++ M T + L
Sbjct: 161 EISEPNSVSWNALIAGFVQVRDIKTAFW---------LLGLMEMKAAVTMDAGTFAPLLT 211
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
LD D + + K VH+ +++ GL + + N++++ YA
Sbjct: 212 LLD--------DPMFCNLL-------------KQVHAKVLKLGLQHEITICNAMISSYAD 250
Query: 386 CGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
CG + + F G+ KDL+SWNSM+ F H A LF +M V+ D T+TG
Sbjct: 251 CGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTG 310
Query: 445 MLMTCS 450
+L CS
Sbjct: 311 LLSACS 316
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 155/347 (44%), Gaps = 66/347 (19%)
Query: 15 IVSLARSGRICHARKLFDEMP-DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
I S A G + A+++FD + +D ++WN+MI +S L + + LF M+ + D
Sbjct: 245 ISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETD 304
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP--HDARKV 131
++Y+ LSAC+G H FG +H +V+ G N+LI MY + DA +
Sbjct: 305 IYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSL 364
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F+ + + ++W N++I G A++G E +
Sbjct: 365 FESLKSKDLISW-------------------------------NSIITGFAQKGLSEDAV 393
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
F + S + D + FSAL+ +C++ + G +H KSG+ S V +S++ Y
Sbjct: 394 KFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMY 453
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN-IVSWTSMI 310
+K G + A FQQ K+ V+W +MI
Sbjct: 454 SK-------------------------------CGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG 357
+GY ++G G+++L +F M +++LD++ A+L AC+ ++ G
Sbjct: 483 LGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG 529
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 14/229 (6%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N I+D+++K G A + F + P ++ VSW +MI GYT G E A +F M R+
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+D +L AS+ G+ VH +I+ G + ++VG+SLV+MYAKC +E + A
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM-VASGVKPDEVTFTGML------MT 448
F I E + VSWN+++ F A L M + + V D TF +L M
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 449 CSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
C+ L + + + GL H + M+ G V++A+ +
Sbjct: 219 CNLLKQV-------HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDS-VAWNAMITAYSHLGLYQQSLSLFGSMRI 67
F +S IV ++ G I ARK F ++ + S VAWNAMI Y+ GL Q SL LF M
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 68 SNSKPDSFSYSAALSACAGGSHHGF 92
N K D +++A L+AC SH G
Sbjct: 504 QNVKLDHVTFTAILTAC---SHTGL 525
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/619 (28%), Positives = 299/619 (48%), Gaps = 67/619 (10%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
++ S L+ +S I + GR+ A ++FDE+ D V W++M++ + G Q++ F
Sbjct: 91 TLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFF 150
Query: 63 GSMRI-SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK 121
M + S+ PD + +SAC S+ G +H V+ G+ + L + NSL++
Sbjct: 151 RRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN---- 206
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGH 181
YA S F A+ +F+ + E+ I+W+T+IA +
Sbjct: 207 ---------------------------CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACY 239
Query: 182 ARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAM 241
+ G L +F +M + +P+ T ++ AC + D+ G H I+ G + +
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
+V +++ Y K P +A +F+ + P K
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFS-------------------------------RIPRK 328
Query: 302 NIVSWTSMIVGYTRNGNGELALSMF-LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
++VSW ++I G+T NG ++ F + + N+ + D ++ VL +C+ L L K
Sbjct: 329 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 388
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
HS +I+ G D F+G SLV +Y++CG L ++ F GI KD V W S++ +G+HG+
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG 448
Query: 421 NEAMCLFREMVASG-VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVA 479
+A+ F MV S VKP+EVTF +L CSH GLI EG F+ M +++ L+ ++H A
Sbjct: 449 TKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYA 508
Query: 480 CMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLE 539
+VD+LGR G + A + K+ + + LLGAC H + +V + L LE
Sbjct: 509 VLVDLLGRVGDLDTAIEITKRMPFSPTPQI--LGTLLGACRIHQNGEMAETVAKKLFELE 566
Query: 540 PEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSS 599
Y+++SN+Y G+W+ E +R + +G+KK S IEIR V FV+ +
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELH 626
Query: 600 PYMADISNILYFLEIEMRH 618
P + +L L++ M+
Sbjct: 627 PEKEPVYGLLKELDLHMKE 645
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 214/475 (45%), Gaps = 68/475 (14%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
AR++F EM R WN ++ + S +++ L F M KPD+F+ AL AC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 87 GSHHGFGSVIHALV---VVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
+G +IH V V G S L V +SLI MY KC + +A ++FDE+ + VTW
Sbjct: 73 LREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
S++ + + A+E FR M + S
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRM------------------------------VMASDVT 160
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
PD+ T L++ACT+ + G VHGFVI+ G+S+ + + NS+L+ YAK +A+ +
Sbjct: 161 PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNL 220
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
F + +SW+ +I Y +NG AL
Sbjct: 221 FKMIAEKDVISWSTVIAC-------------------------------YVQNGAAAEAL 249
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
+F DM + + + VL ACA+ L G+ H IR+GL+ + V +LV+MY
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM-VASGVKPDEVTF 442
KC E + F I KD+VSW +++ F L+G A+ ++ F M + + +PD +
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 443 TGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
+L +CS LG +++ F S ++G A +V++ R G + A +
Sbjct: 370 VKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKV 423
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
K + A F + +++ W +++ +R E L F M R+ + DN
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 344 VLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK 402
L AC L + +G+M+H + + L L+VG+SL+ MY KCG + + F + +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 403 DLVSWNSMLFAFGLHGRANEAMCLFREMV-ASGVKPDEVTFTGMLMTC-----SHLGLID 456
D+V+W+SM+ F +G +A+ FR MV AS V PD VT ++ C S LG
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 457 EGFAFFRSMSSEFGLSHGM 475
GF R S++ L + +
Sbjct: 186 HGFVIRRGFSNDLSLVNSL 204
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 281/578 (48%), Gaps = 65/578 (11%)
Query: 23 RICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALS 82
R AR++FDEM RDSV++N MI Y L + ++S+ +F + KPD + S+ L
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLR 315
Query: 83 ACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVT 142
AC I+ ++ +G+ V N LID+Y KC AR
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR------------- 362
Query: 143 WCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLY 202
+VF SM + ++WN++I+G+ + G++ + LFK M
Sbjct: 363 ------------------DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 203 QPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAME 262
Q D T+ L++ T D+ +G +H IKSG + V N+++ YAK D+++
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 263 MFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELA 322
+F+S G GDT V+W ++I R G+
Sbjct: 465 IFSSMGT----------------GDT---------------VTWNTVISACVRFGDFATG 493
Query: 323 LSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
L + M ++ + D L CASLA GK +H C++R G + L +GN+L+ M
Sbjct: 494 LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEM 553
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
Y+KCG LE S+ F + +D+V+W M++A+G++G +A+ F +M SG+ PD V F
Sbjct: 554 YSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVF 613
Query: 443 TGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS 502
++ CSH GL+DEG A F M + + + ++H AC+VD+L R +++A+ +
Sbjct: 614 IAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP 673
Query: 503 KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEA 562
A + +L AC GD+ T V + L P+ ++ SN Y A +W +
Sbjct: 674 IKPDASI--WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKV 731
Query: 563 EIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP 600
++RK + D+ + K PG SWIE+ V F SG++S+P
Sbjct: 732 SLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAP 769
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 241/522 (46%), Gaps = 67/522 (12%)
Query: 35 PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGS 94
P ++ WN++I A+S GL+ ++L +G +R S PD +++ + + ACAG G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 95 VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSS 154
+++ ++ G+ S L V N+L+DMY + AR+VFDE
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDE-------------------- 166
Query: 155 LFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMN 214
MP R ++WN++I+G++ G E L ++ E+ S PD +T S+++
Sbjct: 167 -----------MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLP 215
Query: 215 ACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVS 274
A + G +HGF +KSG +S + V N +++ Y K P+DA +F+ + VS
Sbjct: 216 AFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVS 275
Query: 275 WNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI 334
+N +MI GY + E ++ MFL+ +
Sbjct: 276 YN-------------------------------TMICGYLKLEMVEESVRMFLE-NLDQF 303
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
+ D L +VL AC L L+ K +++ +++ G V N L+++YAKCGD+ +
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F + KD VSWNS++ + G EAM LF+ M+ + D +T+ ++ + L
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEV 514
+ G S + G+ + ++DM + G V ++ K +S T ++
Sbjct: 424 LKFGKG-LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS---LKIFSSMGTGDTVTWNT 479
Query: 515 LLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCAS 556
++ AC GD TG V ++ E ++ +++ CAS
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCAS 521
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 62/339 (18%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G + AR +F+ M +D+V+WN++I+ Y G +++ LF M I + D +Y
Sbjct: 353 AKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYL 412
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+S + FG +H+ + SG L V+N+LIDMY KC + D+ K+F M
Sbjct: 413 MLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTG 472
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ VT WNT+I+ R G+ L + +M
Sbjct: 473 DTVT-------------------------------WNTVISACVRFGDFATGLQVTTQMR 501
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+S PD TF + C G +H +++ G+ S +++ N+++ Y+K C
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLE 561
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
++ +F + V+W +I A Y G
Sbjct: 562 NSSRVFERMSRRDVVTWTGMIYA-------------------------------YGMYGE 590
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG 357
GE AL F DM ++ I D++V A+++AC+ ++ G
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEG 629
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 97/182 (53%), Gaps = 1/182 (0%)
Query: 278 IIDAHMKLGDTQKAFLAFQQ-APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
+ID + + + F++ +P KN+ W S+I +++NG AL + + + +
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
D +V+ ACA L G +V+ I+ G + LFVGN+LV+MY++ G L + F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
+ +DLVSWNS++ + HG EA+ ++ E+ S + PD T + +L +L ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 457 EG 458
+G
Sbjct: 225 QG 226
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Query: 346 HACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE-KDL 404
A +S + L + +H+ +I GLD F L++ Y+ + S F + K++
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRS 464
WNS++ AF +G EA+ + ++ S V PD+ TF ++ C+ L + G +
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 465 MSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
+ + G + +VDM R G + A+ +
Sbjct: 132 I-LDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/672 (27%), Positives = 316/672 (47%), Gaps = 83/672 (12%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F T + A+ G I ARK+FD M +R+ W+AMI AYS +++ LF M
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
PD F + L CA G VIH++V+ G S L V+NS++ +Y KC +
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHAR 183
A K F M + + + W S+L AY + A+E+ + M + + WN +I G+ +
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 184 RGEVEACLGLFKEMCESL----------------------YQ--------------PDQW 207
G+ +A + L ++M E+ YQ P+
Sbjct: 295 LGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
T + ++AC+ + + G VH +K G+ + V NS++ Y+K DA ++F+S
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD----KNIVSWTSMIVGYTRNGNGELAL 323
+ +WN++I + + G KA+ F + D NI++W +MI GY +NG+ A+
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAM 473
Query: 324 SMFLDM------TRNSIQLDNLVAG------------------------------AVLHA 347
+F M RN+ + ++AG ++L A
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSW 407
CA+L + +H C++RR LD V N+L + YAK GD+E S F G+ KD+++W
Sbjct: 534 CANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITW 593
Query: 408 NSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
NS++ + LHG A+ LF +M G+ P+ T + +++ +G +DEG F S+++
Sbjct: 594 NSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIAN 653
Query: 468 EFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGT 527
++ + ++H + MV + GR + EA ++ + S T +E L C HGD+
Sbjct: 654 DYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS--ETPIWESFLTGCRIHGDIDM 711
Query: 528 GSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRN 587
E L +LEPE ++S +Y + + K D +KK G SWIE+RN
Sbjct: 712 AIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRN 771
Query: 588 VVTAFVSGNNSS 599
++ F +G+ S
Sbjct: 772 LIHTFTTGDQSK 783
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 300/635 (47%), Gaps = 105/635 (16%)
Query: 22 GRICHARKLFDEMPDRDSVA-WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA 80
G I +A ++FD+MP+RD VA WNAMIT G ++ S+ LF M + D F ++
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 81 LSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE 140
LS C GS FG +H+LV+ +G+ + V N+LI MY C DA VF+E
Sbjct: 197 LSMCDYGS-LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEET----- 250
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCES 200
+ R ++ +N +I G A E+ L +F++M E+
Sbjct: 251 ------------------------DVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEA 285
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
+P TF ++M +C+ + G VHG IK+G+ V N+ ++ Y+ E A
Sbjct: 286 SLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 342
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ------APDK------------- 301
++F S + V+WN +I ++ + + A +++ PD+
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 302 -----------------NIVSWTSMIVGYTRNGNGELALSMF-LDMTRNSIQLDNLVAG- 342
I ++I Y++NG E A +F + +N I + +++G
Sbjct: 403 DVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGF 462
Query: 343 -------------------------------AVLHACASLAILAHGKMVHSCIIRRGLDK 371
+L C S + L G H+ ++R G K
Sbjct: 463 YHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFK 522
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
+GN+L+NMY++CG ++ S F + EKD+VSWNS++ A+ HG A+ ++ M
Sbjct: 523 ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 582
Query: 432 ASG-VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
G V PD TF+ +L CSH GL++EG F SM G+ +DH +C+VD+LGR G+
Sbjct: 583 DEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGH 642
Query: 491 VAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLS 550
+ EA+SL K KT G+R + + L AC AHGDL G V + L E + YV LS
Sbjct: 643 LDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLS 702
Query: 551 NLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEI 585
N+Y +G WKEAE R+ + G K G SW+ +
Sbjct: 703 NIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 217/462 (46%), Gaps = 44/462 (9%)
Query: 43 NAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
N +T + G + +L LF + R + +PD +S S A++ FG +H +
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
SG V+N+L+ +Y + +K FDE+ + + +W +LL A A E
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFE 144
Query: 162 VFRSMPERVEIA-WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
VF MPER ++A WN MI G G E + LF+EM + + D++ F+ +++ C +
Sbjct: 145 VFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYG 203
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF--NSFGAFNQVSWNAI 278
+ +G VH VIK+G+ A V N++++ Y + DA +F +QV++N +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
ID + G+ R+ +L +F M S++ +
Sbjct: 264 IDG----------------------------LAGFKRDE----SLLVFRKMLEASLRPTD 291
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
L +V+ +C+ A+ G VH I+ G +KY V N+ + MY+ D + F
Sbjct: 292 LTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFES 348
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ EKDLV+WN+M+ ++ AM +++ M GVKPDE TF +L T L +++
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE-- 406
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
++ +FGLS ++ ++ + G + +A L ++
Sbjct: 407 --MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER 446
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 114/240 (47%), Gaps = 49/240 (20%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK--P 72
I + +++G+I A LF+ ++ ++WNA+I+ + H G + L F + S + P
Sbjct: 428 ISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILP 487
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
D+++ S LS C S GS HA V+ G + N+LI+MY +C ++ +VF
Sbjct: 488 DAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVF 547
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
++M++ + V+W N++I+ ++R GE E +
Sbjct: 548 NQMSEKDVVSW-------------------------------NSLISAYSRHGEGENAVN 576
Query: 193 LFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
+K M E PD TFSA+++AC+ H +++ G +E+ NS++ F+
Sbjct: 577 TYKTMQDEGKVIPDAATFSAVLSACS-----------HAGLVEEG----LEIFNSMVEFH 621
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 284/578 (49%), Gaps = 34/578 (5%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G + +A KLF ++P+ D V WN MI +S + + + L+ +M PDS ++ L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 82 SACA-GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE 140
+ G G +H VV G S+L V N+L+ MY C AR VFD
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD------- 194
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCES 200
R E V +WN MI+G+ R E E + L EM +
Sbjct: 195 -----------------------RRCKEDV-FSWNLMISGYNRMKEYEESIELLVEMERN 230
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
L P T +++AC++ +D VH +V + ++ ++N++++ YA A
Sbjct: 231 LVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIA 290
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
+ +F S A + +SW +I+ +++ G+ + A F Q P ++ +SWT MI GY R G
Sbjct: 291 VRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFN 350
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
+L +F +M + D +VL ACA L L G+ + + I + + + VGN+L+
Sbjct: 351 ESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALI 410
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+MY KCG E + F + ++D +W +M+ +G+ EA+ +F +M ++PD++
Sbjct: 411 DMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDI 470
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
T+ G+L C+H G++D+ FF M S+ + + H CMVDMLGR G V EA + +K
Sbjct: 471 TYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRK 530
Query: 501 YSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWK 560
+ + LLGA H D + + LEP+ Y +L N+Y +WK
Sbjct: 531 MPMNPNSIV--WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWK 588
Query: 561 EAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNS 598
+ VR++++D +KK PG S IE+ FV+G+ S
Sbjct: 589 DLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKS 626
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/658 (28%), Positives = 307/658 (46%), Gaps = 104/658 (15%)
Query: 19 ARSGRICHARKLFDEMPDR-DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSY 77
A++ + AR+LFD ++ D+V WN+++++YS G ++L LF M ++ P+S++
Sbjct: 228 AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSS-LPVANSLIDMYGKCLKPHDARKVFDEMA 136
+AL+AC G S+ G IHA V+ S SS L V N+LI MY +C K A ++ +M
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
+++ VT WN++I G+ + + L F +
Sbjct: 348 NADVVT-------------------------------WNSLIKGYVQNLMYKEALEFFSD 376
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY----- 251
M + ++ D+ + ++++ A ++L G +H +VIK GW S ++V N+++ Y
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 252 --------------------------AKLECPSDAMEMFNSF------------------ 267
A+ +C +A+E+F
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 268 --------------------GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
G + V N ++D + K + A F+ K++VSWT
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWT 556
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
SMI NGN A+ +F M + D++ +L A ASL+ L G+ +H ++R+
Sbjct: 557 SMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRK 616
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
G + ++V+MYA CGDL+ + F I K L+ + SM+ A+G+HG A+ LF
Sbjct: 617 GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 428 REMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGR 487
+M V PD ++F +L CSH GL+DEG F + M E+ L +H C+VDMLGR
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 488 GGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYV 547
V EA K A + LL AC +H + G + L LEP+ V
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEV--WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLV 794
Query: 548 MLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
++SN++ G+W + E VR +M G++K PG SWIE+ V F + + S P +I
Sbjct: 795 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 852
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 174/411 (42%), Gaps = 70/411 (17%)
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLP-VANSLIDMYGKCLKPH 126
+NS ++F+Y L C G +H+ + + L +A L+ MYGKC
Sbjct: 76 NNSPVEAFAY--VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLD 133
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
DA KVFDEM D W +++ AY ++ AL ++ WN + G
Sbjct: 134 DAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY----------WNMRVEG------ 177
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
LGL +F AL+ AC + RD+ G +H ++K G+ S + N+
Sbjct: 178 --VPLGLS-------------SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNA 222
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++S YAK + S A +F+ FQ+ D V W
Sbjct: 223 LVSMYAKNDDLSAARRLFD----------------------------GFQEKGDA--VLW 252
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
S++ Y+ +G L +F +M ++ + L AC + GK +H+ +++
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLK 312
Query: 367 RGL-DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
L+V N+L+ MY +CG + + + D+V+WNS++ + + EA+
Sbjct: 313 SSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALE 372
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
F +M+A+G K DEV+ T ++ L + G + + HG D
Sbjct: 373 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELH-----AYVIKHGWD 418
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 263 MFNSFGAFN-QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
+F +F +F ++ + K G A F + PD+ +W +MI Y NG
Sbjct: 106 IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPAS 165
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
AL+++ +M + L A+L ACA L + G +HS +++ G F+ N+LV+
Sbjct: 166 ALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 382 MYAKCGDLEGSALAFCGILEK-DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
MYAK DL + F G EK D V WNS+L ++ G++ E + LFREM +G P+
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSY 285
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
T L C G S+ S + ++ M R G + +A+ + ++
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQ 345
Query: 501 YSKTSGARTNS 511
+ NS
Sbjct: 346 MNNADVVTWNS 356
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 327 LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL-FVGNSLVNMYAK 385
LD++ N+ ++ VL C ++ G+ +HS I + L F+ LV MY K
Sbjct: 71 LDVSENNSPVEAF--AYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGK 128
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
CG L+ + F + ++ +WN+M+ A+ +G A+ L+ M GV +F +
Sbjct: 129 CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTS 505
L C+ L I G + S+ + G V +V M + ++ A+ L + +
Sbjct: 189 LKACAKLRDIRSG-SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG 247
Query: 506 GARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEV 544
A VL + L + S+ G+ L+TLE +E+
Sbjct: 248 DA------VLWNSI-----LSSYSTSGKSLETLELFREM 275
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/576 (30%), Positives = 268/576 (46%), Gaps = 70/576 (12%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
AR +FD M +RD ++WN++I + GL +++ LF + KPD ++ ++ L A +
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS 428
Query: 87 GSHH-GFGSVIHALVVVSGYRSSLPVANSLIDMY--GKCLKPHDARKVFDEMADSNEVTW 143
+H + S V+ +LID Y +C+K +
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE---------------- 472
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
+LF N L +AWN M+AG+ + + L LF M + +
Sbjct: 473 --ILFERHNFDL----------------VAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
D +T + + C + G VH + IKSG+ + V + IL
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL--------------- 559
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
D ++K GD A AF P + V+WT+MI G NG E A
Sbjct: 560 ----------------DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAF 603
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
+F M + D + A + L L G+ +H+ ++ FVG SLV+MY
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
AKCG ++ + F I ++ +WN+ML HG E + LF++M + G+KPD+VTF
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSK 503
G+L CSH GL+ E + RSM ++G+ ++H +C+ D LGR G V +A++L + S
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 504 TSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAE 563
+ A + Y LL AC GD TG V L LEP YV+LSN+Y A+ +W E +
Sbjct: 784 EASA--SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMK 841
Query: 564 IVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSS 599
+ R M VKK PG SWIE++N + FV + S+
Sbjct: 842 LARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN 877
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 166/399 (41%), Gaps = 64/399 (16%)
Query: 92 FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYA 151
G HA ++ + N+LI MY KC AR+VFD+M D + V+W S+L AYA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 152 NSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSA 211
SS + E ++ A+ LF+ + + + + T S
Sbjct: 117 QSS---------ECVVENIQQAF-----------------LLFRILRQDVVYTSRMTLSP 150
Query: 212 LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
++ C S + HG+ K G V ++++ Y K + +F +
Sbjct: 151 MLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRD 210
Query: 272 QVSWNAIIDAHMKLG------DTQKAFLAFQQAPDKNIVSWTSMIVG------------- 312
V WN ++ A++++G D AF + P++ + + I G
Sbjct: 211 VVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFAN 270
Query: 313 -------------------YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
Y +G L F DM + ++ D + +L +
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDS 330
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
LA G+ VH ++ GLD L V NSL+NMY K + F + E+DL+SWNS++
Sbjct: 331 LALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
+G EA+CLF +++ G+KPD+ T T +L S L
Sbjct: 391 IAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSL 429
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 206/504 (40%), Gaps = 96/504 (19%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSH-----LGLYQQSLSLFG 63
F + I ++ G + +AR++FD+MPDRD V+WN+++ AY+ + QQ+ LF
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 64 SMRISNSKPDSFSYSAALSAC-------AGGSHHGFGSVIHALVVVSGYRSSLPVANSLI 116
+R + S L C A S HG+ I G VA +L+
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI-------GLDGDEFVAGALV 187
Query: 117 DMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM------PERV 170
++Y K K + + +F+EM + V W +L AY A+++ + P +
Sbjct: 188 NIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEI 247
Query: 171 EIAWNTMIAG--------------------------------HARRGEVEACLGLFKEMC 198
+ I+G + G+ A L F +M
Sbjct: 248 TLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMV 307
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
ES + DQ TF ++ + + G VH +K G + V NS+++ Y KL
Sbjct: 308 ESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR--- 364
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
FG V F +++++SW S+I G +NG
Sbjct: 365 -------KFGFARTV---------------------FDNMSERDLISWNSVIAGIAQNGL 396
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI-LAHGKMVHSCIIRRGLDKYLFVGN 377
A+ +F+ + R ++ D +VL A +SL L+ K VH I+ FV
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 378 SLVNMYAKCGDLEGSALAFCGILEK---DLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
+L++ Y++ ++ + + F E+ DLV+WN+M+ + ++ + LF M G
Sbjct: 457 ALIDAYSRNRCMKEAEILF----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEG 458
+ D+ T + TC L I++G
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQG 536
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 134/341 (39%), Gaps = 63/341 (18%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F +T+ I + +R+ + A LF E + D VAWNAM+ Y+ ++L LF M
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ D F+ + C G +HA + SGY L V++ ++DMY KC A
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
+ FD S+P ++AW TMI+G GE E
Sbjct: 572 QFAFD-------------------------------SIPVPDDVAWTTMISGCIENGEEE 600
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
+F +M PD++T + L A + + G +H +K ++ V S++
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV 660
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
YAK DA +F N +WNA
Sbjct: 661 DMYAKCGSIDDAYCLFKRIEMMNITAWNA------------------------------- 689
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACA 349
M+VG ++G G+ L +F M I+ D + VL AC+
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACS 730
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
GK H+ I+ + F+ N+L++MY+KCG L + F + ++DLVSWNS+L A+
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 417 HGRA-----NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGL 471
+A LFR + V +T + ML C H G + + F + + GL
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKIGL 176
Query: 472 SHGMDHVA-CMVDMLGRGGYVAEAQSL 497
G + VA +V++ + G V E + L
Sbjct: 177 D-GDEFVAGALVNIYLKFGKVKEGKVL 202
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/610 (30%), Positives = 296/610 (48%), Gaps = 66/610 (10%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
+ TS + ++ G + A +F + D+ WNAM+ AY+ +L LFG MR
Sbjct: 308 YVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK 367
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ PDSF+ S +S C+ + +G +HA + +S+ + ++L+ +Y KC DA
Sbjct: 368 SVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA 427
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
VF +SM E+ +AW ++I+G + G+ +
Sbjct: 428 YLVF-------------------------------KSMEEKDMVAWGSLISGLCKNGKFK 456
Query: 189 ACLGLFKEMCES--LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
L +F +M + +PD +++ NAC + +G VHG +IK+G + V +S
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSS 516
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ Y+K P A+++ F +N+V+W
Sbjct: 517 LIDLYSKCGLPEMALKV-------------------------------FTSMSTENMVAW 545
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
SMI Y+RN EL++ +F M I D++ +VL A +S A L GK +H +R
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
G+ + N+L++MY KCG + + F + K L++WN M++ +G HG A+ L
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
F EM +G PD+VTF ++ C+H G ++EG F M ++G+ M+H A MVD+LG
Sbjct: 666 FDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLG 725
Query: 487 RGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGY 546
R G + EA S K + A ++ + LL A H ++ G E L +EPE+ Y
Sbjct: 726 RAGLLEEAYSFIK--AMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTY 783
Query: 547 VMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADIS 606
V L NLY +G EA + M ++G+ K PG SWIE+ + F SG +SSP A+I
Sbjct: 784 VQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIF 843
Query: 607 NILYFLEIEM 616
N+L L+ M
Sbjct: 844 NVLNRLKSNM 853
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 195/468 (41%), Gaps = 72/468 (15%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDE-------MPDRDSVAWNAMITAYSHLGLYQQSLSL 61
F TS + + G + +A ++FD + RD WN+MI Y +++ +
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 62 FGSMRISNSKPDSFSYSAALSA-CAGGS-HHGFGSVIHALVVVSGYRSSLPVANSLIDMY 119
F M + +PD+FS S +S C G+ G IH ++ + + + +LIDMY
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 120 GKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIA 179
K DA +VF E+ D + V + WN MI
Sbjct: 216 FKFGLSIDAWRVFVEIEDKSNV------------------------------VLWNVMIV 245
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSS 239
G G E+ L L+ + + +F+ + AC++S + +G +H V+K G +
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 240 AMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
V S+LS Y+ K G +A F
Sbjct: 306 DPYVCTSLLSMYS-------------------------------KCGMVGEAETVFSCVV 334
Query: 300 DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
DK + W +M+ Y N G AL +F M + S+ D+ V+ C+ L + +GK
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGR 419
VH+ + +R + + ++L+ +Y+KCG + L F + EKD+V+W S++ +G+
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 420 ANEAMCLFREMV--ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSM 465
EA+ +F +M +KPD T + C+ L + G SM
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 187/422 (44%), Gaps = 63/422 (14%)
Query: 43 NAMITAYSHLGLYQQSLSLFGSMRISNSKP---DSFSYSAALSACAGGSHHGFGSVIHAL 99
N+ I A G Y Q+L L+ + S P F++ + L AC+ ++ +G IH
Sbjct: 28 NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMA 159
VVV G+R +A SL++MY KC A +VFD + S
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS------------------- 126
Query: 160 LEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA-CTE 218
+ R WN+MI G+ + + +G F+ M +PD ++ S +++ C E
Sbjct: 127 -----GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 219 SR-DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
G +HGF++++ + +K A
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKT-------------------------------A 210
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
+ID + K G + A+ F + DK N+V W MIVG+ +G E +L +++ NS++L
Sbjct: 211 LIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKL 270
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
+ L AC+ G+ +H +++ GL +V SL++MY+KCG + + F
Sbjct: 271 VSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF 330
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
+++K L WN+M+ A+ + A+ LF M V PD T + ++ CS LGL +
Sbjct: 331 SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYN 390
Query: 457 EG 458
G
Sbjct: 391 YG 392
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F +S I ++ G A K+F M + VAWN+MI+ YS L + S+ LF M
Sbjct: 511 VFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS 570
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
PDS S ++ L A + + G +H + G S + N+LIDMY KC
Sbjct: 571 QGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A +F +M + +TW N MI G+ G+
Sbjct: 631 AENIFKKMQHKSLITW-------------------------------NLMIYGYGSHGDC 659
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTES 219
L LF EM ++ PD TF +L++AC S
Sbjct: 660 ITALSLFDEMKKAGESPDDVTFLSLISACNHS 691
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 148/359 (41%), Gaps = 39/359 (10%)
Query: 175 NTMIAGHARRGEVEACLGLF-KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
N+ I ++GE L L+ K S + +TF +L+ AC+ ++ YG +HG V+
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFL 293
GW + S+++ Y K A+++F+ W+ +Q
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG--------WS----------QSQSGVS 129
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
A +++ W SMI GY + + + F M ++ D V+
Sbjct: 130 A------RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGN 183
Query: 354 L--AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK-DLVSWNSM 410
GK +H ++R LD F+ +L++MY K G + F I +K ++V WN M
Sbjct: 184 FRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVM 243
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE-- 468
+ FG G ++ L+ + VK +FTG L CS E F R + +
Sbjct: 244 IVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ----SENSGFGRQIHCDVV 299
Query: 469 -FGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLG 526
GL + ++ M + G V EA+++ +S R + ++ A +A D G
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETV---FSCVVDKRLEIWNAMVAA-YAENDYG 354
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 174/581 (29%), Positives = 281/581 (48%), Gaps = 66/581 (11%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G + AR++FD + +RD+VAWN MI + L F +M +S P F+YS L
Sbjct: 248 GDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVL 307
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
+ C+ + G +IHA ++VS + LP+ N+L+DMY C +A VF + + N V
Sbjct: 308 NGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLV 367
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE-S 200
+W N++I+G + G E + +++ + S
Sbjct: 368 SW-------------------------------NSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
+PD++TFSA ++A E ++G ++HG V K G+ ++ V ++LS Y K A
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
++F+ + V W +I VG++R GN E
Sbjct: 457 QKVFDVMKERDVVLWTEMI-------------------------------VGHSRLGNSE 485
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
LA+ F++M R + D +V+ AC+ +A+L G++ H IR G D + V +LV
Sbjct: 486 LAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALV 545
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+MY K G E + F DL WNSML A+ HG +A+ F +++ +G PD V
Sbjct: 546 DMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAV 605
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
T+ +L CSH G +G F + E G+ G H +CMV+++ + G V EA L ++
Sbjct: 606 TYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQ 664
Query: 501 YSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWK 560
S + + LL AC +L G E + L+PE +++LSNLY +G+W+
Sbjct: 665 -SPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWE 723
Query: 561 EAEIVRKEMLDQGVKKVPGSSWIEIRNVVT-AFVSGNNSSP 600
+ +R+++ K PG SWIE+ N T F SG+ S+P
Sbjct: 724 DVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP 764
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 195/452 (43%), Gaps = 75/452 (16%)
Query: 7 YLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLG----LYQQSLSLF 62
Y + + I R + ARK+FD+MP R+ V + + ++ L+ Q + L
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKL- 79
Query: 63 GSMRISNSKPDSFSYSAALS---ACAGGSHHGFGSVIHALVVVSGYRSSL--PVANS-LI 116
GS ++ P + S+ + C + IHALV+ +G ++ P AN+ LI
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 117 DMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNT 176
MY +C ARKVFD+ MP R +++N
Sbjct: 140 SMYVRCGSLEQARKVFDK-------------------------------MPHRNVVSYNA 168
Query: 177 MIAGHARRGEVEA-CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
+ + ++R + + L M +P+ TF++L+ C D+L G ++ +IK
Sbjct: 169 LYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKL 228
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAF 295
G+S + V+ S+L Y+ GD + A F
Sbjct: 229 GYSDNVVVQTSVLGMYSSC-------------------------------GDLESARRIF 257
Query: 296 QQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILA 355
+++ V+W +MIVG +N E L F +M + + VL+ C+ L +
Sbjct: 258 DCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYS 317
Query: 356 HGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
GK++H+ II L + N+L++MY CGD+ + F I +LVSWNS++
Sbjct: 318 LGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 416 LHGRANEAMCLFREMVA-SGVKPDEVTFTGML 446
+G +AM ++R ++ S +PDE TF+ +
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 152/345 (44%), Gaps = 60/345 (17%)
Query: 113 NSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI 172
N+LI MY +C ARKVFD+M N VT LFG++ VF E V +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVT------------LFGLS-AVF----EYVSM 68
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSA---LMNACTESRDMLYGCMVH 229
G + ++ LG F+ + + P S+ L C + +H
Sbjct: 69 -------GSSLHSQIIK-LGSFQMI---FFMPLNEIASSVVELTRKCVSITVLKRARQIH 117
Query: 230 GFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQ 289
V+ +G +A E S YA N +I +++ G +
Sbjct: 118 ALVLTAGAGAATE------SPYAN----------------------NNLISMYVRCGSLE 149
Query: 290 KAFLAFQQAPDKNIVSWTSMIVGYTRNGN-GELALSMFLDMTRNSIQLDNLVAGAVLHAC 348
+A F + P +N+VS+ ++ Y+RN + A + M ++ ++ +++ C
Sbjct: 150 QARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC 209
Query: 349 ASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWN 408
A L + G ++S II+ G + V S++ MY+ CGDLE + F + +D V+WN
Sbjct: 210 AVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWN 269
Query: 409 SMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLG 453
+M+ + + + + FR M+ SGV P + T++ +L CS LG
Sbjct: 270 TMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/596 (29%), Positives = 288/596 (48%), Gaps = 38/596 (6%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDR-DSVAWNAMITAYSHLGLYQQSLS 60
H + S+LF + S+ S +A +F +P +S+ +N + S + ++
Sbjct: 42 HKLNSFLFNLSVSSSSINLS----YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATIL 97
Query: 61 LFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYG 120
+ +R + D FS+ L A + S G +H + V +DMY
Sbjct: 98 FYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYA 157
Query: 121 KCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAG 180
C + + AR VFDEM+ R + WNTMI
Sbjct: 158 SCGRINYARNVFDEMS-------------------------------HRDVVTWNTMIER 186
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
+ R G V+ LF+EM +S PD+ +++AC + +M Y ++ F+I++
Sbjct: 187 YCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMD 246
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD 300
+ ++++ YA C A E F N A++ + K G A + F Q
Sbjct: 247 THLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEK 306
Query: 301 KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
K++V WT+MI Y + + AL +F +M + I+ D + +V+ ACA+L IL K V
Sbjct: 307 KDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV 366
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
HSCI GL+ L + N+L+NMYAKCG L+ + F + +++VSW+SM+ A +HG A
Sbjct: 367 HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEA 426
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
++A+ LF M V+P+EVTF G+L CSH GL++EG F SM+ E+ ++ ++H C
Sbjct: 427 SDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGC 486
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
MVD+ GR + EA + + S + L+ AC HG+L G + + LEP
Sbjct: 487 MVDLFGRANLLREALEVIESMPVASNVVI--WGSLMSACRIHGELELGKFAAKRILELEP 544
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGN 596
+ + V++SN+Y +W++ +R+ M ++ V K G S I+ F+ G+
Sbjct: 545 DHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGD 600
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 241/447 (53%), Gaps = 40/447 (8%)
Query: 159 ALEVFRSMPERVEI-AWNTMIAGHARRGEVEACLGLFKEMCES-LYQPDQWTFSALMNAC 216
A +VF + + + + WNT+I G+A G + L++EM S L +PD T+ L+ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 217 TESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWN 276
T D+ G +H VI+SG+ S + V+NS+L YA C
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN--C-------------------- 169
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
GD A+ F + P+K++V+W S+I G+ NG E AL+++ +M I+
Sbjct: 170 ---------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKP 220
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
D ++L ACA + L GK VH +I+ GL + L N L+++YA+CG +E + F
Sbjct: 221 DGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS-GVKPDEVTFTGMLMTCSHLGLI 455
+++K+ VSW S++ ++G EA+ LF+ M ++ G+ P E+TF G+L CSH G++
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS--YE 513
EGF +FR M E+ + ++H CMVD+L R G V +A +Y K+ + N +
Sbjct: 341 KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY----EYIKSMPMQPNVVIWR 396
Query: 514 VLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQG 573
LLGAC HGD + LEP YV+LSN+Y + +W + + +RK+ML G
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 574 VKKVPGSSWIEIRNVVTAFVSGNNSSP 600
VKKVPG S +E+ N V F+ G+ S P
Sbjct: 457 VKKVPGHSLVEVGNRVHEFLMGDKSHP 483
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 185/419 (44%), Gaps = 77/419 (18%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSV-AWNAMITAYSHLGLYQQSLSLFGSMRISN-SKP 72
+VSL + +A K+F ++ +V WN +I Y+ +G + SL+ MR+S +P
Sbjct: 60 LVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEP 119
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
D+ +Y + A + G IH++V+ SG+ S + V NSL+ +Y
Sbjct: 120 DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLY------------- 166
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
AN A +VF MPE+ +AWN++I G A G+ E L
Sbjct: 167 ------------------ANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 193 LFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
L+ EM +PD +T +L++AC + + G VH ++IK G + + N +L YA
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVG 312
+ +A +F+ N V SWTS+IVG
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSV-------------------------------SWTSLIVG 297
Query: 313 YTRNGNGELALSMF--LDMTRNSIQLDNLVAGAVLHACASLAILAHG-----KMVHSCII 365
NG G+ A+ +F ++ T + + G +L+AC+ ++ G +M I
Sbjct: 298 LAVNGFGKEAIELFKYMESTEGLLPCEITFVG-ILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEA 423
++ + +V++ A+ G ++ + + ++ ++V W ++L A +HG ++ A
Sbjct: 357 EPRIEHF----GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 178/592 (30%), Positives = 273/592 (46%), Gaps = 66/592 (11%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
AR + P R+ V+W ++I+ + G + +L F MR P+ F++ A A A
Sbjct: 61 ARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVAS 120
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
G IHAL V G + V S DMY K DARK+FDE+
Sbjct: 121 LRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI----------- 169
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
PER WN I+ G + F E P+
Sbjct: 170 --------------------PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNS 209
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
TF A +NAC++ + G +HG V++SG+ + + V N ++ FY K + + +F
Sbjct: 210 ITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTE 269
Query: 267 FGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF 326
G N VSW S++ Y +N E A ++
Sbjct: 270 MGTKNAVSW-------------------------------CSLVAAYVQNHEDEKASVLY 298
Query: 327 LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC 386
L ++ ++ + + +VL ACA +A L G+ +H+ ++ +++ +FVG++LV+MY KC
Sbjct: 299 LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 387 GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV--KPDEVTFTG 444
G +E S AF + EK+LV+ NS++ + G+ + A+ LF EM G P+ +TF
Sbjct: 359 GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVS 418
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+L CS G ++ G F SM S +G+ G +H +C+VDMLGR G V A KK
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ 478
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
+ + L AC HG G E L L+P+ +V+LSN + A+G+W EA
Sbjct: 479 --PTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANT 536
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEM 616
VR+E+ G+KK G SWI ++N V AF + + S +I L L EM
Sbjct: 537 VREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEM 588
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 5/205 (2%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N +I+ + KL + A L + P +N+VSWTS+I G +NG+ AL F +M R +
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
++ A ASL + GK +H+ ++ G +FVG S +MY K + +
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS----- 450
F I E++L +WN+ + GR EA+ F E P+ +TF L CS
Sbjct: 166 FDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 451 HLGLIDEGFAFFRSMSSEFGLSHGM 475
+LG+ G ++ + +G+
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGL 250
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLD--KYLFVGNSLVNMYAKCGDLEGSALAFCGI 399
G +L S + + G++VH+ I++ LD F+ N L+NMY+K E + L
Sbjct: 10 GLLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 400 LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
+++VSW S++ +G + A+ F EM GV P++ TF + L L
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 250/473 (52%), Gaps = 35/473 (7%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR-RGEVEACLGLFKEMCESLYQP 204
L+ AY+ +A +VF M ER ++WNTMI + R R E EA L +F EM ++
Sbjct: 102 LINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEA-LDIFLEMRNEGFKF 160
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
++T S++++AC + D L +H +K+ + V ++L YAK DA+++
Sbjct: 161 SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV- 219
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALS 324
F+ DK+ V+W+SM+ GY +N N E AL
Sbjct: 220 ------------------------------FESMQDKSSVTWSSMVAGYVQNKNYEEALL 249
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
++ R S++ + +V+ AC++LA L GK +H+ I + G +FV +S V+MYA
Sbjct: 250 LYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
KCG L S + F + EK+L WN+++ F H R E M LF +M G+ P+EVTF+
Sbjct: 310 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 369
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+L C H GL++EG FF+ M + +GLS + H +CMVD+LGR G ++EA L K
Sbjct: 370 LLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFD 429
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
A + LL +C + +L E L LEPE +V+LSN+Y A+ QW+E
Sbjct: 430 PTASI--WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAK 487
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
RK + D VKKV G SWI+I++ V F G + P + +I + L L I+ R
Sbjct: 488 SRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFR 540
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 149/344 (43%), Gaps = 62/344 (18%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I + ++ G + AR++FD M +R V+WN MI Y+ + ++L +F MR K
Sbjct: 103 INAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSE 162
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
F+ S+ LSAC +H L V + +L V +L+D+Y KC DA +VF+
Sbjct: 163 FTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFES 222
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
M D + VTW S M+AG+ + E L L+
Sbjct: 223 MQDKSSVTWSS-------------------------------MVAGYVQNKNYEEALLLY 251
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
+ + +Q+T S+++ AC+ ++ G +H + KSG+ S + V +S + YA
Sbjct: 252 RRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA-- 309
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
K G +++++ F + +KN+ W ++I G+
Sbjct: 310 -----------------------------KCGSLRESYIIFSEVQEKNLELWNTIISGFA 340
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK 358
++ + + +F M ++ + + + ++L C ++ G+
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N +I+A+ K G + A F ++++VSW +MI YTRN AL +FL+M +
Sbjct: 100 NVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFK 159
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+VL AC K +H ++ +D L+VG +L+++YAKCG ++ +
Sbjct: 160 FSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQV 219
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
F + +K V+W+SM+ + + EA+ L+R ++ ++ T + ++ CS+L +
Sbjct: 220 FESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAAL 279
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
EG ++ + G + + VDM + G + E+
Sbjct: 280 IEGKQ-MHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 31/209 (14%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
L+ T+ + A+ G I A ++F+ M D+ SV W++M+ Y Y+++L L+ +
Sbjct: 197 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 256
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ + + F+ S+ + AC+ + G +HA++ SG+ S++ VA+S +DMY KC +
Sbjct: 257 MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRE 316
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
+ +F E+ + N LE+ WNT+I+G A+
Sbjct: 317 SYIIFSEVQEKN--------------------LEL-----------WNTIISGFAKHARP 345
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNAC 216
+ + LF++M + P++ TFS+L++ C
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%)
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
+L CA + K H IIR L+ + + N L+N Y+KCG +E + F G+LE+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTC 449
LVSWN+M+ + + +EA+ +F EM G K E T + +L C
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 179/585 (30%), Positives = 283/585 (48%), Gaps = 70/585 (11%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A K+F+EMP+RD V+WN+MI+ Y LG SL LF M KPD FS +AL AC+
Sbjct: 184 AEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Query: 87 GSHHGFGSVIHALVVVSGYRS-SLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G IH V S + + V S++DMY K EV++
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSK----------------YGEVSY-- 285
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL-YQP 204
A +F M +R +AWN MI +AR G V F++M E QP
Sbjct: 286 -------------AERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQP 332
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
D T L+ A +L G +HG+ ++ G+ M ++ +++ Y EC
Sbjct: 333 DVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYG--EC-------- 378
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALS 324
G + A + F + +KN++SW S+I Y +NG AL
Sbjct: 379 ---------------------GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALE 417
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
+F ++ +S+ D+ ++L A A L+ G+ +H+ I++ + NSLV+MYA
Sbjct: 418 LFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYA 477
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
CGDLE + F IL KD+VSWNS++ A+ +HG ++ LF EM+AS V P++ TF
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+L CS G++DEG+ +F SM E+G+ G++H CM+D++GR G + A+ ++
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
AR + LL A H D+ E + +E + YV+L N+Y +G+W++
Sbjct: 598 PTARI--WGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNR 655
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
++ M +G+ + S +E + F +G+ S I +L
Sbjct: 656 IKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 173/386 (44%), Gaps = 40/386 (10%)
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
R + N+ L +A+S L AL++F M + WN MI G G
Sbjct: 53 RDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
+ + M + + D +T+ ++ + + G +H VIK G+ S + V NS++
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
S Y KL C DA ++F + VSWN++I ++ LGD
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGD--------------------- 211
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
G +L +F +M + + D + L AC+ + GK +H +R
Sbjct: 212 ----------GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 369 LDK-YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
++ + V S+++MY+K G++ + F G++++++V+WN M+ + +GR +A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 428 REMV-ASGVKPDEVTFTGMLMTCSHL-GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDML 485
++M +G++PD +T +L + L G G+A R L H + A ++DM
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGF-----LPHMVLETA-LIDMY 375
Query: 486 GRGGYVAEAQSLAKKYSKTSGARTNS 511
G G + A+ + + ++ + NS
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNS 401
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 150/347 (43%), Gaps = 67/347 (19%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS- 70
TS + ++ G + +A ++F+ M R+ VAWN MI Y+ G + F M N
Sbjct: 271 TSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGL 330
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
+PD + L A A G IH + G+ + + +LIDMYG+C + A
Sbjct: 331 QPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEV 386
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
+FD MA+ N ++W S++ AY + G+ +
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQN-------------------------------GKNYSA 415
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
L LF+E+ +S PD T ++++ A ES + G +H +++KS + S + NS++
Sbjct: 416 LELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHM 475
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
YA DA + FN H+ L D +VSW S+I
Sbjct: 476 YAMCGDLEDARKCFN----------------HILLKD---------------VVSWNSII 504
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG 357
+ Y +G G +++ +F +M + + + ++L AC+ ++ G
Sbjct: 505 MAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 4/211 (1%)
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDT---QKAFLAFQQAPDK 301
N L F + + P+ + + + + QV+ A+ A D+ + A F +
Sbjct: 35 NRNLEFDSGISKPA-RLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKA 93
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH 361
+ W MI G+T G A+ + M ++ D V+ + A ++ L GK +H
Sbjct: 94 DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIH 153
Query: 362 SCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRAN 421
+ +I+ G ++V NSL+++Y K G + F + E+D+VSWNSM+ + G
Sbjct: 154 AMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGF 213
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
++ LF+EM+ G KPD + L CSH+
Sbjct: 214 SSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 267/564 (47%), Gaps = 62/564 (10%)
Query: 113 NSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI 172
NS++ Y L P DARK+FDEM D N ++W L+ Y + A +VF MPER +
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTF--------SALMNAC------TE 218
+W ++ G+ G+V+ LF +M E WT + +AC +
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEK--NKVSWTVMLIGFLQDGRIDDACKLYEMIPD 169
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEV-----KNSILSF------YAKLECPSDAMEMFNSF 267
++ M+HG + A E+ + S++++ Y + DA ++F+
Sbjct: 170 KDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM 229
Query: 268 GAFNQVSW-------------------------------NAIIDAHMKLGDTQKAFLAFQ 296
+VSW NA+I + G+ KA F
Sbjct: 230 PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 297 QAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAH 356
++N SW ++I + RNG AL +F+ M + ++ ++L CASLA L H
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
GK VH+ ++R D ++V + L+ MY KCG+L S L F KD++ WNS++ +
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 417 HGRANEAMCLFREMVASG-VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGM 475
HG EA+ +F EM SG KP+EVTF L CS+ G+++EG + SM S FG+
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPIT 469
Query: 476 DHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL 535
H ACMVDMLGR G EA + S T + LLGAC H L + L
Sbjct: 470 AHYACMVDMLGRAGRFNEAMEMID--SMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Query: 536 KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSG 595
+EPE Y++LSN+Y + G+W + +RK M + V+K PG SW E+ N V AF G
Sbjct: 528 IEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRG 587
Query: 596 N-NSSPYMADISNILYFLEIEMRH 618
NS P I IL L+ +R
Sbjct: 588 GINSHPEQESILKILDELDGLLRE 611
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 202/522 (38%), Gaps = 107/522 (20%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ + +G++ A LF +MP+++ V+W M+ + G + L+ +
Sbjct: 114 TALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI------ 167
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD + A S G G + RS + +++ YG+ + DARK+
Sbjct: 168 PDKDNI-ARTSMIHGLCKEGRVDEAREIFDEMSERSVI-TWTTMVTGYGQNNRVDDARKI 225
Query: 132 FDEMADSNEVTWCSLLFAYA-----------------------NSSLFGM--------AL 160
FD M + EV+W S+L Y N+ + G+ A
Sbjct: 226 FDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKAR 285
Query: 161 EVFRSMPERVEIAWNTMIAGHARRG-EVEACLGLFKEMCESLYQPDQWTFSALMNACTES 219
VF SM ER + +W T+I H R G E+EA L LF M + +P T ++++ C
Sbjct: 286 RVFDSMKERNDASWQTVIKIHERNGFELEA-LDLFILMQKQGVRPTFPTLISILSVCASL 344
Query: 220 RDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAII 279
+ +G VH +++ + + V + +++ Y K + +F+ F + + + WN+II
Sbjct: 345 ASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSII 404
Query: 280 DAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT-RNSIQLDN 338
GY +G GE AL +F +M S + +
Sbjct: 405 S-------------------------------GYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
+ A L AC+ ++ G ++ + + +F + YA D+ G A
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESM------ESVFGVKPITAHYACMVDMLGRA----- 482
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTC-SHLGLIDE 457
GR NEAM + M V+PD + +L C +H L
Sbjct: 483 -------------------GRFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVA 520
Query: 458 GFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAK 499
F + + E S ++ M GR VAE + L K
Sbjct: 521 EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMK 562
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT-RNSIQLDNLVAG 342
++G +A F K+I SW SM+ GY N A +F +M RN I + LV+G
Sbjct: 29 RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSG 88
Query: 343 AVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK 402
+ + + + V + R + + +LV Y G ++ + F + EK
Sbjct: 89 YMKN-----GEIDEARKVFDLMPERNVVSW----TALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 403 DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFF 462
+ VSW ML F GR ++A C EM+ D + T M+ G +DE F
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDA-CKLYEMIPDK---DNIARTSMIHGLCKEGRVDEAREIF 195
Query: 463 RSMS 466
MS
Sbjct: 196 DEMS 199
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 291/563 (51%), Gaps = 12/563 (2%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
RS R+ A KLFD MP+R V++ +I Y+ + +++ LF MR + + +
Sbjct: 119 RSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLAT 178
Query: 80 ALSACAGGSHHG---FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+SAC SH G ++ +L + + V+ +L+ MY CL DARK+FDEM
Sbjct: 179 VISAC---SHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
+ N VTW +L Y+ + L A E+F + E+ ++W TMI G R+ +++ L + E
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
M +P + L++A S G +HG ++K G+ ++ +I+ FYA
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
A++ F + + S NA+I +K G ++A F Q DK+I SW +MI GY ++
Sbjct: 356 IKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQS 415
Query: 317 GNGELALSMFLDMTRNS-IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
+ +LAL +F +M +S ++ D + +V A +SL L GK H + + +
Sbjct: 416 LSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNL 475
Query: 376 GNSLVNMYAKCGDLEGSALAF---CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
++++MYAKCG +E + F I + WN+++ HG A A+ L+ ++ +
Sbjct: 476 TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS 535
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVA 492
+KP+ +TF G+L C H GL++ G +F SM S+ G+ + H CMVD+LG+ G +
Sbjct: 536 LPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLE 595
Query: 493 EAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNL 552
EA+ + KK + + +LL A HG++ L ++P VMLSN+
Sbjct: 596 EAKEMIKKMPVKADVMI--WGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNV 653
Query: 553 YCASGQWKEAEIVRKEMLDQGVK 575
Y +G+W++ +VR+EM + V+
Sbjct: 654 YADAGRWEDVALVREEMRTRDVE 676
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 224/487 (45%), Gaps = 45/487 (9%)
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+AL +CA + G IH V+ SG S+ + NS+++MY KC DA VF + A
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ ++ ++ Y S AL++F MPER +++ T+I G+A+ + + LF+EM
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
++ T + +++AC+ + M+ IK + V ++L Y C
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
DA ++F+ N V+WN +++ + K G ++A F Q +K+IVSW +MI G R
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
+ AL + +M R ++ ++ +L A A + G +H I++RG D Y F+ +
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQAT 345
Query: 379 LVNMYA-------------------------------KCGDLEGSALAFCGILEKDLVSW 407
+++ YA K G +E + F +KD+ SW
Sbjct: 346 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSW 405
Query: 408 NSMLFAFGLHGRANEAMCLFREMVASG-VKPDEVTFTGMLMTCSHLGLIDEG-----FAF 461
N+M+ + A+ LFREM++S VKPD +T + S LG ++EG +
Sbjct: 406 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLN 465
Query: 462 FRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLL--GAC 519
F ++ L+ A ++DM + G + A ++ + S + + + ++ A
Sbjct: 466 FSTIPPNDNLT------AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSAT 519
Query: 520 HAHGDLG 526
H H L
Sbjct: 520 HGHAKLA 526
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 166/406 (40%), Gaps = 37/406 (9%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
+++G I A +LFD++ ++D V+W MI ++L + M KP
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
LSA A G +H +V G+ + ++I Y A + F+
Sbjct: 310 DLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD 369
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ + +L+ + + + A EVF ++ +WN MI+G+A+ + L LF+EM
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 199 -ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
S +PD T ++ +A + + G H ++ S P
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIP------------------P 471
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD---KNIVSWTSMIVGYT 314
+D + AIID + K G + A F Q + I W ++I G
Sbjct: 472 NDNLTA-------------AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSA 518
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM-VHSCIIRRGLDKYL 373
+G+ +LAL ++ D+ I+ +++ VL AC ++ GK S G++ +
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDI 578
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHG 418
+V++ K G LE + + ++ D++ W +L A HG
Sbjct: 579 KHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S++ ++ + I ++G + AR++FD+ D+D +WNAMI+ Y+ Q +L LF
Sbjct: 366 SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLF 425
Query: 63 GSMRISNS--KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYG 120
M IS+S KPD+ + + SA + G H + S + + ++IDMY
Sbjct: 426 REM-ISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 121 KCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAG 180
KC A +F + + + T WN +I G
Sbjct: 485 KCGSIETALNIFHQTKNISSSTIS----------------------------PWNAIICG 516
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNAC 216
A G + L L+ ++ +P+ TF +++AC
Sbjct: 517 SATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/597 (28%), Positives = 281/597 (47%), Gaps = 69/597 (11%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+A K+FD+M + + V W MIT +G ++++ F M +S + D F+ S+ SACA
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP---HDARKVFDEMADSNEVT 142
+ G +H+ + SG V SL+DMY KC D RKVFD M D + ++
Sbjct: 281 ELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMS 338
Query: 143 WCSLLFAY-ANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
W +L+ Y N +L A+ +F M + GH
Sbjct: 339 WTALITGYMKNCNLATEAINLFSEM----------ITQGHV------------------- 369
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
+P+ +TFS+ AC D G V G K G +S V NS++S + K + DA
Sbjct: 370 -EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
F S N VS+N +D G RN N E
Sbjct: 429 RAFESLSEKNLVSYNTFLD-------------------------------GTCRNLNFEQ 457
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A + ++T + + ++L A++ + G+ +HS +++ GL V N+L++
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS 517
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MY+KCG ++ ++ F + ++++SW SM+ F HG A + F +M+ GVKP+EVT
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
+ +L CSH+GL+ EG+ F SM + + M+H ACMVD+L R G + +A
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN-- 635
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKE 561
+ A + LGAC H + G + L+P + Y+ LSN+Y +G+W+E
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 562 AEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRH 618
+ +R++M ++ + K G SWIE+ + + F G+ + P I + L L E++
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR 752
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 216/499 (43%), Gaps = 81/499 (16%)
Query: 34 MPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP-DSFSYSAALSACAGGSHHGF 92
+ +R +VA + +I + + G + ++S M +P DS ++S+ L +C
Sbjct: 22 VSNRINVA-DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRL 80
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G ++HA ++ + NSLI +Y K A VF+ M
Sbjct: 81 GKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM----------------- 123
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
R +R ++W+ M+A + G + +F E E P+ + ++A+
Sbjct: 124 -----------RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 213 MNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
+ AC+ S + G + GF++K+G + S + V S++ + K E NSF
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE---------NSF---- 219
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR 331
+ A+ F + + N+V+WT MI + G A+ FLDM
Sbjct: 220 -----------------ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL 262
Query: 332 NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC---GD 388
+ + D +V ACA L L+ GK +HS IR GL V SLV+MYAKC G
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGS 320
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLH-GRANEAMCLFREMVASG-VKPDEVTFTGML 446
++ F + + ++SW +++ + + A EA+ LF EM+ G V+P+ TF+
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 447 MTCSHL-----GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
C +L G G AF R ++S +++ ++ M + + +AQ +
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANS------VISMFVKSDRMEDAQRAFESL 434
Query: 502 SKTSGARTNSYEVLLGACH 520
S+ + N++ L G C
Sbjct: 435 SEKNLVSYNTF--LDGTCR 451
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 164/405 (40%), Gaps = 76/405 (18%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAY-SHLGLYQQSLSLFGSMRIS-NSKPDSFSYSA 79
G + RK+FD M D ++W A+IT Y + L ++++LF M + +P+ F++S+
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
A AC S G + G S+ VANS+I M+ K + DA++ F+ +++ N
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
V+ +NT + G R E L E+ E
Sbjct: 439 LVS-------------------------------YNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
+TF++L++ + G +H V+K G S V N+++S Y+K
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
A +FN N +SW TSMI G+ ++G
Sbjct: 528 ASRVFNFMENRNVISW-------------------------------TSMITGFAKHGFA 556
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-----KMVHSCIIRRGLDKYLF 374
L F M ++ + + A+L AC+ + +++ G M I+ ++ Y
Sbjct: 557 IRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA- 615
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGIL--EKDLVSWNSMLFAFGLH 417
+V++ + G L A F + + D++ W + L A +H
Sbjct: 616 ---CMVDLLCRAG-LLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 190/437 (43%), Gaps = 40/437 (9%)
Query: 165 SMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQP-DQWTFSALMNACTESRDML 223
S+ R+ +A + +I H G++ + M +P D TFS+L+ +C +RD
Sbjct: 21 SVSNRINVA-DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFR 79
Query: 224 YGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHM 283
G +VH +I+ + NS++S Y+K + A ++F + F +
Sbjct: 80 LGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK----------- 128
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
+++VSW++M+ Y NG A+ +F++ + ++ A
Sbjct: 129 -----------------RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 344 VLHACASLAILAHGKMVHSCIIRRG-LDKYLFVGNSLVNMYAKCGD-LEGSALAFCGILE 401
V+ AC++ + G++ +++ G + + VG SL++M+ K + E + F + E
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
++V+W M+ G EA+ F +MV SG + D+ T + + C+ L E +
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL----ENLSL 287
Query: 462 FRSMSSEFGLSHGMDHVAC-MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACH 520
+ + S S +D V C +VDM + K + + S+ L+
Sbjct: 288 GKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYM 347
Query: 521 AHGDLGTGSSVGEYLKTL-EPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPG 579
+ +L T ++ + + + + E + S+ + A G + V K++L Q K+
Sbjct: 348 KNCNLAT-EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR-VGKQVLGQAFKRGLA 405
Query: 580 SSWIEIRNVVTAFVSGN 596
S+ +V++ FV +
Sbjct: 406 SNSSVANSVISMFVKSD 422
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
S I +S R+ A++ F+ + +++ V++N + ++Q+ L +
Sbjct: 412 NSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
+F++++ LS A G IH+ VV G + PV N+LI MY KC A +V
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F+ M + N ++W S+ I G A+ G L
Sbjct: 532 FNFMENRNVISWTSM-------------------------------ITGFAKHGFAIRVL 560
Query: 192 GLFKEMCESLYQPDQWTFSALMNACT 217
F +M E +P++ T+ A+++AC+
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILSACS 586
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 162/525 (30%), Positives = 267/525 (50%), Gaps = 51/525 (9%)
Query: 99 LVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGM 158
L++ G+RSSL A L+ H R + D +D + L+ Y++
Sbjct: 83 LILCCGHRSSLSDA----------LRVH--RHILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
A +VF +R WN + G E LGL+ +M + D++T++ ++ AC
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 219 SR----DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVS 274
S ++ G +H + + G+SS + + +++ YA+ FG + S
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR-------------FGCVDYAS 237
Query: 275 WNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI 334
+ F P +N+VSW++MI Y +NG AL F +M R +
Sbjct: 238 Y------------------VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 335 Q--LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGS 392
+++ +VL ACASLA L GK++H I+RRGLD L V ++LV MY +CG LE
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
F + ++D+VSWNS++ ++G+HG +A+ +F EM+A+G P VTF +L CSH
Sbjct: 340 QRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHE 399
Query: 453 GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSY 512
GL++EG F +M + G+ ++H ACMVD+LGR + EA + + G + +
Sbjct: 400 GLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKV--W 457
Query: 513 EVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQ 572
LLG+C HG++ L LEP+ YV+L+++Y + W E + V+K + +
Sbjct: 458 GSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHR 517
Query: 573 GVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
G++K+PG W+E+R + +FVS + +P M I L L +M+
Sbjct: 518 GLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMK 562
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 175/432 (40%), Gaps = 70/432 (16%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F T I + G + +ARK+FD+ R WNA+ A + G ++ L L+ M
Sbjct: 113 FLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI 172
Query: 69 NSKPDSFSYSAALSACAGG----SHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLK 124
+ D F+Y+ L AC +H G IHA + GY S + + +L+DMY +
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR--- 229
Query: 125 PHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARR 184
F + + + VF MP R ++W+ MIA +A+
Sbjct: 230 -----------------------FGCVDYASY-----VFGGMPVRNVVSWSAMIACYAKN 261
Query: 185 GEVEACLGLFKEMCESLYQ--PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
G+ L F+EM P+ T +++ AC + G ++HG++++ G S +
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP 321
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
V +++++ Y + +F+ + VSWN++I +
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS--------------------- 360
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
Y +G G+ A+ +F +M N + +VL AC+ ++ GK +
Sbjct: 361 ----------YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 363 CIIR-RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRA 420
+ R G+ + +V++ + L+ +A + E W S+L + +HG
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNV 470
Query: 421 NEAMCLFREMVA 432
A R + A
Sbjct: 471 ELAERASRRLFA 482
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 6/198 (3%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S+++ T+ + AR G + +A +F MP R+ V+W+AMI Y+ G ++L F M
Sbjct: 215 SHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM 274
Query: 66 --RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
+S P+S + + L ACA + G +IH ++ G S LPV ++L+ MYG+C
Sbjct: 275 MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCG 334
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM----PERVEIAWNTMIA 179
K ++VFD M D + V+W SL+ +Y A+++F M + + +++
Sbjct: 335 KLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLG 394
Query: 180 GHARRGEVEACLGLFKEM 197
+ G VE LF+ M
Sbjct: 395 ACSHEGLVEEGKRLFETM 412
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 194/640 (30%), Positives = 302/640 (47%), Gaps = 90/640 (14%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T + +L GR A +LFDEMP+R+ V+WN ++T G +++ +F +M
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM----PS 197
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
D S++A ++ GY + N ++ +A+ +
Sbjct: 198 RDVVSWNA---------------------MIKGY-----IENDGME---------EAKLL 222
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F +M++ N VTW S+++ Y A +F MPER ++W MI+G A L
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 192 GLFKEMCESL--YQPDQWTFSALMNAC----TESRDMLYGCMVHGFVIKSGWSSA----- 240
LF EM + + P+ T +L AC E R + G +H VI +GW +
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRL--GEQLHAQVISNGWETVDHDGR 340
Query: 241 ---------------------------MEVKNSILSFYAKLECPSDAMEMFNSFGAF-NQ 272
++ N I++ Y K A +F + ++
Sbjct: 341 LAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDK 400
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
VSW ++ID +++ GD +AF FQ+ DK+ V+WT MI G +N A S+ DM R
Sbjct: 401 VSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC 460
Query: 333 SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL---DKYLFVGNSLVNMYAKCGDL 389
++ N +L + + + L GK +H C+I + D L + NSLV+MYAKCG +
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIH-CVIAKTTACYDPDLILQNSLVSMYAKCGAI 519
Query: 390 EGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTC 449
E + F +++KD VSWNSM+ HG A++A+ LF+EM+ SG KP+ VTF G+L C
Sbjct: 520 EDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSAC 579
Query: 450 SHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGART 509
SH GLI G F++M + + G+DH M+D+LGR G + EA+ T
Sbjct: 580 SHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTV 639
Query: 510 NSYEVLLGACHAHGDLGTGSSVGE----YLKTLEPEKEVGYVMLSNLYCASGQWKEAEIV 565
Y LLG C + + E L L+P G+V L N+Y G+ + +
Sbjct: 640 --YGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEM 697
Query: 566 RKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
RKEM +GVKK PG SW+ + F+SG+ S+ A +
Sbjct: 698 RKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/523 (25%), Positives = 223/523 (42%), Gaps = 103/523 (19%)
Query: 22 GRICHARKLFDEMPDRDS----VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSY 77
G + HAR L D++P R S V W ++++ Y+ G ++ LF M N
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERN-------- 107
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ N+++ Y KC + ++A +F EM
Sbjct: 108 -------------------------------IVTCNAMLTGYVKCRRMNEAWTLFREMP- 135
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
N V+W +L A + A+E+F MPER ++WNT++ G R G++E +F M
Sbjct: 136 KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM 195
Query: 198 CESLYQPDQWTFSALMNACTESRDML-YGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
SRD++ + M+ G++ G ME
Sbjct: 196 --------------------PSRDVVSWNAMIKGYIENDG----ME-------------- 217
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
+A +F N V+W +++ + + GD ++A+ F + P++NIVSWT+MI G+ N
Sbjct: 218 --EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWN 275
Query: 317 GNGELALSMFLDMTR--NSIQLDNLVAGAVLHACASLAILAH--GKMVHSCIIRRG---L 369
AL +FL+M + +++ + ++ +AC L + G+ +H+ +I G +
Sbjct: 276 ELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETV 335
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFRE 429
D + SLV+MYA G L SA + DL S N ++ + +G A LF E
Sbjct: 336 DHDGRLAKSLVHMYASSG-LIASAQSLLN-ESFDLQSCNIIINRYLKNGDLERAETLF-E 392
Query: 430 MVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGG 489
V S D+V++T M+ G + F F+ + + G++ M+ L +
Sbjct: 393 RVKS--LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTW-----TVMISGLVQNE 445
Query: 490 YVAEAQSLAKKYSKTSGARTNS-YEVLLGACHAHGDLGTGSSV 531
AEA SL + NS Y VLL + A +L G +
Sbjct: 446 LFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI 488
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 168/378 (44%), Gaps = 48/378 (12%)
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
N++L+ Y K ++A +F N VSW ++ A G ++ A F + P++N+V
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPK-NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 305 SWTSMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
SW +++ G RNG+ E A +F M +R+ + + ++ G + + A L G M
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS--- 227
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
+K + S+V Y + GD+ + FC + E+++VSW +M+ F + EA
Sbjct: 228 ------EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 281
Query: 424 MCLFREMV--ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFG---LSHG---M 475
+ LF EM V P+ T + C LG+ FR + + +S+G +
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGV------EFRRLGEQLHAQVISNGWETV 335
Query: 476 DH----VACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSV 531
DH +V M G +A AQSL + S +++ +GDL ++
Sbjct: 336 DHDGRLAKSLVHMYASSGLIASAQSLLNE-----SFDLQSCNIIINRYLKNGDLERAETL 390
Query: 532 GEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTA 591
E +K+L +V + + + Y +G ++ R L Q + G +W T
Sbjct: 391 FERVKSL--HDKVSWTSMIDGYLEAG-----DVSRAFGLFQKLHDKDGVTW-------TV 436
Query: 592 FVSGNNSSPYMADISNIL 609
+SG + A+ +++L
Sbjct: 437 MISGLVQNELFAEAASLL 454
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
L S + A+ G I A ++F +M +D+V+WN+MI SH GL ++L+LF M
Sbjct: 503 LILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLD 562
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVAN------SLIDMYGK 121
S KP+S ++ LSAC SH G + L + + + + S+ID+ G+
Sbjct: 563 SGKKPNSVTFLGVLSAC---SHSGL--ITRGLELFKAMKETYSIQPGIDHYISMIDLLGR 617
Query: 122 CLKPHDARK 130
K +A +
Sbjct: 618 AGKLKEAEE 626
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/597 (29%), Positives = 293/597 (49%), Gaps = 71/597 (11%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I + G + AR LFD MP RD ++WNAMI+ Y G+ + L LF +MR + PD
Sbjct: 238 ITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDL 297
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+ ++ +SAC G IHA V+ +G+ + V NSL MY +A K+F
Sbjct: 298 MTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSR 357
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI-AWNTMIAGHARRGEVEACLGL 193
M ER +I +W TMI+G+ + +
Sbjct: 358 M--------------------------------ERKDIVSWTTMISGYEYNFLPDKAIDT 385
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
++ M + +PD+ T +A+++AC D+ G +H IK+ S + V N++++ Y+K
Sbjct: 386 YRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSK 445
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY 313
+C A+++F++ P KN++SWTS+I G
Sbjct: 446 CKCIDKALDIFHNI-------------------------------PRKNVISWTSIIAGL 474
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
N AL +FL + ++Q + + A L ACA + L GK +H+ ++R G+
Sbjct: 475 RLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDD 533
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
F+ N+L++MY +CG + + F +KD+ SWN +L + G+ + + LF MV S
Sbjct: 534 FLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKS 592
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
V+PDE+TF +L CS ++ +G +F M ++G++ + H AC+VD+LGR G + E
Sbjct: 593 RVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQE 651
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGY-VMLSNL 552
A +K T + LL AC H + G +++ L+ +K VGY ++L NL
Sbjct: 652 AHKFIQKMPVTPDPAV--WGALLNACRIHHKIDLGELSAQHIFELD-KKSVGYYILLCNL 708
Query: 553 YCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
Y G+W+E VR+ M + G+ G SW+E++ V AF+S + P +I+ +L
Sbjct: 709 YADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVL 765
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 185/414 (44%), Gaps = 63/414 (15%)
Query: 18 LARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR-ISNSKPDSFS 76
R G + A +F +M +R+ +WN ++ Y+ G + +++ L+ M + KPD ++
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+ L C G G +H VV GY + V N+LI MY KC AR +FD M
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
+ ++W N MI+G+ G L LF
Sbjct: 259 RRDIISW-------------------------------NAMISGYFENGMCHEGLELFFA 287
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
M PD T +++++AC D G +H +VI +G++ + V NS+ Y
Sbjct: 288 MRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMY----- 342
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
N SW ++A F + K+IVSWT+MI GY N
Sbjct: 343 -------------LNAGSW-------------REAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
+ A+ + M ++S++ D + AVL ACA+L L G +H I+ L Y+ V
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
N+L+NMY+KC ++ + F I K+++SW S++ L+ R EA+ R+M
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 32/306 (10%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC-ESLYQPDQWTFSALMNACT 217
A VF M ER +WN ++ G+A++G + + L+ M +PD +TF ++ C
Sbjct: 148 AWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCG 207
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
D+ G VH V++ G+ ++V N++++ Y
Sbjct: 208 GIPDLARGKEVHVHVVRYGYELDIDVVNALITMY-------------------------- 241
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD 337
+K GD + A L F + P ++I+SW +MI GY NG L +F M S+ D
Sbjct: 242 -----VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFC 397
+ +V+ AC L G+ +H+ +I G + V NSL MY G + F
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDE 457
+ KD+VSW +M+ + + ++A+ +R M VKPDE+T +L C+ LG +D
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 458 GFAFFR 463
G +
Sbjct: 417 GVELHK 422
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)
Query: 185 GEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVK 244
G++E + L M E D+ F AL+ C R G V+ + S S +E+
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
N+ L+ + ++ G+ A+ F + ++N+
Sbjct: 133 NAFLAMF-------------------------------VRFGNLVDAWYVFGKMSERNLF 161
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMT-RNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
SW ++ GY + G + A+ ++ M ++ D VL C + LA GK VH
Sbjct: 162 SWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVH 221
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
++R G + + V N+L+ MY KCGD++ + L F + +D++SWN+M+ + +G +E
Sbjct: 222 VVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEG 281
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLG 453
+ LF M V PD +T T ++ C LG
Sbjct: 282 LELFFAMRGLSVDPDLMTLTSVISACELLG 311
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
SY+ + I ++ I A +F +P ++ ++W ++I ++L M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
+++ +P++ + +AAL+ACA G IHA V+ +G + N+L+DMY +C +
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
+ A F+ + +VT +WN ++ G++ RG
Sbjct: 550 NTAWSQFN--SQKKDVT------------------------------SWNILLTGYSERG 577
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCM 227
+ + LF M +S +PD+ TF +L+ C++S+ + G M
Sbjct: 578 QGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLM 619
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/601 (28%), Positives = 285/601 (47%), Gaps = 94/601 (15%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
+ +T + + L+ R+C+ R L M DS+ SH GL+
Sbjct: 21 YSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQ--------SH-GLW------------- 58
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
DS +YS + C G++I + +G+R + + N LI+MY K +DA
Sbjct: 59 ---ADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDA 115
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
++FD+M P+R I+W TMI+ +++ +
Sbjct: 116 HQLFDQM-------------------------------PQRNVISWTTMISAYSKCKIHQ 144
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
L L M +P+ +T+S+++ +C D+ M+H +IK G S + V++
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRS--- 198
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
A+ID KLG+ + A F + + + W S
Sbjct: 199 ----------------------------ALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
+I G+ +N ++AL +F M R + +VL AC LA+L G H I++
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
D+ L + N+LV+MY KCG LE + F + E+D+++W++M+ +G + EA+ LF
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 429 EMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRG 488
M +SG KP+ +T G+L CSH GL+++G+ +FRSM +G+ +H CM+D+LG+
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 489 GYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVM 548
G + +A L + A T + LLGAC ++ + + L+PE Y +
Sbjct: 409 GKLDDAVKLLNEMECEPDAVT--WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 549 LSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNI 608
LSN+Y S +W E +R M D+G+KK PG SWIE+ + AF+ G+NS P + ++S
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKK 526
Query: 609 L 609
L
Sbjct: 527 L 527
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 138/363 (38%), Gaps = 68/363 (18%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+ S +F ++ I A+ G A +FDEM D++ WN++I ++ +L LF
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
M+ + + + ++ L AC G + G H +V Y L + N+L+DMY KC
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQDLILNNALVDMYCKCG 307
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM------PERVEIA---- 173
DA +VF++M + + +TW +++ A + AL++F M P + I
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 174 ------------------------------WNTMIAGHARRGEVEACLGLFKEM-CESLY 202
+ MI + G+++ + L EM CE
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE--- 424
Query: 203 QPDQWTFSALMNACTESRDML-------------------YGCMVHGFVIKSGWSSAMEV 243
PD T+ L+ AC R+M+ Y + + + W S E+
Sbjct: 425 -PDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEI 483
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAF--NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
+ + K E +E+ AF S I++ KL P+
Sbjct: 484 RTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPET 543
Query: 302 NIV 304
N V
Sbjct: 544 NFV 546
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 265/514 (51%), Gaps = 32/514 (6%)
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
I+A +++ G S + ++D K A ++F+++++ N + S++ AY ++SL
Sbjct: 29 INASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
+ + +++ + + +S PD++TF + +
Sbjct: 89 YCDVIRIYKQL------------------------------LRKSFELPDRFTFPFMFKS 118
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSW 275
C G VHG + K G + +N+++ Y K + DA ++F+ + +SW
Sbjct: 119 CASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISW 178
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N+++ + +LG +KA F DK IVSWT+MI GYT G A+ F +M I+
Sbjct: 179 NSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE 238
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
D + +VL +CA L L GK +H RRG K V N+L+ MY+KCG + +
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
F + KD++SW++M+ + HG A+ A+ F EM + VKP+ +TF G+L CSH+G+
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVL 515
EG +F M ++ + ++H C++D+L R G + A + K ++ + L
Sbjct: 359 QEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKI--WGSL 416
Query: 516 LGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
L +C G+L ++L LEPE YV+L+N+Y G+W++ +RK + ++ +K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 576 KVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
K PG S IE+ N+V FVSG+NS P+ +IS +L
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 197/447 (44%), Gaps = 44/447 (9%)
Query: 1 MHSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLS 60
+H + F T + + + +A +LF+++ + + +N++I AY+H LY +
Sbjct: 35 IHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIR 94
Query: 61 LFGSM-RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMY 119
++ + R S PD F++ +CA G +H + G R + N+LIDMY
Sbjct: 95 IYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMY 154
Query: 120 GKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIA 179
K DA KVFDEM + + ++W SLL YA A +F M ++ ++W MI+
Sbjct: 155 MKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMIS 214
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSS 239
G+ G + F+EM + +PD+ + +++ +C + + G +H + + G+
Sbjct: 215 GYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLK 274
Query: 240 AMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
V N+++ Y+K S A+++F + +SW
Sbjct: 275 QTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW------------------------ 310
Query: 300 DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-- 357
++MI GY +GN A+ F +M R ++ + + +L AC+ + + G
Sbjct: 311 -------STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 358 ---KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSA-LAFCGILEKDLVSWNSMLFA 413
M I ++ Y L+++ A+ G LE + + ++ D W S+L +
Sbjct: 364 YFDMMRQDYQIEPKIEHY----GCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSS 419
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEV 440
G + A+ +V ++P+++
Sbjct: 420 CRTPGNLDVALVAMDHLVE--LEPEDM 444
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 263/545 (48%), Gaps = 68/545 (12%)
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
Y A L+AC G +HA ++ + Y + + L+ YGKC DARKV DEM
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEM- 113
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
PE+ ++W MI+ +++ G L +F E
Sbjct: 114 ------------------------------PEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
M S +P+++TF+ ++ +C + + G +HG ++K + S + V +S+L YAK
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKA-- 201
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
G ++A F+ P++++VS T++I GY +
Sbjct: 202 -----------------------------GQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G E AL MF + + + + ++L A + LA+L HGK H ++RR L Y +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV-ASGV 435
NSL++MY+KCG+L + F + E+ +SWN+ML + HG E + LFR M V
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSM-SSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
KPD VT +L CSH + D G F M + E+G G +H C+VDMLGR G + EA
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 495 QSLAKKY-SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
K+ SK + S LLGAC H + G SVG L +EPE YV+LSNLY
Sbjct: 413 FEFIKRMPSKPTAGVLGS---LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLY 469
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLE 613
++G+W + VR M+ + V K PG SWI+ + F + + + P ++ + +
Sbjct: 470 ASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEIS 529
Query: 614 IEMRH 618
I+M+
Sbjct: 530 IKMKQ 534
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 158/334 (47%), Gaps = 69/334 (20%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
ARK+ DEMP+++ V+W AMI+ YS G ++L++F M S+ KP+ F+++ L++C
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
S G G IH L+V Y S + V +SL+DMY K + +AR++F+ + + + V+ ++
Sbjct: 166 ASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAI 225
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
+ YA L ALE+F + H+ G+ P+
Sbjct: 226 IAGYAQLGLDEEALEMFHRL--------------HSE--------GM---------SPNY 254
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
T+++L+ A + + +G H V++ L FYA L+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRE-----------LPFYAVLQ----------- 292
Query: 267 FGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF 326
N++ID + K G+ A F P++ +SW +M+VGY+++G G L +F
Sbjct: 293 ---------NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343
Query: 327 LDMT-RNSIQLDNLVAGAVLHACASLAILAHGKM 359
M ++ D + AVL C +HG+M
Sbjct: 344 RLMRDEKRVKPDAVTLLAVLSGC------SHGRM 371
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 101/180 (56%), Gaps = 10/180 (5%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S++F +S + A++G+I AR++F+ +P+RD V+ A+I Y+ LGL +++L +F +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLP----VANSLIDMYGK 121
P+ +Y++ L+A +G + G H V+ R LP + NSLIDMY K
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL----RRELPFYAVLQNSLIDMYSK 301
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM--PERVEIAWNTMIA 179
C AR++FD M + ++W ++L Y+ L LE+FR M +RV+ T++A
Sbjct: 302 CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
+F +P ++ I NG + AL L+M ++ A+L+AC
Sbjct: 11 SFSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRA 67
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
L G+ VH+ +I+ ++ L+ Y KC LE + + EK++VSW +M+
Sbjct: 68 LRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISR 127
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTC---SHLGLIDEGFAFFRSMSSEFG 470
+ G ++EA+ +F EM+ S KP+E TF +L +C S LGL + + +
Sbjct: 128 YSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSH 187
Query: 471 LSHGMDHVACMVDMLGRGGYVAEAQSL 497
+ G + ++DM + G + EA+ +
Sbjct: 188 IFVG----SSLLDMYAKAGQIKEAREI 210
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query: 7 YLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR 66
Y S I ++ G + +AR+LFD MP+R +++WNAM+ YS GL ++ L LF MR
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 67 ISNS-KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVAN--SLIDMYGKCL 123
KPD+ + A LS C+ G G I +V Y + + ++DM G+
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAG 407
Query: 124 KPHDARKVFDEM 135
+ +A + M
Sbjct: 408 RIDEAFEFIKRM 419
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/611 (27%), Positives = 293/611 (47%), Gaps = 36/611 (5%)
Query: 17 SLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR---ISNSKPD 73
+L+ S + ++ K+ + + + +WN I +S ++S L+ M S+PD
Sbjct: 96 ALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPD 155
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
F+Y CA G +I V+ V N+ I M+ C +ARKVFD
Sbjct: 156 HFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFD 215
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL 193
E P R ++WN +I G+ + GE E + +
Sbjct: 216 ES-------------------------------PVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
+K M +PD T L+++C+ D+ G + +V ++G + + N+++ ++K
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSK 304
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY 313
+A +F++ VSW +I + + G + F +K++V W +MI G
Sbjct: 305 CGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGS 364
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
+ G+ AL++F +M ++ + D + L AC+ L L G +H I + L +
Sbjct: 365 VQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNV 424
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
+G SLV+MYAKCG++ + F GI ++ +++ +++ LHG A+ A+ F EM+ +
Sbjct: 425 ALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDA 484
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
G+ PDE+TF G+L C H G+I G +F M S F L+ + H + MVD+LGR G + E
Sbjct: 485 GIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEE 544
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
A L + + A + LL C HG++ G + L L+P YV+L +Y
Sbjct: 545 ADRLMESMPMEADAAV--WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMY 602
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLE 613
+ W++A+ R+ M ++GV+K+PG S IE+ +V F+ + S P I + L+ L
Sbjct: 603 GEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLG 662
Query: 614 IEMRHTRPINF 624
MR + + F
Sbjct: 663 RHMRSSLSVLF 673
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 206/497 (41%), Gaps = 88/497 (17%)
Query: 108 SLPVANSLIDMYGKC-----LKPHDARKV-----FDEMADSNEVTWCSLLFAYANSSLFG 157
S + N L+ + KC LK A+ + D A S + +C+L + S
Sbjct: 49 SFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCAL----SESRYLD 104
Query: 158 MALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM-----CESLYQPDQWTFSAL 212
++++ + + +WN I G + + L+K+M CES +PD +T+ L
Sbjct: 105 YSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCES--RPDHFTYPVL 162
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
C + R G M+ G V+K V N+ + +A +A ++F+ +
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
VSWN +I+ + K+G+ +KA ++ M
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKL-------------------------------MESE 251
Query: 333 SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEG- 391
++ D++ ++ +C+ L L GK + + GL + + N+L++M++KCGD+
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 392 -------------------SALAFCGIL-----------EKDLVSWNSMLFAFGLHGRAN 421
S A CG+L EKD+V WN+M+ R
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACM 481
+A+ LF+EM S KPDE+T L CS LG +D G R + ++ LS + +
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI-EKYSLSLNVALGTSL 430
Query: 482 VDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTG-SSVGEYLKTLEP 540
VDM + G ++EA S+ + + +Y ++G HGD T S E +
Sbjct: 431 VDMYAKCGNISEALSV---FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIA 487
Query: 541 EKEVGYVMLSNLYCASG 557
E+ ++ L + C G
Sbjct: 488 PDEITFIGLLSACCHGG 504
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ I AR G + +RKLFD+M ++D V WNAMI Q +L+LF M+ SN+K
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA--NSLIDMYGKCLKPHDAR 129
PD + LSAC+ G IH + Y SL VA SL+DMY KC +A
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHR--YIEKYSLSLNVALGTSLVDMYAKCGNISEA- 443
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
L VF + R + + +I G A G+
Sbjct: 444 ------------------------------LSVFHGIQTRNSLTYTAIIGGLALHGDAST 473
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG 236
+ F EM ++ PD+ TF L++AC HG +I++G
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSAC-----------CHGGMIQTG 509
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 190/619 (30%), Positives = 291/619 (47%), Gaps = 77/619 (12%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF----G 63
LF +S I A G I +R++FD +R+ WN MI Y +S+ LF G
Sbjct: 251 LFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIG 310
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
S I + D +Y A SA + G H V + + + NSL+ MY +C
Sbjct: 311 SKEIVS---DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCG 367
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
H + FG VF SM ER ++WNTMI+ +
Sbjct: 368 SVHKS---------------------------FG----VFLSMRERDVVSWNTMISAFVQ 396
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G + L L EM + ++ D T +AL++A + R+ G H F+I+ G
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ----- 451
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG---DTQKAFLAFQQAPD 300
E NS+ +ID + K G +QK F A +
Sbjct: 452 -----------------FEGMNSY----------LIDMYSKSGLIRISQKLFEGSGYA-E 483
Query: 301 KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
++ +W SMI GYT+NG+ E +F M +I+ + + ++L AC+ + + GK +
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
H IR+ LD+ +FV ++LV+MY+K G ++ + F E++ V++ +M+ +G HG
Sbjct: 544 HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMG 603
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
A+ LF M SG+KPD +TF +L CS+ GLIDEG F M + + +H C
Sbjct: 604 ERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCC 663
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
+ DMLGR G V EA K + G + LLG+C HG+L +V E L +
Sbjct: 664 ITDMLGRVGRVNEAYEFVKGLGE-EGNIAELWGSLLGSCKLHGELELAETVSERLAKFDK 722
Query: 541 EKEV-GY-VMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNS 598
K GY V+LSN+Y +WK + VR+ M ++G+KK G S IEI V FVS +
Sbjct: 723 GKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQE 782
Query: 599 SPYMADISNILYFLEIEMR 617
P+ ++I +++ L +MR
Sbjct: 783 HPHSSEIYDVIDGLAKDMR 801
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 255/570 (44%), Gaps = 71/570 (12%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN--S 70
S++ + + G AR+LFD +P +V WN +I + L ++L + M+ + +
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD--- 127
D+++YS+ L ACA + G +H ++ SS V NSL++MY CL D
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 128 ---ARKVFDEMADSNEVTWCSLLFAYANS-------SLFG--MALEVFRSMPERVEIAWN 175
RKVFD M N V W +L+ Y + FG M +EV S V +
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 176 TMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
I+ ++ V GL ++ + Y D + S+ ++ E D+ V ++
Sbjct: 224 VSISRSIKKANV--FYGLMLKLGDE-YVKDLFVVSSAISMYAELGDIESSRRVFDSCVER 280
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMF--------------------NSFGAFNQVSW 275
+EV N+++ Y + +C +++E+F ++ A QV
Sbjct: 281 N----IEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVEL 336
Query: 276 --------------------NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
N+++ + + G K+F F ++++VSW +MI + +
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQ 396
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
NG + L + +M + ++D + A+L A ++L GK H+ +IR+G+ ++ +
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI-QFEGM 455
Query: 376 GNSLVNMYAKCGDLEGSALAF--CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
+ L++MY+K G + S F G E+D +WNSM+ + +G + +FR+M+
Sbjct: 456 NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQ 515
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
++P+ VT +L CS +G +D G S L + + +VDM + G +
Sbjct: 516 NIRPNAVTVASILPACSQIGSVDLGKQ-LHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
A+ + +S+T + +Y ++ HG
Sbjct: 575 AEDM---FSQTKERNSVTYTTMILGYGQHG 601
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDE--MPDRDSVAWNAMITAYSHLGLYQQSLSL 61
M SYL SK SG I ++KLF+ +RD WN+MI+ Y+ G +++ +
Sbjct: 455 MNSYLIDMYSK------SGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK 121
F M N +P++ + ++ L AC+ G +H + ++ VA++L+DMY K
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTM 177
A +F + + N VT+ +++ Y + A+ +F SM E I + +
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628
Query: 178 IAGHARRGEVEACLGLFKEMCE 199
++ + G ++ L +F+EM E
Sbjct: 629 LSACSYSGLIDEGLKIFEEMRE 650
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 269 bits (687), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/573 (28%), Positives = 285/573 (49%), Gaps = 36/573 (6%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N M+ + + + + L+LFG +R PD+F+ L + G +H V
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
+G V+NSL+ MY K KVFDEM
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEM-------------------------- 107
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC-ESLYQPDQWTFSALMNACTESR 220
P+R ++WN +I+ + G E +G+FK M ES + D+ T + ++AC+ +
Sbjct: 108 -----PQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
++ G ++ FV+ + + ++ + N+++ + K C A +F+S N W +++
Sbjct: 163 NLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 281 AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
++ G +A + F+++P K++V WT+M+ GY + + AL +F M I+ DN V
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 341 AGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL 400
++L CA L GK +H I + VG +LV+MYAKCG +E + F I
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 401 EKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFA 460
E+D SW S+++ ++G + A+ L+ EM GV+ D +TF +L C+H G + EG
Sbjct: 342 ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 461 FFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGAR-TNSYEVLLGAC 519
F SM+ + +H +C++D+L R G + EA+ L K S Y LL A
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAA 461
Query: 520 HAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPG 579
+G++ V E L+ +E + +L+++Y ++ +W++ VR++M D G++K PG
Sbjct: 462 RNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPG 521
Query: 580 SSWIEIRNVVTAFVSGNN--SSPYMADISNILY 610
S IEI V F+ G++ S P M +I+++L+
Sbjct: 522 CSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLH 554
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 176/374 (47%), Gaps = 34/374 (9%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSY 77
A G+I K+FDEMP RD V+WN +I++Y G ++ ++ +F M + SN K D +
Sbjct: 92 ASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTI 151
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ LSAC+ + G I+ VV + S+ + N+L+DM+ KC AR VFD M D
Sbjct: 152 VSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRD 210
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
N W S++F Y ++ A +F P + + W M+ G+ + + L LF+ M
Sbjct: 211 KNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCM 270
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
+ +PD + +L+ C ++ + G +HG++ ++ + V +++ YAK C
Sbjct: 271 QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCI 330
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
A+E+ F + +++ SWTS+I G NG
Sbjct: 331 ETALEV-------------------------------FYEIKERDTASWTSLIYGLAMNG 359
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-KMVHSCIIRRGLDKYLFVG 376
AL ++ +M ++LD + AVL AC +A G K+ HS R +
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 377 NSLVNMYAKCGDLE 390
+ L+++ + G L+
Sbjct: 420 SCLIDLLCRAGLLD 433
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 37/297 (12%)
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGF 231
+ +N M+ A L LF E+ PD +T ++ + R ++ G VHG+
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 232 VIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKA 291
+K+G V NS++ YA L ++F+ + VSWN +I +
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISS---------- 121
Query: 292 FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS-IQLDNLVAGAVLHACAS 350
Y NG E A+ +F M++ S ++ D + L AC++
Sbjct: 122 ---------------------YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSM 410
L L G+ ++ ++ + + +GN+LV+M+ KCG L+ + F + +K++ W SM
Sbjct: 161 LKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSM 219
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
+F + GR +EA LF S VK D V +T M+ DE FR M +
Sbjct: 220 VFGYVSTGRIDEARVLFER---SPVK-DVVLWTAMMNGYVQFNRFDEALELFRCMQT 272
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS + +GRI AR LF+ P +D V W AM+ Y + ++L LF M+ + +
Sbjct: 217 TSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIR 276
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD+F + L+ CA G IH + + V +L+DMY KC A +V
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM 166
F E+ + + +W SL++ A + + G AL+++ M
Sbjct: 337 FYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEM 371
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G I A ++F E+ +RD+ +W ++I + G+ ++L L+ M + D+ ++
Sbjct: 325 AKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFV 384
Query: 79 AALSACAGGSHHGFG-SVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
A L+AC G G + H++ + + LID+ + +A ++ D+M
Sbjct: 385 AVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRG 444
Query: 138 SNEVT----WCSLLFAYANSSLFGMALEVFRSMPERVEIA 173
++ T +CSLL A N +A V + E+VE++
Sbjct: 445 ESDETLVPVYCSLLSAARNYGNVKIAERVAEKL-EKVEVS 483
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 180/580 (31%), Positives = 270/580 (46%), Gaps = 65/580 (11%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR- 66
++ T+ + A+ G + A K+FDEMP RD VAWNAMI+ +S + LF MR
Sbjct: 138 MYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRR 197
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
I P+ + A G +H G+ + L V ++D+Y K
Sbjct: 198 IDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCII 257
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
AR+VFD NEVTW +++ Y + + A EVF M +A T +A
Sbjct: 258 YARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA------- 310
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
+GL ++ C D+ G VH + +K+G+ + V+N+
Sbjct: 311 ----IGL------------------ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNT 348
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
I+SFYAK G AF F + K+++S+
Sbjct: 349 IISFYAKY-------------------------------GSLCDAFRQFSEIGLKDVISY 377
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
S+I G N E + +F +M + I+ D VL AC+ LA L HG H +
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVV 437
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
G + N+L++MY KCG L+ + F + ++D+VSWN+MLF FG+HG EA+ L
Sbjct: 438 HGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS-SEFGLSHGMDHVACMVDML 485
F M +GV PDEVT +L CSH GL+DEG F SMS +F + +DH CM D+L
Sbjct: 498 FNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLL 557
Query: 486 GRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG 545
R GY+ EA K R LL AC + + G+ V + +++L E
Sbjct: 558 ARAGYLDEAYDFVNKMPFEPDIRV--LGTLLSACWTYKNAELGNEVSKKMQSLGETTE-S 614
Query: 546 YVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEI 585
V+LSN Y A+ +W++A +R +G+ K PG SW+++
Sbjct: 615 LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 211/463 (45%), Gaps = 71/463 (15%)
Query: 5 RSYLFQTTSKIVSLARSGRICH----ARKLFDEMPDR--DSVAWNAMITAYSHLGLYQQS 58
RS +++ +V+L R C+ AR +FDE+P + +AW+ MI AY+ +++
Sbjct: 28 RSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKA 87
Query: 59 LSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDM 118
L L+ M S +P ++Y L ACAG G +IH+ V S + + + V +L+D
Sbjct: 88 LDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDF 147
Query: 119 YGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMI 178
Y KC + A KVFDE MP+R +AWN MI
Sbjct: 148 YAKCGELEMAIKVFDE-------------------------------MPKRDMVAWNAMI 176
Query: 179 AGHARRGEVEACLGLFKEMCE-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW 237
+G + + +GLF +M P+ T + A + + G VHG+ + G+
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
S+ + VK IL YAK +C A +F+ L F++
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVFD---------------------------LDFKK 269
Query: 298 APDKNIVSWTSMIVGYTRNGNGELALSMFLDM--TRNSIQLDNLVAGAVLHACASLAILA 355
N V+W++MI GY N + A +F M N + + G +L CA L+
Sbjct: 270 ----NEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLS 325
Query: 356 HGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
G+ VH ++ G L V N++++ YAK G L + F I KD++S+NS++
Sbjct: 326 GGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCV 385
Query: 416 LHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
++ R E+ LF EM SG++PD T G+L CSHL + G
Sbjct: 386 VNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHG 428
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 29/253 (11%)
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
F +L+ C SR+++ G ++H ++K + + +++L +L + +E+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLS---SSTVLVNLTRLYASCNEVELARH-- 56
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
F+++ P N ++W MI Y N E AL ++
Sbjct: 57 VFDEIP-----------------------HPRINPIAWDLMIRAYASNDFAEKALDLYYK 93
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
M + ++ VL ACA L + GK++HS + ++V +LV+ YAKCG+
Sbjct: 94 MLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGE 153
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM-VASGVKPDEVTFTGMLM 447
LE + F + ++D+V+WN+M+ F LH + + LF +M G+ P+ T GM
Sbjct: 154 LEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFP 213
Query: 448 TCSHLGLIDEGFA 460
G + EG A
Sbjct: 214 ALGRAGALREGKA 226
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 22/139 (15%)
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN--- 381
MFL + I+ NLV G V +H +++R L L LVN
Sbjct: 1 MFLSLLETCIRSRNLVLGQV---------------IHQHLLKRSLT--LSSSTVLVNLTR 43
Query: 382 MYAKCGDLEGSALAFCGILEKDL--VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDE 439
+YA C ++E + F I + ++W+ M+ A+ + A +A+ L+ +M+ SGV+P +
Sbjct: 44 LYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTK 103
Query: 440 VTFTGMLMTCSHLGLIDEG 458
T+ +L C+ L ID+G
Sbjct: 104 YTYPFVLKACAGLRAIDDG 122
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 285/598 (47%), Gaps = 78/598 (13%)
Query: 16 VSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSF 75
+SL R + A ++F+++ + + N++I A++ Q+ +F M+ D+F
Sbjct: 61 LSLCRQTNL--AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNF 118
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC--LKPHDARKVFD 133
+Y L AC+G S ++H + G S + V N+LID Y +C L DA K+F+
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL 193
+M+ ER ++WN+M+ G + GE+ L
Sbjct: 179 KMS-------------------------------ERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
F EM + RD++ W N++L YA+
Sbjct: 208 FDEMPQ--------------------RDLI------------SW-------NTMLDGYAR 228
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP--DKNIVSWTSMIV 311
S A E+F N VSW+ ++ + K GD + A + F + P KN+V+WT +I
Sbjct: 229 CREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIA 288
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY G + A + M + ++ D ++L AC +L+ G +HS + R L
Sbjct: 289 GYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGS 348
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
+V N+L++MYAKCG+L+ + F I +KDLVSWN+ML G+HG EA+ LF M
Sbjct: 349 NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMR 408
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
G++PD+VTF +L +C+H GLIDEG +F SM + L ++H C+VD+LGR G +
Sbjct: 409 REGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRL 468
Query: 492 AEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSN 551
EA + + + LLGAC H ++ V + L L+P Y +LSN
Sbjct: 469 KEAIKVVQTMPMEPNVVI--WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSN 526
Query: 552 LYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
+Y A+ W+ +R +M GV+K G+S +E+ + + F + S P I +L
Sbjct: 527 IYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQML 584
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 129/302 (42%), Gaps = 64/302 (21%)
Query: 12 TSKIVSLARSGRICHARKLFDEMP--DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN 69
++ ++ +++G + AR +FD+MP ++ V W +I Y+ GL +++ L M S
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 70 SKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
K D+ + + L+AC G IH+++ S S+ V N+L+DMY KC + +
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC---GNLK 367
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
K FD VF +P++ ++WNTM+ G G +
Sbjct: 368 KAFD----------------------------VFNDIPKKDLVSWNTMLHGLGVHGHGKE 399
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
+ LF M +PD+ TF A++ +C H +I G +
Sbjct: 400 AIELFSRMRREGIRPDKVTFIAVLCSCN-----------HAGLIDEG-----------ID 437
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP-DKNIVSWTS 308
++ +E D + +G ++D ++G ++A Q P + N+V W +
Sbjct: 438 YFYSMEKVYDLVPQVEHYG--------CLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 309 MI 310
++
Sbjct: 490 LL 491
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/586 (27%), Positives = 291/586 (49%), Gaps = 68/586 (11%)
Query: 13 SKIVSLA-RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
SK+V + + G I +AR++FD M +R V WN++I ++++ ++ M +N
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYR-SSLPVANSLIDMYGKCLKPHDARK 130
PD ++ S+ A + S H L V+ G S++ V ++L+DMY K K +A+
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
V D + + + V +L I G++++GE
Sbjct: 223 VLDRVEEKDVVLITAL-------------------------------IVGYSQKGEDTEA 251
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
+ F+ M QP+++T+++++ +C +D+ G ++HG ++KSG+ SA+ + S+L+
Sbjct: 252 VKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTM 311
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
Y + D++ +F NQVSW TS+I
Sbjct: 312 YLRCSLVDDSLRVFKCIEYPNQVSW-------------------------------TSLI 340
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLD 370
G +NG E+AL F M R+SI+ ++ + L C++LA+ G+ +H + + G D
Sbjct: 341 SGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFD 400
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
+ + G+ L+++Y KCG + + L F + E D++S N+M++++ +G EA+ LF M
Sbjct: 401 RDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERM 460
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
+ G++P++VT +L+ C++ L++EG F S + + DH ACMVD+LGR G
Sbjct: 461 INLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGR 519
Query: 491 VAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLS 550
+ EA+ L ++ + LL AC H + + + +EP E +++S
Sbjct: 520 LEEAEMLT---TEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMS 576
Query: 551 NLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGN 596
NLY ++G+W ++ +M D +KK P SW+EI F++G+
Sbjct: 577 NLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGD 622
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 162/350 (46%), Gaps = 31/350 (8%)
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
E++ L+ A A +VF M ER + WN++IA + + + +++ M
Sbjct: 99 EISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMIT 158
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
+ PD++T S++ A ++ HG + G +EV N +
Sbjct: 159 NNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILG----LEVSNVFVG---------- 204
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
+A++D ++K G T++A L + +K++V T++IVGY++ G
Sbjct: 205 ----------------SALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGED 248
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSL 379
A+ F M +Q + +VL +C +L + +GK++H +++ G + L SL
Sbjct: 249 TEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSL 308
Query: 380 VNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDE 439
+ MY +C ++ S F I + VSW S++ +GR A+ FR+M+ +KP+
Sbjct: 309 LTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNS 368
Query: 440 VTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGG 489
T + L CS+L + +EG + +++G + ++D+ G+ G
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQ-IHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/586 (30%), Positives = 279/586 (47%), Gaps = 69/586 (11%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G I +AR++FD MP+R+ V+W A+IT Y G Q+ LF SM +S+ P+ F+ S
Sbjct: 107 AKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLS 165
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC---LKPHDARKVFDEM 135
+ L++C + G +H L + G S+ VAN++I MYG+C ++A VF+ +
Sbjct: 166 SVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI 221
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
N VTW S++ A+ +L A+ VF M ++ G R
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM--------HSDGVGFDR--------ATLL 265
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+C SLY+ + + C + +H +KSG + EV +++ Y+
Sbjct: 266 NICSSLYKSSDLVPNEVSKCCLQ---------LHSLTVKSGLVTQTEVATALIKVYS--- 313
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
EM + D K F+ D IV+W +I +
Sbjct: 314 ------EMLEDYT------------------DCYKLFMEMSHCRD--IVAWNGIITAFAV 347
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
+ E A+ +F + + + D +VL ACA L H +H+ +I+ G +
Sbjct: 348 Y-DPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVL 406
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
NSL++ YAKCG L+ F + +D+VSWNSML A+ LHG+ + + +F++M +
Sbjct: 407 NNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DI 463
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
PD TF +L CSH G ++EG FRSM + ++H AC++DML R AEA+
Sbjct: 464 NPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAE 523
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTL-EPEKEVGYVMLSNLYC 554
+ K+ A + LLG+C HG+ G + LK L EP + Y+ +SN+Y
Sbjct: 524 EVIKQMPMDPDAVV--WIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYN 581
Query: 555 ASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP 600
A G + EA + KEM V+K P SW EI N V F SG P
Sbjct: 582 AEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRP 627
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 176/415 (42%), Gaps = 87/415 (20%)
Query: 53 GLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSH--HGFGSVIHALVVVSGYRSSLP 110
G ++++SLF S + + Y+A ACA + G H L Y ++
Sbjct: 40 GDIRRAVSLFYSAPVELQSQQA--YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVI 97
Query: 111 VANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV 170
+AN LI+MY KC AR+VFD +MPER
Sbjct: 98 LANFLINMYAKCGNILYARQVFD-------------------------------TMPERN 126
Query: 171 EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHG 230
++W +I G+ + G + LF M + P+++T S+++ +C G VHG
Sbjct: 127 VVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRYEP----GKQVHG 181
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQK 290
+K G ++ V N+++S Y + D + ++ F + +
Sbjct: 182 LALKLGLHCSIYVANAVISMYGRCH---DGAAAYEAWTVFEAIKF--------------- 223
Query: 291 AFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACAS 350
KN+V+W SMI + G+ A+ +F+ M + + D +L+ C+S
Sbjct: 224 ----------KNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDR---ATLLNICSS 270
Query: 351 L---AILAHGKM------VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE 401
L + L ++ +HS ++ GL V +L+ +Y++ LE + +E
Sbjct: 271 LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM--LEDYTDCYKLFME 328
Query: 402 ----KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
+D+V+WN ++ AF ++ A+ LF ++ + PD TF+ +L C+ L
Sbjct: 329 MSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGL 382
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 46/275 (16%)
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
R G++ + LF L Q ++AL AC E R++L G +H ++ + +
Sbjct: 38 RSGDIRRAVSLFYSAPVEL--QSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 243 V--KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD 300
V N +++ YAK A ++F++ N VSW A+I +++ G+ Q+ F F
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF----- 150
Query: 301 KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
+SM+ N E LS +VL +C GK V
Sbjct: 151 ------SSMLSHCFPN---EFTLS------------------SVLTSCR----YEPGKQV 179
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA---FCGILEKDLVSWNSMLFAFGLH 417
H ++ GL ++V N++++MY +C D + A F I K+LV+WNSM+ AF
Sbjct: 180 HGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCC 239
Query: 418 GRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
+A+ +F M + GV D T +L CS L
Sbjct: 240 NLGKKAIGVFMRMHSDGVGFDRAT---LLNICSSL 271
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 30/174 (17%)
Query: 11 TTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
S I + A+ G + ++FD+M RD V+WN+M+ AYS G L +F M I+
Sbjct: 407 NNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDIN-- 464
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYR---------SSLPVAN---SLIDM 118
PDS ++ A LSAC+ HA V G R +LP N +IDM
Sbjct: 465 -PDSATFIALLSACS-----------HAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDM 512
Query: 119 YGKCLKPHDARKVFDEMA-DSNEVTWCSLLFA---YANSSLFGMALEVFRSMPE 168
+ + +A +V +M D + V W +LL + + N+ L +A + + + E
Sbjct: 513 LSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE 566
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVA-GAVLHACASLAILAHGKMVHSCIIRRGL--D 370
R+G+ A+S+F ++L + A A+ ACA L G +H ++
Sbjct: 37 VRSGDIRRAVSLFYSAP---VELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYS 93
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
+ + + N L+NMYAKCG++ + F + E+++VSW +++ + G E CLF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 431 VASGVKPDEVTFTGMLMTCSH 451
+ S P+E T + +L +C +
Sbjct: 154 L-SHCFPNEFTLSSVLTSCRY 173
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 278/560 (49%), Gaps = 70/560 (12%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
R++FD +D+++W +M++ Y + ++L +F M + F+ S+A+ AC+
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
G H +V+ G+ + ++++L +YG +P DAR+VFDEM
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEM----------- 224
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL-YQPD 205
PE I W +++ ++ E LGLF M PD
Sbjct: 225 --------------------PEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPD 264
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
TF ++ AC R + G +HG +I +G S + V++S+L Y K
Sbjct: 265 GSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKC----------- 313
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
G ++A F KN VSW++++ GY +NG E A+ +
Sbjct: 314 --------------------GSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
F +M + D G VL ACA LA + GK +H +RRG + V ++L+++Y K
Sbjct: 354 FREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK 409
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
G ++ ++ + + +++++WN+ML A +GR EA+ F +MV G+KPD ++F +
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTS 505
L C H G++DEG +F M+ +G+ G +H +CM+D+LGR G EA++L ++ +
Sbjct: 470 LTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRN 529
Query: 506 GARTNSYEVLLGACHAHGDLG-TGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
A + + VLLG C A+ D + + + LEP+ + YV+LSN+Y A G+ +A
Sbjct: 530 DA--SLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALN 587
Query: 565 VRKEMLDQGVKKVPGSSWIE 584
+RK M+ +GV K G SWI+
Sbjct: 588 IRKLMVRRGVAKTVGQSWID 607
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Query: 288 TQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHA 347
+Q A L + + + S I+ + G A+ + + I + ++L
Sbjct: 11 SQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQT 70
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD-LEGSALAFCGILEKDLVS 406
C + HG H+ +++ GL+ VGNSL+++Y K G + + F G KD +S
Sbjct: 71 CNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAIS 130
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
W SM+ + +A+ +F EMV+ G+ +E T + + CS LG + G F
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
+SG I A +++ +M R+ + WNAM++A + G ++++S F M KPD S+
Sbjct: 408 GKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFI 467
Query: 79 AALSACAGGSHHGFGSVIHALVVVS-GYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
A L+AC G L+ S G + + +ID+ G+ +A + +
Sbjct: 468 AILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAEC 527
Query: 138 SNEVT-WCSLL 147
N+ + W LL
Sbjct: 528 RNDASLWGVLL 538
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 176/591 (29%), Positives = 268/591 (45%), Gaps = 65/591 (10%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G++ A KLFDEMP RD ++ N + + + L M + + D + +
Sbjct: 101 AKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-LGSGGFDHATLT 159
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
LS C +IHAL ++SGY + V N LI Y KC R VFD M+
Sbjct: 160 IVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHR 219
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
N +T +++ + L L +F M RRG
Sbjct: 220 NVITLTAVISGLIENELHEDGLRLFSLM----------------RRG------------- 250
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
L P+ T+ + + AC+ S+ ++ G +H + K G S + ++++++ Y+K
Sbjct: 251 --LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIE 308
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
DA +F S ++VS I +VG +NG+
Sbjct: 309 DAWTIFESTTEVDEVSMTVI-------------------------------LVGLAQNGS 337
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
E A+ F+ M + +++D V AVL L GK +HS +I+R FV N
Sbjct: 338 EEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNG 397
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L+NMY+KCGDL S F + +++ VSWNSM+ AF HG A+ L+ EM VKP
Sbjct: 398 LINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPT 457
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
+VTF +L CSH+GLID+G M G+ +H C++DMLGR G + EA+S
Sbjct: 458 DVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFI 517
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
+ ++ LLGAC HGD G E L P+ +++++N+Y + G+
Sbjct: 518 DSLPLKPDCKI--WQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGK 575
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
WKE K M GV K G S IEI + +FV + P I ++L
Sbjct: 576 WKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVL 626
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 168/406 (41%), Gaps = 64/406 (15%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I S + G R +FD M R+ + A+I+ L++ L LF MR P+S
Sbjct: 197 ITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNS 256
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+Y +AL+AC+G G IHAL+ G S L + ++L+DMY KC DA
Sbjct: 257 VTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDA------ 310
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
W +F S E E++ ++ G A+ G E + F
Sbjct: 311 --------WT-----------------IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFF 345
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
M ++ + D SA++ + G +H VIK +S V N +++ Y+K
Sbjct: 346 IRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
+D+ +F N VSWN SMI +
Sbjct: 406 GDLTDSQTVFRRMPKRNYVSWN-------------------------------SMIAAFA 434
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK-MVHSCIIRRGLDKYL 373
R+G+G AL ++ +MT ++ ++ ++LHAC+ + ++ G+ +++ G++
Sbjct: 435 RHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRT 494
Query: 374 FVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFGLHG 418
+++M + G L E + L+ D W ++L A HG
Sbjct: 495 EHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 180/421 (42%), Gaps = 47/421 (11%)
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCES 200
V W SLL YA A+++F MP R I+ N + G R E E+ L K M S
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
D T + +++ C L M+H I SG+ + V N +++ Y K C
Sbjct: 151 -GGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS--- 206
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
+ G F+ +S +N+++ T++I G N E
Sbjct: 207 ---VSGRGVFDGMS-------------------------HRNVITLTAVISGLIENELHE 238
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
L +F M R + +++ + L AC+ + G+ +H+ + + G++ L + ++L+
Sbjct: 239 DGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALM 298
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+MY+KCG +E + F E D VS +L +G EA+ F M+ +GV+ D
Sbjct: 299 DMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDAN 358
Query: 441 TFTGML---MTCSHLGLIDE--GFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
+ +L + LGL + R S +++G +++M + G + ++Q
Sbjct: 359 VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNG------LINMYSKCGDLTDSQ 412
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCA 555
++ ++ K + NS ++ A HG + E + TLE K LS L+
Sbjct: 413 TVFRRMPKRNYVSWNS---MIAAFARHGHGLAALKLYEEMTTLEV-KPTDVTFLSLLHAC 468
Query: 556 S 556
S
Sbjct: 469 S 469
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 260/534 (48%), Gaps = 65/534 (12%)
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
D Y+ L C G ++HA ++ S +R + + N+L++MY KC +ARKVF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
++ MP+R + W T+I+G+++ L
Sbjct: 119 EK-------------------------------MPQRDFVTWTTLISGYSQHDRPCDALL 147
Query: 193 LFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
F +M Y P+++T S+++ A R G +HGF +K G+ S + V +++L Y
Sbjct: 148 FFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYT 207
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVG 312
+ DA +F++ + +N VSW ++I G
Sbjct: 208 RYGLMDDAQLVFDALES-------------------------------RNDVSWNALIAG 236
Query: 313 YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY 372
+ R E AL +F M R+ + + ++ AC+S L GK VH+ +I+ G
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 373 LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
F GN+L++MYAK G + + F + ++D+VSWNS+L A+ HG EA+ F EM
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVA 492
G++P+E++F +L CSH GL+DEG+ ++ M + G+ H +VD+LGR G +
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLN 415
Query: 493 EAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNL 552
A ++ A ++ LL AC H + G+ E++ L+P+ +V+L N+
Sbjct: 416 RALRFIEEMPIEPTAAI--WKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 553 YCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADIS 606
Y + G+W +A VRK+M + GVKK P SW+EI N + FV+ + P +I+
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIA 527
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 174/401 (43%), Gaps = 65/401 (16%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G + ARK+F++MP RD V W +I+ YS +L F M P+ F+ S
Sbjct: 106 AKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ + A A G +H V G+ S++ V ++L+D+Y + DA+ VFD +
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR 225
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
N+V+W +L+ +A RR E L LF+ M
Sbjct: 226 NDVSWNALIAGHA-------------------------------RRSGTEKALELFQGML 254
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
++P +++++L AC+ + + G VH ++IKSG N++L YAK
Sbjct: 255 RDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 314
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
DA ++F+ + VSWN S++ Y ++G
Sbjct: 315 DARKIFDRLAKRDVVSWN-------------------------------SLLTAYAQHGF 343
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
G+ A+ F +M R I+ + + +VL AC+ +L G + + + G+ + +
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 379 LVNMYAKCGDLEGSALAFCG--ILEKDLVSWNSMLFAFGLH 417
+V++ + GDL AL F +E W ++L A +H
Sbjct: 404 VVDLLGRAGDL-NRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 117/285 (41%), Gaps = 44/285 (15%)
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
D+ + I D +L C +L G++VH+ I++ + +GN+L+NMYAKCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT---- 443
LE + F + ++D V+W +++ + H R +A+ F +M+ G P+E T +
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 444 ---------------GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRG 488
G + C + G A + + +GL MD + D L
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALL-DLYTRYGL---MDDAQLVFDALESR 225
Query: 489 GYVAEAQSLAKKYSKTSGARTN-----------------SYEVLLGACHAHGDLGTGSSV 531
V+ +L +++ SG SY L GAC + G L G V
Sbjct: 226 NDVS-WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 532 GEYLKTLEPEKEVGYV--MLSNLYCASGQWKEAEIVRKEMLDQGV 574
Y+ EK V + L ++Y SG +A + + + V
Sbjct: 285 HAYM-IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 4 MRSYLFQTTSKIVSLA---------RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGL 54
+ +Y+ ++ K+V+ A +SG I ARK+FD + RD V+WN+++TAY+ G
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 55 YQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGF---GSVIHALVVVSGYRSSLPV 111
++++ F MR +P+ S+ + L+AC SH G G + L+ G
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTAC---SHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 112 ANSLIDMYGKCLKPHDARKVFDEMA-DSNEVTWCSLLFA---YANSSLFGMALE-VFRSM 166
+++D+ G+ + A + +EM + W +LL A + N+ L A E VF
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELD 460
Query: 167 PE 168
P+
Sbjct: 461 PD 462
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/684 (26%), Positives = 308/684 (45%), Gaps = 113/684 (16%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G + AR++FD MP+R+ V++ ++IT YS G +++ L+ M + PD F++ +
Sbjct: 114 KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGS 173
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
+ ACA S G G +HA V+ S L N+LI MY + F++M+D
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVR----------FNQMSD-- 221
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG-EVEACLGLFKEMC 198
A VF +P + I+W+++IAG ++ G E EA L KEM
Sbjct: 222 -------------------ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA-LSHLKEML 261
Query: 199 E-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
++ P+++ F + + AC+ YG +HG IKS + S+ YA+
Sbjct: 262 SFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFL 321
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ------APD----------- 300
+ A +F+ + SWN II G +A F Q PD
Sbjct: 322 NSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQ 381
Query: 301 -------------KNIVSW---------TSMIVGYTRNGNGELALSMFLDMTRN--SIQL 336
I+ W S++ YT + ++F D N S+
Sbjct: 382 TKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSW 441
Query: 337 DNLVAGAVLH------------------------------ACASLAILAHGKMVHSCIIR 366
+ ++ + H C ++ L G VH ++
Sbjct: 442 NTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLK 501
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
GL F+ N L++MYAKCG L + F + +D+VSW++++ + G EA+ L
Sbjct: 502 TGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALIL 561
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
F+EM ++G++P+ VTF G+L CSH+GL++EG + +M +E G+S +H +C+VD+L
Sbjct: 562 FKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLA 621
Query: 487 RGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGY 546
R G + EA+ + ++ LL AC G++ E + ++P +
Sbjct: 622 RAGRLNEAERFIDEMKLEPDVVV--WKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAH 679
Query: 547 VMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADIS 606
V+L +++ +SG W+ A ++R M VKK+PG SWIEI + + F + + P DI
Sbjct: 680 VLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIY 739
Query: 607 NILYFL------EIEMRHTRPINF 624
+L+ + E +H + + F
Sbjct: 740 TVLHNIWSQMLDECNPQHKKRLQF 763
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 183/406 (45%), Gaps = 64/406 (15%)
Query: 43 NAMITAYSHLGLYQQSLSLFG-SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
N I + Y+++L F + + S+ K +Y + + AC+ G IH ++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
S + + N ++ MYGKC DAR+VFD
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFD---------------------------- 126
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
MPER +++ ++I G+++ G+ + L+ +M + PDQ+ F +++ AC S D
Sbjct: 127 ---FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD 183
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
+ G +H VIK SS + +N++++ Y + FNQ+S
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVR----------------FNQMS------- 220
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI-QLDNLV 340
D + F P K+++SW+S+I G+++ G ALS +M + + +
Sbjct: 221 -----DASRVFYGI---PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 341 AGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL 400
G+ L AC+SL +G +H I+ L G SL +MYA+CG L + F I
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 401 EKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
D SWN ++ +G A+EA+ +F +M +SG PD ++ +L
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 40/333 (12%)
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
T+ +L+ AC+ SR + G +H ++ S + N ILS Y K DA E+F+
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD-- 126
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
F+ P++N+VS+TS+I GY++NG G A+ ++L
Sbjct: 127 ------------------------FM-----PERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
M + + D G+++ ACAS + + GK +H+ +I+ +L N+L+ MY +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV-KPDEVTFTGML 446
+ ++ F GI KDL+SW+S++ F G EA+ +EM++ GV P+E F L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 447 MTCSHLGLIDEGFAFF-RSMSSEFGLSHGMDHVAC-MVDMLGRGGYVAEAQSLAKKYSKT 504
CS L D G + SE G C + DM R G++ A+ + + +
Sbjct: 278 KACSSLLRPDYGSQIHGLCIKSELA---GNAIAGCSLCDMYARCGFLNSAR---RVFDQI 331
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKT 537
T S+ V++ +G SV +++
Sbjct: 332 ERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 290/601 (48%), Gaps = 67/601 (11%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI--SNSKPDSFS 76
++ G I +A+ +F +++ V+WN M+ +S G + + M + K D +
Sbjct: 338 SKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT 397
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
A+ C + S LP SL +++ LK
Sbjct: 398 ILNAVPVCF-------------------HESFLP---SLKELHCYSLKQEFV-------- 427
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
NE+ + + +YA A VF + + +WN +I GHA+ + L +
Sbjct: 428 -YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 486
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
M S PD +T +L++AC++ + + G VHGF+I++ + V S+LS Y + C
Sbjct: 487 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY--IHC 544
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
+L Q F A + DK++VSW ++I GY +N
Sbjct: 545 G--------------------------ELCTVQALFDAME---DKSLVSWNTVITGYLQN 575
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G + AL +F M IQL + V AC+ L L G+ H+ ++ L+ F+
Sbjct: 576 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK 436
SL++MYAK G + S+ F G+ EK SWN+M+ +G+HG A EA+ LF EM +G
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 695
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA-Q 495
PD++TF G+L C+H GLI EG + M S FGL + H AC++DMLGR G + +A +
Sbjct: 696 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCA 555
+A++ S+ A ++ LL +C H +L G V L LEPEK YV+LSNLY
Sbjct: 756 VVAEEMSEE--ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAG 813
Query: 556 SGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIE 615
G+W++ VR+ M + ++K G SWIE+ V +FV G +I ++ LE++
Sbjct: 814 LGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMK 873
Query: 616 M 616
+
Sbjct: 874 I 874
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 196/446 (43%), Gaps = 65/446 (14%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T I A G +R +FD + ++ WNA+I++YS LY + L F M IS +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM-ISTTD 182
Query: 72 --PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
PD F+Y + ACAG S G G +H LVV +G + V N+L+ YG DA
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
++FD M + N V+W S++ ++++ G + E F + E +E
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDN---GFSEESFLLLGEMME------------------ 281
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
E + + PD T ++ C R++ G VHG+ +K + + N+++
Sbjct: 282 ------ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMD 335
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
Y+K C ++A +F N VSWN ++ GDT F +Q M
Sbjct: 336 MYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ-----------M 384
Query: 310 IVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL 369
+ G GE D+ + + + N V C + L K +H +++
Sbjct: 385 LAG------GE-------DVKADEVTILNAVP-----VCFHESFLPSLKELHCYSLKQEF 426
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE---AMCL 426
V N+ V YAKCG L + F GI K + SWN+++ G H ++N+ ++
Sbjct: 427 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI---GGHAQSNDPRLSLDA 483
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHL 452
+M SG+ PD T +L CS L
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKL 509
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 19/257 (7%)
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL- 336
II + G + F KN+ W ++I Y+RN + L F++M + L
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
D+ V+ ACA ++ + G VH +++ GL + +FVGN+LV+ Y G + + F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS----GVKPDEVTFTGMLMTCSH- 451
+ E++LVSWNSM+ F +G + E+ L EM+ PD T +L C+
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 452 ----LGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGA 507
LG G+A + E L++ ++DM + G + AQ + + +
Sbjct: 306 REIGLGKGVHGWAVKLRLDKELVLNNA------LMDMYSKCGCITNAQMI---FKMNNNK 356
Query: 508 RTNSYEVLLGACHAHGD 524
S+ ++G A GD
Sbjct: 357 NVVSWNTMVGGFSAEGD 373
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 161/410 (39%), Gaps = 73/410 (17%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
+ S A+ G + +A+++F + + +WNA+I ++ + SL M+IS PDS
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
F+ + LSAC+ G +H ++ + L V S++ +Y C + + +FD
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
M D + V+W +++ Y + AL VFR M + + + G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQM-----VLYGIQLCG-------------- 597
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
+ + AC+ + G H + +K + S++ YAK
Sbjct: 598 ------------ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
+ + ++FN + SWNA MI+GY
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNA-------------------------------MIMGYG 674
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-----KMVHSCIIRRGL 369
+G + A+ +F +M R D+L VL AC ++ G +M S ++ L
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGIL--EKDLVSWNSMLFAFGLH 417
Y V ++M + G L+ + + E D+ W S+L + +H
Sbjct: 735 KHYACV----IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 780
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSL 61
H + F S I A++G I + K+F+ + ++ + +WNAMI Y GL ++++ L
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 685
Query: 62 FGSMRISNSKPDSFSYSAALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMY 119
F M+ + PD ++ L+AC +G H G + + G + +L +IDM
Sbjct: 686 FEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL-RYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 120 GKCLKPHDA-RKVFDEMADSNEV-TWCSLLFAYANSSLFGM----ALEVFRSMPERVE-- 171
G+ + A R V +EM++ +V W SLL + M A ++F PE+ E
Sbjct: 745 GRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENY 804
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEM 197
+ + + AG + +V EM
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEM 830
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/599 (28%), Positives = 278/599 (46%), Gaps = 66/599 (11%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G + AR +F+ + +D V W +++ Y G ++ SL L MR++ P+++++ AL
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
A G F +H ++ + Y V L+ +Y + DA KVF+EM
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEM------ 308
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
P+ + W+ MIA + G + LF M E+
Sbjct: 309 -------------------------PKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
P+++T S+++N C + G +HG V+K G+ + V N+++ YAK E A+
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAV 403
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
++F + N+VSWN +I + LG+ KAF
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAF----------------------------- 434
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
SMF + RN + + + + L ACASLA + G VH I+ K + V NSL++
Sbjct: 435 --SMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLID 492
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MYAKCGD++ + F + D+ SWN+++ + HG +A+ + M KP+ +T
Sbjct: 493 MYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
F G+L CS+ GLID+G F SM + G+ ++H CMV +LGR G + +A L +
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI 612
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKE 561
+ +L A + E + + P+ E YV++SN+Y + QW
Sbjct: 613 PYEPSVMI--WRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 562 AEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRHTR 620
+RK M + GVKK PG SWIE + V F G + P M I+ +L +L M+ TR
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWL--NMKATR 727
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 209/492 (42%), Gaps = 51/492 (10%)
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
DS +Y A L C + IH ++ G L N L++ Y K DA +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
DEM + N V++ +L YA G+ + R E + + + + E C
Sbjct: 108 DEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 193 LFKEMCESLYQPDQWTFSALMNA------CTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
L + + Y + + +AL+NA +R + G + V+ +G S V+N
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY-VENG 226
Query: 247 ILSFYAK-LECPSDAMEMFNSF------------GAFN-------QVSWN---------- 276
K L C A M N++ GAF+ Q+
Sbjct: 227 YFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGV 286
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
++ + +LGD AF F + P ++V W+ MI + +NG A+ +F+ M +
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
+ ++L+ CA G+ +H +++ G D ++V N+L+++YAKC ++ + F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
+ K+ VSWN+++ + G +A +FRE + + V EVTF+ L C+ L +D
Sbjct: 407 AELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMD 466
Query: 457 -----EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
G A + + + +S+ ++DM + G + AQS+ +++ S
Sbjct: 467 LGVQVHGLAIKTNNAKKVAVSNS------LIDMYAKCGDIKFAQSV---FNEMETIDVAS 517
Query: 512 YEVLLGACHAHG 523
+ L+ HG
Sbjct: 518 WNALISGYSTHG 529
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
++ + + I A+ ++ A KLF E+ ++ V+WN +I Y +LG ++ S+F
Sbjct: 383 IYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR 442
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ ++S+AL ACA + G +H L + + + V+NSLIDMY KC
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER 169
A+ VF+EM + +W +L+ Y+ L AL + M +R
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 87/195 (44%), Gaps = 8/195 (4%)
Query: 11 TTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
+ S I A+ G I A+ +F+EM D +WNA+I+ YS GL +Q+L + M+ +
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDC 546
Query: 71 KPDSFSYSAALSACAGGSHHGFGS-VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
KP+ ++ LS C+ G +++ G L ++ + G+ + A
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 130 KVFDEMA-DSNEVTWCSLLFAYANSSLFGMAL----EVFRSMP--ERVEIAWNTMIAGHA 182
K+ + + + + + W ++L A N + A E+ + P E + + M AG
Sbjct: 607 KLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666
Query: 183 RRGEVEACLGLFKEM 197
+ V + KEM
Sbjct: 667 QWANVASIRKSMKEM 681
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/588 (29%), Positives = 286/588 (48%), Gaps = 41/588 (6%)
Query: 35 PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGS 94
P+ + +N MI+A S + L+ SM PD ++ + A + S
Sbjct: 96 PNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSE---VK 150
Query: 95 VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSS 154
IH ++VSG L + N L W SL+ Y
Sbjct: 151 QIHCHIIVSG---CLSLGNYL---------------------------WNSLVKFYMELG 180
Query: 155 LFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMN 214
FG+A +VF MP ++N MI G+A++G L L+ +M +PD++T +L+
Sbjct: 181 NFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLV 240
Query: 215 ACTESRDMLYGCMVHGFVIKSG--WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
C D+ G VHG++ + G +SS + + N++L Y K + A F++ +
Sbjct: 241 CCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDM 300
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL-SMFLDMT- 330
SWN ++ ++LGD + A F Q P +++VSW S++ GY++ G + + +F +MT
Sbjct: 301 RSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTI 360
Query: 331 RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
++ D + +++ A+ L+HG+ VH +IR L F+ ++L++MY KCG +E
Sbjct: 361 VEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 391 GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS 450
+ + F EKD+ W SM+ HG +A+ LF M GV P+ VT +L CS
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 451 HLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN 510
H GL++EG F M +FG +H +VD+L R G V EA+ + +K +++
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQS- 539
Query: 511 SYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEML 570
+ +L AC D+ T L LEPEKE GYV+LSN+Y G+W ++ R+ M
Sbjct: 540 MWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAME 599
Query: 571 DQGVKKVPG-SSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
++GVKK G SS + + + + + P +I IL L EM+
Sbjct: 600 NRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 36/369 (9%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A K+F MP D ++N MI Y+ G ++L L+ M +PD ++ + L C
Sbjct: 185 AEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 87 GSHHGFGSVIHALVVVSG--YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWC 144
S G +H + G Y S+L ++N+L+DMY KC + A++ FD M + +W
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 145 SLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG-EVEACLGLFKEMC-ESLY 202
+++ + A VF MP+R ++WN+++ G++++G + LF EM
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV 364
Query: 203 QPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAME 262
+PD+ T +L++ + ++ +G VHG VI +L+ DA
Sbjct: 365 KPDRVTMVSLISGAANNGELSHGRWVHGLVI-------------------RLQLKGDA-- 403
Query: 263 MFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELA 322
F S +A+ID + K G ++AF+ F+ A +K++ WTSMI G +GNG+ A
Sbjct: 404 -FLS---------SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQA 453
Query: 323 LSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVN 381
L +F M + +N+ AVL AC+ ++ G V + + + G D SLV+
Sbjct: 454 LQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 382 MYAKCGDLE 390
+ + G +E
Sbjct: 514 LLCRAGRVE 522
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 292 FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASL 351
FL F P+ N+ + +MI + + N ++ M R+ + D L+ +
Sbjct: 91 FLNF--TPNPNVFVYNTMISAVSSSKNE--CFGLYSSMIRHRVSPDR---QTFLYLMKAS 143
Query: 352 AILAHGKMVHSCIIRRG---LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWN 408
+ L+ K +H II G L YL+ NSLV Y + G+ + F + D+ S+N
Sbjct: 144 SFLSEVKQIHCHIIVSGCLSLGNYLW--NSLVKFYMELGNFGVAEKVFARMPHPDVSSFN 201
Query: 409 SMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
M+ + G + EA+ L+ +MV+ G++PDE T +L+ C HL I G
Sbjct: 202 VMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 280/592 (47%), Gaps = 76/592 (12%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ G++ A LFD +RD V+WN++I+ Y +G ++ L+L M +++
Sbjct: 194 SKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALG 253
Query: 79 AALSACAGGSHHGF---GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
+ L AC + GF G IH G + V +L+DMY K
Sbjct: 254 SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAK-------------- 299
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV-----EAC 190
N SL A+++F MP + + +N MI+G + E+
Sbjct: 300 ----------------NGSL-KEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
LF +M +P TFS ++ AC+ ++ + YG +H + K+ + S
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS----------- 391
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
++ +A+I+ + +G T+ F ++I SWTSMI
Sbjct: 392 --------------------DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI 431
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLD 370
+ +N E A +F + + I+ + ++ ACA A L+ G+ + I+ G+D
Sbjct: 432 DCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGID 491
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
+ V S ++MYAK G++ + F + D+ ++++M+ + HG ANEA+ +F M
Sbjct: 492 AFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
G+KP++ F G+L+ C H GL+ +G +F+ M +++ ++ H C+VD+LGR G
Sbjct: 552 KTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGR 611
Query: 491 VAEAQSLAKKYSKTSGARTN--SYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVM 548
+++A++L +SG + + ++ LL +C + D G V E L LEPE YV+
Sbjct: 612 LSDAENLI----LSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVL 667
Query: 549 LSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSP 600
L N+Y SG AE VR+ M D+GVKK P SWI I N +F + S P
Sbjct: 668 LHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHP 719
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/529 (25%), Positives = 239/529 (45%), Gaps = 80/529 (15%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
AR+LFD MP+R+ +++N++I+ Y+ +G Y+Q++ LF R +N K D F+Y+ AL C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
G ++H LVVV+G + + N LIDMY KC K A +FD C
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR---------CD- 210
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
ER +++WN++I+G+ R G E L L +M
Sbjct: 211 ---------------------ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTT 249
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
+ +++ AC + + GF+ E +I + AKL ME
Sbjct: 250 YALGSVLKACCINLN-------EGFI---------EKGMAIHCYTAKL-----GME---- 284
Query: 267 FGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY------TRNGNGE 320
F+ V A++D + K G ++A F P KN+V++ +MI G+ T + E
Sbjct: 285 ---FDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
A +F+DM R ++ VL AC++ L +G+ +H+ I + F+G++L+
Sbjct: 342 -AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALI 400
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+YA G E F ++D+ SW SM+ + + A LFR++ +S ++P+E
Sbjct: 401 ELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEY 460
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACM----VDMLGRGGYVAEAQS 496
T + M+ C+ + G + + G+D + + M + G + A
Sbjct: 461 TVSLMMSACADFAALSSG-----EQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQ 515
Query: 497 LAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKT--LEPEKE 543
+ + + +Y ++ + HG ++ E +KT ++P ++
Sbjct: 516 V---FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQ 561
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 153/343 (44%), Gaps = 46/343 (13%)
Query: 163 FRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQP-----DQWTFSALMNACT 217
FR+ IA ++++ +R +GL SL QP D + L
Sbjct: 5 FRAKTFFNNIAQDSLVTLITKR------VGLGYRFLSSLCQPKNTALDSEGYKILFQTAA 58
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
+S ++ G + HG +IKS + + + N++L+ Y K A ++F+
Sbjct: 59 KSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD------------ 106
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD 337
+ P++NI+S+ S+I GYT+ G E A+ +FL+ +++LD
Sbjct: 107 -------------------RMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLD 147
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFC 397
L C L G+++H ++ GL + +F+ N L++MY+KCG L+ + F
Sbjct: 148 KFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFD 207
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS---HLGL 454
E+D VSWNS++ + G A E + L +M G+ +L C + G
Sbjct: 208 RCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGF 267
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
I++G A +++ G+ + ++DM + G + EA L
Sbjct: 268 IEKGMA-IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKL 309
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
GK+ H +I+ L+ L++ N+L+NMY KC +L + F + E++++S+NS++ +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
G +AM LF E + +K D+ T+ G L C +D G + GLS +
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLHGLVVVNGLSQQVF 184
Query: 477 HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEV-------------LLGACHAHG 523
+ ++DM + G + +A SL + + NS LL H G
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 524 DLGTGSSVGEYLKTLEPEKEVGYV---MLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGS 580
T ++G LK G++ M + Y A + +VR +LD K
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 581 SWIEI------RNVVT--AFVSG 595
I++ +NVVT A +SG
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISG 327
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 269/544 (49%), Gaps = 42/544 (7%)
Query: 114 SLIDMYG--KCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE 171
++D Y + L+ +R + +++ N L+ AYA+ A +VF +PER
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLR-CNSSLGVKLMRAYASLKDVASARKVFDEIPERNV 105
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGF 231
I N MI + G + +F MC +PD +TF ++ AC+ S ++ G +HG
Sbjct: 106 IIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGS 165
Query: 232 VIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAH---MKLGD- 287
K G SS + V N ++S Y K S+A + + + VSWN+++ + + D
Sbjct: 166 ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDA 225
Query: 288 -----------------TQKAFLA----------------FQQAPDKNIVSWTSMIVGYT 314
T + L F + K++VSW MI Y
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYM 285
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
+N A+ ++ M + + D + +VL AC + L+ GK +H I R+ L L
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
+ N+L++MYAKCG LE + F + +D+VSW +M+ A+G GR +A+ LF ++ SG
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
+ PD + F L CSH GL++EG + F+ M+ + ++ ++H+ACMVD+LGR G V EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 495 QSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYC 554
+ S R + LLGAC H D G + L L PE+ YV+LSN+Y
Sbjct: 466 YRFIQDMSMEPNERV--WGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYA 523
Query: 555 ASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEI 614
+G+W+E +R M +G+KK PG+S +E+ ++ F+ G+ S P +I L L
Sbjct: 524 KAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVK 583
Query: 615 EMRH 618
+M+
Sbjct: 584 KMKE 587
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 150/319 (47%), Gaps = 39/319 (12%)
Query: 24 ICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSA 83
+ ARK+FDE+P+R+ + N MI +Y + G Y + + +FG+M N +PD +++ L A
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 84 CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
C+ G IH G S+L V N L+ MYGKC +AR V DEM+ + V+W
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEI------------------------------- 172
SL+ YA + F ALEV R M E V+I
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREM-ESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFK 268
Query: 173 -------AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYG 225
+WN MI + + + L+ M ++PD + ++++ AC ++ + G
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
Query: 226 CMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKL 285
+HG++ + + ++N+++ YAK C A ++F + + + VSW A+I A+
Sbjct: 329 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 286 GDTQKAFLAFQQAPDKNIV 304
G A F + D +V
Sbjct: 389 GRGCDAVALFSKLQDSGLV 407
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 4/188 (2%)
Query: 16 VSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSF 75
VS + + + + +F +M + V+WN MI Y + +++ L+ M +PD+
Sbjct: 251 VSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
S ++ L AC S G IH + +L + N+LIDMY KC AR VF+ M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACL 191
+ V+W +++ AY S A+ +F + + IA+ T +A + G +E
Sbjct: 371 KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Query: 192 GLFKEMCE 199
FK M +
Sbjct: 431 SCFKLMTD 438
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 327 LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC 386
L++ + S Q + G VL + L + VHS II L +G L+ YA
Sbjct: 31 LELDQKSPQETVFLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASL 87
Query: 387 GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
D+ + F I E++++ N M+ ++ +G E + +F M V+PD TF +L
Sbjct: 88 KDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVL 147
Query: 447 MTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSG 506
CS G I G S +++ GLS + +V M G+ G+++EA+ + + S+
Sbjct: 148 KACSCSGTIVIGRKIHGS-ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV 206
Query: 507 ARTNSYEV 514
NS V
Sbjct: 207 VSWNSLVV 214
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 189/669 (28%), Positives = 313/669 (46%), Gaps = 64/669 (9%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-- 65
+FQ S+I AR+G + A +F +M +R V+W AMI+AY+ G ++ +F M
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 66 RISNS--------------------------KPDSFSYSAALSACAGGSHHGFGSVIHAL 99
R++ S + ++ SY+ ++ ++A
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMA 159
V +R S+ +N L+ Y + K ++A +VF MA V+ S++ Y A
Sbjct: 170 TPVK-FRDSV-ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 160 LEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM-CESLYQPDQWTFSALMNACTE 218
+F M ER I W MI G+ + G E GLF M E + + T + + AC +
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
G +HG V + + + NS++S Y+KL +A +F + VSWN++
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT------------------------ 314
I ++ +A+ F++ P K++VSWT MI G++
Sbjct: 348 ITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWT 407
Query: 315 -------RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
NG E AL F M + + ++ +VL A ASLA L G +H +++
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKM 467
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
+ L V NSLV+MY KCG+ + F I E ++VS+N+M+ + +G +A+ LF
Sbjct: 468 NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLF 527
Query: 428 REMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGR 487
+ +SG +P+ VTF +L C H+G +D G+ +F+SM S + + G DH ACMVD+LGR
Sbjct: 528 SMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGR 587
Query: 488 GGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYV 547
G + +A +L + + + LL A H + + L LEP+ YV
Sbjct: 588 SGLLDDASNLIS--TMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
Query: 548 MLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISN 607
+LS LY G+ ++ + + + +KK PGSSWI ++ V F++G+ S + +I
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGF 705
Query: 608 ILYFLEIEM 616
L + EM
Sbjct: 706 TLKMIRKEM 714
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 297/624 (47%), Gaps = 71/624 (11%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F + + A+ +I AR+LFDE+P D+V++N +I+ Y+ ++ LF MR
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ D F+ S ++AC +H V G+ S V N+ + Y K
Sbjct: 134 LGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK------ 185
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPE-RVEIAWNTMIAGHARRGE 186
L A+ VF M E R E++WN+MI + + E
Sbjct: 186 -------------------------GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE 220
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
L L+KEM ++ D +T ++++NA T ++ G HG +IK+G+ V +
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 247 ILSFYAKLECPS-DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
++ FY+K C D M D++K F Q+ ++V
Sbjct: 281 LIDFYSK--CGGCDGMY------------------------DSEKVF---QEILSPDLVV 311
Query: 306 WTSMIVGYTRNGN-GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
W +MI GY+ N E A+ F M R + D+ V AC++L+ + K +H
Sbjct: 312 WNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 365 IRRGL-DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
I+ + + V N+L+++Y K G+L+ + F + E + VS+N M+ + HG EA
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVD 483
+ L++ M+ SG+ P+++TF +L C+H G +DEG +F +M F + +H +CM+D
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMID 491
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKE 543
+LGR G + EA+ G + ++ LLGAC H ++ L ++P
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPG--SVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 544 VGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMA 603
YVML+N+Y + +W+E VRK M + ++K PG SWIE++ FV+ + S P +
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 604 DISNILYFLEIEMRHTRPINFDID 627
+++ +LE M+ + + + +D
Sbjct: 610 EVNE---YLEEMMKKMKKVGYVMD 630
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 182/365 (49%), Gaps = 38/365 (10%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G +HAL V S SS ++N +++Y KC + AR F + N ++ ++ AYA
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
S +A ++F +P+ +++NT+I+G+A E A + LFK M + ++ D +T S L
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF-N 271
+ AC + D++ +H F + G+ S V N+ +++Y+K +A+ +F +
Sbjct: 147 IAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRD 204
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR 331
+VSWN SMIV Y ++ G AL+++ +M
Sbjct: 205 EVSWN-------------------------------SMIVAYGQHKEGAKALALYKEMIF 233
Query: 332 NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEG 391
++D +VL+A SL L G+ H +I+ G + VG+ L++ Y+KCG +G
Sbjct: 234 KGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 392 ---SALAFCGILEKDLVSWNSMLFAFGLHGR-ANEAMCLFREMVASGVKPDEVTFTGMLM 447
S F IL DLV WN+M+ + ++ + EA+ FR+M G +PD+ +F +
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTS 353
Query: 448 TCSHL 452
CS+L
Sbjct: 354 ACSNL 358
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 3/255 (1%)
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
TF L+ RD+ G +H +KS +S+ + N ++ Y+K S A F S
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
N S+N I+ A+ K A F + P + VS+ ++I GY A+ +F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
M + ++D ++ AC L K +H + G D Y V N+ V Y+K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 388 DLEGSALAFCGILE-KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
L + F G+ E +D VSWNSM+ A+G H +A+ L++EM+ G K D T +L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 447 MTCSHLGLIDEGFAF 461
+ L + G F
Sbjct: 248 NALTSLDHLIGGRQF 262
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/621 (27%), Positives = 288/621 (46%), Gaps = 78/621 (12%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQ-QSLSLF 62
+ S L S I +RSG AR++FDEM +D ++WN++++ S G + +++ +F
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
M + D S+++ ++ C + IH L + GY S L V N L+ Y KC
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKC 324
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
+ VF M ER ++W TMI+ +
Sbjct: 325 -------------------------------GVLEAVKSVFHQMSERNVVSWTTMISSNK 353
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
+ + +F M P++ TF L+NA + + G +HG IK+G+ S
Sbjct: 354 -----DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS 408
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
V NS ++ YAK E DA + AF+ +
Sbjct: 409 VGNSFITLYAKFEALEDAKK-------------------------------AFEDITFRE 437
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILA--HGKMV 360
I+SW +MI G+ +NG AL MFL ++ + G+VL+A A ++ G+
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
H+ +++ GL+ V ++L++MYAK G+++ S F + +K+ W S++ A+ HG
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDF 556
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
M LF +M+ V PD VTF +L C+ G++D+G+ F M + L +H +C
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC 616
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEP 540
MVDMLGR G + EA+ L + G + + +LG+C HG++ G+ V E ++P
Sbjct: 617 MVDMLGRAGRLKEAEELMSEVP--GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKP 674
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRN-----VVTAFVSG 595
E YV + N+Y +W +A +RK M + V K G SWI++ + + F SG
Sbjct: 675 ELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSG 734
Query: 596 NNSSPYMADISNILYFLEIEM 616
+ S P +I ++ + +EM
Sbjct: 735 DKSHPKSDEIYRMVEIIGLEM 755
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 193/460 (41%), Gaps = 85/460 (18%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDRD-SVAWNAMITAYSHLGLYQQSLSLFG 63
+S+LFQ RI H KLFD R+ + + N I+ ++LS+F
Sbjct: 13 KSFLFQ------RFYSPYRIAH--KLFDGSSQRNATTSINHSISESLRRNSPARALSIFK 64
Query: 64 ---SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYG 120
+ D + AL AC G G IH SG+ S + V+N+++ MY
Sbjct: 65 ENLQLGYFGRHMDEVTLCLALKACRGDLKRG--CQIHGFSTTSGFTSFVCVSNAVMGMYR 122
Query: 121 KCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAG 180
K + +A +F+ + D + V+ WNT+++G
Sbjct: 123 KAGRFDNALCIFENLVDPDVVS-------------------------------WNTILSG 151
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
+ + L M + D +T+S ++ C S L G + V+K+G S
Sbjct: 152 F---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESD 208
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD 300
+ V NS ++ Y++ G + A F +
Sbjct: 209 LVVGNSFITMYSRS-------------------------------GSFRGARRVFDEMSF 237
Query: 301 KNIVSWTSMIVGYTRNGN-GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
K+++SW S++ G ++ G G A+ +F DM R ++LD++ +V+ C L +
Sbjct: 238 KDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ 297
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGR 419
+H I+RG + L VGN L++ Y+KCG LE F + E+++VSW +M +
Sbjct: 298 IHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTM-----ISSN 352
Query: 420 ANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGF 459
++A+ +F M GV P+EVTF G++ I EG
Sbjct: 353 KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGL 392
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/567 (28%), Positives = 274/567 (48%), Gaps = 65/567 (11%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G + HARKLFD + RD V+W AMI+ +S G + +L LF M + K + F+Y +
Sbjct: 59 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
L +C G IH V +L V ++L+ +Y +C K +AR FD
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD------ 172
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
SM ER ++WN MI G+ + LF+ M
Sbjct: 173 -------------------------SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLT 207
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
+PD +TF +L+ A + + +HG IK G+ + + S+
Sbjct: 208 EGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSL------------ 255
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN- 318
++A++K G A+ + ++++S T++I G+++ N
Sbjct: 256 -------------------VNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY-LFVGN 377
A +F DM R ++D +V ++L C ++A + G+ +H ++ ++ + +GN
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
SL++MYAK G++E + LAF + EKD+ SW S++ +G HG +A+ L+ M +KP
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
++VTF +L CSH G + G+ + +M ++ G+ +H++C++DML R GY+ EA +L
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476
Query: 498 AKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASG 557
+ ++++ L AC HG++ L ++EP K V Y+ L+++Y A+G
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANG 536
Query: 558 QWKEAEIVRKEMLDQG-VKKVPGSSWI 583
W A RK M + G K PG S +
Sbjct: 537 AWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 181/413 (43%), Gaps = 69/413 (16%)
Query: 13 SKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
S ++SL AR G++ AR FD M +RD V+WNAMI Y+ S SLF M K
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD F++ + L A S +H L + G+ S + SL++ Y KC +A K+
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA-C 190
+ +R ++ +I G +++ +
Sbjct: 272 HE-------------------------------GTKKRDLLSCTALITGFSQQNNCTSDA 300
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
+FK+M + D+ S+++ CT + G +HGF +KS +++
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSS-----QIR------ 349
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
F+ N++ID + K G+ + A LAF++ +K++ SWTS+I
Sbjct: 350 -------------------FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLI 390
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-KMVHSCIIRRGL 369
GY R+GN E A+ ++ M I+ +++ ++L AC+ G K+ + I + G+
Sbjct: 391 AGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFC----GILEKDLVSWNSMLFAFGLHG 418
+ + +++M A+ G LE A A GI+ +W + L A HG
Sbjct: 451 EAREEHLSCIIDMLARSGYLE-EAYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 98/171 (57%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
+ +ID ++K GD + A F + +++VSWT+MI ++R G AL +F +M R ++
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+ G+VL +C L L G +H + + L V ++L+++YA+CG +E + L
Sbjct: 111 ANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
F + E+DLVSWN+M+ + + A+ + LF+ M+ G KPD TF +L
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 221
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 60/114 (52%)
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL 404
L C+ + ++H I G L + + L+++Y K GD++ + F I ++D+
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
VSW +M+ F G +A+ LF+EM VK ++ T+ +L +C LG + EG
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEG 132
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+SG I A F+EM ++D +W ++I Y G +++++ L+ M KP+ ++
Sbjct: 363 AKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFL 422
Query: 79 AALSACAGGSHHGFGSVIH-ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF---DE 134
+ LSAC+ G I+ ++ G + + +IDM + +A + +
Sbjct: 423 SLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEG 482
Query: 135 MADSNEVTWCSLLFA---YANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
+ + TW + L A + N L +A SM R + + + + +A G + L
Sbjct: 483 IVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNAL 542
Query: 192 GLFKEMCES 200
K M ES
Sbjct: 543 NTRKLMKES 551
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 255/527 (48%), Gaps = 77/527 (14%)
Query: 115 LIDMYGKCLKPHD---ARKVFDEMADSNEVTWCSLLFAYA-NSSLFGMALEVFRSMPERV 170
L + +C++ D A +VF M N +TW SLL + + S A ++F +PE
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPD 123
Query: 171 EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHG 230
++N M++ + R E F M
Sbjct: 124 TFSYNIMLSCYVRNVNFEKAQSFFDRM--------------------------------P 151
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQK 290
F + W N++++ YA+ A E+F S N+VSWNA+I +++ GD +K
Sbjct: 152 FKDAASW-------NTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEK 204
Query: 291 AFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT--RNSIQLDNLVAGAV---- 344
A F+ AP + +V+WT+MI GY + ELA +MF DMT +N + + +++G V
Sbjct: 205 ASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Query: 345 --------------------------LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
L C+ L+ L G+ +H + + L + S
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L++MY KCG+L + F + +KD+V+WN+M+ + HG A++A+CLFREM+ + ++PD
Sbjct: 325 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
+TF +L+ C+H GL++ G A+F SM ++ + DH CMVD+LGR G + EA L
Sbjct: 385 WITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLI 444
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
+ A + LLGAC H ++ E L L + GYV L+N+Y + +
Sbjct: 445 RSMPFRPHAAV--FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNR 502
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
W++ VRK M + V KVPG SWIEIRN V F S + P + I
Sbjct: 503 WEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSI 549
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 151/372 (40%), Gaps = 55/372 (14%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSH-LGLYQQSLSL 61
S + +F I RSG I A ++F M ++++ WN+++ S ++ L
Sbjct: 56 SDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQL 115
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA-----NSLI 116
F + +PD+FSY+ LS + + +P N++I
Sbjct: 116 FDEI----PEPDTFSYNIMLSCYVRNVN---------FEKAQSFFDRMPFKDAASWNTMI 162
Query: 117 DMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNT 176
Y + + AR++F M + NEV+W +++ Y A F+ P R +AW
Sbjct: 163 TGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTA 222
Query: 177 MIAGHARRGEVEAC--------------------------------LGLFKEMCESLYQP 204
MI G+ + +VE L LF+ M E +P
Sbjct: 223 MITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRP 282
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
+ S+ + C+E + G +H V KS + + S++S Y K DA ++F
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVGYTRNGNGE 320
+ V+WNA+I + + G+ KA F++ D I +++ ++++ G
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 321 LALSMFLDMTRN 332
+ ++ F M R+
Sbjct: 403 IGMAYFESMVRD 414
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 265/563 (47%), Gaps = 63/563 (11%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+AR +F+ + WN+MI YS+ ++L + M PD F++ L AC+
Sbjct: 59 YARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS 118
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G FGS +H VV +G+ ++ V+ L+ MY C EV +
Sbjct: 119 GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCC----------------GEVNY-- 160
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L VF +P+ +AW ++I+G + F+EM + + +
Sbjct: 161 -------------GLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+ L+ AC +D++ G HGF+ G+ F
Sbjct: 208 ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP-----------------------YFQ 244
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
S FN + ++ID + K GD + A F P++ +VSW S+I GY++NG+ E AL M
Sbjct: 245 SKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCM 304
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
FLDM I D + +V+ A G+ +H+ + + G K + +LVNMYAK
Sbjct: 305 FLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAK 364
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG-VKPDEVTFTG 444
GD E + AF + +KD ++W ++ HG NEA+ +F+ M G PD +T+ G
Sbjct: 365 TGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+L CSH+GL++EG +F M GL ++H CMVD+L R G EA+ L K +
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK--TMP 482
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG---YVMLSNLYCASGQWKE 561
N + LL C H +L + + EPE E+G YV+LSN+Y +G+W +
Sbjct: 483 VKPNVNIWGALLNGCDIHENLELTDRIRSMVA--EPE-ELGSGIYVLLSNIYAKAGRWAD 539
Query: 562 AEIVRKEMLDQGVKKVPGSSWIE 584
+++R+ M + V KV G S +E
Sbjct: 540 VKLIRESMKSKRVDKVLGHSSVE 562
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS I A+ G + AR LFD MP+R V+WN++IT YS G +++L +F M
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD ++ + + A G IHA V +G+ + +L++MY K A+K
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC- 190
F+++ + + W ++ A+ AL +F+ M E+ N G G + AC
Sbjct: 375 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEK----GNATPDGITYLGVLYACS 430
Query: 191 -LGLFKE 196
+GL +E
Sbjct: 431 HIGLVEE 437
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 162/589 (27%), Positives = 281/589 (47%), Gaps = 101/589 (17%)
Query: 19 ARSGRICHARKLFDEMP-DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSY 77
A+ RI A LF+ M ++++V W +M+T YS G +++ F +R ++ + +++
Sbjct: 171 AQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTF 230
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ L+ACA S G +H +V SG+++++ V ++LIDMY KC + AR + + M +
Sbjct: 231 PSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGM-E 289
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
++V ++WN+MI G R+G + L +F M
Sbjct: 290 VDDV------------------------------VSWNSMIVGCVRQGLIGEALSMFGRM 319
Query: 198 CESLYQPDQWTFSALMNACTESR-DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
E + D +T +++N SR +M H ++K+G+++ V N+++ YAK
Sbjct: 320 HERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAK--- 376
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
I+D+ +K+ F+ +K+++SWT+++ G T N
Sbjct: 377 -------------------RGIMDSALKV---------FEGMIEKDVISWTALVTGNTHN 408
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G+ + AL +F +M I D +V +VL A A L +L G+ VH I+ G L V
Sbjct: 409 GSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVN 468
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK 436
NSLV MY KCG LE + + F + +DL++W ++ + +
Sbjct: 469 NSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKN------------------- 509
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQS 496
GL+++ +F SM + +G++ G +H ACM+D+ GR G + +
Sbjct: 510 ----------------GLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQ 553
Query: 497 LAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCAS 556
L + A ++ +L A HG++ G + L LEP V YV LSN+Y A+
Sbjct: 554 LLHQMEVEPDATV--WKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAA 611
Query: 557 GQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
G+ EA VR+ M + + K PG SW+E + V +F+S + P M +I
Sbjct: 612 GRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEI 660
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 210/474 (44%), Gaps = 95/474 (20%)
Query: 18 LARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS------- 70
L++SGR+ AR++FD+MP+RD WN MI AYS+ + LF S + N+
Sbjct: 38 LSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALI 97
Query: 71 ------------------------KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYR 106
KP+ ++ + L C G IH + +G+
Sbjct: 98 SGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFD 157
Query: 107 SSLPVANSLIDMYGKCLKPHDARKVFDEM-ADSNEVTWCSLLFAYANSSLFGMALEVFRS 165
+ V N L+ MY +C + +A +F+ M + N VTW S+L Y+ + A+E FR
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 166 MPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYG 225
+ R G Q +Q+TF +++ AC G
Sbjct: 218 L---------------RREGN----------------QSNQYTFPSVLTACASVSACRVG 246
Query: 226 CMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKL 285
VH ++KSG+ + + V+++++ YAK EM
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCR------EM---------------------- 278
Query: 286 GDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVL 345
++ +A L + D +VSW SMIVG R G ALSMF M +++D+ ++L
Sbjct: 279 -ESARALLEGMEVDD--VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Query: 346 HACA-SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL 404
+ A S + H I++ G Y V N+LV+MYAK G ++ + F G++EKD+
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDV 395
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+SW +++ +G +EA+ LF M G+ PD++ +L + L L++ G
Sbjct: 396 ISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFG 449
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 179/356 (50%), Gaps = 37/356 (10%)
Query: 92 FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYA 151
FGS IH+ + S+L L+ K + +AR++FD+M + +E TW +++ AY+
Sbjct: 16 FGSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70
Query: 152 NSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSA 211
NS A ++FRS P + I+WN +I+G+ + G LF EM +P+++T +
Sbjct: 71 NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130
Query: 212 LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF-GAF 270
++ CT +L G +HG IK+G+ + V N +L+ YA+ + S+A +F + G
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190
Query: 271 NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT 330
N V+W TSM+ GY++NG A+ F D+
Sbjct: 191 NNVTW-------------------------------TSMLTGYSQNGFAFKAIECFRDLR 219
Query: 331 RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
R Q + +VL ACAS++ G VH CI++ G ++V ++L++MYAKC ++E
Sbjct: 220 REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREME 279
Query: 391 GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
+ G+ D+VSWNSM+ G EA+ +F M +K D+ T +L
Sbjct: 280 SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 35/292 (11%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGS 64
++ ++ ++ I A+ + AR L + M D V+WN+MI GL ++LS+FG
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 65 MRISNSKPDSFSYSAALSACA-GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
M + K D F+ + L+ A + S H L+V +GY + V N+L+DMY K
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG 378
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
A KVF+ M + + ++W +L + G+
Sbjct: 379 IMDSALKVFEGMIEKDVISWTAL-------------------------------VTGNTH 407
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G + L LF M PD+ +++++A E + +G VHG IKSG+ S++ V
Sbjct: 408 NGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSV 467
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG---DTQKAF 292
NS+++ Y K DA +FNS + ++W +I + K G D Q+ F
Sbjct: 468 NNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYF 519
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 164/592 (27%), Positives = 285/592 (48%), Gaps = 69/592 (11%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A+ LFD+M RD V+WN MI+ Y+ +G + L L MR +PD ++ A+LS
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
G ++H +V +G+ + + +LI MY KC K + +V +
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE------------- 304
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
++P + + W MI+G R G E L +F EM +S
Sbjct: 305 ------------------TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
++++ +C + G VHG+V++ G++ NS+++ YAK
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKC------------ 394
Query: 267 FGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF 326
G K+ + F++ ++++VSW ++I GY +N + AL +F
Sbjct: 395 -------------------GHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 327 LDMTRNSIQ-LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
+M ++Q +D+ ++L AC+S L GK++H +IR + V +LV+MY+K
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSK 495
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
CG LE + F I KD+VSW ++ +G HG+ + A+ ++ E + SG++P+ V F +
Sbjct: 496 CGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAV 555
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK-YSKT 504
L +CSH G++ +G F SM +FG+ +H+AC+VD+L R + +A K+ +++
Sbjct: 556 LSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRP 615
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
S + ++L AC A+G + E + L+P YV L + + A +W +
Sbjct: 616 S---IDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSE 672
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEM 616
+M G+KK+PG S IE+ T F N + + D ++L L EM
Sbjct: 673 SWNQMRSLGLKKLPGWSKIEMNGKTTTFFM--NHTSHSDDTVSLLKLLSREM 722
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 239/548 (43%), Gaps = 75/548 (13%)
Query: 9 FQTTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
F +S +V+L A+ G + HARK+F+EM +RD V W AMI YS G+ ++ SL MR
Sbjct: 81 FYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRF 140
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
KP + LS + +H V+ G+ + V NS++++Y KC D
Sbjct: 141 QGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD 197
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A+ +FD+ M +R ++WNTMI+G+A G +
Sbjct: 198 AKDLFDQ-------------------------------MEQRDMVSWNTMISGYASVGNM 226
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
L L M +PDQ TF A ++ D+ G M+H ++K+G+ M +K ++
Sbjct: 227 SEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTAL 286
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
++ Y K + + + + V W +I M+LG +KA + F +
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSE---------- 336
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
M ++ L + +V+ +CA L G VH ++R
Sbjct: 337 ---------------------MLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
G NSL+ MYAKCG L+ S + F + E+DLVSWN+++ + + +A+ LF
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 428 REMVASGVKP-DEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
EM V+ D T +L CS G + G + F + A +VDM
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTA-LVDMYS 494
Query: 487 RGGYVAEAQSLAKKYSKTSGARTNSYEVLLG--ACHAHGDLGTGSSVGEYLKT-LEPEKE 543
+ GY+ AQ + + S S+ +L+ H GD+ E+L + +EP
Sbjct: 495 KCGYLEAAQ---RCFDSISWKDVVSWGILIAGYGFHGKGDIAL-EIYSEFLHSGMEPNHV 550
Query: 544 VGYVMLSN 551
+ +LS+
Sbjct: 551 IFLAVLSS 558
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 181/417 (43%), Gaps = 65/417 (15%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N+ I S G ++Q LS F SM + PD+F++ + L ACA FG IH V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
V+G+ S +++SL+++Y K ARKVF+EM + + V W +++ Y+ + + G
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG---- 129
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
EAC L EM +P T +++ E
Sbjct: 130 --------------------------EAC-SLVNEMRFQGIKPGPVTLLEMLSGVLEITQ 162
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
+ C+ H F + G+ + V NS+L+ Y K + DA ++F+ + VSWN
Sbjct: 163 L--QCL-HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWN----- 214
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
+MI GY GN L + M + ++ D
Sbjct: 215 --------------------------TMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE 401
GA L ++ L G+M+H I++ G D + + +L+ MY KCG E S I
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
KD+V W M+ GRA +A+ +F EM+ SG ++ +C+ LG D G
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN-SK 71
S I A+ G + + +F+ M +RD V+WNA+I+ Y+ ++L LF M+ +
Sbjct: 386 SLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQ 445
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
DSF+ + L AC+ G +IH +V+ S R V +L+DMY KC A++
Sbjct: 446 VDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC 505
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVF----RSMPERVEIAWNTMIAGHARRGEV 187
FD ++ + V+W L+ Y +ALE++ S E + + +++ + G V
Sbjct: 506 FDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMV 565
Query: 188 EACLGLFKEM 197
+ L +F M
Sbjct: 566 QQGLKIFSSM 575
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
+ S I + +G+ + LS F M N + D ++L ACASL L+ G +H ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
G ++ +SLVN+YAK G L + F + E+D+V W +M+ + G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 426 LFREMVASGVKPDEVTFTGML---MTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
L EM G+KP VT ML + + L + + FA + + + M ++ C
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHD-FAVIYGFDCDIAVMNSMLNLYCKC 192
Query: 483 DMLG 486
D +G
Sbjct: 193 DHVG 196
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 176/623 (28%), Positives = 297/623 (47%), Gaps = 78/623 (12%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRD-SVAWNAMITAYSHLGLYQQSLS 60
H++ + + T +V A + I +ARKLFD+ P RD S N+MI AY Y S +
Sbjct: 4 HAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFA 63
Query: 61 LFGSMRISNS-KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMY 119
L+ +R PD+F+++ +C+ G +H+ + G+ + + V+ ++DMY
Sbjct: 64 LYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMY 123
Query: 120 GKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIA 179
K K AR FDEM P R E++W +I+
Sbjct: 124 AKFGKMGCARNAFDEM-------------------------------PHRSEVSWTALIS 152
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSS 239
G+ R GE++ LF +M + D ++A+M+ +S DM
Sbjct: 153 GYIRCGELDLASKLFDQM---PHVKDVVIYNAMMDGFVKSGDM----------------- 192
Query: 240 AMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
+ A +F+ ++W +I + + D A F P
Sbjct: 193 ------------------TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMP 234
Query: 300 DKNIVSWTSMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHGK 358
++N+VSW +MI GY +N + + +F +M S+ D++ +VL A + L+ G+
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 359 MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
H + R+ LDK + V ++++MY+KCG++E + F + EK + SWN+M+ + L+G
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV 478
A A+ LF M+ KPDE+T ++ C+H GL++EG +F M E GL+ ++H
Sbjct: 355 NARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHY 412
Query: 479 ACMVDMLGRGGYVAEAQSLAKKYS-KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKT 537
CMVD+LGR G + EA+ L + +G +S+ L AC + D+ + +
Sbjct: 413 GCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSF---LSACGQYKDIERAERILKKAVE 469
Query: 538 LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNN 597
LEP+ + YV+L NLY A +W + +V+ M KK G S IEI +V+ F+SG+
Sbjct: 470 LEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDT 529
Query: 598 SSPYMADISNILYFLEIEMRHTR 620
+ P+ I +L L + M +
Sbjct: 530 THPHRRSIHLVLGDLLMHMNEEK 552
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/454 (31%), Positives = 240/454 (52%), Gaps = 3/454 (0%)
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
++L G A +F + +N +I + E G + +M +S PD TF L
Sbjct: 64 TNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFL 123
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
+ A +E +L G H +++ G+ + + V+NS++ YA + A +F G +
Sbjct: 124 IKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDV 183
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
VSW +++ + K G + A F + P +N+ +W+ MI GY +N E A+ +F M R
Sbjct: 184 VSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE 243
Query: 333 SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGS 392
+ + V +V+ +CA L L G+ + +++ + L +G +LV+M+ +CGD+E +
Sbjct: 244 GVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKA 303
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
F G+ E D +SW+S++ +HG A++AM F +M++ G P +VTFT +L CSH
Sbjct: 304 IHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHG 363
Query: 453 GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSY 512
GL+++G + +M + G+ ++H C+VDMLGR G +AEA++ K A
Sbjct: 364 GLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI--L 421
Query: 513 EVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQ 572
LLGAC + + VG L ++PE YV+LSN+Y +GQW + E +R M ++
Sbjct: 422 GALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEK 481
Query: 573 GVKKVPGSSWIEIRNVVTAFVSGNNSS-PYMADI 605
VKK PG S IEI + F G++ P M I
Sbjct: 482 LVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 157/365 (43%), Gaps = 32/365 (8%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+A +F ++ + + +N +I +S ++ + M S PD+ ++ + A +
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G H+ +V G+++ + V NSL+ MY C A ++F +M + V+W S
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
++ Y + A E+F MP R W+ MI G+A+ E + LF+ M +
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+ +++++C + +G + +V+KS +
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMT--------------------------- 281
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
N + A++D + GD +KA F+ P+ + +SW+S+I G +G+ A+
Sbjct: 282 ----VNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHY 337
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR-RGLDKYLFVGNSLVNMYA 384
F M ++ AVL AC+ ++ G ++ + + G++ L +V+M
Sbjct: 338 FSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLG 397
Query: 385 KCGDL 389
+ G L
Sbjct: 398 RAGKL 402
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 55/267 (20%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS + + G + +AR++FDEMP R+ W+ MI Y+ +++++ LF M+
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
+ + +S+CA FG + VV S +L + +L+DM+ +C A V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F+ + +++ ++W S++ A + GHA + +
Sbjct: 307 FEGLPETDSLSWSSIIKGLA--------------------------VHGHAHKA-----M 335
Query: 192 GLFKEMCESLYQPDQWTFSALMNACT---------------------ESRDMLYGCMVHG 230
F +M + P TF+A+++AC+ E R YGC+V
Sbjct: 336 HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIV-D 394
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECP 257
+ ++G E +N IL + K P
Sbjct: 395 MLGRAG--KLAEAENFILKMHVKPNAP 419
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/569 (29%), Positives = 269/569 (47%), Gaps = 69/569 (12%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G I A K+F+++ R+ V W +MI Y L ++ L LF MR +N + ++Y
Sbjct: 187 AKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYG 246
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ AC S G H +V SG S + SL+DMY KC +AR+VF+E +
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ V W + MI G+ G V L LF++M
Sbjct: 307 DLVMWTA-------------------------------MIVGYTHNGSVNEALSLFQKMK 335
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNSILSFYAKLECP 257
+P+ T +++++ C ++ G VHG IK G W + V N+++ YAK
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT--NVANALVHMYAKCYQN 393
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
DA F+ +K+IV+W S+I G+++NG
Sbjct: 394 RDAK-------------------------------YVFEMESEKDIVAWNSIISGFSQNG 422
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL--DKYLFV 375
+ AL +F M S+ + + ++ ACASL LA G +H+ ++ G + V
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
G +L++ YAKCGD + + L F I EK+ ++W++M+ +G G ++ LF EM+
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
KP+E TFT +L C H G+++EG +F SM ++ + H CMVDML R G + +A
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCA 555
+ +K R + L C H G V + + L P+ YV++SNLY +
Sbjct: 603 DIIEKMPIQPDVRC--FGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 556 SGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
G+W +A+ VR M +G+ K+ G S +E
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 227/537 (42%), Gaps = 76/537 (14%)
Query: 13 SKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
+K+VSL G AR +FD++P+ D W M+ Y + + L+ + +
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHA-LVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
D +S AL AC G IH LV V + + V L+DMY KC + A K
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV--VLTGLLDMYAKCGEIKSAHK 197
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
VF+++ N V W S MIAG+ + E
Sbjct: 198 VFNDITLRNVVCWTS-------------------------------MIAGYVKNDLCEEG 226
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
L LF M E+ +++T+ L+ ACT+ + G HG ++KSG + + S+L
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
Y K S+A +FN + V W A MI
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTA-------------------------------MI 315
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL- 369
VGYT NG+ ALS+F M I+ + + +VL C + L G+ VH I+ G+
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW 375
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFRE 429
D V N+LV+MYAKC + F EKD+V+WNS++ F +G +EA+ LF
Sbjct: 376 DTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 433
Query: 430 MVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFG-LSHGMDHV-ACMVDMLGR 487
M + V P+ VT + C+ LG + G + + S + G L+ HV ++D +
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVG-SSLHAYSVKLGFLASSSVHVGTALLDFYAK 492
Query: 488 GGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGD-LGTGSSVGEYLKTLEPEKE 543
G + QS + T ++ ++G GD +G+ E LK + E
Sbjct: 493 CG---DPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNE 546
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 197/444 (44%), Gaps = 85/444 (19%)
Query: 11 TTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
TS + + G I +AR++F+E D V W AMI Y+H G ++LSLF M+
Sbjct: 280 VTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEI 339
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
KP+ + ++ LS C + G +H L + G + VAN+L+ MY KC + DA+
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT-NVANALVHMYAKCYQNRDAKY 398
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
VF+ ++ + V W N++I+G ++ G +
Sbjct: 399 VFEMESEKDIVAW-------------------------------NSIISGFSQNGSIHEA 427
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW--SSAMEVKNSIL 248
L LF M P+ T ++L +AC + G +H + +K G+ SS++ V ++L
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
FYAK P A +F++ N ++W+A+I + K GDT
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDT-------------------- 527
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
+G +L +F +M + + + ++L AC ++ GK S + +
Sbjct: 528 --IG---------SLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYK-- 574
Query: 369 LDKYLFVGNS-----LVNMYAKCGDLEGSALAFCGILEK-----DLVSWNSMLFAFGLHG 418
Y F ++ +V+M A+ G+LE + I+EK D+ + + L G+H
Sbjct: 575 --DYNFTPSTKHYTCMVDMLARAGELEQAL----DIIEKMPIQPDVRCFGAFLHGCGMHS 628
Query: 419 RANEAMCLFREMVASGVKPDEVTF 442
R + + ++M+ + PD+ ++
Sbjct: 629 RFDLGEIVIKKML--DLHPDDASY 650
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 153/360 (42%), Gaps = 66/360 (18%)
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
H ++ +G + +A L+ +YG DAR VFD++
Sbjct: 64 HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQI--------------------- 102
Query: 157 GMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNAC 216
PE W M+ + E + L+ + + ++ D FS + AC
Sbjct: 103 ----------PEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKAC 152
Query: 217 TESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWN 276
TE +D+ G +H ++K PS F+ V
Sbjct: 153 TELQDLDNGKKIHCQLVK---------------------VPS-----------FDNVVLT 180
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
++D + K G+ + A F +N+V WTSMI GY +N E L +F M N++
Sbjct: 181 GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG 240
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
+ G ++ AC L+ L GK H C+++ G++ + SL++MY KCGD+ + F
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
DLV W +M+ + +G NEA+ LF++M +KP+ VT +L C GLI+
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIE 357
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/474 (31%), Positives = 241/474 (50%), Gaps = 3/474 (0%)
Query: 135 MADSNEVT-WCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL 193
M DS +T + S + +S A VF WN MI G + E E L L
Sbjct: 43 MQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLL 102
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
++ M S + +TF +L+ AC+ +H + K G+ + + NS+++ YA
Sbjct: 103 YQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAV 162
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY 313
A +F+ + VSWN++I ++K G A F++ +KN +SWT+MI GY
Sbjct: 163 TGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGY 222
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
+ + AL +F +M + ++ DN+ L ACA L L GK +HS + + +
Sbjct: 223 VQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDS 282
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
+G L++MYAKCG++E + F I +K + +W +++ + HG EA+ F EM
Sbjct: 283 VLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKM 342
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
G+KP+ +TFT +L CS+ GL++EG F SM ++ L ++H C+VD+LGR G + E
Sbjct: 343 GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
A+ ++ A + LL AC H ++ G +GE L ++P YV +N++
Sbjct: 403 AKRFIQEMPLKPNAVI--WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIH 460
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISN 607
+W +A R+ M +QGV KVPG S I + F++G+ S P + I +
Sbjct: 461 AMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQS 514
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 194/404 (48%), Gaps = 33/404 (8%)
Query: 16 VSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSF 75
+S S + +A+ +FD D+ WN MI +S ++SL L+ M S++ +++
Sbjct: 57 ISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAY 116
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
++ + L AC+ S + IHA + GY + + NSLI+ Y A +FD +
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
+ ++V+W S++ Y + +AL +FR M E+ I+W TMI+G+ + + L LF
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
EM S +PD + + ++AC + + G +H ++ K+
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT-------------------- 276
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
+ M + G +ID + K G+ ++A F+ K++ +WT++I GY
Sbjct: 277 ----RIRMDSVLGC-------VLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLF 374
+G+G A+S F++M + I+ + + AVL AC+ ++ GK++ + R L +
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLH 417
+V++ + G L+ + + L+ + V W ++L A +H
Sbjct: 386 HYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 31/205 (15%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP 72
S I ++G++ A LF +M ++++++W MI+ Y + +++L LF M+ S+ +P
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
D+ S + ALSACA G IH+ + + R + LIDMY KC
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC---------- 295
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
EM ++ EV F+++ ++ AW +I+G+A G +
Sbjct: 296 GEMEEALEV---------------------FKNIKKKSVQAWTALISGYAYHGHGREAIS 334
Query: 193 LFKEMCESLYQPDQWTFSALMNACT 217
F EM + +P+ TF+A++ AC+
Sbjct: 335 KFMEMQKMGIKPNVITFTAVLTACS 359
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 260/471 (55%), Gaps = 11/471 (2%)
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE-VEACLGLFKEMCESLYQPD 205
L + +S L A +VF +PE I+ +I + VEA + +C + +P+
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGI-RPN 92
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
++TF ++ + T SRD+ G +H + +K G +S + V +++L+ Y KL +DA F+
Sbjct: 93 EFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFD 152
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
N VS +I ++K + ++A F+ P++++V+W ++I G+++ G E A++
Sbjct: 153 DTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNT 212
Query: 326 FLDMTRNSIQLDNLVA-GAVLHACASLAILAHGKMVHSCIIR-RGLDKYLFVGNSLVNMY 383
F+DM R + + N + A +++A GK +H+C I+ G +FV NSL++ Y
Sbjct: 213 FVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 384 AKCGDLEGSALAFCGILE--KDLVSWNSMLFAFGLHGRANEAMCLFREMVA-SGVKPDEV 440
+KCG++E S LAF + E +++VSWNSM++ + +GR EA+ +F +MV + ++P+ V
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNV 332
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH--GMDHVACMVDMLGRGGYVAEAQSLA 498
T G+L C+H GLI EG+ +F +++ + ++H ACMVDML R G EA+ L
Sbjct: 333 TILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELI 392
Query: 499 KKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
K G ++ LLG C H + + L+P YVMLSN Y A
Sbjct: 393 KSMPLDPG--IGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMEN 450
Query: 559 WKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
W+ ++R++M + G+K+ G SWIE+R+ + FV+ + ++ ++ +L
Sbjct: 451 WQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 165/354 (46%), Gaps = 34/354 (9%)
Query: 10 QTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN 69
+ ++V S I +A K+FDE+P+ D ++ A+I + + ++ F +
Sbjct: 29 NSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG 88
Query: 70 SKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
+P+ F++ + + G +H + G S++ V +++++ Y K DAR
Sbjct: 89 IRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR 148
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
+ FD+ D N V+ +L+ Y F AL +FR+MPER + WN +I G ++ G E
Sbjct: 149 RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE 208
Query: 190 CLGLFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
+ F +M E + P++ TF + A + G +H IK
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIK-------------- 254
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD--KNIVSW 306
F K FN F WN++I + K G+ + + LAF + + +NIVSW
Sbjct: 255 -FLGK---------RFNVF------VWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSW 298
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNS-IQLDNLVAGAVLHACASLAILAHGKM 359
SMI GY NG GE A++MF M +++ ++ +N+ VL AC ++ G M
Sbjct: 299 NSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYM 352
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 177/598 (29%), Positives = 292/598 (48%), Gaps = 80/598 (13%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ G + + ++F+++ +++V+W AMI++Y+ +++L F M S +P+ +
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 79 AALSACA-------GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
+ LS+C G S HGF +V L SL +A L+++Y +C K D V
Sbjct: 308 SVLSSCGLIGLIREGKSVHGF-AVRREL---DPNYESLSLA--LVELYAECGKLSDCETV 361
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
++D N V AWN++I+ +A RG V L
Sbjct: 362 LRVVSDRNIV-------------------------------AWNSLISLYAHRGMVIQAL 390
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
GLF++M +PD +T ++ ++AC + + G +HG VI++ S
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS------------- 437
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
++ N++ID + K G A F Q +++V+W SM+
Sbjct: 438 -------------------DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
G+++NGN A+S+F M + ++++ + AV+ AC+S+ L GK VH +I GL K
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-K 537
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
LF +L++MYAKCGDL + F + + +VSW+SM+ A+G+HGR A+ F +MV
Sbjct: 538 DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV 597
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
SG KP+EV F +L C H G ++EG +F M S FG+S +H AC +D+L R G +
Sbjct: 598 ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRSGDL 656
Query: 492 AEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSN 551
EA K+ + A + L+ C H + ++ L + + Y +LSN
Sbjct: 657 KEAYRTIKEMPFLADASV--WGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSN 714
Query: 552 LYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
+Y G+W+E +R M +KKVPG S IEI V F +G + +I L
Sbjct: 715 IYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFL 772
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 240/553 (43%), Gaps = 71/553 (12%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS + ++G + A K+FD MP RD VAW+ ++++ G ++L +F M +
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD+ + + + CA +H + + + NSL+ MY KC + ++
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F+++A N V+ W MI+ + R E L
Sbjct: 260 FEKIAKKNAVS-------------------------------WTAMISSYNRGEFSEKAL 288
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME-VKNSILSF 250
F EM +S +P+ T +++++C + G VHGF ++ E + +++
Sbjct: 289 RSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVEL 348
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
YA EC KL D + + D+NIV+W S+I
Sbjct: 349 YA--ECG--------------------------KLSDCETVL---RVVSDRNIVAWNSLI 377
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLD 370
Y G AL +F M I+ D + + AC + ++ GK +H +IR +
Sbjct: 378 SLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS 437
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
FV NSL++MY+K G ++ ++ F I + +V+WNSML F +G + EA+ LF M
Sbjct: 438 DE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
S ++ +EVTF ++ CS +G +++G + GL A ++DM + G
Sbjct: 497 YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS-GLKDLFTDTA-LIDMYAKCGD 554
Query: 491 VAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLS 550
+ A+++ + S S+ ++ A HG + GS++ + + +E + V+
Sbjct: 555 LNAAETV---FRAMSSRSIVSWSSMINAYGMHGRI--GSAISTFNQMVESGTKPNEVVFM 609
Query: 551 NLYCASGQWKEAE 563
N+ A G E
Sbjct: 610 NVLSACGHSGSVE 622
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F S I ++SG + A +F+++ R V WN+M+ +S G +++SLF M S
Sbjct: 440 FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHS 499
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ + ++ A + AC+ G +H +++SG + L +LIDMY KC + A
Sbjct: 500 YLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAA 558
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARR 184
VF M+ + V+W S++ AY G A+ F M E E+ + +++
Sbjct: 559 ETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHS 618
Query: 185 GEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM 222
G VE F M P+ F+ ++ + S D+
Sbjct: 619 GSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDL 656
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 270/593 (45%), Gaps = 63/593 (10%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S +F T+ + + + +A K+F+ MP+RD+ WNAM++ + G ++ SLF M
Sbjct: 85 SDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM 144
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R++ PDS + + + + +HA+ + G + VAN+ I YGKC
Sbjct: 145 RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDL 204
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
A+ VF+ + +R ++WN+M ++ G
Sbjct: 205 DSAKLVFEAI-----------------------------DRGDRTVVSWNSMFKAYSVFG 235
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
E GL+ M ++PD TF L +C + G ++H I G +E N
Sbjct: 236 EAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAIN 295
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
+ +S Y+K E DT A L F + VS
Sbjct: 296 TFISMYSKSE-------------------------------DTCSARLLFDIMTSRTCVS 324
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
WT MI GY G+ + AL++F M ++ + D + +++ C L GK + +
Sbjct: 325 WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 366 RRGLDK-YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
G + + + N+L++MY+KCG + + F EK +V+W +M+ + L+G EA+
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEAL 444
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
LF +M+ KP+ +TF +L C+H G +++G+ +F M + +S G+DH +CMVD+
Sbjct: 445 KLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDL 504
Query: 485 LGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEV 544
LGR G + EA L + S A + LL AC H ++ E L LEP+
Sbjct: 505 LGRKGKLEEALELIRNMSAKPDA--GIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAA 562
Query: 545 GYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNN 597
YV ++N+Y A+G W +R M + +KK PG S I++ +F G +
Sbjct: 563 PYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEH 615
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 190/462 (41%), Gaps = 70/462 (15%)
Query: 41 AWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALV 100
AWN I + +SL LF M+ +P++F++ ACA + G ++HA +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 101 VVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMAL 160
+ S + S + V + +DM+ KC A KVF+ M + + TW
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTW----------------- 121
Query: 161 EVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
N M++G + G + LF+EM + PD T L+ + + +
Sbjct: 122 --------------NAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK 167
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
+ +H I+ G + V N+ +S Y
Sbjct: 168 SLKLLEAMHAVGIRLGVDVQVTVANTWISTYG---------------------------- 199
Query: 281 AHMKLGDTQKAFLAFQQAP--DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
K GD A L F+ D+ +VSW SM Y+ G A ++ M R + D
Sbjct: 200 ---KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDL 256
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
+ +C + L G+++HS I G D+ + N+ ++MY+K D + L F
Sbjct: 257 STFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ + VSW M+ + G +EA+ LF M+ SG KPD VT ++ C G ++ G
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376
Query: 459 FAFFRSMSSEFGLSHGMDHVA---CMVDMLGRGGYVAEAQSL 497
+ + + +G D+V ++DM + G + EA+ +
Sbjct: 377 -KWIDARADIYGCKR--DNVMICNALIDMYSKCGSIHEARDI 415
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 152/357 (42%), Gaps = 41/357 (11%)
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGC--MVHG 230
AWN I R + L LF+EM ++P+ +TF + AC D+ GC MVH
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADV--GCCEMVHA 76
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQK 290
+IKS + S + V + + + K A ++F + +WNA++ + G T K
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 291 AFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACAS 350
AF S+F +M N I D++ ++ + +
Sbjct: 137 AF-------------------------------SLFREMRLNEITPDSVTVMTLIQSASF 165
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD--LVSWN 408
L + +H+ IR G+D + V N+ ++ Y KCGDL+ + L F I D +VSWN
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 409 SMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
SM A+ + G A +A L+ M+ KPD TF + +C + + +G S +
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG-RLIHSHAIH 284
Query: 469 FGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDL 525
G ++ + + M + A+ L + + S+ V++ GD+
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLL---FDIMTSRTCVSWTVMISGYAEKGDM 338
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%)
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH 361
++ +W I + +L +F +M R + +N V ACA LA + +MVH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 362 SCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRAN 421
+ +I+ +FVG + V+M+ KC ++ +A F + E+D +WN+ML F G +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCS 450
+A LFREM + + PD VT ++ + S
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSAS 164
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/614 (28%), Positives = 296/614 (48%), Gaps = 72/614 (11%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDR-DSVAWNAMITAYSHLGLYQQSLSLFG 63
+ LF + S+++ R + LF+ D+ D +WN++I + G ++L F
Sbjct: 6 KKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFS 65
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
SMR + P S+ A+ AC+ G H V GY+S + V+++LI MY C
Sbjct: 66 SMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG 125
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
K DARKVFDE+ P+R ++W +MI G+
Sbjct: 126 KLEDARKVFDEI-------------------------------PKRNIVSWTSMIRGYDL 154
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTF------SALMNACTESRDMLYGCMVHGFVIKSGW 237
G + LFK++ D F ++++AC+ +H FVIK G+
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 238 SSAMEVKNSILSFYAK--LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAF 295
+ V N++L YAK + A ++F+ ++VS+N+I+ + + G + +AF F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 296 QQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILA 355
++ +V++ N+I L ++ AV H+ A L
Sbjct: 275 RRLVKNKVVTF-------------------------NAITLSTVLL-AVSHSGA----LR 304
Query: 356 HGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
GK +H +IR GL+ + VG S+++MY KCG +E + AF + K++ SW +M+ +G
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 416 LHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGM 475
+HG A +A+ LF M+ SGV+P+ +TF +L CSH GL EG+ +F +M FG+ G+
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 476 DHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL 535
+H CMVD+LGR G++ +A L ++ + + LL AC H ++ L
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSII--WSSLLAACRIHKNVELAEISVARL 482
Query: 536 KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSG 595
L+ Y++LS++Y +G+WK+ E VR M ++G+ K PG S +E+ V F+ G
Sbjct: 483 FELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Query: 596 NNSSPYMADISNIL 609
+ P I L
Sbjct: 543 DEEHPQREKIYEFL 556
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/580 (29%), Positives = 270/580 (46%), Gaps = 72/580 (12%)
Query: 36 DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSV 95
+RD +NA+I+ + G ++ + MR + PD +++ + L G V
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLK---GSDAMELSDV 179
Query: 96 --IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANS 153
+H L G+ S V + L+ Y K + DA+KVFDE+ D ++
Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDD------------- 226
Query: 154 SLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM 213
+ WN ++ G+++ E L +F +M E + T ++++
Sbjct: 227 -----------------SVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVL 269
Query: 214 NACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV 273
+A T S D+ G +HG +K+G S + V N+++ Y K + +A +F + +
Sbjct: 270 SAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLF 329
Query: 274 SWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
+WN+++ H GD +G LAL F M +
Sbjct: 330 TWNSVLCVHDYCGDH-----------------------------DGTLAL--FERMLCSG 358
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL----DKYLFVGNSLVNMYAKCGDL 389
I+ D + VL C LA L G+ +H +I GL F+ NSL++MY KCGDL
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418
Query: 390 EGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTC 449
+ + F + KD SWN M+ +G+ A+ +F M +GVKPDE+TF G+L C
Sbjct: 419 RDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQAC 478
Query: 450 SHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGART 509
SH G ++EG F M + + + DH AC++DMLGR + EA LA SK
Sbjct: 479 SHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELA--ISKPICDNP 536
Query: 510 NSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEM 569
+ +L +C HG+ G+ L LEPE GYV++SN+Y +G+++E VR M
Sbjct: 537 VVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAM 596
Query: 570 LDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
Q VKK PG SWI ++N V F +GN + P I + L
Sbjct: 597 RQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 172/409 (42%), Gaps = 77/409 (18%)
Query: 27 ARKLFDEMPDRD-SVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
A+K+FDE+PDRD SV WNA++ YS + ++ +L +F MR + ++ LSA
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFT 273
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G IH L V +G S + V+N+LIDMYGK +A +F+ M
Sbjct: 274 VSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAM---------- 323
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
ER WN+++ H G+ + L LF+ M S +PD
Sbjct: 324 ---------------------DERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGW----SSAMEVKNSILSFYAKLECPSDAM 261
T + ++ C + G +HG++I SG SS + NS++ Y K DA
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
+F+S M++ D+ SW MI GY GEL
Sbjct: 423 MVFDS----------------MRVKDS---------------ASWNIMINGYGVQSCGEL 451
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK-----MVHSCIIRRGLDKYLFVG 376
AL MF M R ++ D + +L AC+ L G+ M I D Y V
Sbjct: 452 ALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV- 510
Query: 377 NSLVNMYAKCGDLEGS-ALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
++M + LE + LA + + V W S+L + LHG + A+
Sbjct: 511 ---IDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 343 AVLHACASLAILAHGKMVHSCIIRRG-LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE 401
A L CA G+ +H ++R+G LD G SLVNMYAKCG + + L F G E
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-E 123
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID----E 457
+D+ +N+++ F ++G +AM +REM A+G+ PD+ TF +L + L D
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVH 183
Query: 458 GFAFFRSMSSEFGLSHGM 475
G AF S+ + G+
Sbjct: 184 GLAFKLGFDSDCYVGSGL 201
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
+ G + AR +FD M +DS +WN MI Y + +L +F M + KPD ++
Sbjct: 413 VKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFV 472
Query: 79 AALSACAGGSHHGF-GSVIHALVVVSGYRSSLPVANS---LIDMYGKCLKPHDARKV-FD 133
L AC SH GF + L + + LP ++ +IDM G+ K +A ++
Sbjct: 473 GLLQAC---SHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAIS 529
Query: 134 EMADSNEVTWCSLL 147
+ N V W S+L
Sbjct: 530 KPICDNPVVWRSIL 543
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 268/579 (46%), Gaps = 63/579 (10%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A KLFDEM + ++V+ MI+AY+ G+ +++ LF M S KP S Y+ L +
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
FG IHA V+ +G S+ + +++MY KC A++VFD+MA V L
Sbjct: 197 PRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGL 256
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
+ Y AG AR L LF ++ + D
Sbjct: 257 MVGYTQ--------------------------AGRARDA-----LKLFVDLVTEGVEWDS 285
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
+ FS ++ AC ++ G +H V K G S + V ++ FY K A F
Sbjct: 286 FVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQE 345
Query: 267 FGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF 326
N VSW+AII + ++ ++A F+ KN
Sbjct: 346 IREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA----------------------- 382
Query: 327 LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC 386
SI L++ ++ AC+ LA G VH+ I+R L + ++L+ MY+KC
Sbjct: 383 ------SI-LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC 435
Query: 387 GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
G L+ + F + D+V+W + + +G A+EA+ LF +MV+ G+KP+ VTF +L
Sbjct: 436 GCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVL 495
Query: 447 MTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSG 506
CSH GL+++G +M ++ ++ +DH CM+D+ R G + EA K
Sbjct: 496 TACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 507 ARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVR 566
A S++ L C H +L G GE L+ L+PE GYV+ NLY +G+W+EA +
Sbjct: 556 AM--SWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMM 613
Query: 567 KEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
K M ++ +KK SWI+ + + F+ G+ P +I
Sbjct: 614 KLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 165/381 (43%), Gaps = 63/381 (16%)
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
S+SY AC G ++H + + S+ + N ++ MY +C DA K+FD
Sbjct: 83 SYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFD 142
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL 193
EM++ N V+ +++ AY A +G ++ +GL
Sbjct: 143 EMSELNAVSRTTMISAY-------------------------------AEQGILDKAVGL 171
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
F M S +P ++ L+ + R + +G +H VI++G S ++ I++ Y
Sbjct: 172 FSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMY-- 229
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY 313
+K G A F Q K V+ T ++VGY
Sbjct: 230 -----------------------------VKCGWLVGAKRVFDQMAVKKPVACTGLMVGY 260
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
T+ G AL +F+D+ ++ D+ V VL ACASL L GK +H+C+ + GL+ +
Sbjct: 261 TQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEV 320
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
VG LV+ Y KC E + AF I E + VSW++++ + + EA+ F+ + +
Sbjct: 321 SVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSK 380
Query: 434 GVKP-DEVTFTGMLMTCSHLG 453
+ T+T + CS L
Sbjct: 381 NASILNSFTYTSIFQACSVLA 401
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 178/421 (42%), Gaps = 77/421 (18%)
Query: 2 HSMRSYLFQTTS---KIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQ 57
H +R+ L TS IV++ + G + A+++FD+M + VA ++ Y+ G +
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 58 SLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLID 117
+L LF + + DSF +S L ACA G IHA V G S + V L+D
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVD 328
Query: 118 MYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTM 177
Y KC A + F E+ + N+V+W +++ Y S F A++ F+S+ + N+
Sbjct: 329 FYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNS- 387
Query: 178 IAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW 237
+T++++ AC+ D G VH IK
Sbjct: 388 -----------------------------FTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
+ ++++++ Y+K C DA E+F S + V+W A I
Sbjct: 419 IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFIS----------------- 461
Query: 298 APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG 357
G+ GN AL +F M ++ +++ AVL AC+ ++ G
Sbjct: 462 --------------GHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQG 507
Query: 358 KMVHSCIIRR-----GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL--EKDLVSWNSM 410
K ++R+ +D Y + ++++YA+ G L+ AL F + E D +SW
Sbjct: 508 KHCLDTMLRKYNVAPTIDHY----DCMIDIYARSGLLD-EALKFMKNMPFEPDAMSWKCF 562
Query: 411 L 411
L
Sbjct: 563 L 563
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 121/284 (42%), Gaps = 31/284 (10%)
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
N + ++ ++ +EM ++ +++ L AC E R + +G ++H +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLA 294
+ ++ ++N +L Y + DA ++F+ N VS
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSR------------------- 152
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
T+MI Y G + A+ +F M + + + + +L + + L
Sbjct: 153 ------------TTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRAL 200
Query: 355 AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAF 414
G+ +H+ +IR GL + +VNMY KCG L G+ F + K V+ ++ +
Sbjct: 201 DFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGY 260
Query: 415 GLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
GRA +A+ LF ++V GV+ D F+ +L C+ L ++ G
Sbjct: 261 TQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 146/474 (30%), Positives = 251/474 (52%), Gaps = 7/474 (1%)
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA---CLGLFKEMCESLYQPD 205
A +N+ A VF P NTMI + E A + +++++ +PD
Sbjct: 56 ACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPD 115
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+TF ++ D+ +G +HG V+ G+ S++ V ++ Y DA +MF+
Sbjct: 116 TFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFD 175
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP--DKNIVSWTSMIVGYTRNGNGELAL 323
+ WNA++ + K+G+ +A + P +N VSWT +I GY ++G A+
Sbjct: 176 EMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAI 235
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
+F M +++ D + AVL ACA L L G+ + S + RG+++ + + N++++MY
Sbjct: 236 EVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMY 295
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
AK G++ + F + E+++V+W +++ HG EA+ +F MV +GV+P++VTF
Sbjct: 296 AKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFI 355
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSK 503
+L CSH+G +D G F SM S++G+ ++H CM+D+LGR G + EA + K
Sbjct: 356 AILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPF 415
Query: 504 TSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAE 563
+ A + LL A + H DL G L LEP Y++L+NLY G+W E+
Sbjct: 416 KANAAI--WGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESR 473
Query: 564 IVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
++R M GVKK+ G S IE+ N V F+SG+ + P + I IL ++++++
Sbjct: 474 MMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 186/410 (45%), Gaps = 38/410 (9%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHL---GLYQQSLSLFGSMRISNSK 71
I + + +G + +A +F P ++ N MI A S L + +++++ + +K
Sbjct: 54 IEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAK 113
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD+F++ L S FG IH VVV G+ SS+ V LI MY C DARK+
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMP--ERVEIAWNTMIAGHARRGEVEA 189
FDEM + W +LL Y A + MP R E++W +I+G+A+ G
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
+ +F+ M +PD+ T A+++AC + + G + +V G + A+ + N+++
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVID 293
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
YAK + A+++F N V+ WT++
Sbjct: 294 MYAKSGNITKALDVFECVNERNVVT-------------------------------WTTI 322
Query: 310 IVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK-MVHSCIIRRG 368
I G +G+G AL+MF M + ++ +++ A+L AC+ + + GK + +S + G
Sbjct: 323 IAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYG 382
Query: 369 LDKYLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFGLH 417
+ + ++++ + G L E + + + W S+L A +H
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 177/618 (28%), Positives = 287/618 (46%), Gaps = 68/618 (11%)
Query: 5 RSYLFQT----TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLS 60
R+YL T + +I L+R G+I ARK FD + + +WN++++ Y GL +++
Sbjct: 10 RTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQ 69
Query: 61 LFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYG 120
LF M S+ + S++ +VSGY + N +I
Sbjct: 70 LFDEM----SERNVVSWNG---------------------LVSGY-----IKNRMI---- 95
Query: 121 KCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAG 180
+AR VF+ M + N V+W +++ Y + G A +F MPER E++W M G
Sbjct: 96 -----VEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGG 150
Query: 181 HARRGEVEACLGLFK-----------EMCESLYQPDQWTFSALMNACTESRDML-YGCMV 228
G ++ L+ M L + + + L+ R+++ + M+
Sbjct: 151 LIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMI 210
Query: 229 HGFVIKSGWSSAMEV-----------KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
G+ + A ++ S+L Y DA E F ++ NA
Sbjct: 211 TGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD 337
+I ++G+ KA F D++ +W MI Y R G AL +F M + ++
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFC 397
++L CA+LA L +G+ VH+ ++R D ++V + L+ MY KCG+L + L F
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDE 457
KD++ WNS++ + HG EA+ +F EM +SG P++VT +L CS+ G ++E
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 458 GFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLG 517
G F SM S+F ++ ++H +C VDMLGR G V +A L + S T + LLG
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIE--SMTIKPDATVWGALLG 508
Query: 518 ACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV 577
AC H L + L EP+ YV+LS++ + +W + +VRK M V K
Sbjct: 509 ACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKF 568
Query: 578 PGSSWIEIRNVVTAFVSG 595
PG SWIE+ V F G
Sbjct: 569 PGCSWIEVGKKVHMFTRG 586
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/455 (31%), Positives = 234/455 (51%), Gaps = 6/455 (1%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
A V + R W +I G+A G+ + + ++ M + P +TFSAL+ AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
+D+ G H + + V N+++ Y K E A ++F+ + +SW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
I A+ ++G+ + A F+ P K++V+WT+M+ G+ +N + AL F M ++ I+ D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDK--YLFVGNSLVNMYAKCGDLEGSALAF 396
+ + ACA L + + G ++ +G++L++MY+KCG++E + F
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA-SGVKPDEVTFTGMLMTCSHLGLI 455
+ K++ +++SM+ HGRA EA+ LF MV + +KP+ VTF G LM CSH GL+
Sbjct: 342 MSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLV 401
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVL 515
D+G F SM FG+ DH CMVD+LGR G + EA L K S + L
Sbjct: 402 DQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHG--GVWGAL 459
Query: 516 LGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
LGAC H + E+L LEP+ Y++LSN+Y ++G W VRK + ++G+K
Sbjct: 460 LGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLK 519
Query: 576 KVPGSSWIEIRN-VVTAFVSGNNSSPYMADISNIL 609
K P SW+ +N + F GN + P I + L
Sbjct: 520 KTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKL 554
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 30/336 (8%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+AR++ + + R+ W A+I Y+ G + ++++++G MR P SF++SA L AC
Sbjct: 101 YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACG 160
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G HA + V N++IDMY KC ARKVFDEM + + ++W
Sbjct: 161 TMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ AYA A E+F S+P + +AW M+ G A+ + + L F M +S + D
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+ T + ++AC + Y KSG+S PSD +
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYS------------------PSDHV---- 318
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
V +A+ID + K G+ ++A F +KN+ +++SMI+G +G + AL +
Sbjct: 319 -------VIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 371
Query: 326 FLDM-TRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
F M T+ I+ + + L AC+ ++ G+ V
Sbjct: 372 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T I + AR G + A +LF+ +P +D VAW AM+T ++ Q++L F M S +
Sbjct: 219 TELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSS--LPVANSLIDMYGKCLKPHDAR 129
D + + +SACA + + SGY S + + ++LIDMY KC +A
Sbjct: 279 ADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAV 338
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
VF M + N T+ S++ A AL +F M + EI NT+ G + A
Sbjct: 339 NVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTV----TFVGALMA 394
Query: 190 C--LGLF---KEMCESLYQPDQWTFSALMNACTESRDMLYGCMV 228
C GL +++ +S+YQ TF +RD Y CMV
Sbjct: 395 CSHSGLVDQGRQVFDSMYQ----TFGV-----QPTRDH-YTCMV 428
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 257/487 (52%), Gaps = 21/487 (4%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL---FKEMCESLYQPDQWTFSALMNA 215
A ++F MP+R +WNT+I G + E +A + + ++ M + +P+++TF +++ A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ--- 272
C ++ + G +HG +K G+ V ++++ Y DA +F
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 273 -----------VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
V WN +ID +M+LGD + A + F + +++VSW +MI GY+ NG +
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A+ +F +M + I+ + + +VL A + L L G+ +H G+ +G++L++
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 317
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MY+KCG +E + F + +++++W++M+ F +HG+A +A+ F +M +GV+P +V
Sbjct: 318 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
+ +L CSH GL++EG +F M S GL ++H CMVD+LGR G + EA+
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKE 561
++ LLGAC G++ G V L + P YV LSN+Y + G W E
Sbjct: 438 PIKPDDVI--WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSE 495
Query: 562 AEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRHT-- 619
+R M ++ ++K PG S I+I V+ FV ++S P +I+++L + ++R
Sbjct: 496 VSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
Query: 620 RPINFDI 626
RPI +
Sbjct: 556 RPITTQV 562
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 22/294 (7%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQ--SLSLFGSMRISNS--KPDSFSYSAAL 81
+A K+F++MP R+ +WN +I +S + +++LF M +S+ +P+ F++ + L
Sbjct: 77 YAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEM-MSDEFVEPNRFTFPSVL 135
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF--------- 132
ACA G IH L + G+ V ++L+ MY C DAR +F
Sbjct: 136 KACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM 195
Query: 133 -----DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
D V W ++ Y A +F M +R ++WNTMI+G++ G
Sbjct: 196 VVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFF 255
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
+ + +F+EM + +P+ T +++ A + + G +H + SG + +++
Sbjct: 256 KDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSAL 315
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA---HMKLGDTQKAFLAFQQA 298
+ Y+K A+ +F N ++W+A+I+ H + GD F +QA
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 146/356 (41%), Gaps = 87/356 (24%)
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
+N C RD+ +H IKSG +M ++ A
Sbjct: 30 INNCRTIRDL---SQIHAVFIKSG-------------------------QMRDTLAAAEI 61
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE--LALSMFLDMT 330
+ + A D H + D A F Q P +N SW ++I G++ + + +A+++F +M
Sbjct: 62 LRFCATSDLHHR--DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMM 119
Query: 331 RNS-IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDL 389
+ ++ + +VL ACA + GK +H ++ G FV ++LV MY CG +
Sbjct: 120 SDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFM 179
Query: 390 -EGSALAFCGILEKDL-------------------------------------------- 404
+ L + I+EKD+
Sbjct: 180 KDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV 239
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRS 464
VSWN+M+ + L+G +A+ +FREM ++P+ VT +L S LG ++ G +
Sbjct: 240 VSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHL 298
Query: 465 MSSEFGLSHGMDHV--ACMVDMLGRGGYVAEA----QSLAKKYSKTSGARTNSYEV 514
+ + G+ +D V + ++DM + G + +A + L ++ T A N + +
Sbjct: 299 YAEDSGIR--IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAI 352
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
R G AR LFD+M R V+WN MI+ YS G ++ ++ +F M+ + +P+ + +
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
L A + G +H SG R + ++LIDMY KC A VF+ + N
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPE----RVEIAWNTMIAGHARRGEVEACLGLFK 195
+TW +++ +A G A++ F M + ++A+ ++ + G VE F
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMV 228
+M + L E R YGCMV
Sbjct: 400 QMV---------SVDGL-----EPRIEHYGCMV 418
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 167/570 (29%), Positives = 268/570 (47%), Gaps = 87/570 (15%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAY----------SHLGLYQQSLSLFGSMRISNSKPDSFS 76
A KLFDEMP R+ V WN +I +HLG S LF + + D S
Sbjct: 90 ADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSL-----DHVS 144
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+ + C ++ G +H L+V G SS + SL+ YGKC +AR+VF+ +
Sbjct: 145 FMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL 204
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
D R + WN +++ + G ++ GL K
Sbjct: 205 D-------------------------------RDLVLWNALVSSYVLNGMIDEAFGLLKL 233
Query: 197 MC--ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
M ++ ++ D +TFS+L++AC + G +H + K + + V ++L+ YAK
Sbjct: 234 MGSDKNRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAKS 289
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
SDA E F S +N+VSW +MIVG+
Sbjct: 290 NHLSDARECFESMVV-------------------------------RNVVSWNAMIVGFA 318
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
+NG G A+ +F M ++Q D L +VL +CA + + K V + + ++G +L
Sbjct: 319 QNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
V NSL++ Y++ G+L + L F I E DLVSW S++ A HG A E++ +F M+
Sbjct: 379 VANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK- 437
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
++PD++TF +L CSH GL+ EG F+ M+ + + +H C++D+LGR G++ EA
Sbjct: 438 LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEA 497
Query: 495 QSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYC 554
+ S + T++ G C+ H + + L +EP K V Y +LSN Y
Sbjct: 498 SDVLN--SMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYV 555
Query: 555 ASGQWKEAEIVRK-EMLDQGVKKVPGSSWI 583
+ G W +A ++RK E + K PG SW+
Sbjct: 556 SEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 159/335 (47%), Gaps = 46/335 (13%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQS---LS 60
+ S F +TS + + G I AR++F+ + DRD V WNA++++Y G+ ++ L
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 61 LFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYG 120
L GS + + + D F++S+ LSAC G IHA++ Y+ +PVA +L++MY
Sbjct: 233 LMGSDK-NRFRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYA 287
Query: 121 KCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAG 180
K DAR+ F+ M N V+W N MI G
Sbjct: 288 KSNHLSDARECFESMVVRNVVSW-------------------------------NAMIVG 316
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
A+ GE + LF +M QPD+ TF++++++C + + V V K G +
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADF 376
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ--- 297
+ V NS++S Y++ S+A+ F+S + VSW ++I A G +++ F+
Sbjct: 377 LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ 436
Query: 298 --APDKNIVSWTSMIVGYTRNGNGELALSMFLDMT 330
PDK +++ ++ + G + L F MT
Sbjct: 437 KLQPDK--ITFLEVLSACSHGGLVQEGLRCFKRMT 469
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 188/466 (40%), Gaps = 102/466 (21%)
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
H +V G +SL + N L+ Y K + DA K+FDE
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDE---------------------- 96
Query: 157 GMALEVFRSMPERVEIAWNTMIAGHARR-GEV--EACLGLFKEMCESLYQP---DQWTFS 210
MP R + WN +I G +R G+ A LG F + L+ D +F
Sbjct: 97 ---------MPLRNIVTWNILIHGVIQRDGDTNHRAHLG-FCYLSRILFTDVSLDHVSFM 146
Query: 211 ALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF 270
L+ CT+S +M G +H ++K G S+ S++ FY K +A +F +
Sbjct: 147 GLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDR 206
Query: 271 NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT 330
+ V WNA++ +++ G +AF L +
Sbjct: 207 DLVLWNALVSSYVLNGMIDEAF-----------------------------GLLKLMGSD 237
Query: 331 RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
+N + D ++L AC + GK +H+ + + + V +L+NMYAK L
Sbjct: 238 KNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLS 293
Query: 391 GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS 450
+ F ++ +++VSWN+M+ F +G EAM LF +M+ ++PDE+TF +L +C+
Sbjct: 294 DARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCA 353
Query: 451 HLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN 510
I E + V MV G +++ A SL YS+
Sbjct: 354 KFSAIWE-----------------IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA 396
Query: 511 -------------SYEVLLGACHAHGDLGTGSSVGE-YLKTLEPEK 542
S+ ++GA +HG + E L+ L+P+K
Sbjct: 397 LLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDK 442
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 3/184 (1%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+S + AR+ F+ M R+ V+WNAMI ++ G ++++ LFG M + N +PD +++
Sbjct: 287 AKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ LS+CA S + A+V G L VANSLI Y + +A F + +
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREP 406
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVE---IAWNTMIAGHARRGEVEACLGLFK 195
+ V+W S++ A A+ +L++F SM ++++ I + +++ + G V+ L FK
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFK 466
Query: 196 EMCE 199
M E
Sbjct: 467 RMTE 470
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 246/452 (54%), Gaps = 10/452 (2%)
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE--SRDMLYGCMVH 229
++W + I R G + F +M + +P+ TF AL++ C + S G ++H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 230 GFVIKSGWS-SAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDT 288
G+ K G + + V +I+ Y+K A +F+ N V+WN +ID +M+ G
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 289 QKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHAC 348
A F + P+++++SWT+MI G+ + G E AL F +M + ++ D + A L+AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 349 ASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWN 408
+L L+ G VH ++ + + V NSL+++Y +CG +E + F + ++ +VSWN
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWN 276
Query: 409 SMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
S++ F +G A+E++ FR+M G KPD VTFTG L CSH+GL++EG +F+ M +
Sbjct: 277 SVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCD 336
Query: 469 FGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEV--LLGACHAHG-DL 525
+ +S ++H C+VD+ R G + +A L + + N + LL AC HG ++
Sbjct: 337 YRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMP----MKPNEVVIGSLLAACSNHGNNI 392
Query: 526 GTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEI 585
+ ++L L + YV+LSN+Y A G+W+ A +R++M G+KK PG S IEI
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Query: 586 RNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
+ + F++G+N+ I +L + ++R
Sbjct: 453 DDCMHVFMAGDNAHVETTYIREVLELISSDLR 484
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 173/421 (41%), Gaps = 73/421 (17%)
Query: 39 SVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG--GSHHGFGSVI 96
+V+W + I + G ++ F M ++ +P+ ++ A LS C G ++
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 97 HALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
H G R+ + V ++I MY K + AR VFD M D N VTW +++ Y S
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
A ++F MPER I+W MI G ++G E L F+EM S +PD A +NA
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSW 275
CT + +G VH +V+ + + + V NS++ Y + C A ++F + VSW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N S+IVG+ NGN +L F M +
Sbjct: 276 N-------------------------------SVIVGFAANGNAHESLVYFRKMQEKGFK 304
Query: 336 LDNLVAGAVLHACASLAILAHGK---MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGS 392
D + L AC+ + ++ G + C R + + LV++Y++ G LE
Sbjct: 305 PDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYR--ISPRIEHYGCLVDLYSRAGRLE-- 360
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
+A+ L + M +KP+EV +L CS+
Sbjct: 361 -----------------------------DALKLVQSM---PMKPNEVVIGSLLAACSNH 388
Query: 453 G 453
G
Sbjct: 389 G 389
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 62/300 (20%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
RSG++ +A K+FD+MP+RD ++W AMI + G +++L F M+IS KPD + A
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
AL+AC FG +H V+ +++++ V+NSLID+Y +C AR+VF M
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
V+W S+ I G A G L F++M E
Sbjct: 272 VVSWNSV-------------------------------IVGFAANGNAHESLVYFRKMQE 300
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
++PD TF+ + AC+ H +++ G L ++ ++C
Sbjct: 301 KGFKPDAVTFTGALTACS-----------HVGLVEEG-----------LRYFQIMKCDYR 338
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGYTRNGN 318
+G ++D + + G + A Q P K N V S++ + +GN
Sbjct: 339 ISPRIEHYG--------CLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 111/257 (43%), Gaps = 35/257 (13%)
Query: 296 QQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA--I 353
Q+ + VSWTS I TRNG A F DMT ++ +++ A+L C
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 354 LAHGKMVHSCIIRRGLDK-YLFVGNSLVNMYAK--------------------------- 385
A G ++H + GLD+ ++ VG +++ MY+K
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 386 ----CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
G ++ +A F + E+DL+SW +M+ F G EA+ FREM SGVKPD V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
L C++LG + G R + S+ + + ++D+ R G V A+ +
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQ-DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 502 SKTSGARTNSYEVLLGA 518
K + NS V A
Sbjct: 268 EKRTVVSWNSVIVGFAA 284
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 235/451 (52%), Gaps = 21/451 (4%)
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
+ MI G G + L+ M + PD + ++++ AC D+ +H V+
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVL 150
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFL 293
K G+ S+ V ++ Y K +A +MF+ + V+ +I+ + + G ++A
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
FQ K+ V WT+MI G RN AL +F +M ++ + A VL AC+ L
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGA 270
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
L G+ VHS + + ++ FVGN+L+NMY++CGD+ + F + +KD++S+N+M+
Sbjct: 271 LELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISG 330
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH 473
+HG + EA+ FR+MV G +P++VT +L CSH GL+D G F SM F +
Sbjct: 331 LAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEP 390
Query: 474 GMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLG----ACHAHGDLGTGS 529
++H C+VD+LGR G + EA Y ++LG AC HG++ G
Sbjct: 391 QIEHYGCIVDLLGRVGRLEEA------YRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 530 SVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVV 589
+ + L E YV+LSNLY +SG+WKE+ +R+ M D G++K PG S IE+ N +
Sbjct: 445 KIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQI 504
Query: 590 TAFVSGNNSSPY-------MADISNILYFLE 613
F+ G+ + P+ + +++ IL F E
Sbjct: 505 HEFLVGDIAHPHKEAIYQRLQELNRILRFKE 535
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 181/395 (45%), Gaps = 37/395 (9%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+A +F + + + + AMI + G +SL+ M ++ PD++ ++ L AC
Sbjct: 79 YAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC- 137
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
IHA V+ G+ SS V ++++YGK + +A+K+FDEM D + V
Sbjct: 138 ---DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATV 194
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
++ Y+ ALE+F+ + + + W MI G R E+ L LF+EM +
Sbjct: 195 MINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSAN 254
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
++T +++AC++ + G VH FV + ME+ N
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFV------------------------ENQRMELSN 290
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
G NA+I+ + + GD +A F+ DK+++S+ +MI G +G A++
Sbjct: 291 FVG-------NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVNMYA 384
F DM + + + A+L+AC+ +L G V + + R ++ + +V++
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403
Query: 385 KCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHG 418
+ G LE + I +E D + ++L A +HG
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG 438
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 62/229 (27%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS----------- 68
+SG + +A+K+FDEMPDRD VA MI YS G +++L LF ++I
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 229
Query: 69 --------------------NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSS 108
N + F+ LSAC+ G +H+ V S
Sbjct: 230 LVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELS 289
Query: 109 LPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPE 168
V N+LI+MY +C ++AR+V FR M +
Sbjct: 290 NFVGNALINMYSRCGDINEARRV-------------------------------FRVMRD 318
Query: 169 RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACT 217
+ I++NTMI+G A G + F++M ++P+Q T AL+NAC+
Sbjct: 319 KDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS 367
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 110/273 (40%), Gaps = 45/273 (16%)
Query: 285 LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
L A+ F + N+ +T+MI G+ +G +S++ M NS+ DN V +V
Sbjct: 74 LDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSV 133
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF-------- 396
L AC L + +H+ +++ G VG ++ +Y K G+L + F
Sbjct: 134 LKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDH 189
Query: 397 ------------CGILE-----------KDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
CG ++ KD V W +M+ + N+A+ LFREM
Sbjct: 190 VAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME 249
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEG---FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
V +E T +L CS LG ++ G +F + E G +++M R G
Sbjct: 250 NVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG----NALINMYSRCGD 305
Query: 491 VAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
+ EA+ + + SY ++ HG
Sbjct: 306 INEARRV---FRVMRDKDVISYNTMISGLAMHG 335
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 243/484 (50%), Gaps = 37/484 (7%)
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
DS+ SL+ Y++S LF A +F ++ + W MI G R G + F E
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA-MEVKNSILSFYAKLE 255
M ++ ++ T +++ A + D+ +G VHG +++G + + +S++ Y K
Sbjct: 195 MKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCS 254
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
C DA ++F+ + P +N+V+WT++I GY +
Sbjct: 255 CYDDAQKVFD-------------------------------EMPSRNVVTWTALIAGYVQ 283
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
+ + + +F +M ++ + + +VL ACA + L G+ VH +I+ ++
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA 343
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
G +L+++Y KCG LE + L F + EK++ +W +M+ F HG A +A LF M++S V
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHV 403
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
P+EVTF +L C+H GL++EG F SM F + DH ACMVD+ GR G + EA+
Sbjct: 404 SPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAK 463
Query: 496 SLAKKYSKTSGARTN-SYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYC 554
+L ++ TN + L G+C H D G + L+P Y +L+NLY
Sbjct: 464 ALIERMPMEP---TNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYS 520
Query: 555 ASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMA-DISNILYFLE 613
S W E VRK+M DQ V K PG SWIE++ + F++ ++ P + D+ L +
Sbjct: 521 ESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVG 580
Query: 614 IEMR 617
++MR
Sbjct: 581 VQMR 584
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 152/351 (43%), Gaps = 63/351 (17%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F S I + SG A +LFD D+D V W AMI + G +++ F M+ +
Sbjct: 139 FVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKT 198
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSG-YRSSLPVANSLIDMYGKCLKPHD 127
+ + + L A FG +H L + +G + + + +SL+DMYGKC D
Sbjct: 199 GVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDD 258
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A+KVFDE MP R + W +IAG+ +
Sbjct: 259 AQKVFDE-------------------------------MPSRNVVTWTALIAGYVQSRCF 287
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
+ + +F+EM +S P++ T S++++AC + G VH ++IK NSI
Sbjct: 288 DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK----------NSI 337
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
N + +ID ++K G ++A L F++ +KN+ +WT
Sbjct: 338 ---------------------EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWT 376
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK 358
+MI G+ +G A +F M + + + + AVL ACA ++ G+
Sbjct: 377 AMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGR 427
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 302 NIVSWTSMIVGYTRNG---NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK 358
+I W S+I G+ G N L+ + M RN + +L A L ++
Sbjct: 66 SIQLWDSLI-GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPF 123
Query: 359 MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
H+ I++ GLD FV NSL++ Y+ G + ++ F G +KD+V+W +M+ F +G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV 478
A+EAM F EM +GV +E+T +L + E F RS+ GL V
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKV----EDVRFGRSVH---GLYLETGRV 236
Query: 479 AC-------MVDMLGRGGYVAEAQSL 497
C +VDM G+ +AQ +
Sbjct: 237 KCDVFIGSSLVDMYGKCSCYDDAQKV 262
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 262/570 (45%), Gaps = 69/570 (12%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHL-GLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGS 88
LF + + ++N MI ++ ++ +LSL+ M+ S KPD F+Y+ ACA
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 89 HHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLF 148
G G +H+ + G + + +SLI MY KC + ARK+
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKL----------------- 189
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
F + ER ++WN+MI+G++ G + + LF++M E ++PD+ T
Sbjct: 190 --------------FDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
+++ AC+ D+ G ++ I + + + ++S Y K C
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGK--C------------ 281
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
GD A F Q K+ V+WT+MI Y++NG A +F +
Sbjct: 282 -----------------GDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFE 324
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
M + + D VL AC S+ L GK + + L ++V LV+MY KCG
Sbjct: 325 MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGR 384
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
+E + F + K+ +WN+M+ A+ G A EA+ LF M V P ++TF G+L
Sbjct: 385 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA 441
Query: 449 CSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGAR 508
C H GL+ +G +F MSS FGL ++H ++D+L R G + EA +++
Sbjct: 442 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 501
Query: 509 TNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG-YVMLSNLYCASGQWKEAEIVRK 567
+ +LGACH D+ L ++ K G YV+ SN+ W E+ +R
Sbjct: 502 MLA--AILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRA 559
Query: 568 EMLDQGVKKVPGSSWIEIRNVVTAFVSGNN 597
M D+GV K PG SWIEI + F++G++
Sbjct: 560 LMRDRGVVKTPGCSWIEIEGELMEFLAGSD 589
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 33/294 (11%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP 72
S I+ A+ G++ +ARKLFDE+ +RD+V+WN+MI+ YS G + ++ LF M +P
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
D + + L AC+ G ++ + + S + + LI MYGKC AR+VF
Sbjct: 232 DERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF 291
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
++M + V W +++ Y+ + G + E F+
Sbjct: 292 NQMIKKDRVAWTAMITVYSQN---GKSSEAFK---------------------------- 320
Query: 193 LFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
LF EM ++ PD T S +++AC + G + + + V ++ Y
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ--APDKNIV 304
K +A+ +F + N+ +WNA+I A+ G ++A L F + P +I
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDIT 434
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG-ELALSMFLDMTRNSI 334
N +I ++LGD + F + N S+ MI G T N E ALS++ M + +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
+ D V ACA L + G+ VHS + + GL++ + + +SL+ MYAKCG + +
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F I E+D VSWNSM+ + G A +AM LFR+M G +PDE T ML CSHLG
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 455 IDEG 458
+ G
Sbjct: 249 LRTG 252
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S++ ++ T + + GR+ A ++F+ MP ++ WNAMITAY+H G +++L LF
Sbjct: 364 SLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLF 423
Query: 63 GSMRISNSKPDSFSYSAALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYG 120
M + P ++ LSAC AG H G H + + G + ++ID+
Sbjct: 424 DRMSVP---PSDITFIGVLSACVHAGLVHQG-CRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 121 K 121
+
Sbjct: 480 R 480
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/570 (29%), Positives = 270/570 (47%), Gaps = 67/570 (11%)
Query: 20 RSGRICHARKLFDEMP--DRDSVAWNAMITAYSH--LGLYQQSLSLFGSMRISNSKPDSF 75
+S R+ A F+ +P R+ +WN +++ YS Y L L+ MR DSF
Sbjct: 51 QSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSF 110
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
+ A+ AC G G +IH L + +G VA SL++MY + A+KVFDE+
Sbjct: 111 NLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEI 170
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
P R + W ++ G+ + + LF
Sbjct: 171 -------------------------------PVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
M ++ D T L+ AC G VHG I+ SF +
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRR-------------SFIDQ-- 244
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
SD ++ +IID ++K A F+ + D+N+V WT++I G+ +
Sbjct: 245 --SDYLQA-------------SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAK 289
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
A +F M R SI + A+L +C+SL L HGK VH +IR G++
Sbjct: 290 CERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN 349
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
S ++MYA+CG+++ + F + E++++SW+SM+ AFG++G EA+ F +M + V
Sbjct: 350 FTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV 409
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
P+ VTF +L CSH G + EG+ F SM+ ++G+ +H ACMVD+LGR G + EA+
Sbjct: 410 VPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAK 469
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCA 555
S A +++ LL AC H ++ + E L ++EPEK YV+LSN+Y
Sbjct: 470 SFIDNMPVKPMA--SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYAD 527
Query: 556 SGQWKEAEIVRKEMLDQGVKKVPGSSWIEI 585
+G W+ VR++M +G +K G S E+
Sbjct: 528 AGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 143/332 (43%), Gaps = 63/332 (18%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G + A+K+FDE+P R+SV W ++ Y + LF MR + D+ +
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ AC G +H + + + S + S+IDMY KC +ARK+F+ D
Sbjct: 215 CLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVD 274
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
N V W T+I+G A+ LF++M
Sbjct: 275 RNVVM-------------------------------WTTLISGFAKCERAVEAFDLFRQM 303
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
P+Q T +A++ +C+ + +G VHG++I++G
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG--------------------- 342
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
+EM + V++ + ID + + G+ Q A F P++N++SW+SMI + NG
Sbjct: 343 ---IEM-------DAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGING 392
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACA 349
E AL F M ++ +++ ++L AC+
Sbjct: 393 LFEEALDCFHKMKSQNVVPNSVTFVSLLSACS 424
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 145 SLLFAYANSSLFGMALEVFRSMP--ERVEIAWNTMIAGHARRGEV--EACLGLFKEMCES 200
SL AY S+ A F +P +R +WNT+++G+++ L L+ M
Sbjct: 44 SLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRH 103
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
D + + AC + G ++HG +K+G V S++ YA+L A
Sbjct: 104 CDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESA 163
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
++F+ N V W ++ K +L + + P+
Sbjct: 164 QKVFDEIPVRNSVLWGVLM----------KGYLKYSKDPE-------------------- 193
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG-LDKYLFVGNSL 379
+F M + LD L ++ AC ++ GK VH IRR +D+ ++ S+
Sbjct: 194 -VFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASI 252
Query: 380 VNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDE 439
++MY KC L+ + F +++++V W +++ F RA EA LFR+M+ + P++
Sbjct: 253 IDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ 312
Query: 440 VTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
T +L++CS LG + G + M G+ + +DM R G + A+++
Sbjct: 313 CTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCGNIQMARTV 369
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAP--DKNIVSWTSMIVGYTRNGNG--ELALSMFLDMTR 331
+++ +A+++ A +F + P +N SW +++ GY+++ L ++ M R
Sbjct: 43 SSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRR 102
Query: 332 NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEG 391
+ +D+ + AC L +L +G ++H ++ GLDK +V SLV MYA+ G +E
Sbjct: 103 HCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMES 162
Query: 392 SALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSH 451
+ F I ++ V W ++ + + + E LF M +G+ D +T ++ C +
Sbjct: 163 AQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222
Query: 452 L 452
+
Sbjct: 223 V 223
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS I AR G I AR +FD MP+R+ ++W++MI A+ GL++++L F M+ N
Sbjct: 351 TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV 410
Query: 72 PDSFSYSAALSACAGGSHHG 91
P+S ++ + LSAC SH G
Sbjct: 411 PNSVTFVSLLSAC---SHSG 427
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/564 (28%), Positives = 258/564 (45%), Gaps = 63/564 (11%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
++G + A LF MP + V+WN +I+ + G ++L M+ D F+
Sbjct: 185 KAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPC 243
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
L AC+ G G +H VV SG SS ++LIDMY C A VF + +
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA- 302
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
NSS+ WN+M++G E EA L L ++ +
Sbjct: 303 -----------VNSSV----------------AVWNSMLSGFLINEENEAALWLLLQIYQ 335
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
S D +T S + C ++ G VH V+ SG+
Sbjct: 336 SDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE--------------------- 374
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
+ + + ++D H +G+ Q A F + P+K+I++++ +I G ++G
Sbjct: 375 ----------LDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSL 379
LA +F ++ + + D + +L C+SLA L GK +H I++G + +L
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATAL 484
Query: 380 VNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDE 439
V+MY KCG+++ + F G+LE+D+VSW ++ FG +GR EA F +M+ G++P++
Sbjct: 485 VDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNK 544
Query: 440 VTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAK 499
VTF G+L C H GL++E + +M SE+GL ++H C+VD+LG+ G EA L
Sbjct: 545 VTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELIN 604
Query: 500 KYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQW 559
K + LL AC H + G + + E L P+ Y LSN Y G W
Sbjct: 605 KMPLEPDKTI--WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMW 662
Query: 560 KEAEIVRKEMLDQGVKKVPGSSWI 583
+ VR+ G K+ G SWI
Sbjct: 663 DQLSKVREAAKKLGAKE-SGMSWI 685
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/590 (24%), Positives = 245/590 (41%), Gaps = 84/590 (14%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP-DSFSYSAALSACA 85
A K+FDEM +R+ V W M++ Y+ G +++ L+ M S + + F YSA L AC
Sbjct: 59 AHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACG 118
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G +++ + R + + NS++DMY K + +A F E+ + +W +
Sbjct: 119 LVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT 178
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ Y + L A+ +F MP+ ++WN +I+G +G A L + E L D
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL-D 237
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+ + AC+ + G +H V+KSG S+
Sbjct: 238 GFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESS------------------------- 272
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ---APDKNIVSWTSMIVGYTRNGNGELA 322
+ +A+ID + G A F Q A + ++ W SM+ G+ N E A
Sbjct: 273 ------PFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAA 326
Query: 323 LSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
L + L + ++ + D+ L C + L G VHS ++ G + VG+ LV++
Sbjct: 327 LWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDL 386
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
+A G+++ + F + KD+++++ ++ G + A LFRE++ G+ D+
Sbjct: 387 HANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIV 446
Query: 443 TGMLMTCSHL-----------------------------------GLIDEGFAFFRSMSS 467
+ +L CS L G ID G F M
Sbjct: 447 SNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM-- 504
Query: 468 EFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN--SYEVLLGACHAHGDL 525
L + ++ G+ G V EA K G N ++ LL AC G L
Sbjct: 505 ---LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI-GIEPNKVTFLGLLSACRHSGLL 560
Query: 526 GTGSSVGEYLKT---LEPEKEVGYVMLSNLYCASGQWKEA-EIVRKEMLD 571
S E +K+ LEP E Y + +L +G ++EA E++ K L+
Sbjct: 561 EEARSTLETMKSEYGLEPYLE-HYYCVVDLLGQAGLFQEANELINKMPLE 609
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 166/375 (44%), Gaps = 34/375 (9%)
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+A L C G I A V+ G ++ +AN++I MY DA KVFDEM++
Sbjct: 9 AAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSE 68
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
N VTW +++ Y + A+E++R M + E A N
Sbjct: 69 RNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAAN---------------------- 106
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
++ +SA++ AC D+ G +V+ + K + + NS++ Y K
Sbjct: 107 --------EFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRL 158
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
+A F + SWN +I + K G +A F + P N+VSW +I G+ G
Sbjct: 159 IEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG 218
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
+ AL + M R + LD L AC+ +L GK +H C+++ GL+ F +
Sbjct: 219 SPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAIS 277
Query: 378 SLVNMYAKCGDLEGSALAFCG---ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
+L++MY+ CG L +A F + + WNSML F ++ A+ L ++ S
Sbjct: 278 ALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSD 337
Query: 435 VKPDEVTFTGMLMTC 449
+ D T +G L C
Sbjct: 338 LCFDSYTLSGALKIC 352
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 31/201 (15%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A G I A KLF +P++D +A++ +I G + LF + D F S
Sbjct: 388 ANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVS 447
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
L C+ + G+G IH L + GY S A +L+DMY KC + + +FD M +
Sbjct: 448 NILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER 507
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ V+W + I G + G VE F +M
Sbjct: 508 DVVSWTGI-------------------------------IVGFGQNGRVEEAFRYFHKMI 536
Query: 199 ESLYQPDQWTFSALMNACTES 219
+P++ TF L++AC S
Sbjct: 537 NIGIEPNKVTFLGLLSACRHS 557
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 94/185 (50%), Gaps = 5/185 (2%)
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFC 397
L+A + H C + G+ + + +I++G+ + +F+ N++++MY L + F
Sbjct: 6 KLIAAGLRH-CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFD 64
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK-PDEVTFTGMLMTCSHLGLID 456
+ E+++V+W +M+ + G+ N+A+ L+R M+ S + +E ++ +L C +G I
Sbjct: 65 EMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQ 124
Query: 457 EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLL 516
G + + E L + + +VDM + G + EA S K+ + S N+ ++
Sbjct: 125 LGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNT--LIS 181
Query: 517 GACHA 521
G C A
Sbjct: 182 GYCKA 186
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 164/576 (28%), Positives = 262/576 (45%), Gaps = 64/576 (11%)
Query: 39 SVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHA 98
S WN + ++ L+ +S+SL+ SM S S PD+FS+ L +CA S G +H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 99 LVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGM 158
V G + V +LI MY KC DARKVF+E S++++ C
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVC-------------- 123
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
+N +I+G+ +V +F+ M E+ D T L+ CT
Sbjct: 124 ---------------YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTV 168
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
+ G +HG +K G S + V NS ++ Y
Sbjct: 169 PEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMY--------------------------- 201
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
MK G + F + P K +++W ++I GY++NG L ++ M + + D
Sbjct: 202 ----MKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
+VL +CA L G V + G +FV N+ ++MYA+CG+L + F
Sbjct: 258 FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ K LVSW +M+ +G+HG + LF +M+ G++PD F +L CSH GL D+G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS-KTSGARTNSYEVLLG 517
FR+M E+ L G +H +C+VD+LGR G + EA + + GA + LLG
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGA---VWGALLG 434
Query: 518 ACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV 577
AC H ++ + EP YV++SN+Y S + +R M ++ +K
Sbjct: 435 ACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK 494
Query: 578 PGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLE 613
PG S++E + V F++G+ S ++ +L LE
Sbjct: 495 PGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELE 530
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 176/432 (40%), Gaps = 76/432 (17%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRD--SVAWNAMITAYSHLGLYQQSLSLFGSMR 66
F T+ I + G + ARK+F+E P SV +NA+I+ Y+ + +F M+
Sbjct: 89 FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMK 148
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
+ DS + + C + G +H V G S + V NS I MY KC
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
R++FDEM +TW N +I+G+++ G
Sbjct: 209 AGRRLFDEMPVKGLITW-------------------------------NAVISGYSQNGL 237
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
L L+++M S PD +T +++++C G V V +G+ + V N+
Sbjct: 238 AYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNA 297
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
+S YA+ G+ KA F P K++VSW
Sbjct: 298 SISMYAR-------------------------------CGNLAKARAVFDIMPVKSLVSW 326
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
T+MI Y +G GE+ L +F DM + I+ D V VL AC+ + G + + R
Sbjct: 327 TAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKR 386
Query: 367 R-----GLDKYLFVGNSLVNMYAKCGDLEGSALAFCG--ILEKDLVSWNSMLFAFGLHGR 419
G + Y + LV++ + G L+ A+ F +E D W ++L A +H
Sbjct: 387 EYKLEPGPEHY----SCLVDLLGRAGRLD-EAMEFIESMPVEPDGAVWGALLGACKIHKN 441
Query: 420 ANEAMCLFREMV 431
+ A F +++
Sbjct: 442 VDMAELAFAKVI 453
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F + + I AR G + AR +FD MP + V+W AMI Y G+ + L LF M
Sbjct: 292 VFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK 351
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFG----SVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
+PD + LSAC SH G + A+ + L+D+ G+
Sbjct: 352 RGIRPDGAVFVMVLSAC---SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAG 408
Query: 124 KPHDARKVFDEM-ADSNEVTWCSLLFA 149
+ +A + + M + + W +LL A
Sbjct: 409 RLDEAMEFIESMPVEPDGAVWGALLGA 435
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 272/562 (48%), Gaps = 75/562 (13%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSAC-A 85
ARKLFD P+R WN++I AY+ + LSLF + S+++PD+F+Y AC A
Sbjct: 59 ARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTY-----ACLA 113
Query: 86 GGSHHGFGS----VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
G F + IH + +VSG FD++ S
Sbjct: 114 RGFSESFDTKGLRCIHGIAIVSGLG-------------------------FDQICGS--- 145
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
+++ AY+ + L A ++F S+P+ WN MI G+ G + + LF M
Sbjct: 146 ---AIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
+QP+ +T AL + + +L VH F +K S V ++++ Y++ C + A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
+FNS PD +V+ +S+I GY+R GN +
Sbjct: 263 SVFNSI-----------------------------SEPD--LVACSSLITGYSRCGNHKE 291
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
AL +F ++ + + D ++ VL +CA L+ GK VHS +IR GL+ + V ++L++
Sbjct: 292 ALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALID 351
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
MY+KCG L+ + F GI EK++VS+NS++ GLHG A+ A F E++ G+ PDE+T
Sbjct: 352 MYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEIT 411
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
F+ +L TC H GL+++G F M SEFG+ +H MV ++G G + EA
Sbjct: 412 FSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSL 471
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL-KTLEPEKEVGYVMLSNLYCASGQWK 560
K + LL C H + V E + K E + V VMLSN+Y G+W
Sbjct: 472 QKP--IDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWD 529
Query: 561 EAEIVRKEMLDQGVKKVPGSSW 582
E E +R + + K+PG SW
Sbjct: 530 EVERLRDGISESYGGKLPGISW 551
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
+R I A +F+ + + D VA +++IT YS G ++++L LF +R+S KPD +
Sbjct: 253 SRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVA 312
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
L +CA S G +H+ V+ G + V ++LIDMY KC
Sbjct: 313 IVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKC---------------- 356
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
L A+ +F +PE+ +++N++I G G F E+
Sbjct: 357 ---------------GLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEIL 401
Query: 199 ESLYQPDQWTFSALMNACTES 219
E PD+ TFSAL+ C S
Sbjct: 402 EMGLIPDEITFSALLCTCCHS 422
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 249 bits (635), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 164/604 (27%), Positives = 281/604 (46%), Gaps = 77/604 (12%)
Query: 29 KLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS------FSYSAALS 82
++F+ + + V++ A+I + +++ +F M + DS S SA
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 83 ACAGGSH---HGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
C S + G IH L + G+ L + NSL+++Y K + A +F EM + N
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVN 314
Query: 140 EVTWCSLLFAYANS--------------------------SLFGMALE---------VFR 164
V+W ++ + S+ G +F
Sbjct: 315 VVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFS 374
Query: 165 SMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLY 224
S+P+ AWN M++G++ E + F++M +PD+ T S ++++C R +
Sbjct: 375 SIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEG 434
Query: 225 GCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMK 284
G +HG VI++ S + + +++ Y++ E ME+ ++ ++ I+
Sbjct: 435 GKQIHGVVIRTEISKNSHIVSGLIAVYSECE----KMEI-------SECIFDDCIN---- 479
Query: 285 LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA- 343
+ +I W SMI G+ N AL +F M + ++ N + A
Sbjct: 480 ---------------ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFAT 524
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
VL +C+ L L HG+ H +++ G FV +L +MY KCG+++ + F +L K+
Sbjct: 525 VLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKN 584
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
V WN M+ +G +GR +EA+ L+R+M++SG KPD +TF +L CSH GL++ G
Sbjct: 585 TVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILS 644
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
SM G+ +DH C+VD LGR G + +A+ LA+ S + +E+LL +C HG
Sbjct: 645 SMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVL--WEILLSSCRVHG 702
Query: 524 DLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWI 583
D+ V E L L+P+ YV+LSN Y + QW ++ ++ M V K PG SW
Sbjct: 703 DVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWT 762
Query: 584 EIRN 587
N
Sbjct: 763 TYGN 766
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 187/382 (48%), Gaps = 39/382 (10%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G VIH +V G +S + N L+D+Y +C ARKVFDEM+ + +W + L
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
G A EVF MPER ++WN MI+ R+G E L ++K M + P ++T +++
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ 272
++AC++ D ++G HG +K+G + V N++LS YAK
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKC------------------ 186
Query: 273 VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN 332
I+D +++ F+ N VS+T++I G R A+ MF M
Sbjct: 187 ---GFIVDYGVRV---------FESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEK 234
Query: 333 SIQLDNLVAGAVL------HACASLAIL---AHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
+Q+D++ +L C SL+ + GK +H +R G L + NSL+ +Y
Sbjct: 235 GVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIY 294
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
AK D+ G+ L F + E ++VSWN M+ FG R+++++ M SG +P+EVT
Sbjct: 295 AKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCI 354
Query: 444 GMLMTCSHLGLIDEGFAFFRSM 465
+L C G ++ G F S+
Sbjct: 355 SVLGACFRSGDVETGRRIFSSI 376
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 149/587 (25%), Positives = 246/587 (41%), Gaps = 89/587 (15%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G + A ++FD MP+RD V+WN MI+ G +++L ++ M P F+ ++
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD-ARKVFDEMADS 138
LSAC+ FG H + V +G ++ V N+L+ MY KC D +VF+ ++
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
NEV++ +I G AR +V + +F+ MC
Sbjct: 204 NEVSY-------------------------------TAVIGGLARENKVLEAVQMFRLMC 232
Query: 199 ESLYQPDQWTFSALM--NACTESRDML-------YGCMVHGFVIKSGWSSAMEVKNSILS 249
E Q D S ++ +A E D L G +H ++ G+ + + NS+L
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLE 292
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWN--------------------------------- 276
YAK + + A +F N VSWN
Sbjct: 293 IYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT 352
Query: 277 --AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI 334
+++ A + GD + F P ++ +W +M+ GY+ + E A+S F M ++
Sbjct: 353 CISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
+ D +L +CA L L GK +H +IR + K + + L+ +Y++C +E S
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 395 AF--CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK-PDEVTFTGMLMTCSH 451
F C I E D+ WNSM+ F + +A+ LFR M + V P+E +F +L +CS
Sbjct: 473 IFDDC-INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 452 LGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
L + G F + +S A + DM + G + A+ + + N
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFFDAVLRKNTVIWNE 590
Query: 512 YEVLLGACHAHGDLGTG-SSVGEYLKTLEP-EKEVGYVMLSNLYCAS 556
H +G G G +VG Y K + EK G +S L S
Sbjct: 591 ------MIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 142/297 (47%), Gaps = 9/297 (3%)
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
++L+ + R L G ++HGF+++ G S + N +L Y + A ++F+
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
+ SWNA + K+GD +A F P++++VSW +MI R G E AL ++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
M + +VL AC+ + G H ++ GLDK +FVGN+L++MYAKCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 389 L-EGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLM 447
+ + F + + + VS+ +++ + EA+ +FR M GV+ D V + +L
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 448 TCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+ D S+S +G G + C+ LG GG + SL + Y+K
Sbjct: 249 ISAPREGCD-------SLSEIYGNELG-KQIHCLALRLGFGGDLHLNNSLLEIYAKN 297
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 173/408 (42%), Gaps = 76/408 (18%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
RSG + R++F +P AWNAM++ YS+ Y++++S F M+ N KPD + S
Sbjct: 362 RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSV 421
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
LS+CA G IH +V+ + + + + LI +Y +C K + +FD+ +
Sbjct: 422 ILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINEL 481
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
++ WN+MI+G L LF+ M +
Sbjct: 482 DIA------------------------------CWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 200 S-LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+ + P++ +F+ ++++C+ +L+G HG V+KSG+ S V+ ++ Y K
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEID 571
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
A + F++ N V WN MI GY NG
Sbjct: 572 SARQFFDAVLRKNTVIWN-------------------------------EMIHGYGHNGR 600
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACA-------SLAILAHGKMVHSCIIRRGLDK 371
G+ A+ ++ M + + D + +VL AC+ L IL+ + +H I LD
Sbjct: 601 GDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG--IEPELDH 658
Query: 372 YLFVGNSLVNMYAKCGDLE-GSALAFCGILEKDLVSWNSMLFAFGLHG 418
Y+ +V+ + G LE LA + V W +L + +HG
Sbjct: 659 YI----CIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHG 702
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/604 (27%), Positives = 275/604 (45%), Gaps = 67/604 (11%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I S R G I +ARK+FDE+P R +N+MI YS + L L+ M +PDS
Sbjct: 57 IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDS 116
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+++ + AC G G + V GY++ + V +S++++Y KC K +A +F +
Sbjct: 117 STFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGK 176
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
MA +R I W TM+ G A+ G+ + +
Sbjct: 177 MA-------------------------------KRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
+EM + D+ L+ A + D G VHG++ ++G + V+ S++ YAK+
Sbjct: 206 REMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
G + A F + K VSW S+I G+
Sbjct: 266 -------------------------------GFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG-LDKYL 373
+NG A ++M Q D + VL AC+ + L G++VH I++R LD+
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR-- 352
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
+L++MY+KCG L S F + KDLV WN+M+ +G+HG E + LF +M S
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
++PD TF +L SH GL+++G +F M +++ + H C++D+L R G V E
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
A + S+ + LL C H +L G + L P+ ++SN +
Sbjct: 473 ALDMIN--SEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFF 530
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLE 613
+ +WKE VRK M + ++KVPG S IE+ + F+ + S + +L L+
Sbjct: 531 ATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLK 590
Query: 614 IEMR 617
E+R
Sbjct: 591 TEIR 594
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 75/352 (21%)
Query: 3 SMRSYLFQT---------TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLG 53
S+ YL++T TS + A+ G I A ++F M + +V+W ++I+ ++ G
Sbjct: 238 SVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNG 297
Query: 54 LYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVAN 113
L ++ M+ +PD + L AC+ G ++H ++ + A
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TAT 356
Query: 114 SLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIA 173
+L+DMY KC +R++F+ + + V
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLV-------------------------------C 385
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
WNTMI+ + G + + LF +M ES +PD TF++L++A + S G + G
Sbjct: 386 WNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHS-----GLVEQG--- 437
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF- 292
W S M K I PS+ + +ID + G ++A
Sbjct: 438 -QHWFSVMINKYKIQ--------PSEK-------------HYVCLIDLLARAGRVEEALD 475
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGN---GELALSMFLDMTRNSIQLDNLVA 341
+ + D + W +++ G + N G++A + L + +SI + LV+
Sbjct: 476 MINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVS 527
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 180/641 (28%), Positives = 293/641 (45%), Gaps = 79/641 (12%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G + A K+FDE+PDR++VAWNA++ Y G ++++ LF MR +P + S
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVST 279
Query: 80 ALSACA--GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
LSA A GG G S HA+ +V+G + SL++ Y K A VFD M
Sbjct: 280 CLSASANMGGVEEGKQS--HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMF- 336
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
E+ + WN +I+G+ ++G VE + + + M
Sbjct: 337 ------------------------------EKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
+ D T + LM+A + ++ G V + I+ + S + + ++++ YAK
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 258 SDAMEMFNS------------FGAF-----------------------NQVSWNAIIDAH 282
DA ++F+S A+ N ++WN II +
Sbjct: 427 VDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 283 MKLGDTQKA---FLAFQQAPD-KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
++ G +A FL Q + N++SWT+M+ G +NG E A+ M + ++ +
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF-VGNSLVNMYAKCGDLEGSALAFC 397
L ACA LA L G+ +H IIR L + SLV+MYAKCGD+ + F
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDE 457
L +L N+M+ A+ L+G EA+ L+R + G+KPD +T T +L C+H G I++
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQ 666
Query: 458 GFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLG 517
F + S+ + ++H MVD+L G +A L ++ AR + L+
Sbjct: 667 AIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARM--IQSLVA 724
Query: 518 ACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV 577
+C+ + L EPE YV +SN Y G W E +R+ M +G+KK
Sbjct: 725 SCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKK 784
Query: 578 PGSSWIEI--RNVVTAFVSGNNSSPYMADISNILYFLEIEM 616
PG SWI+I V FV+ + + + +I +L L +M
Sbjct: 785 PGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 245/558 (43%), Gaps = 68/558 (12%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T ++ A+ + A LF ++ R+ +W A+I +GL + +L F M +
Sbjct: 111 TKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF 170
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD+F AC FG +H VV SG + VA+SL DMYGKC DA KV
Sbjct: 171 PDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKV 230
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FDE+ P+R +AWN ++ G+ + G+ E +
Sbjct: 231 FDEI-------------------------------PDRNAVAWNALMVGYVQNGKNEEAI 259
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
LF +M + +P + T S ++A + G H I +G
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG--------------- 304
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
ME+ N G ++++ + K+G + A + F + +K++V+W +I
Sbjct: 305 ---------MELDNILGT-------SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIIS 348
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY + G E A+ M M ++ D + ++ A A L GK V IR +
Sbjct: 349 GYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES 408
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
+ + +++++MYAKCG + + F +EKDL+ WN++L A+ G + EA+ LF M
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ 468
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
GV P+ +T+ ++++ G +DE F M S G+ + M++ + + G
Sbjct: 469 LEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCS 527
Query: 492 AEAQSLAKKYSKTSGARTNSYE--VLLGACHAHGDLGTGSSV-GEYLKTLEPEKEVGY-V 547
EA +K + SG R N++ V L AC L G ++ G ++ L+ V
Sbjct: 528 EEAILFLRKMQE-SGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET 586
Query: 548 MLSNLYCASGQWKEAEIV 565
L ++Y G +AE V
Sbjct: 587 SLVDMYAKCGDINKAEKV 604
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 202/500 (40%), Gaps = 74/500 (14%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMP-DRDSVAWNAMITAYSHLGLYQQSLSLF 62
M S F T V + S + + K DE S ++ +++ G +++LSL
Sbjct: 1 MASLPFNTIPNKVPFSVSSK--PSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLV 58
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
M N + Y L C G IHA ++ +G D Y +
Sbjct: 59 TEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG------------DFYAR- 105
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
NE L+ YA +A +F + R +W +I
Sbjct: 106 ----------------NEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
R G E L F EM E+ PD + + AC + +G VHG+V+KSG +
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
V +S+ Y K DA ++F+ + PD+N
Sbjct: 210 VASSLADMYGKCGVLDDASKVFD-------------------------------EIPDRN 238
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
V+W +++VGY +NG E A+ +F DM + ++ + L A A++ + GK H+
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA 298
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE 422
I G++ +G SL+N Y K G +E + + F + EKD+V+WN ++ + G +
Sbjct: 299 IAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVED 358
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSH-----LGLIDEGFAFFRSMSSEFGLSHGMDH 477
A+ + + M +K D VT ++ + LG + + S S+ L+
Sbjct: 359 AIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLA----- 413
Query: 478 VACMVDMLGRGGYVAEAQSL 497
+ ++DM + G + +A+ +
Sbjct: 414 -STVMDMYAKCGSIVDAKKV 432
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 144/336 (42%), Gaps = 71/336 (21%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSL 61
HS S + ++ + A+ G I A+K+FD ++D + WN ++ AY+ GL ++L L
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRL 463
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK 121
F M++ P+ +++ L+++S R N +D
Sbjct: 464 FYGMQLEGVPPNVITWN--------------------LIILSLLR------NGQVD---- 493
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGH 181
+A+ +F +M S + P I+W TM+ G
Sbjct: 494 -----EAKDMFLQMQSSGII-------------------------PNL--ISWTTMMNGM 521
Query: 182 ARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS-GWSSA 240
+ G E + ++M ES +P+ ++ + ++AC + G +HG++I++ SS
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSL 581
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ--- 297
+ ++ S++ YAK + A ++F S NA+I A+ G+ ++A ++
Sbjct: 582 VSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEG 641
Query: 298 ---APDKNIVSWTSMIVGYTRNGNGELALSMFLDMT 330
PD ++ T+++ G+ A+ +F D+
Sbjct: 642 VGLKPDN--ITITNVLSACNHAGDINQAIEIFTDIV 675
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 233/463 (50%), Gaps = 10/463 (2%)
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCES--LYQPDQWTFSALMNACTESRDMLYGCMVHG 230
A N+MI H + E ++ + S +PD +T + L+ ACT R G VHG
Sbjct: 73 ALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHG 132
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQK 290
I+ G+ + V+ ++S YA+L C ++FNS + V A++ A + GD
Sbjct: 133 MTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVF 192
Query: 291 AFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACAS 350
A F+ P+++ ++W +MI GY + G AL++F M ++++ + +VL AC
Sbjct: 193 ARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQ 252
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSM 410
L L G+ HS I R + + + +LV++YAKCGD+E + F G+ EK++ +W+S
Sbjct: 253 LGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSA 312
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFG 470
L ++G + + LF M GV P+ VTF +L CS +G +DEG F SM +EFG
Sbjct: 313 LNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFG 372
Query: 471 LSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSS 530
+ ++H C+VD+ R G + +A S+ ++ A + LL A + +L G
Sbjct: 373 IEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAV--WSSLLHASRMYKNLELGVL 430
Query: 531 VGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVT 590
+ + LE YV+LSN+Y S W VR+ M +GV+K PG S +E+ V
Sbjct: 431 ASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVH 490
Query: 591 AFVSGNNSSPYMADISNILYFLEIEMR------HTRPINFDID 627
F G+ S P I + + +R T P+ FDID
Sbjct: 491 EFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDID 533
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 178/405 (43%), Gaps = 37/405 (9%)
Query: 14 KIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS--K 71
K V+L+ + +A ++ D A N+MI A+ + ++S + + S + K
Sbjct: 46 KAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLK 105
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD+++ + + AC G G +H + + G+ + V LI +Y + KV
Sbjct: 106 PDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKV 165
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F+ + + V +++ A A A ++F MPER IAWN MI+G+A+ GE L
Sbjct: 166 FNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREAL 225
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
+F M + + ++++ACT+ + G H ++ ++ + + +++ Y
Sbjct: 226 NVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLY 285
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
A K GD +KA F +KN+ +W+S +
Sbjct: 286 A-------------------------------KCGDMEKAMEVFWGMEEKNVYTWSSALN 314
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR--GL 369
G NG GE L +F M ++ + + + +VL C+ + + G+ H +R G+
Sbjct: 315 GLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGI 373
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFA 413
+ L LV++YA+ G LE + + ++ W+S+L A
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 134/314 (42%), Gaps = 64/314 (20%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ + + AR G + ARKLF+ MP+RD +AWNAMI+ Y+ +G +++L++F M++ K
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVK 237
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
+ + + LSAC G H+ + + + ++ +A +L+D+Y KC D K
Sbjct: 238 VNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC---GDMEK- 293
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
A+EVF M E+ W++ + G A G E CL
Sbjct: 294 ---------------------------AMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
LF M + P+ TF ++ L GC V GFV
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSV----------LRGCSVVGFVD------------------ 358
Query: 252 AKLECPSDAMEMFNSFGAFNQVS-WNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSM 309
E M N FG Q+ + ++D + + G + A QQ P K + W+S+
Sbjct: 359 ---EGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 310 IVGYTRNGNGELAL 323
+ N EL +
Sbjct: 416 LHASRMYKNLELGV 429
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 170/560 (30%), Positives = 268/560 (47%), Gaps = 45/560 (8%)
Query: 37 RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVI 96
D WNA+I ++SH +Q+L L M + D FS S L AC+ G I
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
H + +G S L + N LI +Y KC +R++FD M + V++ S++ Y L
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 157 GMALEVFRSMPERVE--IAWNTMIAGHARRGE-VEACLGLFKEMCESLYQPDQWTFSALM 213
A E+F MP ++ I+WN+MI+G+A+ + V+ LF +M E
Sbjct: 204 VSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPE-------------- 249
Query: 214 NACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV 273
+D++ W NS++ Y K DA +F+ + V
Sbjct: 250 ------KDLI------------SW-------NSMIDGYVKHGRIEDAKGLFDVMPRRDVV 284
Query: 274 SWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
+W +ID + KLG A F Q P +++V++ SM+ GY +N AL +F DM + S
Sbjct: 285 TWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKES 344
Query: 334 IQL-DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGS 392
L D+ VL A A L L+ +H I+ + +G +L++MY+KCG ++ +
Sbjct: 345 HLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHA 404
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
L F GI K + WN+M+ +HG A + ++ +KPD++TF G+L CSH
Sbjct: 405 MLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHS 464
Query: 453 GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSY 512
GL+ EG F M + + + H CMVD+L R G + A++L ++ +
Sbjct: 465 GLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI--W 522
Query: 513 EVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQ 572
L AC H + TG V ++L YV+LSN+Y + G WK+ VR M ++
Sbjct: 523 RTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKER 582
Query: 573 GVKKVPGSSWIEIRNVVTAF 592
++K+PG SWIE+ V F
Sbjct: 583 KIEKIPGCSWIELDGRVHEF 602
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 177/394 (44%), Gaps = 39/394 (9%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
+R++FD MP RDSV++N+MI Y GL + LF M + + S+++ +S A
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMK--NLISWNSMISGYAQ 232
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
S G I + + L NS+ID Y K + DA+ +FD M + VTW ++
Sbjct: 233 TSD---GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATM 289
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM-CESLYQPD 205
+ YA A +F MP R +A+N+M+AG+ + L +F +M ES PD
Sbjct: 290 IDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPD 349
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
T ++ A + + +H ++++ FY +
Sbjct: 350 DTTLVIVLPAIAQLGRLSKAIDMHLYIVEK-------------QFY-----------LGG 385
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
G A+ID + K G Q A L F+ +K+I W +MI G +G GE A M
Sbjct: 386 KLGV-------ALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM 438
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVNMYA 384
L + R S++ D++ VL+AC+ ++ G + + R+ ++ L +V++ +
Sbjct: 439 LLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILS 498
Query: 385 KCGDLE-GSALAFCGILEKDLVSWNSMLFAFGLH 417
+ G +E L +E + V W + L A H
Sbjct: 499 RSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHH 532
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 23/219 (10%)
Query: 212 LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
++ +C S D+ +HG +IK+G + I+ +A P A F ++
Sbjct: 18 VLGSCKTSDDV---NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 74
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR 331
S++ G+ + FL W ++I ++ + AL + M
Sbjct: 75 VCSFS--------FGEVEDPFL------------WNAVIKSHSHGKDPRQALLLLCLMLE 114
Query: 332 NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEG 391
N + +D VL AC+ L + G +H + + GL LF+ N L+ +Y KCG L
Sbjct: 115 NGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL 174
Query: 392 SALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
S F + ++D VS+NSM+ + G A LF M
Sbjct: 175 SRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM 213
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 181/650 (27%), Positives = 283/650 (43%), Gaps = 113/650 (17%)
Query: 16 VSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK--PD 73
V+ A G I +ARKLF+EMP +++N +I Y GLY ++S+F M K PD
Sbjct: 57 VTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPD 116
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
++Y A G V+H ++ S + V N+L+ MY K AR VFD
Sbjct: 117 GYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL 193
M + + ++W NTMI+G+ R G + L +
Sbjct: 177 VMKNRDVISW-------------------------------NTMISGYYRNGYMNDALMM 205
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
F M D T +++ C +D+ G VH V + +EVKN++++ Y K
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK 265
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF--------------------- 292
+A +F+ + ++W +I+ + + GD + A
Sbjct: 266 CGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASL 325
Query: 293 ------------------LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR-NS 333
A +Q +I+ TS+I Y + +L +F ++ ++
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 334 IQLDNLVAGAVLHACASLAI------------------------------LAHGKMVHSC 363
++AG V + S A+ L +H
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE----KDLVSWNSMLFAFGLHGR 419
+ + G L LV++Y+KCG LE + F GI E KD+V W +++ +G+HG
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 420 ANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVA 479
+ A+ +F EMV SGV P+E+TFT L CSH GL++EG FR M + +H
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 480 CMVDMLGRGGYVAEAQSLAK--KYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKT 537
C+VD+LGR G + EA +L + TS + LL AC H ++ G L
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIPFEPTSTV----WGALLAACVTHENVQLGEMAANKLFE 621
Query: 538 LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRN 587
LEPE YV+L+N+Y A G+WK+ E VR M + G++K PG S IEIR+
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 33/316 (10%)
Query: 145 SLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ- 203
+L YA A ++F MP+ +++N +I + R G + +F M +
Sbjct: 54 TLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKC 113
Query: 204 -PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAME 262
PD +T+ + A E + M G +VHG +++S + V+N++L+ Y
Sbjct: 114 VPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMY----------- 162
Query: 263 MFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELA 322
M G + A F +++++SW +MI GY RNG A
Sbjct: 163 --------------------MNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 323 LSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
L MF M S+ LD+ ++L C L L G+ VH + + L + V N+LVNM
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
Y KCG ++ + F + +D+++W M+ + G A+ L R M GV+P+ VT
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 443 TGMLMTCSHLGLIDEG 458
++ C +++G
Sbjct: 323 ASLVSVCGDALKVNDG 338
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 245 bits (626), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 206/383 (53%), Gaps = 38/383 (9%)
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
D+ G +H VI+SG+ S + V+NS+L YA
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-------------------------- 36
Query: 281 AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
GD A+ F + P+K++V+W S+I G+ NG E AL+++ +M I+ D
Sbjct: 37 -----GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFT 91
Query: 341 AGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL 400
++L ACA + L GK VH +I+ GL + L N L+++YA+CG +E + F ++
Sbjct: 92 IVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMV 151
Query: 401 EKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS-GVKPDEVTFTGMLMTCSHLGLIDEGF 459
+K+ VSW S++ ++G EA+ LF+ M ++ G+ P E+TF G+L CSH G++ EGF
Sbjct: 152 DKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 460 AFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS--YEVLLG 517
+FR M E+ + ++H CMVD+L R G V +A +Y K+ + N + LLG
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY----EYIKSMPMQPNVVIWRTLLG 267
Query: 518 ACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV 577
AC HGD + LEP YV+LSN+Y + +W + + +RK+ML GVKKV
Sbjct: 268 ACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKV 327
Query: 578 PGSSWIEIRNVVTAFVSGNNSSP 600
PG S +E+ N V F+ G+ S P
Sbjct: 328 PGHSLVEVGNRVHEFLMGDKSHP 350
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 141/318 (44%), Gaps = 61/318 (19%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S ++ S + A G + A K+FD+MP++D VAWN++I ++ G +++L+L+ M
Sbjct: 21 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 80
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
KPD F+ + LSACA G +H ++ G +L +N L+D+Y +C +
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
+A+ +FDEM D N V+W SL+ A + A+E+F+ M
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM------------------- 181
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
E+ GL P + TF ++ AC+ H ++K G+
Sbjct: 182 --ESTEGLL---------PCEITFVGILYACS-----------HCGMVKEGF-------- 211
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP-DKNIV 304
++ ++ FG ++D + G +KA+ + P N+V
Sbjct: 212 ---EYFRRMREEYKIEPRIEHFG--------CMVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 305 SWTSMIVGYTRNGNGELA 322
W +++ T +G+ +LA
Sbjct: 261 IWRTLLGACTVHGDSDLA 278
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 145/340 (42%), Gaps = 75/340 (22%)
Query: 92 FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYA 151
G IH++V+ SG+ S + V NSL+ +Y C A KVFD+M + + V W
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW-------- 57
Query: 152 NSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSA 211
N++I G A G+ E L L+ EM +PD +T +
Sbjct: 58 -----------------------NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVS 94
Query: 212 LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
L++AC + + G VH ++IK G + + N +L YA+ +A +F+ N
Sbjct: 95 LLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 154
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF--LDM 329
V SWTS+IVG NG G+ A+ +F ++
Sbjct: 155 SV-------------------------------SWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 330 TRNSIQLDNLVAGAVLHACASLAILAHG-----KMVHSCIIRRGLDKYLFVGNSLVNMYA 384
T + + G +L+AC+ ++ G +M I ++ + +V++ A
Sbjct: 184 TEGLLPCEITFVG-ILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF----GCMVDLLA 238
Query: 385 KCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEA 423
+ G ++ + + ++ ++V W ++L A +HG ++ A
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 260/576 (45%), Gaps = 64/576 (11%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N++I + + L+ ++L LF S+R F++ L AC S G +H+LVV
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
G+ + SL+ +Y + +DA K+FDE+
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI-------------------------- 172
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
P+R + W + +G+ G + LFK+M E +PD + +++AC D
Sbjct: 173 -----PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGD 227
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
+ G +++K + ME++ NSF +++
Sbjct: 228 LDSG----EWIVK--YMEEMEMQK-------------------NSFVR------TTLVNL 256
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
+ K G +KA F +K+IV+W++MI GY N + + +FL M + +++ D
Sbjct: 257 YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSI 316
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE 401
L +CASL L G+ S I R LF+ N+L++MYAKCG + F + E
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
KD+V N+ + +G + +F + G+ PD TF G+L C H GLI +G F
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 462 FRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHA 521
F ++S + L ++H CMVD+ GR G + +A L A + LL C
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIV--WGALLSGCRL 494
Query: 522 HGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSS 581
D +V + L LEP YV LSN+Y G+W EA VR M +G+KK+PG S
Sbjct: 495 VKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYS 554
Query: 582 WIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
WIE+ V F++ + S P I L L EMR
Sbjct: 555 WIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMR 590
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 182/427 (42%), Gaps = 72/427 (16%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS + + SGR+ A KLFDE+PDR V W A+ + Y+ G +++++ LF M K
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PDS+ LSAC G I + + + V +L+++Y KC K AR V
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD M + + VTW +++ YA++S +E
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIE------------------------------ 299
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
LF +M + +PDQ++ +++C + G W ++ ++ L+
Sbjct: 300 -LFLQMLQENLKPDQFSIVGFLSSCASLGALDLG----------EWGISLIDRHEFLT-- 346
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
N F A NA+ID + K G + F F++ +K+IV + I
Sbjct: 347 -------------NLFMA------NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAIS 387
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH---SCI--IR 366
G +NG+ +L+ ++F + I D +L C ++ G SC+ ++
Sbjct: 388 GLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMC 425
R ++ Y +V+++ + G L+ + C + + + + W ++L L A
Sbjct: 448 RTVEHY----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAET 503
Query: 426 LFREMVA 432
+ +E++A
Sbjct: 504 VLKELIA 510
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N ++ + T+ ++L F NI + S+I G+ N L +FL + ++ +
Sbjct: 49 NLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLY 108
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
L VL AC + G +HS +++ G + + SL+++Y+ G L +
Sbjct: 109 LHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKL 168
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
F I ++ +V+W ++ + GR EA+ LF++MV GVKPD +L C H+G +
Sbjct: 169 FDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDL 228
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
D G + M E + +V++ + G + +A+S+
Sbjct: 229 DSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 134/344 (38%), Gaps = 69/344 (20%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
M+ F T+ + A+ G++ AR +FD M ++D V W+ MI Y+ ++ + LF
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
M N KPD FS LS+CA G +L+ + ++L +AN+LIDMY KC
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC- 361
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
EVF+ M E+ + N I+G A+
Sbjct: 362 ------------------------------GAMARGFEVFKEMKEKDIVIMNAAISGLAK 391
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G V+ +F + + PD TF L+ C VH +I+ G
Sbjct: 392 NGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC-----------VHAGLIQDG------- 433
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK-N 302
L F+ + C +G ++D + G A+ P + N
Sbjct: 434 ----LRFFNAISCVYALKRTVEHYG--------CMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTR-------NSIQLDNL 339
+ W +++ G + +LA ++ ++ N +QL N+
Sbjct: 482 AIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNI 525
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/640 (26%), Positives = 285/640 (44%), Gaps = 101/640 (15%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F T+ + A+ G + A ++F +P+ V+W M++ Y+ +L +F MR
Sbjct: 285 VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRH 344
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
S + ++ + ++ +SAC S S +HA V SG+ VA +LI MY K
Sbjct: 345 SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDL 404
Query: 128 ARKVFDEMAD------------------------------------SNEVTWCSLLFAY- 150
+ +VF+++ D ++E + CSLL
Sbjct: 405 SEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLD 464
Query: 151 ----------------------ANSSLFGM---------ALEVFRSMPERVEIAWNTMIA 179
SSLF + + ++F+ +P + W +MI+
Sbjct: 465 CLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMIS 524
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSS 239
G G + +GLF EM + PD+ T +A++ C+ + G +HG+ +++G
Sbjct: 525 GFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDK 584
Query: 240 AMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
M++ +++++ Y+K A ++++ + VS +++I + + G Q FL
Sbjct: 585 GMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL------ 638
Query: 300 DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
+F DM + +D+ ++L A A + G
Sbjct: 639 -------------------------LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQ 673
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGR 419
VH+ I + GL VG+SL+ MY+K G ++ AF I DL++W +++ ++ HG+
Sbjct: 674 VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGK 733
Query: 420 ANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVA 479
ANEA+ ++ M G KPD+VTF G+L CSH GL++E + SM ++G+ H
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 480 CMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLE 539
CMVD LGR G + EA+S A + LL AC HG++ G + LE
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALV--WGTLLAACKIHGEVELGKVAAKKAIELE 851
Query: 540 PEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPG 579
P Y+ LSN+ G+W E E RK M GV+K PG
Sbjct: 852 PSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 152/607 (25%), Positives = 253/607 (41%), Gaps = 106/607 (17%)
Query: 2 HSMRSYL-----FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQ 56
H +R YL F T S + + SG + A KLFD +P D V+ N MI+ Y L++
Sbjct: 73 HLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFE 132
Query: 57 QSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLI 116
+SL F M + + SY + +SAC+ F ++ + GY V ++LI
Sbjct: 133 ESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALI 192
Query: 117 DMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNT 176
D++ K L+ DA KVF + +N +C WNT
Sbjct: 193 DVFSKNLRFEDAYKVFRDSLSAN--VYC-----------------------------WNT 221
Query: 177 MIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG 236
+IAG R A LF EMC +PD +T+S+++ AC + +G +V VIK G
Sbjct: 222 IIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG 281
Query: 237 WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQ 296
V +I+ YAK ++AME+F+ + VSW
Sbjct: 282 AEDVF-VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW--------------------- 319
Query: 297 QAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAH 356
T M+ GYT++ + AL +F +M + ++++N +V+ AC +++
Sbjct: 320 ----------TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF---CGILEKDLVSWNSMLFA 413
VH+ + + G V +L++MY+K GD++ S F I +++V N M+ +
Sbjct: 370 ASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITS 427
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGML--MTCSHLGLIDEGFAFFR-------- 463
F + +A+ LF M+ G++ DE + +L + C +LG G+
Sbjct: 428 FSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 464 ------------SMSSEFGLSHGMDHV-----ACMVDMLGRGGYVAEAQSL-AKKYSKTS 505
S+ + L G+ A M+ GY+ EA L ++ +
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 506 GARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVM---LSNLYCASGQWKEA 562
++ +L C +H L G + Y TL + G + L N+Y G K A
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGY--TLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 563 EIVRKEM 569
V +
Sbjct: 606 RQVYDRL 612
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/472 (32%), Positives = 238/472 (50%), Gaps = 10/472 (2%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM-CESL-YQ 203
L F A+ S A VF + + WNT+I G +R E + +F +M C S +
Sbjct: 64 LAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVK 123
Query: 204 PDQWTFSALMNA---CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
P + T+ ++ A ++RD G +HG VIK G ++N++L Y C +A
Sbjct: 124 PQRLTYPSVFKAYGRLGQARD---GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEA 180
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
+F F+ V+WN++I K G +A F + P +N VSW SMI G+ RNG +
Sbjct: 181 WRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFK 240
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
AL MF +M ++ D ++L+ACA L G+ +H I+R + V +L+
Sbjct: 241 DALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALI 300
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+MY KCG +E F +K L WNSM+ +G AM LF E+ SG++PD V
Sbjct: 301 DMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSV 360
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
+F G+L C+H G + FFR M ++ + + H MV++LG G + EA++L K
Sbjct: 361 SFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKN 420
Query: 501 YSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWK 560
T + LL AC G++ + LK L+P++ GYV+LSN Y + G ++
Sbjct: 421 MPVEED--TVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFE 478
Query: 561 EAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFL 612
EA R M ++ ++K G S IE+ V F+S + P A+I ++L L
Sbjct: 479 EAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 185/415 (44%), Gaps = 49/415 (11%)
Query: 11 TTSKIVSL--ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
T S++++ A + +A +F + ++ WN +I +S + ++S+F M S
Sbjct: 59 TASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCS 118
Query: 69 NS--KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
+ KP +Y + A G +H +V+ G + N+++ MY C
Sbjct: 119 SPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLI 178
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
+A ++F M + V W S++ +A L A +F MP+R ++WN+MI+G R G
Sbjct: 179 EAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGR 238
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
+ L +F+EM E +PD +T +L+NAC G +H ++++
Sbjct: 239 FKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVR------------ 286
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
N F N + A+ID + K G ++ F+ AP K + W
Sbjct: 287 ------------------NRF-ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC--I 364
SMI+G NG E A+ +F ++ R+ ++ D++ VL AC AH VH
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC------AHSGEVHRADEF 381
Query: 365 IRRGLDKYLFVGNS-----LVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFA 413
R +KY+ + +VN+ G L E AL +E+D V W+S+L A
Sbjct: 382 FRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/591 (27%), Positives = 276/591 (46%), Gaps = 35/591 (5%)
Query: 29 KLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSYSAALSACAGG 87
KLFDE+P RD +WN ++++ G ++ LF M R+ DSF+ S LS+C
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 88 SHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLL 147
S G +H + G L V N+LI Y K +++ M + VT+ ++
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 148 FAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQW 207
AY + + A+E+F ++ E+ I +N ++AG R G L LF +M + + +
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
+ ++ ++AC + +HGF IK G + ++ ++L + E +DA EMF+
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ- 477
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF- 326
W + +D+ + TS+I GY RNG + A+S+F
Sbjct: 478 -------WPSNLDSSK---------------------ATTSIIGGYARNGLPDKAVSLFH 509
Query: 327 LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC 386
+ + LD + +L C +L G +H ++ G + +GNSL++MYAKC
Sbjct: 510 RTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKC 569
Query: 387 GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
D + + F + E D++SWNS++ + L +EA+ L+ M +KPD +T T ++
Sbjct: 570 CDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVI 629
Query: 447 MTCSHL--GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+ + F SM + + + +H V +LG G + EA+ S
Sbjct: 630 SAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTIN--SMP 687
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
+ LL +C H + V + + + +PE Y++ SN+Y ASG W +E+
Sbjct: 688 VQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEM 747
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIE 615
+R+EM ++G +K P SWI N + +F + + S P DI L L +E
Sbjct: 748 IREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIME 798
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 207/426 (48%), Gaps = 36/426 (8%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISN-SKPDSFSYSAALSACAGGSHHGFGSVIHA 98
V++ A+I+ +S L L ++L +F MR + +P+ +++ A L+AC S G IH
Sbjct: 146 VSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHG 205
Query: 99 LVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGM 158
L+V SG+ +S+ V+NSL+ +Y K D + ++V
Sbjct: 206 LIVKSGFLNSVFVSNSLMSLYDK-----------DSGSSCDDV----------------- 237
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL-YQPDQWTFSALMNACT 217
L++F +P+R +WNT+++ + G+ LF EM + D +T S L+++CT
Sbjct: 238 -LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
+S +L G +HG I+ G + V N+++ FY+K ++ A + V++
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTE 356
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD 337
+I A+M G A F +KN +++ +++ G+ RNG+G AL +F DM + ++L
Sbjct: 357 MITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC---GDLEGSAL 394
+ + + AC ++ + +H I+ G + +L++M +C D E
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD 476
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF-REMVASGVKPDEVTFTGMLMTCSHLG 453
+ L+ + S++ + +G ++A+ LF R + + DEV+ T +L C LG
Sbjct: 477 QWPSNLDSSKAT-TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLG 535
Query: 454 LIDEGF 459
+ G+
Sbjct: 536 FREMGY 541
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 153/327 (46%), Gaps = 40/327 (12%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T I + G + A ++F + +++++ +NA++ + G ++L LF M +
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
FS ++A+ AC S IH + G + + +L+DM +C + DA ++
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD+ W S L +SS A ++I G+AR G + +
Sbjct: 475 FDQ--------WPSNL----DSSK-----------------ATTSIIGGYARNGLPDKAV 505
Query: 192 GLF-KEMCESLYQPDQWTFSALMNACTE--SRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
LF + +CE D+ + + ++ C R+M G +H + +K+G+ S + + NS++
Sbjct: 506 SLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREM--GYQIHCYALKAGYFSDISLGNSLI 563
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIV 304
S YAK DA+++FN+ + +SWN++I ++ + +A + + +K +I+
Sbjct: 564 SMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDII 623
Query: 305 SWTSMIVGYTRNGNGELA--LSMFLDM 329
+ T +I + + +L+ +FL M
Sbjct: 624 TLTLVISAFRYTESNKLSSCRDLFLSM 650
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS-I 334
NA+I ++KLG ++A L F +VS+T++I G++R AL +F M + +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK-----CGDL 389
Q + A+L AC ++ + G +H I++ G +FV NSL+++Y K C D+
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 390 EGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM-VASGVKPDEVTFTGMLMT 448
F I ++D+ SWN+++ + G++++A LF EM G D T + +L +
Sbjct: 238 LK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 449 CSHLGLIDEG 458
C+ ++ G
Sbjct: 295 CTDSSVLLRG 304
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/575 (28%), Positives = 263/575 (45%), Gaps = 78/575 (13%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS + ++ G + A +LF + DRD V+W+AMI +Y G + +++SLF M + K
Sbjct: 339 TSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIK 398
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P++ + ++ L CAG + G IH + + S L A ++I MY KC +
Sbjct: 399 PNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGR------- 451
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F AL+ F +P + +A+N + G+ + G+
Sbjct: 452 ------------------------FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAF 487
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
++K M PD T ++ C D G V+G +IK G+ S V +++++ +
Sbjct: 488 DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMF 547
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
K + + A+ +F+ G +K+ VSW M+
Sbjct: 548 TKCDALAAAIVLFDKCGF------------------------------EKSTVSWNIMMN 577
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY +G E A++ F M Q + + ++ A A L+ L G VHS +I+ G
Sbjct: 578 GYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCS 637
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
VGNSLV+MYAKCG +E S F I K +VSWN+ML A+ HG A+ A+ LF M
Sbjct: 638 QTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQ 697
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
+ +KPD V+F +L C H GL++EG F M + ++H ACMVD+LG+ G
Sbjct: 698 ENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLF 757
Query: 492 AEAQSLAKKYS-KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLS 550
EA + ++ KTS + LL + H +L ++ L LEP +
Sbjct: 758 GEAVEMMRRMRVKTS---VGVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNP 807
Query: 551 NLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEI 585
+ Y + E V + +KKVP SWIE+
Sbjct: 808 SHYSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 200/426 (46%), Gaps = 67/426 (15%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS-KPDSFSYSAALSACA 85
+R +FD + D V WN+MI Y+ GL++++L FG M PD +S++ AL ACA
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G G IH L+ G S + + +L++MY K AR+VFD+M + VT
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT--- 168
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
WNTM++G A+ G A L LF +M D
Sbjct: 169 ----------------------------WNTMVSGLAQNGCSSAALLLFHDMRSCCVDID 200
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+ L+ A ++ +HG VIK G+ I +F + L
Sbjct: 201 HVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF---------IFAFSSGL----------- 240
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
ID + D A F++ K+ SW +M+ Y NG E L +
Sbjct: 241 -------------IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLEL 287
Query: 326 FLDMTRN-SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
F D+ RN ++++ + A + L A A + L G +H +++GL + V SL++MY+
Sbjct: 288 F-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYS 346
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
KCG+LE + F I ++D+VSW++M+ ++ G+ +EA+ LFR+M+ +KP+ VT T
Sbjct: 347 KCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTS 406
Query: 445 MLMTCS 450
+L C+
Sbjct: 407 VLQGCA 412
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 127/522 (24%), Positives = 229/522 (43%), Gaps = 70/522 (13%)
Query: 5 RSYLFQTTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+ ++F +S ++ + + A +F+E+ +D +W M+ AY+H G +++ L LF
Sbjct: 230 KGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
MR + + + + ++AL A A G IH V G + VA SL+ MY KC
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
+ A ++F + D + V+W +++ +Y +
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQA------------------------------ 379
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G+ + + LF++M +P+ T ++++ C G +H + IK+ S +E
Sbjct: 380 -GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
+++S YAK S A++ F + V++NA+ + ++GD KAF
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAF----------- 487
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
++ +M + + D+ +L CA + A G V+
Sbjct: 488 --------------------DVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQ 527
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF--CGILEKDLVSWNSMLFAFGLHGRAN 421
II+ G D V ++L+NM+ KC L + + F CG EK VSWN M+ + LHG+A
Sbjct: 528 IIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG-FEKSTVSWNIMMNGYLLHGQAE 586
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACM 481
EA+ FR+M +P+ VTF ++ + L + G + S+ + G +
Sbjct: 587 EAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL-IQCGFCSQTPVGNSL 645
Query: 482 VDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
VDM + G + +S K + + S S+ +L A AHG
Sbjct: 646 VDMYAKCGMI---ESSEKCFIEISNKYIVSWNTMLSAYAAHG 684
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 227/526 (43%), Gaps = 79/526 (15%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+ S ++ T+ + ++ + AR++FD+M +D V WN M++ + G +L LF
Sbjct: 131 LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
MR D S + A + +H LV+ G+ ++ LIDMY C
Sbjct: 191 DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCA 248
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
+ A VF+E+ +E +W +++ AYA++ F LE+F M R
Sbjct: 249 DLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM----------------R 292
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
+V + ++ ++ + A D++ G +H + ++ G + V
Sbjct: 293 NYDV---------------RMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
S++S Y+K A ++F + + VSW+A
Sbjct: 338 ATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSA-------------------------- 371
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
MI Y + G + A+S+F DM R I+ + + +VL CA +A GK +H
Sbjct: 372 -----MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
I+ ++ L ++++MYAKCG + AF + KD V++N++ + G AN+A
Sbjct: 427 AIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKA 486
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD---HVA- 479
+++ M GV PD T GML TC+ G + + + HG D HVA
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQI-----IKHGFDSECHVAH 541
Query: 480 CMVDMLGRGGYVAEAQSLAKK--YSKTSGARTNSYEVLLGACHAHG 523
+++M + +A A L K + K+ T S+ +++ HG
Sbjct: 542 ALINMFTKCDALAAAIVLFDKCGFEKS----TVSWNIMMNGYLLHG 583
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 56/359 (15%)
Query: 105 YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFR 164
+R L V SLI + G LKPH+ L+ AY+ ++ +F
Sbjct: 18 FRCLLQVHGSLI-VSG--LKPHN-----------------QLINAYSLFQRQDLSRVIFD 57
Query: 165 SMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL-YQPDQWTFSALMNACTESRDML 223
S+ + + WN+MI G+ R G LG F M E PD+++F+ + AC S D
Sbjct: 58 SVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFK 117
Query: 224 YGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHM 283
G +H + + G S + + +++ Y K
Sbjct: 118 KGLRIHDLIAEMGLESDVYIGTALVEMYCKAR---------------------------- 149
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
D A F + K++V+W +M+ G +NG AL +F DM + +D++
Sbjct: 150 ---DLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYN 206
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS-LVNMYAKCGDLEGSALAFCGILEK 402
++ A + L + +H +I++G ++F +S L++MY C DL + F + K
Sbjct: 207 LIPAVSKLEKSDVCRCLHGLVIKKG---FIFAFSSGLIDMYCNCADLYAAESVFEEVWRK 263
Query: 403 DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
D SW +M+ A+ +G E + LF M V+ ++V L +++G + +G A
Sbjct: 264 DESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 220/418 (52%), Gaps = 44/418 (10%)
Query: 203 QPDQWTF-----SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
+ D W+F S+ + +C +RD G H +K G+ S + + +S++ Y
Sbjct: 112 KRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS--- 168
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
G+ + A+ F++ P++N+VSWT+MI G+ +
Sbjct: 169 ----------------------------GEVENAYKVFEEMPERNVVSWTAMISGFAQEW 200
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
++ L ++ M +++ ++ A+L AC L G+ VH + GL YL + N
Sbjct: 201 RVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA-SGVK 436
SL++MY KCGDL+ + F KD+VSWNSM+ + HG A +A+ LF M+ SG K
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTK 320
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQS 496
PD +T+ G+L +C H GL+ EG FF M +E GL ++H +C+VD+LGR G + EA
Sbjct: 321 PDAITYLGVLSSCRHAGLVKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFGLLQEALE 379
Query: 497 LAKKYSKTSGARTNS--YEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYC 554
L + + NS + LL +C HGD+ TG E LEP+ +V L+NLY
Sbjct: 380 LIENMP----MKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYA 435
Query: 555 ASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFL 612
+ G WKEA VRK M D+G+K PG SWIEI N V F + + S+ M +I ++L+ L
Sbjct: 436 SVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCL 493
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 152/348 (43%), Gaps = 64/348 (18%)
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
D++ S+A+ +C GS H L + G+ S + + +SL+ +Y
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLY------------- 165
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
DS EV A +VF MPER ++W MI+G A+ V+ CL
Sbjct: 166 ---RDSGEVE---------------NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 193 LFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
L+ +M +S P+ +TF+AL++ACT S + G VH + G S + + NS++S Y
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVG 312
K DA +F+ F + VSWN SMI G
Sbjct: 268 KCGDLKDAFRIFDQFSNKDVVSWN-------------------------------SMIAG 296
Query: 313 YTRNGNGELALSMF-LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
Y ++G A+ +F L M ++ + D + VL +C ++ G+ + + GL
Sbjct: 297 YAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKP 356
Query: 372 YLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFGLHG 418
L + LV++ + G L E L ++ + V W S+LF+ +HG
Sbjct: 357 ELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 5/214 (2%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S ++ +S +V SG + +A K+F+EMP+R+ V+W AMI+ ++ L L+ M
Sbjct: 153 SDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM 212
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R S S P+ ++++A LSAC G G G +H + G +S L ++NSLI MY KC
Sbjct: 213 RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV-----EIAWNTMIAG 180
DA ++FD+ ++ + V+W S++ YA L A+E+F M + I + +++
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMN 214
G V+ F M E +P+ +S L++
Sbjct: 333 CRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVD 366
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
++SYL + S I + G + A ++FD+ ++D V+WN+MI Y+ GL Q++ LF
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 64 -SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
M S +KPD+ +Y LS+C G L+ G + L + L+D+ G+
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Query: 123 LKPHDARKVFDEMA-DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGH 181
+A ++ + M N V W SLLF+ + G R+ ER+ + + A H
Sbjct: 372 GLLQEALELIENMPMKPNSVIWGSLLFS---CRVHGDVWTGIRAAEERLMLEPDCA-ATH 427
Query: 182 ARRGEVEACLGLFKE 196
+ + A +G +KE
Sbjct: 428 VQLANLYASVGYWKE 442
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGA-----VLHACASLAILAHGKMVHSCIIRRG 368
T+NG + + L+ + +S++ D A + +C G H ++ G
Sbjct: 91 TKNGVSSVLEEVMLEDSSSSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGG 150
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
+++G+SLV +Y G++E + F + E+++VSW +M+ F R + + L+
Sbjct: 151 FISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYS 210
Query: 429 EMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+M S P++ TFT +L C+ G + +G
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQG 240
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 230/461 (49%), Gaps = 35/461 (7%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM--CESLYQPDQWTFSALMNAC 216
A ++F MPER ++WN++I+G++ RG + C + M E ++P++ TF ++++AC
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 217 TESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWN 276
G +HG V+K G ++V N+ +++Y K + + ++F N VSWN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
+I H++ NG E L+ F R +
Sbjct: 205 TMIVIHLQ-------------------------------NGLAEKGLAYFNMSRRVGHEP 233
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
D AVL +C + ++ + +H I+ G + +L+++Y+K G LE S+ F
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
I D ++W +ML A+ HG +A+ F MV G+ PD VTFT +L CSH GL++
Sbjct: 294 HEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 457 EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLL 516
EG +F +MS + + +DH +CMVD+LGR G + +A L K+ + + LL
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPS--SGVWGALL 411
Query: 517 GACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKK 576
GAC + D G+ E L LEP YVMLSN+Y ASG WK+A +R M +G+ +
Sbjct: 412 GACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVR 471
Query: 577 VPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
G S+IE N + FV G+ S P I L + +M+
Sbjct: 472 ASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMK 512
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 159/374 (42%), Gaps = 65/374 (17%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS--KPDSFSY 77
R G A KLFDEMP+RD V+WN++I+ YS G + + M IS +P+ ++
Sbjct: 78 RLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTF 137
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ +SAC G G IH LV+ G + V N+ I+ YGK + K+F++++
Sbjct: 138 LSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI 197
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
N V+W NTMI H + G E L F
Sbjct: 198 KNLVSW-------------------------------NTMIVIHLQNGLAEKGLAYFNMS 226
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
++PDQ TF A++ +C + + +HG ++ G+S + ++L Y+KL
Sbjct: 227 RRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRL 286
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
D+ +F+ + + ++W T+M+ Y +G
Sbjct: 287 EDSSTVFHEITSPDSMAW-------------------------------TAMLAAYATHG 315
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVG 376
G A+ F M I D++ +L+AC+ ++ GK + +R +D L
Sbjct: 316 FGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY 375
Query: 377 NSLVNMYAKCGDLE 390
+ +V++ + G L+
Sbjct: 376 SCMVDLLGRSGLLQ 389
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI- 334
+ ++ +++LG A F + P++++VSW S+I GY+ G + M + +
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 335 -QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSA 393
+ + + +++ AC G+ +H +++ G+ + + V N+ +N Y K GDL S
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 394 LAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLG 453
F + K+LVSWN+M+ +G A + + F G +PD+ TF +L +C +G
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMG 249
Query: 454 LI 455
++
Sbjct: 250 VV 251
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 343 AVLHACASLAI--LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL 400
A + +C S+ + L H K+V S R G F+G+ LV Y + G + F +
Sbjct: 39 AAVKSCVSIELCRLLHCKVVKSVSYRHG-----FIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 401 EKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS--GVKPDEVTFTGMLMTCSHLGLIDEG 458
E+DLVSWNS++ + G + + M+ S G +P+EVTF M+ C + G +EG
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGG 489
+ +FG+ + V ++ G+ G
Sbjct: 154 RC-IHGLVMKFGVLEEVKVVNAFINWYGKTG 183
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 245/523 (46%), Gaps = 66/523 (12%)
Query: 76 SYSAALSAC--AGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
+Y+ L AC A HHG + ++ R + + + LI ++ C + ARK+FD
Sbjct: 133 AYTDLLHACISAKSLHHGI-KICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFD 191
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGL 193
++ DS+ +T E W M G++R G L +
Sbjct: 192 DVTDSSLLT----------------------------EKVWAAMAIGYSRNGSPRDALIV 223
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
+ +M S +P ++ S + AC + +D+ G +H ++K V N +L Y +
Sbjct: 224 YVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYME 283
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI-VSWTSMIVG 312
DA ++F+ N V+WN++I K + F F++ ++ I SW ++
Sbjct: 284 SGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLT-- 341
Query: 313 YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY 372
+L AC+ +A L GK +H+ I++
Sbjct: 342 ------------------------------TILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 373 LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
+ + NSL++MY KCG++E S F +L KDL SWN ML + ++G E + LF M+
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVA 492
SGV PD +TF +L CS GL + G + F M +EF +S ++H AC+VD+LGR G +
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 493 EAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNL 552
EA + + A + LL +C HG++ G + L LEP YVM+SN+
Sbjct: 492 EAVKVIETMPFKPSASI--WGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNI 549
Query: 553 YCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSG 595
Y + W + +R+ M +GVKK G SW+++++ + FV+G
Sbjct: 550 YADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 170/416 (40%), Gaps = 76/416 (18%)
Query: 13 SKIVSL-ARSGRICHARKLFDEMPDRDSVA---WNAMITAYSHLGLYQQSLSLFGSMRIS 68
SK+++L + R+ ARK+FD++ D + W AM YS G + +L ++ M S
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+P +FS S AL AC G IHA +V + V N L+ +Y + DA
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
RKVFD M++ N VTW N++I+ +++ V
Sbjct: 291 RKVFDGMSERNVVTW-------------------------------NSLISVLSKKVRVH 319
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
LF++M E + T + ++ AC+ +L G +H ++KS + + NS++
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
Y K G+ + + F K++ SW
Sbjct: 380 DMYG-------------------------------KCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-----KMVHSC 363
M+ Y NGN E +++F M + + D + A+L C+ + +G +M
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVS-WNSMLFAFGLHG 418
+ L+ Y LV++ + G ++ + + K S W S+L + LHG
Sbjct: 469 RVSPALEHY----ACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 175/639 (27%), Positives = 276/639 (43%), Gaps = 109/639 (17%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS---KPDSF 75
++ G + A +FDEMPDRD VAW A+I+ + G + L M + S KP+
Sbjct: 172 SKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPR 231
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
+ AC+ G +H V +G SS V +S+ Y K P +A F E+
Sbjct: 232 TLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
D + +W ++IA AR G++E +F
Sbjct: 292 GDEDM-------------------------------FSWTSIIASLARSGDMEESFDMFW 320
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF----- 250
EM PD S L+N + + G HGFVI+ +S V NS+LS
Sbjct: 321 EMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFE 380
Query: 251 ---------------------------YAKLECPSDAMEMF----------NSFGAFNQV 273
Y K++C +E+F +S A + +
Sbjct: 381 LLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVI 440
Query: 274 S-----------------------------WNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
S N++ID + K+GD A+ F +A D N++
Sbjct: 441 SSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVI 499
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
+W +MI Y E A+++F M + + ++ +L AC + L G+M+H I
Sbjct: 500 TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYI 559
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
+ L + +L++MYAKCG LE S F +KD V WN M+ +G+HG A+
Sbjct: 560 TETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAI 619
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
LF +M S VKP TF +L C+H GL+++G F M ++ + + H +C+VD+
Sbjct: 620 ALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDL 678
Query: 485 LGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEV 544
L R G + EA+S + + LL +C HG+ G + E +P+ +
Sbjct: 679 LSRSGNLEEAESTVMSMPFSPDGVI--WGTLLSSCMTHGEFEMGIRMAERAVASDPQNDG 736
Query: 545 GYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWI 583
Y+ML+N+Y A+G+W+EAE R+ M + GV K G S +
Sbjct: 737 YYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 151/606 (24%), Positives = 256/606 (42%), Gaps = 104/606 (17%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F + I S A G+ + ++F + RD WN++I A+ G Y +SL F SM +
Sbjct: 59 IFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLL 118
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVV-SGYRSSLPVANSLIDMYGKCLKPH 126
S PD F+ +SACA G+ +H LV+ G+ + V S + Y KC
Sbjct: 119 SGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQ 178
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
DA VF MP+R +AW +I+GH + GE
Sbjct: 179 DA-------------------------------CLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 187 VEACLGLFKEMCES---LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
E LG +M + + +P+ T AC+ + G +HGF +K+G +S+ V
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV 267
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
++S+ SFY+K PS+A +L+F++ D+++
Sbjct: 268 QSSMFSFYSKSGNPSEA-------------------------------YLSFRELGDEDM 296
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
SWTS+I R+G+ E + MF +M + D +V +++ + ++ GK H
Sbjct: 297 FSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK-DLVSWNSMLFAFGLHGRANE 422
+IR V NSL++MY K L + FC I E+ + +WN+ML +G +
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK 416
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMV 482
+ LFR++ G++ D + T ++ +CSH+G + G + + L + V ++
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS-LHCYVVKTSLDLTISVVNSLI 475
Query: 483 DMLGRGG-------------------------YVAEAQS------LAKKYSKTSGARTNS 511
D+ G+ G YV QS + S+ + +
Sbjct: 476 DLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSIT 535
Query: 512 YEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGY-VMLSNLYCASGQWKEAEIVRKEML 570
LL AC G L G + Y+ E E + L ++Y G +++ +E+
Sbjct: 536 LVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKS----RELF 591
Query: 571 DQGVKK 576
D G +K
Sbjct: 592 DAGNQK 597
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 145/343 (42%), Gaps = 36/343 (10%)
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
L+ H+A + +++ N L+ +YA+ ++ VF + R WN++I H
Sbjct: 43 LRKHNALIITGGLSE-NIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHF 101
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK-SGWSSAM 241
G+ L F M S PD +T +++AC E G VHG V+K G+
Sbjct: 102 SNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNT 161
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
V S + FY+K DA +F+ + V+W AII H++
Sbjct: 162 AVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQ----------------- 204
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV---LHACASLAILAHGK 358
NG E L M +D + AC++L L G+
Sbjct: 205 --------------NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGR 250
Query: 359 MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
+H ++ GL FV +S+ + Y+K G+ + L+F + ++D+ SW S++ + G
Sbjct: 251 CLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSG 310
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
E+ +F EM G+ PD V + ++ + L+ +G AF
Sbjct: 311 DMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAF 353
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 274/585 (46%), Gaps = 51/585 (8%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F T+ + + ++ A K+ DEMP+R + NA ++ G + + +FG R+
Sbjct: 66 VFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARV 125
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
S S +S + ++ L C G G G +H L + SG+ + V SL+ MY +C +
Sbjct: 126 SGSGMNSVTVASVLGGC--GDIEG-GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGE--- 179
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
W +A +F +P + + +N I+G G +
Sbjct: 180 ---------------WV-------------LAARMFEKVPHKSVVTYNAFISGLMENGVM 211
Query: 188 EACLGLFKEMCE-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
+F M + S +P+ TF + AC ++ YG +HG V+K + V +
Sbjct: 212 NLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTA 271
Query: 247 ILSFYAKLECPSDAMEMFNSF-GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ------AP 299
++ Y+K C A +F N +SWN++I M G + A F++ P
Sbjct: 272 LIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKP 331
Query: 300 DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
D +W S+I G+++ G A F M + ++L AC+ + L +GK
Sbjct: 332 DS--ATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE---KDLVSWNSMLFAFGL 416
+H +I+ ++ +FV SL++MY KCG L A E KD V WN M+ +G
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCG-LSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
HG A+ +F + V+P TFT +L CSH G +++G FR M E+G +
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 477 HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLK 536
H+ CM+D+LGR G + EA+ + + S+ S + +S LLG+C H D G L
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSS---LLGSCRQHLDPVLGEEAAMKLA 565
Query: 537 TLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSS 581
LEPE +V+LS++Y A +W++ E +R+ + + + K+PG S
Sbjct: 566 ELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 149/335 (44%), Gaps = 69/335 (20%)
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
+ P+++TF L+ +C + D++ G ++H V+K+G+ + +++S Y K++ +DA+
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDAL 86
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF----------------------------- 292
++ + S NA + ++ G + AF
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 293 -------LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN-----LV 340
LA + + + TS++ Y+R G LA MF + S+ N L+
Sbjct: 147 GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 341 AGAVLH---------------------------ACASLAILAHGKMVHSCIIRRGLDKYL 373
V++ ACASL L +G+ +H ++++
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILE-KDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
VG +L++MY+KC + + + F + + ++L+SWNS++ ++G+ A+ LF ++ +
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
G+KPD T+ ++ S LG + E F FF M S
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 243/483 (50%), Gaps = 14/483 (2%)
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
A ++S A + + + WN +I G + E + ++ +M PD T
Sbjct: 51 ALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMT 110
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
+ LM + + + G +H V+KSG + + N+++ Y + A ++F+
Sbjct: 111 YPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP 170
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
N V+WN+I+DA+ K GD A L F + ++++V+W+SMI GY + G AL +F
Sbjct: 171 HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQ 230
Query: 329 MTR-NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
M R S + + + +V+ ACA L L GK VH I+ L + + SL++MYAKCG
Sbjct: 231 MMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCG 290
Query: 388 DLEGSALAF--CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
+ + F + E D + WN+++ HG E++ LF +M S + PDE+TF +
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCL 350
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS-KT 504
L CSH GL+ E + FF+S+ E G +H ACMVD+L R G V +A + K
Sbjct: 351 LAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKP 409
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
+G+ + LL C HG+L +VG+ L L+P + YV L+N+Y + Q++ A
Sbjct: 410 TGSMLGA---LLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARS 466
Query: 565 VRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRHTRPINF 624
+R+ M +GVKK+ G S +++ F++ + + + I +L M N
Sbjct: 467 MREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWM------NL 520
Query: 625 DID 627
D+D
Sbjct: 521 DVD 523
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 145/300 (48%), Gaps = 4/300 (1%)
Query: 7 YLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR 66
++ QT S +L+ SG + +A K ++ D + WN +I +S+ ++S+S++ M
Sbjct: 42 FVSQTLS-FSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQML 100
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
PD +Y + + + S+ G +H VV SG L + N+LI MYG
Sbjct: 101 RFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQA 160
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
ARK+FDEM N VTW S+L AYA S A VF M ER + W++MI G+ +RGE
Sbjct: 161 SARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGE 220
Query: 187 VEACLGLFKEMCE-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
L +F +M + ++ T +++ AC + G VH +++ + ++
Sbjct: 221 YNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQT 280
Query: 246 SILSFYAKLECPSDAMEMF--NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
S++ YAK DA +F S + + WNAII G +++ F + + I
Sbjct: 281 SLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKI 340
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 235 bits (600), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 165/605 (27%), Positives = 279/605 (46%), Gaps = 78/605 (12%)
Query: 81 LSACAGGSHHGFGSVIHALVVVSGYRSSLPVA---NSLIDMYGKCLKPHDARKVFDEMAD 137
L CA S+ G IHA ++V+ S A NSLI++Y KC + ARK+FD M +
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPE 97
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
N V+WC+++ Y NS L++F+SM +G +R E A + +FK
Sbjct: 98 RNVVSWCAMMKGYQNSGFDFEVLKLFKSM----------FFSGESRPNEFVATV-VFKSC 146
Query: 198 CESLYQPDQWTFSA-LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
S + F + S + + +V+ + + SG A+ V + + Y L
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLP--YCDLSV 204
Query: 257 PSDAMEMFNSFGAFNQ------------VSWN---------------------------- 276
S A+ + GAF + WN
Sbjct: 205 FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMV 264
Query: 277 ------------AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALS 324
A+I+ + K G A F +NI T+++ Y ++ + E AL+
Sbjct: 265 RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALN 324
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
+F M + + +L++ A L++L G ++H +++ G ++ VGN+LVNMYA
Sbjct: 325 LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
K G +E + AF G+ +D+V+WN+M+ HG EA+ F M+ +G P+ +TF G
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+L CSH+G +++G +F + +F + + H C+V +L + G +A+ + +T
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAED----FMRT 500
Query: 505 SGARTN--SYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEA 562
+ + ++ LL AC+ + G V EY P YV+LSN++ S +W+
Sbjct: 501 APIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGV 560
Query: 563 EIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRHTRPI 622
VR M ++GVKK PG SWI IRN F++ +N P +I+ I ++ M +P+
Sbjct: 561 AKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHP---EITLIYAKVKEVMSKIKPL 617
Query: 623 NFDID 627
+ D
Sbjct: 618 GYSPD 622
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 182/483 (37%), Gaps = 114/483 (23%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
+Q S I + ARKLFD MP+R+ V+W AM+ Y + G + L LF SM S
Sbjct: 70 YQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFS 129
Query: 69 -NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
S+P+ F + +C+ G H + G S V N+L+ MY C +
Sbjct: 130 GESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGE 189
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTM---------- 177
A +V D++ + + S L Y F L+V R + WN +
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANE-DFVWNNLTYLSSLRLFS 248
Query: 178 --------IAGHAR------RGEVEAC--------------------------------- 190
+ H+R EVEAC
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 191 --------------LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG 236
L LF +M P+++TF+ L+N+ E + G ++HG V+KSG
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 237 WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQ 296
+ + + V N++++ YAK DA + F+ + V+WN
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWN-------------------- 408
Query: 297 QAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAH 356
+MI G + +G G AL F M + + VL AC+ + +
Sbjct: 409 -----------TMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQ 457
Query: 357 G-----KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSA-LAFCGILEKDLVSWNSM 410
G +++ ++ + Y +V + +K G + + +E D+V+W ++
Sbjct: 458 GLHYFNQLMKKFDVQPDIQHY----TCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Query: 411 LFA 413
L A
Sbjct: 514 LNA 516
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 344 VLHACASLAILAHGKMVHSCII-----RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
+L CA+ + L G+ +H+ +I R D Y NSL+N+Y KC + + F
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI--NSLINLYVKCRETVRARKLFDL 94
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG-VKPDEVTFTGMLMTCSHLGLIDE 457
+ E+++VSW +M+ + G E + LF+ M SG +P+E T + +CS+ G I+E
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 458 GFAF 461
G F
Sbjct: 155 GKQF 158
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 168/631 (26%), Positives = 291/631 (46%), Gaps = 72/631 (11%)
Query: 9 FQTTSK-IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
F+ T+K + + RSG I AR +F+++ R++V WN MI+ Y Q+ LF M
Sbjct: 40 FRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM-- 97
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
K D +++ +S F L R S N++I Y K + +
Sbjct: 98 --PKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFS-WNTMISGYAKNRRIGE 154
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMP-----------------ERV 170
A +F++M + N V+W +++ + + A+ +FR MP ER+
Sbjct: 155 ALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERL 214
Query: 171 -EIAW-------------------NTMIAGHARRGEVEACLGLFKEM------------- 197
E AW NT+I G+ +RG+VEA LF ++
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 198 ---CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
C+++ + + L S +L+ M I W N+++ Y +
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI--SW-------NTMIDGYVHV 325
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
DA +F+ + SWN ++ + +G+ + A F++ P+K+ VSW S+I Y
Sbjct: 326 SRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYE 385
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
+N + + A+ +F+ M + D ++L A L L G +H +++ + +
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VP 444
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
V N+L+ MY++CG++ S F + L++++++WN+M+ + HG A+EA+ LF M ++
Sbjct: 445 VHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSN 504
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
G+ P +TF +L C+H GL+DE A F SM S + + M+H + +V++ G E
Sbjct: 505 GIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEE 564
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
A + S + LL AC + ++G E + LEPE YV+L N+Y
Sbjct: 565 AMYIIT--SMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMY 622
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
G W EA VR M + +KK GSSW++
Sbjct: 623 ADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 182/661 (27%), Positives = 304/661 (45%), Gaps = 58/661 (8%)
Query: 11 TTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHL----------------- 52
+++++V+L ++SG + AR +FDEM +R+ +WNA+I AY
Sbjct: 25 SSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCER 84
Query: 53 ----------------GLYQQSLSLFGSMRISNSKP---DSFSYSAALSACAGGSHHGFG 93
G +++ +FG M D F+ + + A ++ +G
Sbjct: 85 DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYG 144
Query: 94 SVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD----EMADSNEVTWCSLLFA 149
+H ++V +G + +SLI MY KC K + +F+ E DS V +++ A
Sbjct: 145 EQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS--VARNAMIAA 202
Query: 150 YANSSLFGMALEVFRSMPERVE-IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
Y AL VF PE + I+WNT+IAG+A+ G E L + M E+ + D+ +
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHS 262
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
F A++N + + + G VH V+K+G S V + I+ Y K A +G
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
N S +++I + G +A F +KN+V WT+M +GY + L +
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARA 382
Query: 329 MTRNSIQL-DNLVAGAVLHACASLAILAHGKMVHSCIIRRGL--DKYLFVGNSLVNMYAK 385
N D+LV +VL AC+ A + GK +H +R G+ DK L + V+MY+K
Sbjct: 383 FIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVT--AFVDMYSK 440
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
CG++E + F E+D V +N+M+ HG ++ F +M G KPDE+TF +
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMAL 500
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTS 505
L C H GL+ EG +F+SM + +S H CM+D+ G+ + +A L + +
Sbjct: 501 LSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVE 560
Query: 506 GARTNSYEVLLG----ACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKE 561
V+LG AC + + V E L +E Y+ ++N Y +SG+W E
Sbjct: 561 KD-----AVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDE 615
Query: 562 AEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRHTRP 621
+ +R +M + ++ G SW I F S + S I +L+F+ ++
Sbjct: 616 MQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSEIDE 675
Query: 622 I 622
I
Sbjct: 676 I 676
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 212/471 (45%), Gaps = 44/471 (9%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G + H + SG + +N L+++Y K +AR VFDEM + N +W +++ AY
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 153 SSLFGMALEVFRSMP-ERVEIAWNTMIAGHARRGEVEA-CLGLFKEMCESLYQP---DQW 207
+ A E+F S ER I +NT+++G A+ E+ + +F EM D +
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 208 TFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS- 266
T + ++ + ++ YG +HG ++K+G +S++ Y+K + +FN
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 267 -FGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN-IVSWTSMIVGYTRNGNGELALS 324
+ V+ NA+I A+ + GD KA F + P+ N +SW ++I GY +NG E AL
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
M + M N ++ D GAVL+ +SL L GK VH+ +++ G FV + +V++Y
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYC 306
Query: 385 KCGDLEGSALA-------------------------------FCGILEKDLVSWNSMLFA 413
KCG+++ + A F + EK+LV W +M
Sbjct: 307 KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLG 366
Query: 414 FGLHGRANEAMCLFREMVASGVK-PDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLS 472
+ + + + L R +A+ PD + +L CS ++ G S G+
Sbjct: 367 YLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG-KEIHGHSLRTGIL 425
Query: 473 HGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
V VDM + G V A+ + + + T Y ++ C HG
Sbjct: 426 MDKKLVTAFVDMYSKCGNVEYAERI---FDSSFERDTVMYNAMIAGCAHHG 473
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 238/469 (50%), Gaps = 26/469 (5%)
Query: 148 FAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC-ESLYQPDQ 206
F++ N+ L+ L A+++ + HA + F+ M S+ +P+
Sbjct: 83 FSFPNTHLYAAVL-----------TAYSSSLPLHA-----SSAFSFFRLMVNRSVPRPNH 126
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK-LECPSDAMEMFN 265
+ + ++ + +VH + KSG+ + V+ ++L YA + + A ++F+
Sbjct: 127 FIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFD 186
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
N VSW A++ + + GD A F+ P++++ SW +++ T+NG A+S+
Sbjct: 187 EMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSL 246
Query: 326 FLDMTRN-SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
F M SI+ + + VL ACA L K +H+ RR L +FV NSLV++Y
Sbjct: 247 FRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYG 306
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA---SGVKPDEVT 441
KCG+LE ++ F +K L +WNSM+ F LHGR+ EA+ +F EM+ + +KPD +T
Sbjct: 307 KCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHIT 366
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
F G+L C+H GL+ +G +F M++ FG+ ++H C++D+LGR G EA L
Sbjct: 367 FIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA--LEVMS 424
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYV-MLSNLYCASGQWK 560
+ A + LL AC HG L + L L P GYV M++NLY G W+
Sbjct: 425 TMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNG-GYVAMMANLYGEMGNWE 483
Query: 561 EAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
EA RK + Q K PG S IEI N V F S + S P +I IL
Sbjct: 484 EARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMIL 532
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 202/437 (46%), Gaps = 46/437 (10%)
Query: 23 RIC---HARKLFDEMPDRDSVAWNAMITAYSH-LGLYQQSLSLFGSMRISNS--KPDSFS 76
R+C +AR +FD ++ + A++TAYS L L+ S F + ++ S +P+ F
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFI 128
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD-ARKVFDEM 135
Y L + S ++H + SG+ + V +L+ Y + AR++FDEM
Sbjct: 129 YPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEM 188
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
++ N V+W ++L YA S A+ +F MPER +WN ++A + G + LF+
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 196 EMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
M E +P++ T +++AC ++ + +H F + SS + V NS++ Y K
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGK- 307
Query: 255 ECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
C G+ ++A F+ A K++ +W SMI +
Sbjct: 308 -C-----------------------------GNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 315 RNGNGELALSMFLDMTR---NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLD 370
+G E A+++F +M + N I+ D++ +L+AC +++ G+ + R G++
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFRE 429
+ L+++ + G + + + ++ D W S+L A +HG + A +
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 430 MVASGVKPDEVTFTGML 446
+VA + P+ + M+
Sbjct: 458 LVA--LNPNNGGYVAMM 472
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 116/261 (44%), Gaps = 56/261 (21%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS- 70
T+ + ARSG I +A LF++MP+RD +WNA++ A + GL+ +++SLF M S
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
+P+ + LSACA IHA S + V+NSL+D+YGKC +A
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASS 316
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
VF +MA +T AWN+MI A G E
Sbjct: 317 VF-KMASKKSLT------------------------------AWNSMINCFALHGRSEEA 345
Query: 191 LGLFKEMCE---SLYQPDQWTFSALMNACT---------------------ESRDMLYGC 226
+ +F+EM + + +PD TF L+NACT E R YGC
Sbjct: 346 IAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGC 405
Query: 227 MVHGFVIKSGWSSAMEVKNSI 247
++ + A+EV +++
Sbjct: 406 LIDLLGRAGRFDEALEVMSTM 426
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 227/464 (48%), Gaps = 35/464 (7%)
Query: 167 PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ-PDQWTFSALMNACTESRDMLYG 225
PE +NT++ G++ E + +F EM + PD ++F+ ++ A R + G
Sbjct: 66 PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 125
Query: 226 CMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA---- 281
+H +K G S + V +++ Y C A ++F+ N V+WNA+I A
Sbjct: 126 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 185
Query: 282 ---------------------------HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYT 314
++K G+ + A F + P ++ VSW++MIVG
Sbjct: 186 NDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIA 245
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
NG+ + F ++ R + + + VL AC+ GK++H + + G +
Sbjct: 246 HNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVS 305
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKD-LVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
V N+L++MY++CG++ + L F G+ EK +VSW SM+ +HG+ EA+ LF EM A
Sbjct: 306 VNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAY 365
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
GV PD ++F +L CSH GLI+EG +F M + + ++H CMVD+ GR G + +
Sbjct: 366 GVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQK 425
Query: 494 AQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLY 553
A + A + LLGAC +HG++ V + L L+P V+LSN Y
Sbjct: 426 AYDFICQMPIPPTAIV--WRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAY 483
Query: 554 CASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNN 597
+G+WK+ +RK M+ Q +KK S +E+ + F +G
Sbjct: 484 ATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 194/437 (44%), Gaps = 66/437 (15%)
Query: 17 SLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSF 75
+++ S + +AR+L P+ D+ +N ++ YS S+++F M R PDSF
Sbjct: 48 AISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSF 107
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
S++ + A G +H + G S L V +LI MYG C ARKVFDEM
Sbjct: 108 SFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM 167
Query: 136 ADSNEVTWCSLLFA-------------------------------YANSSLFGMALEVFR 164
N V W +++ A Y + A +F
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS 227
Query: 165 SMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLY 224
MP R +++W+TMI G A G F+E+ + P++ + + +++AC++S +
Sbjct: 228 EMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEF 287
Query: 225 GCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMK 284
G ++HGFV K+G+S + V NA+ID + +
Sbjct: 288 GKILHGFVEKAGYSWIVSVN-------------------------------NALIDMYSR 316
Query: 285 LGDTQKAFLAFQQAPDKN-IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
G+ A L F+ +K IVSWTSMI G +G GE A+ +F +MT + D + +
Sbjct: 317 CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFIS 376
Query: 344 VLHACASLAILAHGKMVHSCIIR-RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LE 401
+LHAC+ ++ G+ S + R ++ + +V++Y + G L+ + C + +
Sbjct: 377 LLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIP 436
Query: 402 KDLVSWNSMLFAFGLHG 418
+ W ++L A HG
Sbjct: 437 PTAIVWRTLLGACSSHG 453
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/581 (27%), Positives = 276/581 (47%), Gaps = 75/581 (12%)
Query: 11 TTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
+ S I A+ R RK+FDEM RD+V++ ++I + GL +++ L M
Sbjct: 85 SNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGF 144
Query: 71 KPDSFSYSAALSACAG-GSHHGFGSVIHALVVV-SGYRSSLPVANSLIDMYGKCLKPHDA 128
P S ++ L+ C GS + HALV+V + S+ ++ +L+DMY K
Sbjct: 145 IPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLK------- 197
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
FD+ A A VF M + E++W MI+G E
Sbjct: 198 ---FDDHA---------------------AAFHVFDQMEVKNEVSWTAMISGCVANQNYE 233
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCM----VHGFVIKSGWSSAMEVK 244
+ LF+ M +P++ T +++ AC E + YG +HGF + G + +
Sbjct: 234 MGVDLFRAMQRENLRPNRVTLLSVLPACVE---LNYGSSLVKEIHGFSFRHGCHADERLT 290
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
+ ++ Y + G+ + + F+ + +++V
Sbjct: 291 AAFMTMYCRC-------------------------------GNVSLSRVLFETSKVRDVV 319
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
W+SMI GY G+ +++ M + I+ +++ A++ AC + +L+ VHS I
Sbjct: 320 MWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQI 379
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
++ G ++ +GN+L++MYAKCG L + F + EKDLVSW+SM+ A+GLHG +EA+
Sbjct: 380 LKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEAL 439
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
+F+ M+ G + D++ F +L C+H GL++E F + + ++ + ++H AC +++
Sbjct: 440 EIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINL 498
Query: 485 LGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGT-GSSVGEYLKTLEPEKE 543
LGR G + +A + AR + LL AC HG L G + L EP+
Sbjct: 499 LGRFGKIDDAFEVTINMPMKPSARI--WSSLLSACETHGRLDVAGKIIANELMKSEPDNP 556
Query: 544 VGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
YV+LS ++ SG + AE VR+ M + + K G S IE
Sbjct: 557 ANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/456 (21%), Positives = 187/456 (41%), Gaps = 82/456 (17%)
Query: 54 LYQQSLSLFGSMRISNSKPDSFS--YSAALSACAGGSHHGF-GSVIHALVVVSGYRSSLP 110
Y ++L L+ ++I + + F+ + + ACA G+ +H L + +G
Sbjct: 25 FYDEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTV 83
Query: 111 VANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV 170
V+NSLI MY K + + RKVFDEM + V++CS++ + L A++
Sbjct: 84 VSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMK--------- 134
Query: 171 EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE-SRDMLYGCMVH 229
L KEM + P ++L+ CT M H
Sbjct: 135 ----------------------LIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFH 172
Query: 230 GFV-IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDT 288
V + ++ + +++ Y K + + A +F+ N+VS
Sbjct: 173 ALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS-------------- 218
Query: 289 QKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHAC 348
WT+MI G N N E+ + +F M R +++ + + +VL AC
Sbjct: 219 -----------------WTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
Query: 349 ASLAILAHG----KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL 404
L +G K +H R G + + + MY +CG++ S + F +D+
Sbjct: 262 VE---LNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV 318
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRS 464
V W+SM+ + G +E M L +M G++ + VT ++ C++ L+ +F +
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLL----SFAST 374
Query: 465 MSSEFGLSHGMDHVA---CMVDMLGRGGYVAEAQSL 497
+ S+ M H+ ++DM + G ++ A+ +
Sbjct: 375 VHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREV 410
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 236/496 (47%), Gaps = 47/496 (9%)
Query: 92 FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYA 151
G ++H+ + G S + V +SLI MYGKC ARKVFDEM + N TW +++ Y
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 152 NSSLFGMALEVFRSMPE-RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFS 210
++ +A +F + R + W MI G+ +R E+E LF+ M L W S
Sbjct: 124 SNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAW--S 181
Query: 211 ALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF 270
++ +R M DA + F
Sbjct: 182 VMLGVYVNNRKM-----------------------------------EDARKFFEDIPEK 206
Query: 271 NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMT 330
N W+ ++ + ++GD +A F + +++V W ++I GY +NG + A+ F +M
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 331 RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE 390
+ D + ++L ACA L G+ VHS I RG++ FV N+L++MYAKCGDLE
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLE 326
Query: 391 GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS 450
+ F I + + NSM+ +HG+ EA+ +F M + +KPDE+TF +L C
Sbjct: 327 NATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACV 386
Query: 451 HLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK-YSKTSGART 509
H G + EG F M ++ + + H C++ +LGR G + EA L K+ + K +
Sbjct: 387 HGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVL 445
Query: 510 NSYEVLLGACHAHGDLGTGSSVGEYLKT----LEPEKEVGYVMLSNLYCASGQWKEAEIV 565
+ LLGAC H D V + ++T E +SNLY + +W+ AE +
Sbjct: 446 GA---LLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEAL 502
Query: 566 RKEMLDQGVKKVPGSS 581
R EM +G++K PG S
Sbjct: 503 RVEMEKRGLEKSPGLS 518
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
R G + AR +F + RD V WN +I Y+ G ++ F +M+ +PD+ + S+
Sbjct: 220 RIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSS 279
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
LSACA G +H+L+ G + V+N+LIDMY KC +A VF+ ++
Sbjct: 280 ILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS-VR 338
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
V C N+MI+ A G+ + L +F M
Sbjct: 339 SVACC------------------------------NSMISCLAIHGKGKEALEMFSTMES 368
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMV 228
+PD+ TF A++ AC ++ G +
Sbjct: 369 LDLKPDEITFIAVLTACVHGGFLMEGLKI 397
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 247/503 (49%), Gaps = 34/503 (6%)
Query: 116 IDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWN 175
+ MY K A V+ M N ++ L+ Y + A +VF MP+R WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 176 TMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
MIAG + E L LF+EM + PD++T ++ + R + G +HG+ IK
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAF 295
G + V +S+ Y M+ G Q +
Sbjct: 121 GLELDLVVNSSLAHMY-------------------------------MRNGKLQDGEIVI 149
Query: 296 QQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILA 355
+ P +N+V+W ++I+G +NG E L ++ M + + + + VL +C+ LAI
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209
Query: 356 HGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
G+ +H+ I+ G + V +SL++MY+KCG L +A AF ++D V W+SM+ A+G
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 416 LHGRANEAMCLFREMV-ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHG 474
HG+ +EA+ LF M + ++ +EV F +L CSH GL D+G F M ++G G
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 475 MDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEY 534
+ H C+VD+LGR G + +A+++ + + ++ LL AC+ H + V +
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI--WKTLLSACNIHKNAEMAQRVFKE 387
Query: 535 LKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVS 594
+ ++P YV+L+N++ ++ +W++ VRK M D+ VKK G SW E + V F
Sbjct: 388 ILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKM 447
Query: 595 GNNSSPYMADISNILYFLEIEMR 617
G+ S +I + L L +EM+
Sbjct: 448 GDRSQSKSKEIYSYLKELTLEMK 470
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 195/444 (43%), Gaps = 76/444 (17%)
Query: 4 MRSYLFQTTSKIVS-LARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
MR + +++ +++ R+G + +ARK+FDEMPDR WNAMI ++ LSLF
Sbjct: 20 MRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLF 79
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
M PD ++ + S AG G IH + G L V +SL MY +
Sbjct: 80 REMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRN 139
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
K D V M P R +AWNT+I G+A
Sbjct: 140 GKLQDGEIVIRSM-------------------------------PVRNLVAWNTLIMGNA 168
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
+ G E L L+K M S +P++ TF ++++C++ G +H IK G SS +
Sbjct: 169 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 228
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKN 302
V +S++S Y+K C DA + F+ + D++
Sbjct: 229 VVSSLISMYSKCGCLGDAAKAFS-------------------------------EREDED 257
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMT-RNSIQLDNLVAGAVLHACASLAILAHG---- 357
V W+SMI Y +G G+ A+ +F M + +++++ + +L+AC+ + G
Sbjct: 258 EVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELF 317
Query: 358 -KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFG 415
MV + GL Y V V++ + G L + A+ ++ D+V W ++L A
Sbjct: 318 DMMVEKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACN 373
Query: 416 LHGRANEAMCLFREMVASGVKPDE 439
+H A A +F+E++ + P++
Sbjct: 374 IHKNAEMAQRVFKEILQ--IDPND 395
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 260/535 (48%), Gaps = 43/535 (8%)
Query: 81 LSACAGGSHHGFGSVIHALVVVSGYRSSLP--VANSLIDMYGKCLKPHDARKVFDEMADS 138
L CA S G +HA++ SG + + ++N+L Y + A+K+FDE+
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP-- 70
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ E+ + W T+++ +R G + + LF EM
Sbjct: 71 ---------------------------LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+ D + L C + D+ + HG +K G ++++V N+++ Y K S
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVS 163
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
+ +F + VSW ++D +K ++ F + P++N V+WT M+ GY G
Sbjct: 164 EVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGF 223
Query: 319 GELALSMFLDMT-RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL-----DKY 372
L + +M R L+ + ++L ACA L G+ VH +++ + Y
Sbjct: 224 TREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY 283
Query: 373 --LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
+ VG +LV+MYAKCG+++ S F + ++++V+WN++ +HG+ + +F +M
Sbjct: 284 DDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
+ VKPD++TFT +L CSH G++DEG+ F S+ +GL +DH ACMVD+LGR G
Sbjct: 344 IRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGL 401
Query: 491 VAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLS 550
+ EA+ L ++ LLG+C HG + + L + P +++S
Sbjct: 402 IEEAEILMREMPVPPNEVVLGS--LLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMS 459
Query: 551 NLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADI 605
N+Y A G+ A+ +R + +G++K+PG S I + + V F SG+ S P +I
Sbjct: 460 NMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEI 514
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 199/455 (43%), Gaps = 64/455 (14%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMP--DRDSVAWNAMITAYSHLGLYQQSLSLF 62
RSYL + A SG + A+KLFDE+P ++D+V W +++++S GL S+ LF
Sbjct: 42 RSYLSNALFQF--YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLF 99
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
MR + D S CA GF H + V G +S+ V N+L+DMYGKC
Sbjct: 100 VEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKC 159
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
+ +++F+E+ + + V+W +L EVF MPER +AW M+AG+
Sbjct: 160 GLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYL 219
Query: 183 RRGEVEACLGLFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAM 241
G L L EM + + T ++++AC +S +++ G VH + +K
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKK------ 273
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
M M + + A++D + K G+ + F+ +
Sbjct: 274 ------------------EMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKR 315
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH 361
N+V+W ++ G +G G + + MF M R ++ D+L AVL AC+ H
Sbjct: 316 NVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS-----------H 363
Query: 362 SCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRAN 421
S I+ G + +L F G LE + + M+ G G
Sbjct: 364 SGIVDEGWRCF-------------------HSLRFYG-LEPKVDHYACMVDLLGRAGLIE 403
Query: 422 EAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
EA L REM V P+EV +L +CS G ++
Sbjct: 404 EAEILMREM---PVPPNEVVLGSLLGSCSVHGKVE 435
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 264/564 (46%), Gaps = 46/564 (8%)
Query: 24 ICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSA 83
+ + +++ DS +W ++ S +++++ ++ M S P S + ++ L A
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 84 CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
C + G IHA + +G + V L+ +Y + A+K FD++A+ N V+W
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
SLL Y S A VF +PE+ ++WN +I+ +A++G++ LF M L
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAM--PLKS 231
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
P W ++ G+ + E+K A
Sbjct: 232 PASWN-----------------------ILIGGYVNCREMKL--------------ARTY 254
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
F++ N VSW +I + KLGD Q A F+ K+ + + +MI YT+NG + AL
Sbjct: 255 FDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDAL 314
Query: 324 SMFLDM-TRNS-IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
+F M RNS IQ D + +V+ A + L + G V S I G+ + SL++
Sbjct: 315 KLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLID 374
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
+Y K GD + F + +KD VS+++M+ G++G A EA LF M+ + P+ VT
Sbjct: 375 LYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVT 434
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
FTG+L SH GL+ EG+ F SM + L DH MVDMLGR G + EA L K
Sbjct: 435 FTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYV-MLSNLYCASGQWK 560
A + LL A H ++ G + LE + GY+ L+ +Y + G+W
Sbjct: 494 PMQPNAGV--WGALLLASGLHNNVEFGEIACSHCVKLETD-PTGYLSHLAMIYSSVGRWD 550
Query: 561 EAEIVRKEMLDQGVKKVPGSSWIE 584
+A VR + ++ + K G SW+E
Sbjct: 551 DARTVRDSIKEKKLCKTLGCSWVE 574
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 192/441 (43%), Gaps = 52/441 (11%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
+R G I A+K FD++ ++++V+WN+++ Y G ++ +F + + D+ S++
Sbjct: 150 SRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI----PEKDAVSWN 205
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA-NSLIDMYGKCLKPHDARKVFDEMAD 137
+S+ A G + +A + S P + N LI Y C + AR FD M
Sbjct: 206 LIISSYAKK-----GDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQ 260
Query: 138 SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM 197
N V+W +++ Y A E+FR M ++ ++ ++ MIA + + G+ + L LF +M
Sbjct: 261 KNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Query: 198 CE--SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
E S QPD+ T S++++A ++ + +G V ++ + G + S++ Y K
Sbjct: 321 LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMK-- 378
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
D + F F N+ K+ VS+++MI+G
Sbjct: 379 -GGDFAKAFKMFSNLNK----------------------------KDTVSYSAMIMGCGI 409
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
NG A S+F M I + + +L A + ++ G + + L+
Sbjct: 410 NGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADH 469
Query: 376 GNSLVNMYAKCGDLEGS-ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
+V+M + G LE + L ++ + W ++L A GLH F E+ S
Sbjct: 470 YGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVE-----FGEIACSH 524
Query: 435 VKPDEVTFTGMLMTCSHLGLI 455
E TG L SHL +I
Sbjct: 525 CVKLETDPTGYL---SHLAMI 542
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 131/410 (31%), Positives = 211/410 (51%), Gaps = 15/410 (3%)
Query: 217 TESRDMLYGCMVHGFVIKSGWSSA-----------MEVKNSILSFYAKLECPSDAMEMFN 265
E +L+ M++G+++ SA + + N+++S Y ++ +A +F+
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
+ +SWN +++ + +GD + F P++N+ SW +I GY +NG L
Sbjct: 115 QMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGS 174
Query: 326 FLDMT-RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY-LFVGNSLVNMY 383
F M S+ ++ VL ACA L GK VH G +K + V N+L++MY
Sbjct: 175 FKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMY 234
Query: 384 AKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
KCG +E + F GI +DL+SWN+M+ HG EA+ LF EM SG+ PD+VTF
Sbjct: 235 GKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFV 294
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSK 503
G+L C H+GL+++G A+F SM ++F + ++H C+VD+L R G++ +A K
Sbjct: 295 GVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPV 354
Query: 504 TSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAE 563
+ A + LLGA + + G E L LEP +VMLSN+Y +G++ +A
Sbjct: 355 KADAVI--WATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAA 412
Query: 564 IVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLE 613
++ M D G KK G SWIE + + F S P ++ IL L+
Sbjct: 413 RLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILRELK 462
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 141/338 (41%), Gaps = 72/338 (21%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G I A K+F EM +++ V W +MI Y L + L + R + P+
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGY----LLNKDL--VSARRYFDLSPER------- 88
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
++ ++SGY + + N L +AR +FD+M + +
Sbjct: 89 ------------DIVLWNTMISGY---IEMGNML-----------EARSLFDQMPCRDVM 122
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC-ES 200
+W ++L YAN VF MPER +WN +I G+A+ G V LG FK M E
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG 182
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA-MEVKNSILSFYAKLECPSD 259
P+ T + +++AC + +G VH + G++ + VKN+++ Y K
Sbjct: 183 SVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEI 242
Query: 260 AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNG 319
AME+F + +SWN +MI G +G+G
Sbjct: 243 AMEVFKGIKRRDLISWN-------------------------------TMINGLAAHGHG 271
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG 357
AL++F +M + I D + VL AC + ++ G
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG 309
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 88/200 (44%), Gaps = 33/200 (16%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS-KPDSFSY 77
A G + ++FD+MP+R+ +WN +I Y+ G + L F M S P+ +
Sbjct: 132 ANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATM 191
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+ LSACA FG +H GY + + V N+LIDMYGKC
Sbjct: 192 TLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKC-------------- 237
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
+A+EVF+ + R I+WNTMI G A G L LF E
Sbjct: 238 -----------------GAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHE 280
Query: 197 MCESLYQPDQWTFSALMNAC 216
M S PD+ TF ++ AC
Sbjct: 281 MKNSGISPDKVTFVGVLCAC 300
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 32/250 (12%)
Query: 285 LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF-LDMTRNSIQLDNLVAGA 343
+G A F + +KN+V WTSMI GY N + A F L R+ + + +++G
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKY----LFVGNSLVNMYAKCGDLEGSALAFCGI 399
+ G M+ + R D+ + N+++ YA GD+E F +
Sbjct: 101 I----------EMGNMLEA---RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDM 147
Query: 400 LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG-VKPDEVTFTGMLMTCSHLGLIDEG 458
E+++ SWN ++ + +GR +E + F+ MV G V P++ T T +L C+ LG D
Sbjct: 148 PERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD-- 205
Query: 459 FAFFRSMSSEFGLSHGMDHVAC-----MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYE 513
F ++G + G + V ++DM G+ G + A + K + S+
Sbjct: 206 ---FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRD---LISWN 259
Query: 514 VLLGACHAHG 523
++ AHG
Sbjct: 260 TMINGLAAHG 269
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 233/463 (50%), Gaps = 8/463 (1%)
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
AYA+ +L +F + + I + G + L+ ++ S P+++T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
FS+L+ +C+ G ++H V+K G V ++ YAK A ++F+
Sbjct: 133 FSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
+ VS A+I + K G+ + A F +++IVSW MI GY ++G AL +F
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 329 M-TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
+ + D + A L AC+ + L G+ +H + + + V L++MY+KCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA-SGVKPDEVTFTGML 446
LE + L F KD+V+WN+M+ + +HG + +A+ LF EM +G++P ++TF G L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 447 MTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSG 506
C+H GL++EG F SM E+G+ ++H C+V +LGR G + A K +
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNM--D 426
Query: 507 ARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVR 566
A + + +LG+C HGD G + EYL L + YV+LSN+Y + G ++ VR
Sbjct: 427 ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVR 486
Query: 567 KEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
M ++G+ K PG S IEI N V F +G+ +I +L
Sbjct: 487 NLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTML 529
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 183/404 (45%), Gaps = 39/404 (9%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A G+I H+ LF + D D + A I S GL Q+ L+ + S P+ F++S
Sbjct: 75 ASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFS 134
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
+ L +C+ S G +IH V+ G VA L+D+Y K A+KVFD M +
Sbjct: 135 SLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPER 190
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE-M 197
+ V+ +++ YA A +F SM ER ++WN MI G+A+ G L LF++ +
Sbjct: 191 SLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLL 250
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
E +PD+ T A ++AC++ + G +H FV S ++V ++ Y+K
Sbjct: 251 AEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSL 310
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
+A+ +FN + V+WNA MI GY +G
Sbjct: 311 EEAVLVFNDTPRKDIVAWNA-------------------------------MIAGYAMHG 339
Query: 318 NGELALSMFLDMTR-NSIQLDNLVAGAVLHACASLAILAHG-KMVHSCIIRRGLDKYLFV 375
+ AL +F +M +Q ++ L ACA ++ G ++ S G+ +
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 376 GNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHG 418
LV++ + G L+ + + ++ D V W+S+L + LHG
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 91/214 (42%), Gaps = 33/214 (15%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
L +T+ I A+ G + AR LFD M +RD V+WN MI Y+ G +L LF +
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 68 S-NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
KPD + AALSAC+ G IH V S R ++ V LIDMY KC
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
+A VF++ + V W N MIAG+A G
Sbjct: 312 EAVLVFNDTPRKDIVAW-------------------------------NAMIAGYAMHGY 340
Query: 187 VEACLGLFKEMCE-SLYQPDQWTFSALMNACTES 219
+ L LF EM + QP TF + AC +
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 374
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 360 VHSCIIRRGL---DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
+H+ I+R L +Y + L YA G + S F ++ DL + + + +
Sbjct: 48 IHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASI 107
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
+G ++A L+ ++++S + P+E TF+ +L +CS + + +FGL G+D
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS-----TKSGKLIHTHVLKFGL--GID 160
Query: 477 -HVAC-MVDMLGRGGYVAEAQSLAKKYSKTS 505
+VA +VD+ +GG V AQ + + + S
Sbjct: 161 PYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 185/690 (26%), Positives = 313/690 (45%), Gaps = 113/690 (16%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR- 66
LF + + + A+SG + +ARK+F++M R++V N ++ +++ LF M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 67 ISNSKPDSFS-YSAALSACAGGSHHGF--GSVIHALVVVSGYRSSLP-VANSLIDMYGKC 122
+ + P+S+ ++ + G G +H V+ +G + + N L++MY KC
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 123 LKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHA 182
DAR+VF M D + V+ WN+MI G
Sbjct: 363 GSIADARRVFYFMTDKDSVS-------------------------------WNSMITGLD 391
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
+ G + +K M P +T + +++C + G +HG +K G +
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 243 VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMK----LGDTQKAFLAFQQA 298
V N++++ YA+ ++ ++F+S +QVSWN+II A + L + FL Q+A
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRA 511
Query: 299 PDK--------------------------------NI----VSWTSMIVGYTRNGNGELA 322
K NI + ++I Y + G +
Sbjct: 512 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGC 571
Query: 323 LSMFLDMT--RNSIQLDNLVAGAVLHACASLAI------LAHGKMVHS------------ 362
+F M R+++ +++++G + + + A+ L G+ + S
Sbjct: 572 EKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 631
Query: 363 -CIIRRGLDKY-----------LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSM 410
+ RG++ + + VG++LV+MY+KCG L+ + F + ++ SWNSM
Sbjct: 632 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 691
Query: 411 LFAFGLHGRANEAMCLFREMVASG-VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEF 469
+ + HG+ EA+ LF M G PD VTF G+L CSH GL++EGF F SMS +
Sbjct: 692 ISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 751
Query: 470 GLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGA-CHAHGDLGT- 527
GL+ ++H +CM D+LGR G + + + +K + +LGA C A+G
Sbjct: 752 GLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLI--WRTVLGACCRANGRKAEL 809
Query: 528 GSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRN 587
G E L LEPE V YV+L N+Y A G+W++ RK+M D VKK G SW+ +++
Sbjct: 810 GKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKD 869
Query: 588 VVTAFVSGNNSSPYMADISNILYFLEIEMR 617
V FV+G+ S P I L L +MR
Sbjct: 870 GVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 197/504 (39%), Gaps = 114/504 (22%)
Query: 21 SGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA 80
+G ARK+FDEMP R+ V+W +++ YS G ++++L M + +++ +
Sbjct: 49 TGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSV 108
Query: 81 LSACAGGSHHG--FGSVIHALVVVSGYRSSLPVA-------------------------- 112
L AC G FG IH L+ Y V+
Sbjct: 109 LRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEV 168
Query: 113 ------NSLIDMYGKCLKPHDARKVFDEM----ADSNEVTW-------CSL--------- 146
NS+I +Y + A ++F M + E T+ CSL
Sbjct: 169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE 228
Query: 147 --------------LF-------AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
LF A+A S A +VF M R + N ++ G R+
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNA-----CTESRDMLYGCMVHGFVIKSGWSSA 240
E LF +M S+ ++ L+++ E + G VHG VI +G
Sbjct: 289 WGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347
Query: 241 M-EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
M + N +++ YAK +DA +F F+
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVF--------------------------YFMT----- 376
Query: 300 DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
DK+ VSW SMI G +NG A+ + M R+ I + + L +CASL G+
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ 436
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGR 419
+H ++ G+D + V N+L+ +YA+ G L F + E D VSWNS++ A R
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Query: 420 A-NEAMCLFREMVASGVKPDEVTF 442
+ EA+ F +G K + +TF
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITF 520
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 184/467 (39%), Gaps = 120/467 (25%)
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
++N P SF + +C G H G H+ + + + + N+LI+ Y +
Sbjct: 1 MTNCVPLSF-----VQSCVG--HRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSV 53
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
ARKVFDEM P R ++W +++G++R GE
Sbjct: 54 SARKVFDEM-------------------------------PLRNCVSWACIVSGYSRNGE 82
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTE--SRDMLYGCMVHGFVIKSGWS------ 238
+ L ++M + +Q+ F +++ AC E S +L+G +HG + K ++
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 239 ---------------------SAMEVKNS-----ILSFYAKLECPSDAMEMFNS------ 266
+EVKNS I+S Y++ A +F+S
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 267 ------FGAFNQVSWN-----------------------------AIIDAHMKLGDTQKA 291
FG+ + + ++ A K G A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 292 FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN-----LVAGAVLH 346
F Q +N V+ ++VG R GE A +F+DM + I + L++ +
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSPESYVILLSSFPEY 321
Query: 347 ACASLAILAHGKMVHSCIIRRGLDKYLF-VGNSLVNMYAKCGDLEGSALAFCGILEKDLV 405
+ A L G+ VH +I GL ++ +GN LVNMYAKCG + + F + +KD V
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 406 SWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
SWNSM+ +G EA+ ++ M + P T L +C+ L
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 358 KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLH 417
+ HS + + LDK +++ N+L+N Y + GD + F + ++ VSW ++ + +
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 418 GRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS-EFGLSHGMD 476
G EA+ R+MV G+ ++ F +L C +G + G F R + F LS+ +D
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILFGRQIHGLMFKLSYAVD 138
Query: 477 HVACMV 482
V V
Sbjct: 139 AVVSNV 144
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 217/438 (49%), Gaps = 33/438 (7%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
A +F +M E + +N+M G++R LF E+ E PD +TF +L+ AC
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
++ + G +H +K G + V CP+ +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYV------------CPT-------------------L 170
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
I+ + + D A F + + +V + +MI GY R ALS+F +M ++ +
Sbjct: 171 INMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNE 230
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
+ +VL +CA L L GK +H + KY+ V +L++M+AKCG L+ + F
Sbjct: 231 ITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEK 290
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ KD +W++M+ A+ HG+A ++M +F M + V+PDE+TF G+L CSH G ++EG
Sbjct: 291 MRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEG 350
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGA 518
+F M S+FG+ + H MVD+L R G + +A K + + +LL A
Sbjct: 351 RKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPML--WRILLAA 408
Query: 519 CHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVP 578
C +H +L V E + L+ YV+LSNLY + +W+ + +RK M D+ KVP
Sbjct: 409 CSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVP 468
Query: 579 GSSWIEIRNVVTAFVSGN 596
G S IE+ NVV F SG+
Sbjct: 469 GCSSIEVNNVVHEFFSGD 486
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 155/368 (42%), Gaps = 63/368 (17%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+AR LF+ M + D V +N+M YS + SLF + PD++++ + L ACA
Sbjct: 81 YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 140
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G +H L + G ++ V +LI+MY +C AR VFD +
Sbjct: 141 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV--------- 191
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
E + +N MI G+ARR L LF+EM +P+
Sbjct: 192 ----------------------EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPN 229
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+ T +++++C + G +H + K + ++V +++ +AK DA+ +F
Sbjct: 230 EITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFE 289
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
+ +W+A+I A+ G +K+ L F++
Sbjct: 290 KMRYKDTQAWSAMIVAYANHGKAEKSMLMFER---------------------------- 321
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVNMYA 384
M ++Q D + +L+AC+ + G+ S ++ + G+ + S+V++ +
Sbjct: 322 ---MRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 385 KCGDLEGS 392
+ G+LE +
Sbjct: 379 RAGNLEDA 386
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSL 61
HS Y+ T+ I A+ G + A +F++M +D+ AW+AMI AY++ G ++S+ +
Sbjct: 259 HSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVS-GYRSSLPVANSLIDMYG 120
F MR N +PD ++ L+AC+ G + +V G S+ S++D+
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 121 KCLKPHDARKVFDEMADS-NEVTWCSLLFAYANSSLFGMALEV 162
+ DA + D++ S + W LL A ++ + +A +V
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKV 421
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 252/549 (45%), Gaps = 70/549 (12%)
Query: 39 SVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHA 98
S ++N ++++Y+ + ++ + + + PD F++ AC S G IH
Sbjct: 71 SFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHG 130
Query: 99 LVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGM 158
+V G+ + V NSL+ YG C + +A KVF EM
Sbjct: 131 IVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEM----------------------- 167
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
P R ++W +I G R G + L F +M +P+ T+ ++ +
Sbjct: 168 --------PVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGR 216
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
+ G +HG ++K ++E N+++ Y K E
Sbjct: 217 VGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCE----------------------- 253
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF-LDMTRNSIQLD 337
+L D + F ++ K+ VSW SMI G + A+ +F L T + I+ D
Sbjct: 254 -----QLSDAMRVFGELEK---KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFC 397
+ +VL ACASL + HG+ VH I+ G+ +G ++V+MYAKCG +E + F
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDE 457
GI K++ +WN++L +HG E++ F EMV G KP+ VTF L C H GL+DE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 458 GFAFFRSMSS-EFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLL 516
G +F M S E+ L ++H CM+D+L R G + EA L K R +L
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICG--AIL 483
Query: 517 GACHAHGDL-GTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
AC G L + + +E E YV+LSN++ A+ +W + +R+ M +G+
Sbjct: 484 SACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGIS 543
Query: 576 KVPGSSWIE 584
KVPGSS+IE
Sbjct: 544 KVPGSSYIE 552
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 35/255 (13%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+A K+F EMP RD V+W +IT ++ GLY+++L F M + +P+ +Y L +
Sbjct: 159 NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSG 215
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G IH L++ SL N+LIDMY KC + DA +VF E+ ++V+
Sbjct: 216 RVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVS--- 272
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM-CESLYQP 204
WN+MI+G + + LF M S +P
Sbjct: 273 ----------------------------WNSMISGLVHCERSKEAIDLFSLMQTSSGIKP 304
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
D +++++AC + +G VH +++ +G + +I+ YAK A+E+F
Sbjct: 305 DGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 265 NSFGAFNQVSWNAII 279
N + N +WNA++
Sbjct: 365 NGIRSKNVFTWNALL 379
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 270/575 (46%), Gaps = 49/575 (8%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHAL 99
+ WN +I +Y +Q+S+S++ M + D F+Y + + ACA +G V+H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMA 159
+ VS +R +L V N+LI MY + K AR++FD M++ + V+W +++ Y + G A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 160 LEVFRSM----PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
++ M E + WNT+ G G L M + + A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 216 CTESRDMLYGCMVHGFVIKS-GWSSAME-VKNSILSFYAKLECPSDAMEMFNSFGAFNQV 273
C+ + +G + H VI+S +S ++ V+NS+++ Y++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSR-------------------- 369
Query: 274 SWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
D + AF+ FQQ ++ +W S+I G+ N E + +M +
Sbjct: 370 -----------CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVNMYAKCGDLEGS 392
+++ ++L A + L HGK H I+RR L + NSLV+MYAK G++ +
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
F + ++D V++ S++ +G G+ A+ F++M SG+KPD VT +L CSH
Sbjct: 479 KRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 453 GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL--AKKYSKTSGARTN 510
L+ EG F M FG+ ++H +CMVD+ R GY+ +A+ + Y +S
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAM--- 595
Query: 511 SYEVLLGACHAHGDLGTGS-SVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEM 569
LL AC HG+ G + + L +PE Y++L+++Y +G W + V+ +
Sbjct: 596 -CATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Query: 570 LDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMAD 604
D GV+K + +E + + G N+ P D
Sbjct: 655 SDLGVQKAHEFALME----TDSELDGENNKPMNDD 685
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 219/511 (42%), Gaps = 52/511 (10%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA--LSACAGGSHHGFGSVIH 97
V +N+ SH LY+ + F +R + + YS+A LS C G + G +H
Sbjct: 48 VLFNSFRHCISHGQLYE-AFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLH 106
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFG 157
A + SG + L+ Y F+ + ++ +T NS
Sbjct: 107 AHCISSGLEFDSVLVPKLVTFYS----------AFNLLDEAQTIT--------ENS---- 144
Query: 158 MALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACT 217
E+ +P WN +I + R + + ++K M + D++T+ +++ AC
Sbjct: 145 ---EILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
D YG +VHG + S + V N+++S Y + A +F+ + VSWNA
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 278 IIDAHM---KLGDTQKAF-LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
II+ + KLG+ K + + +IV+W ++ G GN AL+ + M +
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIR-----RGLDKYLFVGNSLVNMYAKCGD 388
+++ ++ L AC+ + L GK+ H +IR +D V NSL+ MY++C D
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSD 372
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
L + + F + L +WNS++ F + R+ E L +EM+ SG P+ +T +L
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 449 CSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGAR 508
+ +G + G F + + +VDM + G + A+ + K
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV- 491
Query: 509 TNSYEVLLGACHAHGDLGTGSSVGEYLKTLE 539
+Y L+ +G LG G + K ++
Sbjct: 492 --TYTSLID---GYGRLGKGEVALAWFKDMD 517
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 189/447 (42%), Gaps = 78/447 (17%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S R L+ + I R G++ AR+LFD M +RD+V+WNA+I Y+ ++ L
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRS------SLPVANSLI 116
M +S + +++ C G+ I AL V G R+ S+ + N L
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEA-----GNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 117 D-------MYGK---------CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMAL 160
+GK C HD V + SL+ Y+ S A
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN-----------SLITMYSRCSDLRHAF 377
Query: 161 EVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
VF+ + WN++I+G A E L KEM S + P+ T ++++
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
++ +G H ++++ + D + + WN+++D
Sbjct: 438 NLQHGKEFHCYILRR-------------------QSYKDCL-----------ILWNSLVD 467
Query: 281 AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
+ K G+ A F ++ V++TS+I GY R G GE+AL+ F DM R+ I+ D++
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 341 AGAVLHACASLAILAHG-----KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
AVL AC+ ++ G KM H IR L+ Y + +V++Y + G L+ +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDI 583
Query: 396 FCGI-LEKDLVSWNSMLFAFGLHGRAN 421
F I E ++L A +HG N
Sbjct: 584 FHTIPYEPSSAMCATLLKACLIHGNTN 610
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 270/575 (46%), Gaps = 49/575 (8%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHAL 99
+ WN +I +Y +Q+S+S++ M + D F+Y + + ACA +G V+H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMA 159
+ VS +R +L V N+LI MY + K AR++FD M++ + V+W +++ Y + G A
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 160 LEVFRSM----PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
++ M E + WNT+ G G L M + + A
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKA 329
Query: 216 CTESRDMLYGCMVHGFVIKS-GWSSAME-VKNSILSFYAKLECPSDAMEMFNSFGAFNQV 273
C+ + +G + H VI+S +S ++ V+NS+++ Y++
Sbjct: 330 CSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSR-------------------- 369
Query: 274 SWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
D + AF+ FQQ ++ +W S+I G+ N E + +M +
Sbjct: 370 -----------CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG 418
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVNMYAKCGDLEGS 392
+++ ++L A + L HGK H I+RR L + NSLV+MYAK G++ +
Sbjct: 419 FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAA 478
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
F + ++D V++ S++ +G G+ A+ F++M SG+KPD VT +L CSH
Sbjct: 479 KRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHS 538
Query: 453 GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL--AKKYSKTSGARTN 510
L+ EG F M FG+ ++H +CMVD+ R GY+ +A+ + Y +S
Sbjct: 539 NLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAM--- 595
Query: 511 SYEVLLGACHAHGDLGTGS-SVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEM 569
LL AC HG+ G + + L +PE Y++L+++Y +G W + V+ +
Sbjct: 596 -CATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLL 654
Query: 570 LDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMAD 604
D GV+K + +E + + G N+ P D
Sbjct: 655 SDLGVQKAHEFALME----TDSELDGENNKPMNDD 685
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 219/511 (42%), Gaps = 52/511 (10%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA--LSACAGGSHHGFGSVIH 97
V +N+ SH LY+ + F +R + + YS+A LS C G + G +H
Sbjct: 48 VLFNSFRHCISHGQLYE-AFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLH 106
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFG 157
A + SG + L+ Y F+ + ++ +T NS
Sbjct: 107 AHCISSGLEFDSVLVPKLVTFYS----------AFNLLDEAQTIT--------ENS---- 144
Query: 158 MALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACT 217
E+ +P WN +I + R + + ++K M + D++T+ +++ AC
Sbjct: 145 ---EILHPLP------WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA 195
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
D YG +VHG + S + V N+++S Y + A +F+ + VSWNA
Sbjct: 196 ALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNA 255
Query: 278 IIDAHM---KLGDTQKAF-LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
II+ + KLG+ K + + +IV+W ++ G GN AL+ + M +
Sbjct: 256 IINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCN 315
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIR-----RGLDKYLFVGNSLVNMYAKCGD 388
+++ ++ L AC+ + L GK+ H +IR +D V NSL+ MY++C D
Sbjct: 316 VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSD 372
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
L + + F + L +WNS++ F + R+ E L +EM+ SG P+ +T +L
Sbjct: 373 LRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPL 432
Query: 449 CSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGAR 508
+ +G + G F + + +VDM + G + A+ + K
Sbjct: 433 FARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKV- 491
Query: 509 TNSYEVLLGACHAHGDLGTGSSVGEYLKTLE 539
+Y L+ +G LG G + K ++
Sbjct: 492 --TYTSLID---GYGRLGKGEVALAWFKDMD 517
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 189/447 (42%), Gaps = 78/447 (17%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S R L+ + I R G++ AR+LFD M +RD+V+WNA+I Y+ ++ L
Sbjct: 214 SHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLL 273
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRS------SLPVANSLI 116
M +S + +++ C G+ I AL V G R+ S+ + N L
Sbjct: 274 DRMYLSGVEASIVTWNTIAGGCLEA-----GNYIGALNCVVGMRNCNVRIGSVAMINGLK 328
Query: 117 D-------MYGK---------CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMAL 160
+GK C HD V + SL+ Y+ S A
Sbjct: 329 ACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN-----------SLITMYSRCSDLRHAF 377
Query: 161 EVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
VF+ + WN++I+G A E L KEM S + P+ T ++++
Sbjct: 378 IVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVG 437
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
++ +G H ++++ + D + + WN+++D
Sbjct: 438 NLQHGKEFHCYILRR-------------------QSYKDCL-----------ILWNSLVD 467
Query: 281 AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
+ K G+ A F ++ V++TS+I GY R G GE+AL+ F DM R+ I+ D++
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 341 AGAVLHACASLAILAHG-----KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
AVL AC+ ++ G KM H IR L+ Y + +V++Y + G L+ +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHY----SCMVDLYCRAGYLDKARDI 583
Query: 396 FCGI-LEKDLVSWNSMLFAFGLHGRAN 421
F I E ++L A +HG N
Sbjct: 584 FHTIPYEPSSAMCATLLKACLIHGNTN 610
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 251/529 (47%), Gaps = 76/529 (14%)
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA----RKVFDEMADSNEVTWCSLLFAYA 151
IHA +VV+G S+L V LI Y L A K+FDE+ + V+ C
Sbjct: 31 IHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPD-VSIC------- 80
Query: 152 NSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSA 211
N ++ G A+ + E + L+ EM + PD++TF+
Sbjct: 81 -----------------------NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTF 117
Query: 212 LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF--------------------- 250
++ AC++ G HG V++ G+ VKN+++ F
Sbjct: 118 VLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAH 177
Query: 251 ----------YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD 300
YAK +AM +F+ +QV+WN +I +K + A F + +
Sbjct: 178 KVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTE 237
Query: 301 KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
K++V+W +MI GY G + AL +F +M D + ++L ACA L L GK +
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 361 HSCIIRRG-LDKYLFVG----NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFG 415
H I+ + ++VG N+L++MYAKCG ++ + F G+ ++DL +WN+++
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLA 357
Query: 416 LHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGM 475
LH A ++ +F EM V P+EVTF G+++ CSH G +DEG +F M + + +
Sbjct: 358 LH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 476 DHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL 535
H CMVDMLGR G + EA + A + LLGAC +G++ G E L
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV--WRTLLGACKIYGNVELGKYANEKL 474
Query: 536 KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
++ ++ YV+LSN+Y ++GQW + VRK D VKK G S IE
Sbjct: 475 LSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 199/457 (43%), Gaps = 76/457 (16%)
Query: 17 SLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFS 76
SL+ G + +A KLFDE+P D N ++ + ++++SL+ M PD ++
Sbjct: 55 SLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYT 114
Query: 77 YSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
++ L AC+ G H VV G+ + V N+LI + C A ++FD+ A
Sbjct: 115 FTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA 174
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTM------------------- 177
+++V W S+ YA A+ +F MP + ++AWN M
Sbjct: 175 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDR 234
Query: 178 ------------IAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYG 225
I+G+ G + LG+FKEM ++ PD T +L++AC D+ G
Sbjct: 235 FTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETG 294
Query: 226 CMVHGFVIKSG-WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMK 284
+H +++++ SS++ V I WNA+ID + K
Sbjct: 295 KRLHIYILETASVSSSIYVGTPI---------------------------WNALIDMYAK 327
Query: 285 LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
G +A F+ D+++ +W ++IVG + + E ++ MF +M R + + + V
Sbjct: 328 CGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGV 386
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGN-----SLVNMYAKCGDLEGSALAFCGI 399
+ AC+ + G+ S + D Y N +V+M + G LE + + +
Sbjct: 387 ILACSHSGRVDEGRKYFSLM----RDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESM 442
Query: 400 -LEKDLVSWNSMLFAFGLHGR------ANEAMCLFRE 429
+E + + W ++L A ++G ANE + R+
Sbjct: 443 KIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRK 479
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/465 (29%), Positives = 231/465 (49%), Gaps = 23/465 (4%)
Query: 147 LFAYANS--SLFGMALEVFRSMPERVEIAWNTMIAG---HARRGEVEACLGLFKEMCESL 201
+ AYAN + + LE F WN +I + + + + ++ M
Sbjct: 7 IIAYANPIFHIRHLKLESF---------LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHR 57
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
PD TF L+ + + G H ++ G V+ S+L+ Y+ A
Sbjct: 58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ 117
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
+F+ G+ + +WN++++A+ K G A F + P++N++SW+ +I GY G +
Sbjct: 118 RVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKE 177
Query: 322 ALSMFLDMTRNS-----IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
AL +F +M ++ + VL AC L L GK VH+ I + ++ + +G
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG 237
Query: 377 NSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS-G 434
+L++MYAKCG LE + F + +KD+ ++++M+ ++G +E LF EM S
Sbjct: 238 TALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDN 297
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
+ P+ VTF G+L C H GLI+EG ++F+ M EFG++ + H CMVD+ GR G + EA
Sbjct: 298 INPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
Query: 495 QSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYC 554
+S + LL GD+ T + L L+P YV+LSN+Y
Sbjct: 358 ESFIASMPMEPDVLI--WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYA 415
Query: 555 ASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSS 599
+G+W E + +R EM +G+ KVPG S++E+ VV FV G+ S
Sbjct: 416 KTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQ 460
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 176/405 (43%), Gaps = 46/405 (11%)
Query: 18 LARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQ---SLSLFGSMRISNSKPDS 74
+A + I H R L +S WN +I A H Q +S++ MR PD
Sbjct: 8 IAYANPIFHIRHL-----KLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDF 62
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
++ L + H G HA +++ G V SL++MY C A++VFD+
Sbjct: 63 HTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD 122
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
+ W S++ AYA + L A ++F MPER I+W+ +I G+ G+ + L LF
Sbjct: 123 SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLF 182
Query: 195 KEM-----CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
+EM E+ +P+++T S +++AC + G VH ++ K + + +++
Sbjct: 183 REMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALID 242
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
YAK A +FN+ G+ K++ ++++M
Sbjct: 243 MYAKCGSLERAKRVFNALGS------------------------------KKDVKAYSAM 272
Query: 310 IVGYTRNGNGELALSMFLDMTR-NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR- 367
I G + +F +MT ++I +++ +L AC ++ GK +I
Sbjct: 273 ICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEF 332
Query: 368 GLDKYLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSML 411
G+ + +V++Y + G + E + +E D++ W S+L
Sbjct: 333 GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 36/212 (16%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS- 70
S + + A++G I ARKLFDEMP+R+ ++W+ +I Y G Y+++L LF M++
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 71 ----KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
+P+ F+ S LSAC G +HA + + + +LIDMY KC
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
A++VF+ + +V A++ MI A G
Sbjct: 252 RAKRVFNALGSKKDVK------------------------------AYSAMICCLAMYGL 281
Query: 187 VEACLGLFKEMCES-LYQPDQWTFSALMNACT 217
+ C LF EM S P+ TF ++ AC
Sbjct: 282 TDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 233/465 (50%), Gaps = 36/465 (7%)
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
+F S+P + +N++I ++ C+ ++ M S P +TF++++ +C +
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
+ G VH + SG+ V+ ++++FY+K
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC--------------------------- 155
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
GD + A F + P+K+IV+W S++ G+ +NG + A+ +F M + + D+
Sbjct: 156 ----GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE 401
++L ACA ++ G VH II GLD + +G +L+N+Y++CGD+ + F + E
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKE 271
Query: 402 KDLVSWNSMLFAFGLHGRANEAMCLFREMVAS-GVKPDEVTFTGMLMTCSHLGLIDEGFA 460
++ +W +M+ A+G HG +A+ LF +M G P+ VTF +L C+H GL++EG +
Sbjct: 272 TNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRS 331
Query: 461 FFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS-YEVLLGAC 519
++ M+ + L G++H CMVDMLGR G++ EA + T A + + +LGAC
Sbjct: 332 VYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGAC 391
Query: 520 HAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPG 579
H + G + + L LEP+ +VMLSN+Y SG+ E +R M+ ++K G
Sbjct: 392 KMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVG 451
Query: 580 SSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMRHTRPINF 624
S IE+ N F G+ S + I +LE + + I +
Sbjct: 452 YSVIEVENKTYMFSMGDESH---QETGEIYRYLETLISRCKEIGY 493
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 41/342 (11%)
Query: 13 SKIVSLARSGR-ICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
+K+++LA S R I + LF +P D +N++I + S L L ++ + M SN
Sbjct: 45 TKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVS 104
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P ++++++ + +CA S G +H VVSG+ V +L+ Y KC AR+V
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD M PE+ +AWN++++G + G + +
Sbjct: 165 FDRM-------------------------------PEKSIVAWNSLVSGFEQNGLADEAI 193
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
+F +M ES ++PD TF +L++AC ++ + G VH ++I G +++ ++++ Y
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ-----APDKNIVSW 306
++ A E+F+ N +W A+I A+ G Q+A F + P N V++
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHAC 348
+++ G E S++ MT++ L+ G H C
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTKSY----RLIPGVEHHVC 351
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS-NS 70
T+ I +R G + AR++FD+M + + AW AMI+AY G QQ++ LF M
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANS--LIDMYGKCLKPHDA 128
P++ ++ A LSACA G ++ + S YR V + ++DM G+ +A
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS-YRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 129 RKVFDEMADSNEVT----WCSLLFAYANSSLFGMALEVFRSM 166
K ++ + + T W ++L A + + +E+ + +
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRL 407
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 249/509 (48%), Gaps = 69/509 (13%)
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
IS ++P+ F+ + L C G +H L+ R++L +++ L+ +Y C
Sbjct: 87 ISLTEPEIFA--SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAE 144
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
A +VFD M+ + SS F AWN++I+G+A G+
Sbjct: 145 VAHEVFDRMSKRD-------------SSPF----------------AWNSLISGYAELGQ 175
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
E + L+ +M E +PD++TF ++ AC + G +H ++K G+ + V N+
Sbjct: 176 YEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNA 235
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ YAK C GD KA F P K+ VSW
Sbjct: 236 LVVMYAK--C-----------------------------GDIVKARNVFDMIPHKDYVSW 264
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
SM+ GY +G AL +F M +N I+ D + +VL A + HG+ +H +IR
Sbjct: 265 NSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIR 321
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
RG++ L V N+L+ +Y+K G L + F +LE+D VSWN+++ A H + + +
Sbjct: 322 RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKY 378
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
F +M + KPD +TF +L C++ G++++G F MS E+G+ M+H ACMV++ G
Sbjct: 379 FEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYG 438
Query: 487 RGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGY 546
R G + EA S+ + T + LL AC+ HG+ G + L LEP+ E +
Sbjct: 439 RAGMMEEAYSMIVQEMGLEAGPT-VWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNF 497
Query: 547 VMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
+L +Y + + ++ E VR+ M+D+G++
Sbjct: 498 ELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 190/433 (43%), Gaps = 84/433 (19%)
Query: 2 HSMRSYLFQT----TSKIVSL-ARSGRICHARKLFDEMPDRDS--VAWNAMITAYSHLGL 54
H + YL + +SK+V L A G A ++FD M RDS AWN++I+ Y+ LG
Sbjct: 116 HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQ 175
Query: 55 YQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANS 114
Y+ +++L+ M KPD F++ L AC G G IH +V G+ + V N+
Sbjct: 176 YEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNA 235
Query: 115 LIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAW 174
L+ MY KC AR VFD + + V+W S+L Y + L AL++FR
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRL--------- 286
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
M ++ +PD+ S+++ + +G +HG+VI+
Sbjct: 287 ----------------------MVQNGIEPDKVAISSVLARVLSFK---HGRQLHGWVIR 321
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLA 294
G + V N+++ Y+K A +F+ + VSWNAII AH
Sbjct: 322 RGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAH------------ 369
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
++N NG L F M R + + D + +VL CA+ ++
Sbjct: 370 -------------------SKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMV 407
Query: 355 AHGKMVHSCIIRR-GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-----LEKDLVSWN 408
G+ + S + + G+D + +VN+Y + G +E A+ I LE W
Sbjct: 408 EDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEE---AYSMIVQEMGLEAGPTVWG 464
Query: 409 SMLFAFGLHGRAN 421
++L+A LHG +
Sbjct: 465 ALLYACYLHGNTD 477
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 242/530 (45%), Gaps = 63/530 (11%)
Query: 91 GFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAY 150
F +++H L + G+ S N L+ Y K + + ARK+FDEM + N V+
Sbjct: 46 AFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVS-------- 97
Query: 151 ANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL-YQPDQWTF 209
W ++I+G+ G+ + L +F++M E P+++TF
Sbjct: 98 -----------------------WTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTF 134
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGA 269
+++ AC+ + G +H + SG + V +S++ Y K A +F+S
Sbjct: 135 ASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIG 194
Query: 270 FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF--L 327
+ +N+VSWTSMI Y +N G A+ +F
Sbjct: 195 YG-----------------------------RNVVSWTSMITAYAQNARGHEAIELFRSF 225
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
+ S + + + +V+ AC+SL L GK+ H + R G + V SL++MYAKCG
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCG 285
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLM 447
L + F I ++S+ SM+ A HG A+ LF EMVA + P+ VT G+L
Sbjct: 286 SLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLH 345
Query: 448 TCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGA 507
CSH GL++EG + M+ ++G+ H C+VDMLGR G V EA LAK +
Sbjct: 346 ACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQ 405
Query: 508 RTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRK 567
+ LL A HG + S + L + Y+ LSN Y SG W+++E +R
Sbjct: 406 GALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRL 465
Query: 568 EMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
EM G K SWIE ++ V F +G+ S +I L LE M+
Sbjct: 466 EMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMK 515
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 199/430 (46%), Gaps = 91/430 (21%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F ++S + I ARKLFDEM + + V+W ++I+ Y+ +G Q +LS+F M
Sbjct: 65 FTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHED 124
Query: 69 NS-KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
P+ +++++ AC+ + G IHA + +SG R ++ V++SL+DMYGKC
Sbjct: 125 RPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVET 184
Query: 128 ARKVFDEMA--DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
AR+VFD M N V+W S++ AYA ++ A+E+FRS +N +
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS--------FNAALTSD---- 232
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
+ +Q+ +++++AC+ + +G + HG V + G+ S V
Sbjct: 233 -----------------RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVAT 275
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
S+L YAK C S L +K FL + +++S
Sbjct: 276 SLLDMYAK--CGS--------------------------LSCAEKIFLRIRC---HSVIS 304
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
+TSMI+ ++G GE A+ +F +M I + + VLHAC+ HS ++
Sbjct: 305 YTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACS-----------HSGLV 353
Query: 366 RRGL-------DKYLFVGNS-----LVNMYAKCGDLEGSALAFCGIL----EKDLVSWNS 409
GL +KY V +S +V+M + G ++ A + E+ + W +
Sbjct: 354 NEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVD-EAYELAKTIEVGAEQGALLWGA 412
Query: 410 MLFAFGLHGR 419
+L A LHGR
Sbjct: 413 LLSAGRLHGR 422
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPD--RDSVAWNAMITAYSHLGLYQQSLSL 61
+R + ++S + + + AR++FD M R+ V+W +MITAY+ +++ L
Sbjct: 162 LRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIEL 221
Query: 62 FGSMR--ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMY 119
F S +++ + + F ++ +SAC+ +G V H LV GY S+ VA SL+DMY
Sbjct: 222 FRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMY 281
Query: 120 GKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIA 179
KC A K+F + C + +Y +MI
Sbjct: 282 AKCGSLSCAEKIFLRIR-------CHSVISYT------------------------SMIM 310
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTES 219
A+ G EA + LF EM P+ T +++AC+ S
Sbjct: 311 AKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 225 bits (573), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 168/607 (27%), Positives = 279/607 (45%), Gaps = 79/607 (13%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSYSAALSACA 85
ARKLFDEM +RD ++W+ +I +Y L LF M + ++PD + ++ L AC
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 86 GGSHHGFGSVIHALVVVSGYR-SSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWC 144
G +H + G+ + + V NSLIDMY K A +VFDE T C
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDE-------TTC 290
Query: 145 SLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQP 204
R ++WN+++AG + L +F M + +
Sbjct: 291 ------------------------RNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEV 326
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
D+ T +L+ C L +HG +I+ G+ S
Sbjct: 327 DEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYES------------------------- 361
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALS 324
N+V+ +++IDA+ A K++VS ++MI G G + A+S
Sbjct: 362 ------NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 325 MFLDM--TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLD-KYLFVGNSLVN 381
+F M T N+I + +L L+AC+ A L K H IRR L + VG S+V+
Sbjct: 416 IFCHMRDTPNAITVISL-----LNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVD 470
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
YAKCG +E + F I EK+++SW ++ A+ ++G ++A+ LF EM G P+ VT
Sbjct: 471 AYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVT 530
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
+ L C+H GL+ +G F+SM E + H +C+VDML R G + A L K
Sbjct: 531 YLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Query: 502 SKTSGARTNSYEVLLGACHAHGD--LGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQW 559
+ A +++ +L C + T V E L+ LEP GY++ S+ + A W
Sbjct: 590 PEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLE-LEPLCSSGYLLASSTFAAEKSW 648
Query: 560 KEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR-- 617
++ ++R+ + ++ V+ V G S + N+ F++G+ S +++++++ L M+
Sbjct: 649 EDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHRCMKLD 708
Query: 618 -HTRPIN 623
PIN
Sbjct: 709 DTAGPIN 715
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 198/446 (44%), Gaps = 68/446 (15%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S+LFQ S + G +C + FD M RDSV+WN ++ G ++ L F +
Sbjct: 59 SWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL 118
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R+ +P++ + + AC S G IH V+ SG+ V NS++ MY
Sbjct: 119 RVWGFEPNTSTLVLVIHACR--SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADS-DS 175
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
ARK+FDEM+ ER I+W+ +I + +
Sbjct: 176 LSARKLFDEMS-------------------------------ERDVISWSVVIRSYVQSK 204
Query: 186 EVEACLGLFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVK 244
E L LFKEM E+ +PD T ++++ ACT D+ G VHGF I+ G+
Sbjct: 205 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGF------- 257
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
D ++F N++ID + K D AF F + +NIV
Sbjct: 258 --------------DLADVFVC---------NSLIDMYSKGFDVDSAFRVFDETTCRNIV 294
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
SW S++ G+ N + AL MF M + ++++D + ++L C K +H I
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
IRRG + +SL++ Y C ++ + + KD+VS ++M+ GR++EA+
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCS 450
+F M + P+ +T +L CS
Sbjct: 415 SIFCHMRDT---PNAITVISLLNACS 437
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 267 FGAFNQVSW----NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELA 322
F A ++SW N+I D +MK GD F ++ VSW ++ G G E
Sbjct: 52 FKACAKLSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEG 111
Query: 323 LSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
L F + + + V+HAC SL G+ +H +IR G V NS++ M
Sbjct: 112 LWWFSKLRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCM 169
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV-ASGVKPDEVT 441
YA L L F + E+D++SW+ ++ ++ + LF+EMV + +PD VT
Sbjct: 170 YADSDSLSARKL-FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVT 228
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV---AC--MVDMLGRG 488
T +L C+ + ID G RS+ F + G D C ++DM +G
Sbjct: 229 VTSVLKACTVMEDIDVG----RSVHG-FSIRRGFDLADVFVCNSLIDMYSKG 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 41/210 (19%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS + + A+ G I AR+ FD++ +++ ++W +I+AY+ GL ++L+LF M+
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYT 525
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P++ +Y AALSAC G G +I +V ++ SL + ++DM +
Sbjct: 526 PNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSR---------- 575
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI---AWNTMIAGHARR---- 184
+ A+E+ +++PE V+ AW +++G R
Sbjct: 576 ---------------------AGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKL 614
Query: 185 ---GEVEACLGLFKEMCESLYQPDQWTFSA 211
EV A + + +C S Y TF+A
Sbjct: 615 IITSEVVAEVLELEPLCSSGYLLASSTFAA 644
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 20/176 (11%)
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQL-DNLVAGAVLHACASLAILAHGKMVHSCII 365
+S I + +G +S + ++ R +Q D V V ACA L+
Sbjct: 13 SSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLS------------- 59
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
+LF GNS+ + Y KCGDL F + +D VSWN ++F +G E +
Sbjct: 60 ------WLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACM 481
F ++ G +P+ T ++ C L E + S G+S + + CM
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCM 169
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/452 (31%), Positives = 232/452 (51%), Gaps = 44/452 (9%)
Query: 138 SNEVTWCSLLFAYAN-SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
SN V L+ AY+ + LF +L VF MP R +WN +I +R G + LF
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 197 MC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
M ES +PD +T ++ AC+ SR+ G ++H +K G+SS++ V ++++ Y
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY---- 179
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
+ +G A F P ++ V +T+M GY +
Sbjct: 180 ---------------------------VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQ 212
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
G L L+MF +M + LD++V ++L AC L L HGK VH IRR L +
Sbjct: 213 QGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNL 272
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
GN++ +MY KC L+ + F + +D++SW+S++ +GL G + LF EM+ G+
Sbjct: 273 GNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGI 332
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
+P+ VTF G+L C+H GL+++ + +FR M E+ + + H A + D + R G + EA+
Sbjct: 333 EPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAE 391
Query: 496 SLAKKYSKTSGARTNSYEVLLGA----CHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSN 551
K+ + + + E ++GA C +G++ G V L L+P K YV L+
Sbjct: 392 ----KFLEDMPVKPD--EAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLAG 445
Query: 552 LYCASGQWKEAEIVRKEMLDQGVKKVPGSSWI 583
LY A+G++ EAE +R+ M ++ + KVPG S I
Sbjct: 446 LYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 171/431 (39%), Gaps = 99/431 (22%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSYSAALSACAGGS 88
+F MP R+ +WN +I +S G +S+ LF M R S +PD F+ L AC+
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 89 HHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLF 148
G +IH L + G+ SSL V+++L+ MY K ARK+FD+M
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM------------- 195
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
P R + + M G+ ++GE L +F+EM S + D
Sbjct: 196 ------------------PVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVV 237
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
+L+ AC + + +G VHG+ I+ + + N+I Y K A +F +
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
+ +SW +S+I+GY +G+ ++ +F +
Sbjct: 298 RRDVISW-------------------------------SSLILGYGLDGDVVMSFKLFDE 326
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVH-SCIIRRGLDKYLFVGNSLVNMYAKCG 387
M + I+ + + VL AC AHG +V S + R + +Y V + YA
Sbjct: 327 MLKEGIEPNAVTFLGVLSAC------AHGGLVEKSWLYFRLMQEYNIVPE--LKHYASVA 378
Query: 388 DLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLM 447
D A G+LE EA +M VKPDE +L
Sbjct: 379 DCMSRA----GLLE--------------------EAEKFLEDM---PVKPDEAVMGAVLS 411
Query: 448 TCSHLGLIDEG 458
C G ++ G
Sbjct: 412 GCKVYGNVEVG 422
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 42/232 (18%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S LF +++ ++ G++ HARKLFD+MP RDSV + AM Y G L++F M
Sbjct: 167 SSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREM 226
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
S DS + L AC G +H + L + N++ DMY KC
Sbjct: 227 GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSIL 286
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
A VF M+ + ++W SL I G+ G
Sbjct: 287 DYAHTVFVNMSRRDVISWSSL-------------------------------ILGYGLDG 315
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW 237
+V LF EM + +P+ TF +++AC HG +++ W
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACA-----------HGGLVEKSW 356
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/590 (27%), Positives = 267/590 (45%), Gaps = 69/590 (11%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A ++ + ++D W ++++ + ++++ F MR +P++F+YSA LS C+
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH-DARKVFDEMADSNEVTWCS 145
FG IH+ + G+ S V N+L+DMY KC +A +VF M N V+W
Sbjct: 338 VRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSW-- 395
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
T+I G G V+ C GL EM + +P+
Sbjct: 396 -----------------------------TTLILGLVDHGFVQDCFGLLMEMVKREVEPN 426
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
T S ++ AC++ R + +H ++++ M V NS++ YA A
Sbjct: 427 VVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYA----- 481
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
WN I MK D +++TS++ + G E+ALS+
Sbjct: 482 ---------WNVI--RSMKRRDN---------------ITYTSLVTRFNELGKHEMALSV 515
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
M + I++D L + A A+L L GK +H ++ G V NSLV+MY+K
Sbjct: 516 INYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSK 575
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
CG LE + F I D+VSWN ++ +G + A+ F EM +PD VTF +
Sbjct: 576 CGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLIL 635
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTS 505
L CS+ L D G +F+ M + + ++H +V +LGR G + EA + +
Sbjct: 636 LSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKP 695
Query: 506 GARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIV 565
A ++ LL AC G+L G + L P Y++L++LY SG+ + A+
Sbjct: 696 NAMI--FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKT 753
Query: 566 RKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIE 615
R M ++ + K G S +E++ V +FVS + + D +N +Y EIE
Sbjct: 754 RNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTR---VDKTNGIY-AEIE 799
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 199/430 (46%), Gaps = 64/430 (14%)
Query: 24 ICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSA 83
I +ARKLFDEM R AW MI+A++ + +LSLF M S + P+ F++S+ + +
Sbjct: 74 IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRS 133
Query: 84 CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
CAG +G +H V+ +G+ + V +SL D+Y KC +
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ------------------- 174
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
F A E+F S+ I+W MI+ + L + EM ++
Sbjct: 175 ------------FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVP 222
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
P+++TF L+ A + + +G +H +I G + +K S++ FY++ DA+ +
Sbjct: 223 PNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
NS G Q FL WTS++ G+ RN + A+
Sbjct: 282 LNSSGE-------------------QDVFL------------WTSVVSGFVRNLRAKEAV 310
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
FL+M +Q +N A+L C+++ L GK +HS I+ G + VGN+LV+MY
Sbjct: 311 GTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMY 370
Query: 384 AKCGDLEGSA-LAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
KC E A F ++ ++VSW +++ HG + L EMV V+P+ VT
Sbjct: 371 MKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTL 430
Query: 443 TGMLMTCSHL 452
+G+L CS L
Sbjct: 431 SGVLRACSKL 440
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/547 (21%), Positives = 245/547 (44%), Gaps = 74/547 (13%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ G+ A +LF + + D+++W MI++ ++++L + M + P+ F++
Sbjct: 170 SKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFV 229
Query: 79 AALSACAGGSHHG--FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
L A S G FG IH+ ++V G ++ + SL+D Y + F +M
Sbjct: 230 KLLGA---SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQ----------FSKME 276
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
D A+ V S E+ W ++++G R + +G F E
Sbjct: 277 D---------------------AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
M QP+ +T+SA+++ C+ R + +G +H IK G+ + +V N+++ Y K C
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMK--C 373
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
+ +E FGA N+VSWT++I+G +
Sbjct: 374 SASEVEASRVFGAM----------------------------VSPNVVSWTTLILGLVDH 405
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G + + ++M + ++ + + VL AC+ L + +H+ ++RR +D + VG
Sbjct: 406 GFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVG 465
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK 436
NSLV+ YA ++ + + +D +++ S++ F G+ A+ + M G++
Sbjct: 466 NSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIR 525
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQS 496
D+++ G + ++LG ++ G S + G S + +VDM + G + +A+
Sbjct: 526 MDQLSLPGFISASANLGALETG-KHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK- 583
Query: 497 LAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGE--YLKTLEPEKEVGYVMLSNLYC 554
K + + + S+ L+ ++G + + S E +K EP+ ++LS C
Sbjct: 584 --KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLS--AC 639
Query: 555 ASGQWKE 561
++G+ +
Sbjct: 640 SNGRLTD 646
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 174/404 (43%), Gaps = 65/404 (16%)
Query: 81 LSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE 140
LS C S G IH V+ G +L + N+L+ +Y K +ARK+FDEM+
Sbjct: 31 LSFCESNSSR-IGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMS---- 85
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCES 200
R AW MI+ + E + L LF+EM S
Sbjct: 86 ---------------------------HRTVFAWTVMISAFTKSQEFASALSLFEEMMAS 118
Query: 201 LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
P+++TFS+++ +C RD+ YG VHG VIK+G+ V +S+ Y+K +A
Sbjct: 119 GTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEA 178
Query: 261 MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGE 320
E+F+S + + +SWT MI
Sbjct: 179 CELFSSL-------------------------------QNADTISWTMMISSLVGARKWR 207
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLV 380
AL + +M + + + +L A + L L GK +HS II RG+ + + SLV
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLV 266
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+ Y++ +E + E+D+ W S++ F + RA EA+ F EM + G++P+
Sbjct: 267 DFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF 326
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
T++ +L CS + +D G S + + G D +VDM
Sbjct: 327 TYSAILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDM 369
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
G +H +I+ GL + L + N+L+++Y K + + F + + + +W M+ AF
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
A+ LF EM+ASG P+E TF+ ++ +C+ L I G G HG
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYG-----------GRVHG-- 148
Query: 477 HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLK 536
V G G SL+ YSK + AC E
Sbjct: 149 ----SVIKTGFEGNSVVGSSLSDLYSKCGQFKE--------AC-------------ELFS 183
Query: 537 TLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGV 574
+L+ + + M+ + + +W+EA EM+ GV
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/628 (25%), Positives = 287/628 (45%), Gaps = 44/628 (7%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+++++F S + R GRI A LF M +D V+WN +I Y+ + ++ LF
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 64 SM-RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYR-SSLPVANSLIDMYGK 121
++ + PDS + + L CA + G IH+ ++ Y V N+LI Y +
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANS-SLFGMALEVFRSMPERVEIAWNTMIAG 180
A F M+ + ++W ++L A+A+S F + + E + +
Sbjct: 379 FGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITL-------- 430
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW--- 237
D T +L+ C + + VHG+ +K+G
Sbjct: 431 ------------------------DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHD 466
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ-VSWNAIIDAHMKLGDTQKAFLAFQ 296
++ N++L YAK A ++F VS+N+++ ++ G A + F
Sbjct: 467 EEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFT 526
Query: 297 QAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAH 356
+ ++ +W+ M+ Y + A+ +F ++ ++ + + +L CA LA L
Sbjct: 527 EMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHL 586
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
+ H IIR GL G +L+++YAKCG L+ + F +DLV + +M+ + +
Sbjct: 587 VRQCHGYIIRGGLGDIRLKG-TLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAV 645
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
HGR EA+ ++ M S +KPD V T ML C H GLI +G + S+ + G+ M+
Sbjct: 646 HGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTME 705
Query: 477 HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLK 536
AC VD++ RGG + +A S + A N + LL AC + + G SV +L
Sbjct: 706 QYACAVDLIARGGRLDDAYSFVTQMPVEPNA--NIWGTLLRACTTYNRMDLGHSVANHLL 763
Query: 537 TLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGN 596
E + +V++SN+Y A +W+ +R M + +KK G SW+E+ FVSG+
Sbjct: 764 QAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGD 823
Query: 597 NSSPYMADISNILYFLEIEMRHTRPINF 624
S P I +++ L ++M+ P+ F
Sbjct: 824 CSHPRRDSIFDLVNALYLQMK--EPVVF 849
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 197/444 (44%), Gaps = 81/444 (18%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS-KPDSFSY 77
A+ R+ +K+F +M D V WN ++T S + ++++ F +M ++ KP S ++
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTF 125
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK--CLKPHDARKVFDEM 135
+ L C G +H+ ++ +G V N+L+ MY K + P DA FD +
Sbjct: 126 AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFP-DAYTAFDGI 184
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
AD + V+W +++ ++ ++ M + FRS CL + K
Sbjct: 185 ADKDVVSWNAIIAGFSENN---MMADAFRSF-----------------------CL-MLK 217
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGC----MVHGFVIKSGW-SSAMEVKNSILSF 250
E E P+ T + ++ C S D C +H +V++ W + + V NS++SF
Sbjct: 218 EPTE----PNYATIANVLPVCA-SMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSF 272
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
Y ++ +A +F G+ + VSWN + I
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVV-------------------------------I 301
Query: 311 VGYTRNGNGELALSMFLDMT-RNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL 369
GY N A +F ++ + + D++ ++L CA L LA GK +HS I+R
Sbjct: 302 AGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS- 360
Query: 370 DKYLF----VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
YL VGN+L++ YA+ GD + AF + KD++SWN++L AF + + +
Sbjct: 361 --YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 426 LFREMVASGVKPDEVTFTGMLMTC 449
L ++ + D VT +L C
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFC 442
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 157/385 (40%), Gaps = 70/385 (18%)
Query: 81 LSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE 140
+ ACA S G +H V G+ + V+ S+++MY KC + D +K+F +M +
Sbjct: 28 VKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDP 87
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM-CE 199
V W N L G+++ R + FK M
Sbjct: 88 VVW--------NIVLTGLSVSCGRET------------------------MRFFKAMHFA 115
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE-CPS 258
+P TF+ ++ C D G +H ++IK+G V N+++S YAK
Sbjct: 116 DEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFP 175
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGN 318
DA F+ + VSWNAI I G++ N
Sbjct: 176 DAYTAFDGIADKDVVSWNAI-------------------------------IAGFSENNM 204
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASL---AILAHGKMVHSCIIRRG-LDKYLF 374
A F M + + + VL CAS+ G+ +HS +++R L ++F
Sbjct: 205 MADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVF 264
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
V NSLV+ Y + G +E +A F + KDLVSWN ++ + + +A LF +V G
Sbjct: 265 VCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG 324
Query: 435 -VKPDEVTFTGMLMTCSHLGLIDEG 458
V PD VT +L C+ L + G
Sbjct: 325 DVSPDSVTIISILPVCAQLTDLASG 349
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 109/252 (43%), Gaps = 32/252 (12%)
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
+ D F ++ AC D+ G +HG V K G + EV S+L+ YAK D
Sbjct: 17 FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQ 76
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
+MF + + V WN ++ T + V R
Sbjct: 77 KMFRQMDSLDPVVWNIVL---------------------------TGLSVSCGRETMRFF 109
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
F D + S ++ VL C L +GK +HS II+ GL+K VGN+LV+
Sbjct: 110 KAMHFADEPKPS----SVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVS 165
Query: 382 MYAKCGDLEGSA-LAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
MYAK G + A AF GI +KD+VSWN+++ F + +A F M+ +P+
Sbjct: 166 MYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYA 225
Query: 441 TFTGMLMTCSHL 452
T +L C+ +
Sbjct: 226 TIANVLPVCASM 237
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
D+ V V+ ACAS++ L G+ +H C+ + G V S++NMYAKC ++ F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 397 CGILEKDLVSWNSMLFAFGLH-GRANEAMCLFREM-VASGVKPDEVTFTGMLMTCSHLG 453
+ D V WN +L + GR E M F+ M A KP VTF +L C LG
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLG 136
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 158/577 (27%), Positives = 269/577 (46%), Gaps = 70/577 (12%)
Query: 18 LARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSY 77
L ++G + +A LFDEMP+RD V+WN MI+ G ++ + +F M+ +P F++
Sbjct: 80 LFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF 139
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
S S H G IH + SG R +L V NS++DMY +
Sbjct: 140 SILASLVTCVRH---GEQIHGNAICSGVSRYNLVVWNSVMDMYRRL-------------- 182
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
+F AL VF +M +R ++WN +I + G E L F
Sbjct: 183 -----------------GVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWL 225
Query: 197 MCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
M E QPD++T S +++ C++ R++ G IK G+ S V + + ++K
Sbjct: 226 MREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNR 285
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
D++++F ++ V N SMI Y+ +
Sbjct: 286 LDDSVKLFRELEKWDSVLCN-------------------------------SMIGSYSWH 314
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
GE AL +F+ S++ D +VL + ++ +L HG VHS +I+ G D V
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVA 373
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS-GV 435
SL+ MY K G ++ + F KDL+ WN+++ + RA E++ +F +++ + +
Sbjct: 374 TSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSL 433
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
KPD VT G+L+ C + G ++EG F SM G++ G +H AC++++L R G + EA+
Sbjct: 434 KPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAK 493
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCA 555
+A K + +E +L A GD +V + + EP+ Y++L +Y
Sbjct: 494 DIADKIPFEPSSHI--WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEM 551
Query: 556 SGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAF 592
+ +W+ + +R M + +K GSS I I + V +F
Sbjct: 552 TWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 194/438 (44%), Gaps = 61/438 (13%)
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P S +S ++ ++HA ++ +G+ + N + +Y K +A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD++ D N +TW L + AL++F MPER ++WNTMI+G G E +
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
+F +M +P ++TFS L + T R +G +HG I SG S
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVTCVR---HGEQIHGNAICSGVSR------------ 166
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
+N V WN+++D + +LG A F D+++VSW +I+
Sbjct: 167 ------------------YNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
+ +GN E+AL F M IQ D V+ C+ L L+ GK + I+ G
Sbjct: 209 SCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMG--- 265
Query: 372 YLFVGNSLV-----NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
F+ NS+V +M++KC L+ S F + + D V NSM+ ++ H +A+ L
Sbjct: 266 --FLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRL 323
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
F + V+PD+ TF+ +L S + L HG D V +V LG
Sbjct: 324 FILAMTQSVRPDKFTFSSVL-----------------SSMNAVMLDHGAD-VHSLVIKLG 365
Query: 487 RGGYVAEAQSLAKKYSKT 504
A A SL + Y KT
Sbjct: 366 FDLDTAVATSLMEMYFKT 383
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 222/464 (47%), Gaps = 33/464 (7%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
AR++FDE+ + V+WN ++ Y +G +++ +F M N +P + + S+ + AC+
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
G VIHA+ V + V+ S+ DMY KC + AR+VFD+ + +W S
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
+ YA S L A E+F MPER ++WN M+ G+ E + L M + + D
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
T ++N C+ D+ G HGF+ + G+ + + V N++L Y K A F
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 267 FGAF-NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
++VSWNA ++ G R G E ALS
Sbjct: 456 MSELRDEVSWNA-------------------------------LLTGVARVGRSEQALSF 484
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
F M + + +L CA++ L GK +H +IR G + + ++V+MY+K
Sbjct: 485 FEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSK 543
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
C + + F +DL+ WNS++ +GR+ E LF + GVKPD VTF G+
Sbjct: 544 CRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGI 603
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGG 489
L C G ++ GF +F SMS+++ +S ++H CM+++ + G
Sbjct: 604 LQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYG 647
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 219/456 (48%), Gaps = 35/456 (7%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F I + + G + AR+LF+EMP+RD +WNA+ITA + G+ + +F M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ S++ L +C +H VV GY ++ + S++D+YGKC D
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
AR+VFDE+ + ++V+ WN ++ + G
Sbjct: 216 ARRVFDEIVNPSDVS-------------------------------WNVIVRRYLEMGFN 244
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
+ + +F +M E +P T S++M AC+ S + G ++H +K + V S+
Sbjct: 245 DEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSV 304
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
Y K + A +F+ + + SW + + + G T++A F P++NIVSW
Sbjct: 305 FDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWN 364
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQ-LDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
+M+ GY + AL FL + R I+ +DN+ +L+ C+ ++ + GK H I R
Sbjct: 365 AMLGGYVHAHEWDEALD-FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE-KDLVSWNSMLFAFGLHGRANEAMC 425
G D + V N+L++MY KCG L+ + + F + E +D VSWN++L GR+ +A+
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
F M KP + T +L C+++ ++ G A
Sbjct: 484 FFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAI 518
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 37/324 (11%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS + A SG AR+LFD MP+R+ V+WNAM+ Y H + ++L MR
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
D+ + L+ C+G S G H + GY +++ VAN+L+DMYGKC A
Sbjct: 393 IDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIW 452
Query: 132 FDEMAD-SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
F +M++ +EV+W N ++ G AR G E
Sbjct: 453 FRQMSELRDEVSW-------------------------------NALLTGVARVGRSEQA 481
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
L F+ M + +P ++T + L+ C + G +HGF+I+ G+ + ++ +++
Sbjct: 482 LSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----VSW 306
Y+K C A+E+F + + WN+II + G +++ F F ++ + V++
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTF 600
Query: 307 TSMIVGYTRNGNGELALSMFLDMT 330
++ R G+ EL F M+
Sbjct: 601 LGILQACIREGHVELGFQYFSSMS 624
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 134/321 (41%), Gaps = 35/321 (10%)
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
AY A E+F MPER +WN +I A+ G + +F+ M + + +
Sbjct: 105 AYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETS 164
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
F+ ++ +C D+ +H V+K G+S ++++ SI+ Y K SDA +F+
Sbjct: 165 FAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIV 224
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
+ VSWN I+ ++++G +A + MF
Sbjct: 225 NPSDVSWNVIVRRYLEMGFNDEAVV-------------------------------MFFK 253
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
M +++ N +V+ AC+ L GK++H+ ++ + V S+ +MY KC
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
LE + F KDL SW S + + + G EA LF M + V++ ML
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI----VSWNAMLGG 369
Query: 449 CSHLGLIDEGFAFFRSMSSEF 469
H DE F M E
Sbjct: 370 YVHAHEWDEALDFLTLMRQEI 390
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
+ +C+S A++ + V S ++ +F+ N + Y KCG ++ + F + E+D
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
SWN+++ A +G ++E +FR M GV+ E +F G+L +C GLI + R
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILD-LRLLR 182
Query: 464 SMSS---EFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
+ ++G S +D +VD+ G+ +++A+ +
Sbjct: 183 QLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 209/427 (48%), Gaps = 4/427 (0%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
A VF + + +N MI ++ G L F M D++T++ L+ +C+
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
D+ +G VHG +I++G+ +++ ++ Y DA ++F+ N V WN +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
I GD ++ F+Q +++IVSW SMI ++ G AL +F +M D
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDE 234
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDK-YLFVGNSLVNMYAKCGDLEGSALAFC 397
VL ASL +L GK +HS GL K ++ VGN+LV+ Y K GDLE + F
Sbjct: 235 ATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFR 294
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG-VKPDEVTFTGMLMTCSHLGLID 456
+ +++VSWN+++ ++G+ + LF M+ G V P+E TF G+L CS+ G ++
Sbjct: 295 KMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVE 354
Query: 457 EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLL 516
G F M F L +H MVD++ R G + EA K + A + LL
Sbjct: 355 RGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM--WGSLL 412
Query: 517 GACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKK 576
AC +HGD+ L +EP YV+LSNLY G+W++ E VR M ++K
Sbjct: 413 SACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Query: 577 VPGSSWI 583
G S I
Sbjct: 473 STGQSTI 479
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 128/255 (50%), Gaps = 1/255 (0%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+A ++F + + + + +NAMI YS +G +SLS F SM+ D ++Y+ L +C+
Sbjct: 54 YANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCS 113
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
S FG +H ++ +G+ + ++++Y + DA+KVFDEM++ N V W
Sbjct: 114 SLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNL 173
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
++ + +S L +F+ M ER ++WN+MI+ ++ G L LF EM + + PD
Sbjct: 174 MIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPD 233
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNSILSFYAKLECPSDAMEMF 264
+ T ++ + G +H SG + + V N+++ FY K A +F
Sbjct: 234 EATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 265 NSFGAFNQVSWNAII 279
N VSWN +I
Sbjct: 294 RKMQRRNVVSWNTLI 308
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 33/251 (13%)
Query: 285 LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
L ++ A F + N++ + +MI Y+ G +LS F M I D +
Sbjct: 49 LSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPL 108
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL 404
L +C+SL+ L GK VH +IR G + + +V +Y G + + F + E+++
Sbjct: 109 LKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNV 168
Query: 405 VSWNSMLFAF--------GLH-----------------------GRANEAMCLFREMVAS 433
V WN M+ F GLH GR EA+ LF EM+
Sbjct: 169 VVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQ 228
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVA-CMVDMLGRGGYVA 492
G PDE T +L + LG++D G + S + GL V +VD + G +
Sbjct: 229 GFDPDEATVVTVLPISASLGVLDTG-KWIHSTAESSGLFKDFITVGNALVDFYCKSGDLE 287
Query: 493 EAQSLAKKYSK 503
A ++ +K +
Sbjct: 288 AATAIFRKMQR 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 129/336 (38%), Gaps = 81/336 (24%)
Query: 21 SGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA 80
SG + LF +M +R V+WN+MI++ S G +++L LF M PD +
Sbjct: 181 SGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV 240
Query: 81 LSACAGGSHHGFGSVIHALVVVSG-YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
L A G IH+ SG ++ + V N+L+D Y K A +F +M N
Sbjct: 241 LPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRN 300
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
V+ WNT+I+G A G+ E + LF M E
Sbjct: 301 VVS-------------------------------WNTLISGSAVNGKGEFGIDLFDAMIE 329
Query: 200 S-LYQPDQWTFSALMNACT-----ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
P++ TF ++ C+ E + L+G M+ F K
Sbjct: 330 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERF---------------------K 368
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP-DKNIVSWTSMIVG 312
LE ++ + A++D + G +AF + P + N W S++
Sbjct: 369 LEARTE--------------HYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSA 414
Query: 313 YTRNGNGELALSMFLDMTR-------NSIQLDNLVA 341
+G+ +LA +++ + N + L NL A
Sbjct: 415 CRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYA 450
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 219/435 (50%), Gaps = 38/435 (8%)
Query: 174 WNTMIAGHARRGEVEACLGLFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
WN +I G + + + M S+ +PD +TF+ + +C + + +HG V
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 233 IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF 292
I+SG+ V S++ Y+ G + A
Sbjct: 134 IRSGFLDDAIVATSLVRCYSAN-------------------------------GSVEIAS 162
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
F + P +++VSW MI ++ G ALSM+ M + D+ A+L +CA ++
Sbjct: 163 KVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVS 222
Query: 353 ILAHGKMVH--SCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSM 410
L G M+H +C IR + +FV N+L++MYAKCG LE + F G+ ++D+++WNSM
Sbjct: 223 ALNMGVMLHRIACDIR--CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSM 280
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFG 470
+ +G+HG EA+ FR+MVASGV+P+ +TF G+L+ CSH GL+ EG F MSS+F
Sbjct: 281 IIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFH 340
Query: 471 LSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSS 530
L+ + H CMVD+ GR G + SL Y+ + + LLG+C H +L G
Sbjct: 341 LTPNVKHYGCMVDLYGRAGQL--ENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEV 398
Query: 531 VGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVT 590
+ L LE YV+++++Y A+ + +RK + ++ VPG SWIEI + V
Sbjct: 399 AMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVH 458
Query: 591 AFVSGNNSSPYMADI 605
FV + P A I
Sbjct: 459 KFVVDDKMHPESAVI 473
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 173/425 (40%), Gaps = 88/425 (20%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEM-PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR 66
+F + +++ +G + HA+ LFD D + WN +I +S+ S+ + M
Sbjct: 39 IFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRML 98
Query: 67 ISN-SKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
+S+ S+PD F+++ AL +C IH V+ SG+ VA SL+ Y
Sbjct: 99 LSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSV 158
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
A KVFDE MP R ++WN MI + G
Sbjct: 159 EIASKVFDE-------------------------------MPVRDLVSWNVMICCFSHVG 187
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
L ++K M D +T AL+++C + G M+H S + V N
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
+++ YAK C S + N+ G FN + +++++
Sbjct: 248 ALIDMYAK--CGS----LENAIGVFNGMR-------------------------KRDVLT 276
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
W SMI+GY +G+G A+S F M + ++ + + +L C+ H ++
Sbjct: 277 WNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS-----------HQGLV 325
Query: 366 RRGLDKYLFVGNS------------LVNMYAKCGDLEGS-ALAFCGILEKDLVSWNSMLF 412
+ G++ + + + +V++Y + G LE S + + +D V W ++L
Sbjct: 326 KEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLG 385
Query: 413 AFGLH 417
+ +H
Sbjct: 386 SCKIH 390
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 5/255 (1%)
Query: 270 FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDM 329
FN + + L Q F F P + W +I G++ + + ++ + M
Sbjct: 40 FNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTS--DWNYLIRGFSNSSSPLNSILFYNRM 97
Query: 330 TRNSIQLDNLVA-GAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
+S+ +L L +C + + +H +IR G V SLV Y+ G
Sbjct: 98 LLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGS 157
Query: 389 LEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
+E ++ F + +DLVSWN M+ F G N+A+ +++ M GV D T +L +
Sbjct: 158 VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSS 217
Query: 449 CSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGAR 508
C+H+ ++ G R ++ + + ++DM + G + A + K
Sbjct: 218 CAHVSALNMGVMLHR-IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLT 276
Query: 509 TNSYEVLLGACHAHG 523
NS + G H HG
Sbjct: 277 WNSMIIGYGV-HGHG 290
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 247/533 (46%), Gaps = 76/533 (14%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G V+HA +V SG +A L+ Y +C K DARKVFDEM
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEM----------------- 77
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
P+R MI AR G + L F+EM + + D + +L
Sbjct: 78 --------------PKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSL 123
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG---- 268
+ A D +G M+H V+K + S + +S++ Y+K +A ++F+ G
Sbjct: 124 LKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDL 183
Query: 269 -AFNQ------------------------------VSWNAIID--AHMKLGDTQKAFLAF 295
FN ++WNA+I +HM+ + L
Sbjct: 184 VVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILEL 243
Query: 296 Q----QAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASL 351
PD +VSWTS+I G N E A F M + + ++ +L AC +L
Sbjct: 244 MCLDGYKPD--VVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 352 AILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSML 411
A + HGK +H + GL+ + FV ++L++MY KCG + + + F +K V++NSM+
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Query: 412 FAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGL 471
F + HG A++A+ LF +M A+G K D +TFT +L CSH GL D G F M +++ +
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRI 421
Query: 472 SHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSV 531
++H ACMVD+LGR G + EA + K + LL AC HG++
Sbjct: 422 VPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFV--WGALLAACRNHGNMELARIA 479
Query: 532 GEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
++L LEPE ++L++LY +G W+ ++K + + ++ GSSW+E
Sbjct: 480 AKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 195/457 (42%), Gaps = 81/457 (17%)
Query: 8 LFQTTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR 66
L + +K+V+ G++ ARK+FDEMP RD MI A + G YQ+SL F M
Sbjct: 50 LTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMY 109
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
K D+F + L A FG +IH LV+ Y S + +SLIDMY K +
Sbjct: 110 KDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVG 169
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMP----ERVEIAWNTMIAGHA 182
+ARKVF ++ + + V + +++ YAN+S AL + + M + I WN +I+G +
Sbjct: 170 NARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFS 229
Query: 183 RRGEVEACLGLFKEMCESLYQPD--QWT---------------FSA-------------- 211
E + + MC Y+PD WT F A
Sbjct: 230 HMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSA 289
Query: 212 ----LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
L+ ACT M +G +HG+ + +G V++++L Y K S+AM
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAM------ 343
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
+ F++ P K V++ SMI Y +G + A+ +F
Sbjct: 344 -------------------------ILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGK-----MVHSCIIRRGLDKYLFVGNSLVNM 382
M +LD+L A+L AC+ + G+ M + I L+ Y +V++
Sbjct: 379 QMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHY----ACMVDL 434
Query: 383 YAKCGDL-EGSALAFCGILEKDLVSWNSMLFAFGLHG 418
+ G L E + +E DL W ++L A HG
Sbjct: 435 LGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 39/256 (15%)
Query: 3 SMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLF 62
S S F +S I ++ G + +ARK+F ++ ++D V +NAMI+ Y++ ++L+L
Sbjct: 147 SYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLV 206
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
M++ KPD +++A +S + + S I L+ + GY+ + S+I
Sbjct: 207 KDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHN 266
Query: 123 LKPHDARKVFDEMAD----SNEVTWCSLLFA--------------------------YAN 152
+ A F +M N T +LL A +
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVR 326
Query: 153 SSLFGM---------ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
S+L M A+ +FR P++ + +N+MI +A G + + LF +M + +
Sbjct: 327 SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEK 386
Query: 204 PDQWTFSALMNACTES 219
D TF+A++ AC+ +
Sbjct: 387 LDHLTFTAILTACSHA 402
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/631 (25%), Positives = 279/631 (44%), Gaps = 95/631 (15%)
Query: 15 IVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR-ISNSKP 72
I+S+ ++ G A +F+E+ RD ++ NA++ ++ G+++++ + M+ + +P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRS-SLPVANSLIDMYGKCLKPHDARKV 131
D + + S C S G +H V +S +L V NS+IDMYGKC A +
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFR--------------------------- 164
F + V+W S++ A++ + A +F+
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSD 511
Query: 165 --------------------------SMPERVEI-AWNTMIAGHARRGEVEACLGLFKEM 197
+M E ++ +WN++I+G A G L F+ M
Sbjct: 512 SLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAM 571
Query: 198 C-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
E + D T ++A +L G HG IKS +++N++++ Y + +
Sbjct: 572 SREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCK- 630
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
D + A F D N+ SW +I ++N
Sbjct: 631 ------------------------------DIESAVKVFGLISDPNLCSWNCVISALSQN 660
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
G +F ++ ++ + + +L A L ++G H +IRRG FV
Sbjct: 661 KAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS 717
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA-SGV 435
+LV+MY+ CG LE F + +WNS++ A G HG +AM LF+E+ + S +
Sbjct: 718 AALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEM 777
Query: 436 KPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
+P++ +F +L CSH G IDEG ++++ M +FG+ +H +VDMLGR G + EA
Sbjct: 778 EPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAY 837
Query: 496 SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCA 555
+ A + LL AC+ HGD G V E L +EP+ Y+ L+N Y
Sbjct: 838 EFITGIGEPQKA--GVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVG 895
Query: 556 SGQWKEAEIVRKEMLDQGVKKVPGSSWIEIR 586
G W+EA +RK + D +KK+PG S I++R
Sbjct: 896 LGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 198/427 (46%), Gaps = 67/427 (15%)
Query: 11 TTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN 69
T+SK+++ R+G + + LFDE+ ++D + WN+MITA + G Y ++ LF M
Sbjct: 124 TSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG 183
Query: 70 SKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
++ DS + A SA + S++H L + +G + N+L+++Y K
Sbjct: 184 NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAK-------- 235
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
E S E VF M R ++WNT++ G
Sbjct: 236 ---GENLSSAEC--------------------VFTHMEHRDIVSWNTIMTKCLANGHPRK 272
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWS--SAMEVKNSI 247
L FK M S + D TFS +++AC+ ++ G +HG VIKSG+S + + V NSI
Sbjct: 273 SLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSI 332
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
+S Y+ K GDT+ A F++ ++++S
Sbjct: 333 ISMYS-------------------------------KCGDTEAAETVFEELVCRDVISSN 361
Query: 308 SMIVGYTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
+++ G+ NG E A + M + + IQ D ++ C L+ G+ VH +R
Sbjct: 362 AILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVR 421
Query: 367 RGLD-KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMC 425
+ + L V NS+++MY KCG + L F +DLVSWNSM+ AF +G ++A
Sbjct: 422 MEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKN 481
Query: 426 LFREMVA 432
LF+E+V+
Sbjct: 482 LFKEVVS 488
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 162/628 (25%), Positives = 251/628 (39%), Gaps = 114/628 (18%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ + A +F M RD V+WN ++T G ++SL F SM S + D+ ++S
Sbjct: 234 AKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFS 293
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGY--RSSLPVANSLIDMYGKCLKPHDARKVFDEMA 136
+SAC+ G +H LV+ SGY + + V NS+I MY KC A VF+E+
Sbjct: 294 CVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELV 353
Query: 137 DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKE 196
C R I+ N ++ G A G E G+ +
Sbjct: 354 -------C------------------------RDVISSNAILNGFAANGMFEEAFGILNQ 382
Query: 197 MCESL--YQPDQWTFSALMNACTESRDMLYGCMVHGFVIK-SGWSSAMEVKNSILSFYAK 253
M +S+ QPD T ++ + C + G VHG+ ++ S A+EV NS++ Y K
Sbjct: 383 M-QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD------------- 300
+ A +F + + VSWN++I A + G T KA F++
Sbjct: 442 CGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVL 501
Query: 301 ---------------KNIVSW--------------------------TSMIVGYTRNGNG 319
K++ W S+I G +G+
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHH 561
Query: 320 ELALSMFLDMTRN-SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR--RGLDKYLFVG 376
+L F M+R I+ D + + A +L ++ G+ H I+ R LD L
Sbjct: 562 LESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL--Q 619
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVK 436
N+L+ MY +C D+E + F I + +L SWN ++ A + E LFR + ++
Sbjct: 620 NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLE 676
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQS 496
P+E+TF G+L + LG G + G A +VDM G +
Sbjct: 677 PNEITFVGLLSASTQLGSTSYGMQAHCHLIRR-GFQANPFVSAALVDMYSSCGMLETGM- 734
Query: 497 LAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTL------EPEKEVGYVMLS 550
K + SG NS AHG G G E K L EP K ++ L
Sbjct: 735 ---KVFRNSGV--NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS-SFISLL 788
Query: 551 NLYCASGQWKEAEIVRKEMLDQ-GVKKV 577
+ SG E K+M ++ GVK V
Sbjct: 789 SACSHSGFIDEGLSYYKQMEEKFGVKPV 816
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 150/341 (43%), Gaps = 34/341 (9%)
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
+F + E+ I WN+MI + G A +GLF EM + D T +A +
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDA 281
M+H I++G + N++++ YAK E S A +F + VSWN I+
Sbjct: 204 SRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTK 263
Query: 282 HMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
+ NG+ +L F MT + + D +
Sbjct: 264 CLA-------------------------------NGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRGL--DKYLFVGNSLVNMYAKCGDLEGSALAFCGI 399
V+ AC+S+ L G+ +H +I+ G + ++ VGNS+++MY+KCGD E + F +
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 400 LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA-SGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ +D++S N++L F +G EA + +M + ++PD T + C L EG
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAK 499
A S ++ + ++DM G+ G +A+ L K
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFK 453
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%)
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
+ G+ + F + +K+++ W SMI +NG A+ +F++M + D+
Sbjct: 134 RTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLL 193
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
A +SL + M+H I GL + N+L+N+YAK +L + F + +D
Sbjct: 194 AASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRD 253
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
+VSWN+++ +G +++ F+ M SG + D VTF+ ++ CS +
Sbjct: 254 IVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSI 302
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%)
Query: 358 KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLH 417
+ VH ++ GL + L + L+ Y + G+L S+ F + EKD++ WNSM+ A +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 418 GRANEAMCLFREMVASGVKPD 438
GR A+ LF EM+ G + D
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFD 187
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/487 (29%), Positives = 232/487 (47%), Gaps = 68/487 (13%)
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEV-EACLGLFKEMCESLYQPDQWTFSALMNACTESR 220
VF +P WN +I G++ + E L + M L +PD++TF +M C+ +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 221 DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL-----------ECPS----------- 258
+ G VHG V++ G+ + V S + FY K E P
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 259 ---------DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
+A MF+ N SWNA++D +K GD A F + P ++I+S+TSM
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 310 I-------------------------------VGYTRNGNGELALSMFLDMTRNSIQLDN 338
I +GY +NG A +F +M +++ D
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL--FVGNSLVNMYAKCGDLEGSALAF 396
+ ++ AC+ + + V S + +R ++K+ +V +L++M AKCG ++ +A F
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQR-MNKFSSHYVVPALIDMNAKCGHMDRAAKLF 363
Query: 397 CGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
+ ++DLVS+ SM+ +HG +EA+ LF +MV G+ PDEV FT +L C L++
Sbjct: 364 EEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE 423
Query: 457 EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLL 516
EG +F M ++ + DH +C+V++L R G + EA L K S A +++ LL
Sbjct: 424 EGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIK--SMPFEAHASAWGSLL 481
Query: 517 GACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKK 576
G C HG+ V +L LEP+ YV+LSN+Y A +W + +R +M + G+ K
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 577 VPGSSWI 583
+ G SWI
Sbjct: 542 ICGRSWI 548
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 199/446 (44%), Gaps = 55/446 (12%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHLGLYQQSLS-LFGSMRISNSKPDSFSYSAALSACAGGS 88
+F+ +P + WN +I YS+ L+ +++S L MR ++PD +++ + C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 89 HHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLF 148
GS +H LV+ G+ + V S +D YGKC ARKVF EM + N V+W +L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
AY S A +F MPER +WN ++ G + G++ LF EM + D +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIIS 240
Query: 209 FSALMNACTESRDML----------------YGCMVHGFVIKSGWSSAMEV------KN- 245
++++++ + DM+ + ++ G+ + A +V KN
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 246 --------SILSFYAKLEC-------PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQK 290
++S +++ C S + N F + V A+ID + K G +
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP--ALIDMNAKCGHMDR 358
Query: 291 AFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACAS 350
A F++ P +++VS+ SM+ G +G G A+ +F M I D + +L C
Sbjct: 359 AAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQ 418
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNS-----LVNMYAKCGDL-EGSALAFCGILEKDL 404
++ G + + ++R+ KY + + +VN+ ++ G L E L E
Sbjct: 419 SRLVEEG-LRYFELMRK---KYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREM 430
+W S+L LHG A + R +
Sbjct: 475 SAWGSLLGGCSLHGNTEIAEVVARHL 500
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 125/315 (39%), Gaps = 67/315 (21%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
TS I A+ G + AR LF+E D AW+A+I Y+ G ++ +F M N K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 72 PDSFSYSAALSACAG-GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
PD F +SAC+ G V L SS V +LIDM KC A K
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
+F+EM + V++CS M+ G A G
Sbjct: 362 LFEEMPQRDLVSYCS-------------------------------MMEGMAIHGCGSEA 390
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG--WSSAMEVKNSIL 248
+ LF++M + PD+ F+ ++ C +SR +++ G + M K SIL
Sbjct: 391 IRLFEKMVDEGIVPDEVAFTVILKVCGQSR-----------LVEEGLRYFELMRKKYSIL 439
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP-DKNIVSWT 307
+ C I++ + G ++A+ + P + + +W
Sbjct: 440 ASPDHYSC---------------------IVNLLSRTGKLKEAYELIKSMPFEAHASAWG 478
Query: 308 SMIVGYTRNGNGELA 322
S++ G + +GN E+A
Sbjct: 479 SLLGGCSLHGNTEIA 493
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 222/476 (46%), Gaps = 53/476 (11%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARR-GEVEACLGLFKEMCES-LYQPDQWTFSALMNAC 216
A VF S+ WNT+I A E L+++M E PD+ TF ++ AC
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKAC 161
Query: 217 TESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWN 276
G VH ++K G+ + V N ++ Y C A ++F+
Sbjct: 162 AYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFD----------- 210
Query: 277 AIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQL 336
+ P++++VSW SMI R G + AL +F +M R S +
Sbjct: 211 --------------------EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEP 249
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRR-----GLDKYLFVGNSLVNMYAKCGDLEG 391
D +VL ACA L L+ G H+ ++R+ +D + V NSL+ MY KCG L
Sbjct: 250 DGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD--VLVKNSLIEMYCKCGSLRM 307
Query: 392 SALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV--ASGVKPDEVTFTGMLMTC 449
+ F G+ ++DL SWN+M+ F HGRA EAM F MV V+P+ VTF G+L+ C
Sbjct: 308 AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIAC 367
Query: 450 SHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGART 509
+H G +++G +F M ++ + ++H C+VD++ R GY+ EA + A
Sbjct: 368 NHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVI 427
Query: 510 NSYEVLLGACHAHG-DLGTGSSVGEYLKTLEPEKEV-------GYVMLSNLYCASGQWKE 561
+ LL AC G + + + + + E YV+LS +Y ++ +W +
Sbjct: 428 --WRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWND 485
Query: 562 AEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
IVRK M + G++K PG S IEI + F +G+ S P I L ++ +R
Sbjct: 486 VGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLR 541
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 176/411 (42%), Gaps = 75/411 (18%)
Query: 14 KIVSLARS-GRICHARKLFDEMPDRDSVAWNAMITAYSH-LGLYQQSLSLFGSM-RISNS 70
KI+ L+ S + +A ++FD + + S WN +I A +H + +++ L+ M S
Sbjct: 88 KILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGES 147
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
PD ++ L ACA G +H +V G+ + V N LI +YG C ARK
Sbjct: 148 SPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARK 207
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
VFDEM + + V+W S++ A + AL++FR M
Sbjct: 208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM------------------------ 243
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
+ ++PD +T ++++AC + G H F+++
Sbjct: 244 --------QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR---------------- 279
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
+C D A + + N++I+ + K G + A FQ +++ SW +MI
Sbjct: 280 ----KCDVDV--------AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMI 327
Query: 311 VGYTRNGNGELALSMFLDMT--RNSIQLDNLVAGAVLHACASLAILAHGK-----MVHSC 363
+G+ +G E A++ F M R +++ +++ +L AC + G+ MV
Sbjct: 328 LGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDY 387
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLFA 413
I L+ Y +V++ A+ G + E + ++ D V W S+L A
Sbjct: 388 CIEPALEHY----GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 3/186 (1%)
Query: 275 WNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN-GNGELALSMFLDM-TRN 332
+ I+ D AF F + + W ++I + E A ++ M R
Sbjct: 86 YGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERG 145
Query: 333 SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGS 392
D VL ACA + + GK VH I++ G ++V N L+++Y CG L+ +
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
F + E+ LVSWNSM+ A G + A+ LFREM S +PD T +L C+ L
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGL 264
Query: 453 GLIDEG 458
G + G
Sbjct: 265 GSLSLG 270
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/558 (26%), Positives = 261/558 (46%), Gaps = 67/558 (12%)
Query: 55 YQQSLSLFGSMRISNS-KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVAN 113
++++ LF + I S K +Y A + AC ++ ++ +G+ + N
Sbjct: 103 FREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMN 162
Query: 114 SLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIA 173
++ M+ KC DAR++FDE+ + N ++ S++ + N FG +E F
Sbjct: 163 RILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVN---FGNYVEAFE--------- 210
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
LFK M E L + TF+ ++ A + G +H +
Sbjct: 211 -------------------LFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCAL 251
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFL 293
K G V N+ +S C +ID + K GD + A
Sbjct: 252 KLGV-----VDNTFVS------C--------------------GLIDMYSKCGDIEDARC 280
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
AF+ P+K V+W ++I GY +G E AL + DM + + +D ++ LA
Sbjct: 281 AFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAK 340
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFA 413
L K H+ +IR G + + +LV+ Y+K G ++ + F + K+++SWN+++
Sbjct: 341 LELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGG 400
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSH 473
+ HGR +A+ LF +M+A+ V P+ VTF +L C++ GL ++G+ F SMS G+
Sbjct: 401 YANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKP 460
Query: 474 GMDHVACMVDMLGRGGYVAEAQSLAKKYS-KTSGARTNSYEVLLGACHAHGDLGTGSSVG 532
H ACM+++LGR G + EA + ++ KT+ N + LL AC +L G V
Sbjct: 461 RAMHYACMIELLGRDGLLDEAIAFIRRAPLKTT---VNMWAALLNACRMQENLELGRVVA 517
Query: 533 EYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAF 592
E L + PEK YV++ N+Y + G+ EA V + + +G+ +P +W+E+ + +F
Sbjct: 518 EKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSF 577
Query: 593 VSGNNSSPYMADISNILY 610
+SG+ Y + +Y
Sbjct: 578 LSGDRFDSYNETVKRQIY 595
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 48/372 (12%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
+ G I AR+LFDE+P+R+ ++ ++I+ + + G Y ++ LF M S ++ +++
Sbjct: 169 VKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFA 228
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
L A AG G +H + G + V+ LIDMY KC DAR F+ M +
Sbjct: 229 VMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPE- 287
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
+ +AWN +IAG+A G E L L +M
Sbjct: 288 ------------------------------KTTVAWNNVIAGYALHGYSEEALCLLYDMR 317
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+S DQ+T S ++ T+ + H +I++G+ S + +++ FY+K
Sbjct: 318 DSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVD 377
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVGYT 314
A +F+ N +SWNA++ + G A F++ N+ V++ +++
Sbjct: 378 TARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI--IRRGLDKY 372
+G E +FL M+ ++ + A+ +AC + +L ++ I IRR K
Sbjct: 438 YSGLSEQGWEIFLSMS----EVHGIKPRAMHYACM-IELLGRDGLLDEAIAFIRRAPLK- 491
Query: 373 LFVGNSLVNMYA 384
+ VNM+A
Sbjct: 492 -----TTVNMWA 498
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S + T+ + ++ GR+ AR +FD++P ++ ++WNA++ Y++ G ++ LF M
Sbjct: 358 SEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Query: 66 RISNSKPDSFSYSAALSACA--GGSHHGF 92
+N P+ ++ A LSACA G S G+
Sbjct: 418 IAANVAPNHVTFLAVLSACAYSGLSEQGW 446
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 207/386 (53%), Gaps = 5/386 (1%)
Query: 227 MVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG 286
++H +SG+ S ++++ YAKL A +F+ + WNA+I + + G
Sbjct: 103 LLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRG 162
Query: 287 DTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN-SIQLDNLVAGAVL 345
D + A F P KN+ SWT++I G+++NGN AL MFL M ++ S++ +++ +VL
Sbjct: 163 DMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVL 222
Query: 346 HACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDL 404
ACA+L L G+ + G ++V N+ + MY+KCG ++ + F + +++L
Sbjct: 223 PACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNL 282
Query: 405 VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRS 464
SWNSM+ + HG+ +EA+ LF +M+ G KPD VTF G+L+ C H G++ +G F+S
Sbjct: 283 CSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKS 342
Query: 465 MSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGD 524
M +S ++H CM+D+LGR G + EA L K A + LLGAC HG+
Sbjct: 343 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVV--WGTLLGACSFHGN 400
Query: 525 LGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSW-I 583
+ E L LEP V++SN+Y A+ +W +RK M + + K G S+ +
Sbjct: 401 VEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFV 460
Query: 584 EIRNVVTAFVSGNNSSPYMADISNIL 609
E+ V F + S P +I +L
Sbjct: 461 EVGVDVHKFTVEDKSHPRSYEIYQVL 486
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 181/426 (42%), Gaps = 45/426 (10%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSL 61
H +R+ + +T + L + +ARKLFD + + +N +I AY +S+ L
Sbjct: 10 HCLRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVL 69
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK 121
+ + +P +++ +A A S ++H+ SG+ S +LI Y K
Sbjct: 70 YNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAK 129
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGH 181
AR+VFDEM+ + W +++ Y A+E+F SMP + +W T+I+G
Sbjct: 130 LGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGF 189
Query: 182 ARRGEVEACLGLFKEMC---ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWS 238
++ G L +F +C + +P+ T +++ AC ++ G + G+ ++G+
Sbjct: 190 SQNGNYSEALKMF--LCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFF 247
Query: 239 SAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQA 298
+ V N+ + Y+K A +F G NQ
Sbjct: 248 DNIYVCNATIEMYSKCGMIDVAKRLFEELG--NQ-------------------------- 279
Query: 299 PDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK 358
+N+ SW SMI +G + AL++F M R + D + +L AC ++ G+
Sbjct: 280 --RNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQ 337
Query: 359 MVHSCI-----IRRGLDKYLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSMLF 412
+ + I L+ Y ++++ + G L E L ++ D V W ++L
Sbjct: 338 ELFKSMEEVHKISPKLEHY----GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLG 393
Query: 413 AFGLHG 418
A HG
Sbjct: 394 ACSFHG 399
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 137/352 (38%), Gaps = 103/352 (29%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F T+ I + A+ G +C AR++FDEM RD WNAMIT Y G + ++ LF SM
Sbjct: 118 FCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 69 NS--------------------------------KPDSFSYSAALSACAGGSHHGFGSVI 96
N KP+ + + L ACA G +
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
+G+ ++ V N+ I+MY KC A+++F+E+ N+ CS
Sbjct: 238 EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG--NQRNLCS----------- 284
Query: 157 GMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNAC 216
WN+MI A G+ + L LF +M +PD TF L+ AC
Sbjct: 285 -----------------WNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLAC 327
Query: 217 TESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVS-- 274
VHG ++ G E+F S +++S
Sbjct: 328 -----------VHGGMVVKG------------------------QELFKSMEEVHKISPK 352
Query: 275 ---WNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGYTRNGNGELA 322
+ +ID ++G Q+A+ + P K + V W +++ + +GN E+A
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/434 (29%), Positives = 214/434 (49%), Gaps = 34/434 (7%)
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
N++I +A E L +F+EM PD+++F+ ++ AC G +HG IK
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLG--DTQKAF 292
SG + + V+N++++ Y + A ++ + + VSWN+++ A+++ G D +A
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 293 L-----------------------------AFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
F P +++VSW +M+ Y G L
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 324 SMFLDMTRNSIQL-DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
+F M +S + D +VL ACASL L+ G+ VH I + G++ F+ +LV+M
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
Y+KCG ++ + F ++D+ +WNS++ +HG +A+ +F EMV G KP+ +TF
Sbjct: 349 YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Query: 443 TGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYS 502
G+L C+H+G++D+ F MSS + + ++H CMVD+LGR G + EA+ L +
Sbjct: 409 IGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Query: 503 KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEA 562
+ E LLGAC G L + L L GY +SNLY + G+W++
Sbjct: 469 ADEASIL--LESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKV 526
Query: 563 EIVRKEMLDQGVKK 576
R+ M + V +
Sbjct: 527 IDGRRNMRAERVNR 540
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 50/384 (13%)
Query: 4 MRSYLFQTT---SKIVSLARSG----RICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQ 56
+++ LF T SK+V+ A + + +A + + + + N++I AY++ +
Sbjct: 63 LKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPE 122
Query: 57 QSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLI 116
+L++F M + PD +S++ L ACA G IH L + SG + + V N+L+
Sbjct: 123 VALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLV 182
Query: 117 DMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNT 176
++YG+ ARKV D M + V+W SLL AY L A +F M ER +WN
Sbjct: 183 NVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNF 242
Query: 177 MIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG 236
MI+G+A G V+ KE+ +S+ D +++A++ A GC
Sbjct: 243 MISGYAAAGLVKEA----KEVFDSMPVRDVVSWNAMVTAYAH-----VGC---------- 283
Query: 237 WSSAMEVKNSILSFYAKLECPS-----DAMEMFNSFGAFNQVSW---------------- 275
++ +EV N +L E P + S G+ +Q W
Sbjct: 284 YNEVLEVFNKMLD--DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFL 341
Query: 276 -NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI 334
A++D + K G KA F+ +++ +W S+I + +G G+ AL +F +M
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 335 QLDNLVAGAVLHACASLAILAHGK 358
+ + + VL AC + +L +
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQAR 425
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F T+ + ++ G+I A ++F RD WN++I+ S GL + +L +F M
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHAL--VVVSGYRSSLPVAN--SLIDMYGKCLK 124
KP+ ++ LSAC +H G L ++ S YR + + ++D+ G+ K
Sbjct: 400 GFKPNGITFIGVLSAC---NHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGK 456
Query: 125 PHDARKVFDEM-ADSNEVTWCSLLFA 149
+A ++ +E+ AD + SLL A
Sbjct: 457 IEEAEELVNEIPADEASILLESLLGA 482
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 132/444 (29%), Positives = 220/444 (49%), Gaps = 35/444 (7%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
A +VF M + WNT+ G+ R L L+K+M + +PD++T+ ++ A ++
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
D G +H V+K G FG V+ +
Sbjct: 122 LGDFSCGFALHAHVVKYG------------------------------FGCLGIVA-TEL 150
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
+ +MK G+ A F+ K++V+W + + + GN +AL F M +++Q D+
Sbjct: 151 VMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
++L AC L L G+ ++ + +D + V N+ ++M+ KCG+ E + + F
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ ++++VSW++M+ + ++G + EA+ LF M G++P+ VTF G+L CSH GL++EG
Sbjct: 271 MKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG 330
Query: 459 FAFFRSM--SSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLL 516
+F M S++ L +H ACMVD+LGR G + EA KK T + LL
Sbjct: 331 KRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPD--TGIWGALL 388
Query: 517 GACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKK 576
GAC H D+ G V + L P+ +V+LSN+Y A+G+W + VR +M G KK
Sbjct: 389 GACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKK 448
Query: 577 VPGSSWIEIRNVVTAFVSGNNSSP 600
V S +E + F G+ S P
Sbjct: 449 VAAYSSVEFEGKIHFFNRGDKSHP 472
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 173/412 (41%), Gaps = 70/412 (16%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T + +L G +C+AR++FDEM WN + Y L +SL L+ MR +
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
PD F+Y + A + G +HA VV G+ VA L+ MY K
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMK---------- 156
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
F +S+ F +F SM + +AWN +A + G L
Sbjct: 157 ----------------FGELSSAEF-----LFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
F +MC Q D +T ++++AC G ++E+ I
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSAC-------------------GQLGSLEIGEEIYDRA 236
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
K E N + NA +D H+K G+T+ A + F++ +N+VSW++MIV
Sbjct: 237 RKEEIDC------------NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIV 284
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
GY NG+ AL++F M ++ + + VL AC+ ++ GK S +++ DK
Sbjct: 285 GYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN-DK 343
Query: 372 YLFVGNS----LVNMYAKCGDLEGSALAFCGIL--EKDLVSWNSMLFAFGLH 417
L +V++ + G LE A F + E D W ++L A +H
Sbjct: 344 NLEPRKEHYACMVDLLGRSGLLE-EAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 31/241 (12%)
Query: 228 VHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGD 287
+H V+++G+S KNS+L+ Q+ N ++ +GD
Sbjct: 30 IHAIVLRTGFSE----KNSLLT----------------------QLLENLVV-----IGD 58
Query: 288 TQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHA 347
A F + I W ++ GY RN +L ++ M ++ D V+ A
Sbjct: 59 MCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKA 118
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSW 407
+ L + G +H+ +++ G V LV MY K G+L + F + KDLV+W
Sbjct: 119 ISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAW 178
Query: 408 NSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
N+ L G + A+ F +M A V+ D T ML C LG ++ G +
Sbjct: 179 NAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 238
Query: 468 E 468
E
Sbjct: 239 E 239
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 203/399 (50%), Gaps = 48/399 (12%)
Query: 223 LYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAH 282
L G +H V K G+++ ++++ S++ FY+ +
Sbjct: 82 LDGRQIHALVRKLGFNAVIQIQTSLVGFYSSV---------------------------- 113
Query: 283 MKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVA 341
GD A F + P+K NIV WT+MI YT N N A+ +F M I+LD ++
Sbjct: 114 ---GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIV 170
Query: 342 GAVLHACASLAILAHGKMVHSCIIRRG--LDKYLFVGNSLVNMYAKCGDLEGSALAFCGI 399
L ACA L + G+ ++S I+R L L + NSL+NMY K G+ E + F
Sbjct: 171 TVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDES 230
Query: 400 LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA------SGVKPDEVTFTGMLMTCSHLG 453
+ KD+ ++ SM+F + L+G+A E++ LF++M + + P++VTF G+LM CSH G
Sbjct: 231 MRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSG 290
Query: 454 LIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYE 513
L++EG F+SM ++ L H CMVD+ R G++ +A + T +
Sbjct: 291 LVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN--TVIWR 348
Query: 514 VLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQG 573
LLGAC HG++ G V + L+ + YV LSN+Y + G W E +R +
Sbjct: 349 TLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK-- 406
Query: 574 VKKVPGSSWIEIRNVVTAFVSG---NNSSPYMADISNIL 609
+++PG SWIE+ +++ FVSG N+ M +IS +L
Sbjct: 407 -RRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVL 444
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 22 GRICHARKLFDEMPDRDSVA-WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA 80
G + +AR++FDE P++ ++ W AMI+AY+ +++ LF M + D + A
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 81 LSACAGGSHHGFGSVIHALVVVSGYRSS--LPVANSLIDMYGKCLKPHDARKVFDEMADS 138
LSACA G I++ + R + L + NSL++MY K + ARK+FDE
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARR--GEVEAC--LGLF 194
+ T+ S++F YA + +LE+F+ M + ++ + +T+I + G + AC GL
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKM-KTIDQSQDTVITPNDVTFIGVLMACSHSGLV 292
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
+E S +M+ + R+ +GCMV F A E N +
Sbjct: 293 EEGKRHFK-------SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQM 338
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 226/482 (46%), Gaps = 37/482 (7%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
+L +FR+ ER N +I G E+ + F M +PD+ TF ++ + ++
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL-----------ECPSD-------- 259
G +H +K+ V+ S++ YAK E P
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 260 ----------------AMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
A +F S N SW+ +I ++ G+ +A F+ P+KN+
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
VSWT++I G+++ G+ E A+S + +M ++ + AVL AC+ L G +H
Sbjct: 259 VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGY 318
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
I+ G+ +G +LV+MYAKCG+L+ +A F + KD++SW +M+ + +HGR ++A
Sbjct: 319 ILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQA 378
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVD 483
+ FR+M+ SG KPDEV F +L C + +D G FF SM ++ + + H +VD
Sbjct: 379 IQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVD 438
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKE 543
+LGR G + EA L + T + L AC AH SV + L L+PE
Sbjct: 439 LLGRAGKLNEAHELVENMPINPDLTT--WAALYRACKAHKGYRRAESVSQNLLELDPELC 496
Query: 544 VGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMA 603
Y+ L + + G ++ E R + + ++ G S+IE+ + F +G+ S
Sbjct: 497 GSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQ 556
Query: 604 DI 605
+I
Sbjct: 557 EI 558
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 175/429 (40%), Gaps = 76/429 (17%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSH 89
+F +R+ NA+I + ++ S+ F M KPD ++ L + +
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 90 HGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE--------------- 134
G +HA + + V SL+DMY K + A +VF+E
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 135 --------------------MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAW 174
M + N +W +L+ Y +S A ++F MPE+ ++W
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
T+I G ++ G+ E + + EM E +P+++T +A+++AC++S + G +HG+++
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLA 294
+G +++ + G A++D + K G+ A
Sbjct: 322 NG------------------------IKLDRAIGT-------ALVDMYAKCGELDCAATV 350
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHAC-----A 349
F K+I+SWT+MI G+ +G A+ F M + + D +V AVL AC
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEV 410
Query: 350 SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWN 408
L + M I L Y+ V V++ + G L E L + DL +W
Sbjct: 411 DLGLNFFDSMRLDYAIEPTLKHYVLV----VDLLGRAGKLNEAHELVENMPINPDLTTWA 466
Query: 409 SMLFAFGLH 417
++ A H
Sbjct: 467 ALYRACKAH 475
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 21 SGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA 80
SG + A++LF+ MP+++ V+W +I +S G Y+ ++S + M KP+ ++ +A
Sbjct: 240 SGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAV 299
Query: 81 LSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE 140
LSAC+ G G IH ++ +G + + +L+DMY KC + A VF M +
Sbjct: 300 LSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDI 359
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLF 194
++W +++ +A F A++ FR M P+ E+ + ++ EV+ L F
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPD--EVVFLAVLTACLNSSEVDLGLNFF 417
Query: 195 KEM 197
M
Sbjct: 418 DSM 420
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G + A +F M +D ++W AMI ++ G + Q++ F M S KPD +
Sbjct: 339 AKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFL 398
Query: 79 AALSACAGGSHHGFG-SVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA- 136
A L+AC S G + ++ + +L ++D+ G+ K ++A ++ + M
Sbjct: 399 AVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI 458
Query: 137 DSNEVTWCSLLFA 149
+ + TW +L A
Sbjct: 459 NPDLTTWAALYRA 471
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 146/545 (26%), Positives = 251/545 (46%), Gaps = 47/545 (8%)
Query: 96 IHALVVVS----GYRSSLPVAN-SLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLL--F 148
+H+L V S + +SL +A +L + +C P M ++ C L+ F
Sbjct: 752 VHSLRVPSHHLRDFSASLSLAPPNLKKIIKQCSTPKLLESALAAMIKTSLNQDCRLMNQF 811
Query: 149 AYANSSL--FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
A +S +A+ M E +N + G L L+ M P
Sbjct: 812 ITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSS 871
Query: 207 WTFSALMNACT-ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
+T+S+L+ A + SR +G + + K G+ ++++ +++ FY+ +A ++F+
Sbjct: 872 YTYSSLVKASSFASR---FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD 928
Query: 266 SFGAFNQVSW-------------------------------NAIIDAHMKLGDTQKAFLA 294
+ ++W N +I+ +M LG+ ++A
Sbjct: 929 EMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESL 988
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
F Q P K+I+SWT+MI GY++N A+++F M I D + V+ ACA L +L
Sbjct: 989 FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 355 AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAF 414
GK VH ++ G +++G++LV+MY+KCG LE + L F + +K+L WNS++
Sbjct: 1049 EIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1108
Query: 415 GLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHG 474
HG A EA+ +F +M VKP+ VTF + C+H GL+DEG +RSM ++ +
Sbjct: 1109 AAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSN 1168
Query: 475 MDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEY 534
++H MV + + G + EA L A + LL C H +L
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVI--WGALLDGCRIHKNLVIAEIAFNK 1226
Query: 535 LKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV-PGSSWIEIRNVVTAFV 593
L LEP Y +L ++Y +W++ +R M + G++K+ PG+S I I F
Sbjct: 1227 LMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFA 1286
Query: 594 SGNNS 598
+ + S
Sbjct: 1287 AADKS 1291
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 183/423 (43%), Gaps = 76/423 (17%)
Query: 33 EMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGF 92
+M + + +NA+ + +SL L+ M + P S++YS+ + A + S F
Sbjct: 830 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASR--F 887
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAY-- 150
G + A + G+ + + +LID Y + +ARKVFDEM + +++ W +++ AY
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 151 ------ANSSLFGM-----------------------ALEVFRSMPERVEIAWNTMIAGH 181
ANS M A +F MP + I+W TMI G+
Sbjct: 948 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 1007
Query: 182 ARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAM 241
++ + +F +M E PD+ T S +++AC + G VH + +++G+
Sbjct: 1008 SQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGF---- 1063
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
+L Y +A++D + K G ++A L F P K
Sbjct: 1064 -----VLDVYIG----------------------SALVDMYSKCGSLERALLVFFNLPKK 1096
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH 361
N+ W S+I G +G + AL MF M S++ + + +V AC ++ G+ ++
Sbjct: 1097 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY 1156
Query: 362 SCIIRRGLDKYLFVGN-----SLVNMYAKCGDLEGSALAFCGIL--EKDLVSWNSMLFAF 414
R +D Y V N +V++++K G L AL G + E + V W ++L
Sbjct: 1157 ----RSMIDDYSIVSNVEHYGGMVHLFSKAG-LIYEALELIGNMEFEPNAVIWGALLDGC 1211
Query: 415 GLH 417
+H
Sbjct: 1212 RIH 1214
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 116/266 (43%), Gaps = 43/266 (16%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
G + A LF++MP +D ++W MI YS Y++++++F M PD + S +
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 82 SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEV 141
SACA G +H + +G+ + + ++L+DMY KC
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC------------------- 1080
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
AL VF ++P++ WN++I G A G + L +F +M
Sbjct: 1081 ------------GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMES 1128
Query: 202 YQPDQWTFSALMNACT------ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+P+ TF ++ ACT E R +Y M+ + I S +E ++ ++K
Sbjct: 1129 VKPNAVTFVSVFTACTHAGLVDEGR-RIYRSMIDDYSIVSN----VEHYGGMVHLFSKAG 1183
Query: 256 CPSDAMEMFNSFG-AFNQVSWNAIID 280
+A+E+ + N V W A++D
Sbjct: 1184 LIYEALELIGNMEFEPNAVIWGALLD 1209
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/575 (26%), Positives = 257/575 (44%), Gaps = 70/575 (12%)
Query: 10 QTTSKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
Q + ++S ++ + A LF EM D+ +V+WN MI AYS GL ++++++F +M
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEK 246
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
N + + LSA H +H LVV G + + V SL+ Y +C A
Sbjct: 247 NVEISPVTIINLLSA------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSA 300
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
+++ + S+ G+ ++++ +A +G+++
Sbjct: 301 ERLYA---------------SAKQDSIVGL----------------TSIVSCYAEKGDMD 329
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
+ F + + + D +++ C +S + G +HG+ IKSG + V N ++
Sbjct: 330 IAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLI 389
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
+ Y+K + + +F +SWN++I ++ G AF F Q
Sbjct: 390 TMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM---------- 439
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
M+ G + ++I + +L+AG C+ L L GK +H +R
Sbjct: 440 MLTG---------------GLLPDAITIASLLAG-----CSQLCCLNLGKELHGYTLRNN 479
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
+ FV +L++MYAKCG+ + F I +WNSM+ + L G + A+ +
Sbjct: 480 FENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYL 539
Query: 429 EMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRG 488
EM G+KPDE+TF G+L C+H G +DEG FR+M EFG+S + H A MV +LGR
Sbjct: 540 EMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRA 599
Query: 489 GYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVM 548
EA L K + + LL AC H +L G V + L+ + YV+
Sbjct: 600 CLFTEALYLIWKMDIKPDSAV--WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVL 657
Query: 549 LSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWI 583
+SNLY W + VR M D G G S I
Sbjct: 658 MSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/513 (24%), Positives = 209/513 (40%), Gaps = 84/513 (16%)
Query: 7 YLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMR 66
+++ TS + + G + A+ LFDEMP+RD+V WNA+I YS G + LF M
Sbjct: 84 FVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVML 143
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
P + + L C G +H + SG V N+LI Y KC +
Sbjct: 144 QQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAE-- 201
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
G A +FR M ++ ++WNTMI +++ G
Sbjct: 202 -----------------------------LGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 232
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
E + +FK M E + T L++A + H V+K G + + V S
Sbjct: 233 QEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISVVTS 286
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
++ Y++ C A ++ S A +IV
Sbjct: 287 LVCAYSRCGCLVSAERLYAS-------------------------------AKQDSIVGL 315
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
TS++ Y G+ ++A+ F + +++D + +LH C + + G +H I+
Sbjct: 316 TSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIK 375
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
GL V N L+ MY+K D+E F + E L+SWNS++ GRA+ A +
Sbjct: 376 SGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEV 435
Query: 427 FREMVAS-GVKPDEVTFTGMLMTCSHLGLID-----EGFAFFRSMSSEFGLSHGMDHVAC 480
F +M+ + G+ PD +T +L CS L ++ G+ + +E + C
Sbjct: 436 FHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENE--------NFVC 487
Query: 481 --MVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
++DM + G +A+S+ K A NS
Sbjct: 488 TALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 520
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 34/265 (12%)
Query: 185 GEVEAC-LGLFKEMCESLYQPDQWTFSALMNACTESRD--MLYGCMVHGFVIKSGWSSAM 241
GE+ + + +F+++ S P+ +T S + A T S + L V + KSG +
Sbjct: 26 GEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFV 85
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
VK S+L+ Y K C + A +F+ + V WNA
Sbjct: 86 YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA------------------------ 121
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVH 361
+I GY+RNG A +F+ M + +L C ++ G+ VH
Sbjct: 122 -------LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVH 174
Query: 362 SCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRAN 421
+ GL+ V N+L++ Y+KC +L + + F + +K VSWN+M+ A+ G
Sbjct: 175 GVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQE 234
Query: 422 EAMCLFREMVASGVKPDEVTFTGML 446
EA+ +F+ M V+ VT +L
Sbjct: 235 EAITVFKNMFEKNVEISPVTIINLL 259
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 126/285 (44%), Gaps = 53/285 (18%)
Query: 318 NGELA---LSMFLDMTRNSIQLDNLVAGAVLHACASL--AILAHGKMVHSCIIRRGLDKY 372
+GE++ +++F D+ R+S+ ++ L A + + + V + + + GLD++
Sbjct: 25 HGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRF 84
Query: 373 LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
++V SL+N+Y K G + + + F + E+D V WN+++ + +G +A LF M+
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVA 492
G P T +L C G + +G RS+ HG+ + G
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQG----RSV-------HGVA---------AKSGLEL 184
Query: 493 EAQ---SLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVML 549
++Q +L YSK A S EVL + ++ + V + +
Sbjct: 185 DSQVKNALISFYSKC--AELGSAEVL-------------------FREMKDKSTVSWNTM 223
Query: 550 SNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVS 594
Y SG +EA V K M ++ V+ P + I N+++A VS
Sbjct: 224 IGAYSQSGLQEEAITVFKNMFEKNVEISP----VTIINLLSAHVS 264
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F T+ I A+ G A +F + + WN+MI+ YS GL ++LS + MR
Sbjct: 485 FVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREK 544
Query: 69 NSKPDSFSYSAALSACAGGSHHGF 92
KPD ++ LSAC +H GF
Sbjct: 545 GLKPDEITFLGVLSAC---NHGGF 565
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 246/497 (49%), Gaps = 40/497 (8%)
Query: 93 GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYAN 152
G IHA ++ +G++ L ++ L+ ++ KC AR+VFDE+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDEL----------------- 95
Query: 153 SSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
P+ A+N MI+G+ + G V+ L L + M S + D +T S +
Sbjct: 96 --------------PKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMV 141
Query: 213 MNAC-TESRDMLYG---C-MVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
+ A + M+ C +VH +IK + +++ Y K A +F +
Sbjct: 142 LKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 268 GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG-NGELALSMF 326
N V ++I +M G + A F K+IV + +M+ G++R+G + ++ M+
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 327 LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC 386
+ M R + +V+ AC+ L G+ VH+ I++ G+ ++ +G+SL++MYAKC
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKC 321
Query: 387 GDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
G + + F + EK++ SW SM+ +G +G EA+ LF M ++P+ VTF G L
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 447 MTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSG 506
CSH GL+D+G+ F SM ++ + M+H AC+VD++GR G + +A A+ +
Sbjct: 382 SACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPD 441
Query: 507 ARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG-YVMLSNLYCASGQWKEAEIV 565
++ + LL +C+ HG++ S L L +K G Y+ LSN+Y ++ +W +
Sbjct: 442 --SDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKI 499
Query: 566 RKEMLDQGVKKVPGSSW 582
R+ M + + K G SW
Sbjct: 500 REVMKRRRISKTIGRSW 516
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 181/408 (44%), Gaps = 41/408 (10%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
+ G + +AR++FDE+P A+N MI+ Y GL ++ L L M S K D ++ S
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 80 ALSAC-AGGS----HHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
L A + GS ++HA ++ + +L+D Y K K AR VF+
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV-EACLGL 193
M D N V S++ Y N A E+F + + + +N M+ G +R GE + + +
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDM 260
Query: 194 FKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAK 253
+ M + + P+ TF++++ AC+ G VH ++KSG + +++ +S+L YAK
Sbjct: 261 YISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAK 320
Query: 254 LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGY 313
+DA +F+ N SW ++ID GY
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMID-------------------------------GY 349
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKY 372
+NGN E AL +F M I+ + + L AC+ ++ G + + R +
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 373 LFVGNSLVNMYAKCGDLEGSALAFCGILEK--DLVSWNSMLFAFGLHG 418
+ +V++ + GDL A F + + D W ++L + LHG
Sbjct: 410 MEHYACIVDLMGRAGDL-NKAFEFARAMPERPDSDIWAALLSSCNLHG 456
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 67/315 (21%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLG-LYQQSLSLFGSMRISNS 70
TS I G + A ++F+ +D V +NAM+ +S G ++S+ ++ SM+ +
Sbjct: 210 TSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGF 269
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
P+ ++++ + AC+ + H G +HA ++ SG + + + +SL+DMY KC +DAR+
Sbjct: 270 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARR 329
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
VFD+M + N +W S++ Y + G E
Sbjct: 330 VFDQMQEKNVFSWTSMIDGYGKN-------------------------------GNPEEA 358
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
L LF M E +P+ TF ++AC+ S G + G+ I E S
Sbjct: 359 LELFTRMKEFRIEPNYVTFLGALSACSHS-----GLVDKGYEI-------FESMQRDYSM 406
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF---LAFQQAPDKNIVSWT 307
K+E + I+D + GD KAF A + PD +I W
Sbjct: 407 KPKME------------------HYACIVDLMGRAGDLNKAFEFARAMPERPDSDI--WA 446
Query: 308 SMIVGYTRNGNGELA 322
+++ +GN ELA
Sbjct: 447 ALLSSCNLHGNVELA 461
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 219/418 (52%), Gaps = 7/418 (1%)
Query: 169 RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMV 228
+ + +NT+I + GE + L LF M S QP+ TF +L+ A S + YG +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 229 HGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDT 288
HG +K G+ V+ S + FY ++ + +MF+ V+ N+++DA + G+
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 289 QKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS---IQLDNLVAGAVL 345
AF FQ+ P ++VSWT++I G+++ G AL +F +M +N I + +VL
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 346 HACASL--AILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
+CA+ + GK +H ++ + + +G +L++MY K GDLE + F I +K
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
+ +WN+++ A +GR +A+ +F M +S V P+ +T +L C+ L+D G F
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
S+ SE+ + +H C+VD++GR G + +A + + A LLGAC H
Sbjct: 349 SICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASV--LGALLGACKIHE 406
Query: 524 DLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSS 581
+ G++VG+ L L+P+ YV LS W EAE +RK M++ G++K+P S
Sbjct: 407 NTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 137/299 (45%), Gaps = 9/299 (3%)
Query: 37 RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVI 96
+ +N +I +Y G Y+ SL+LF M S+ +P++ ++ + + A +G +
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
H + G+ V S + YG+ +RK+FD++ + V SLL A +
Sbjct: 109 HGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEM 168
Query: 157 GMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE---SLYQPDQWTFSALM 213
A E F+ MP ++W T+I G +++G L +F EM + ++ P++ TF +++
Sbjct: 169 DYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVL 228
Query: 214 NACT--ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
++C + + G +HG+V+ + ++L Y K A+ +F+
Sbjct: 229 SSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK 288
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPD----KNIVSWTSMIVGYTRNGNGELALSMF 326
+WNAII A G ++A F+ N ++ +++ R+ +L + +F
Sbjct: 289 VCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 11/189 (5%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK----PDSF 75
R+G + +A + F MP D V+W +I +S GL+ ++L +FG M I N + P+
Sbjct: 164 RNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEM-IQNERAVITPNEA 222
Query: 76 SYSAALSACAGGSHHG--FGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
++ + LS+CA G G IH V+ + + +L+DMYGK A +FD
Sbjct: 223 TFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFD 282
Query: 134 EMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE----IAWNTMIAGHARRGEVEA 189
++ D W +++ A A++ ALE+F M I ++ AR V+
Sbjct: 283 QIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDL 342
Query: 190 CLGLFKEMC 198
+ LF +C
Sbjct: 343 GIQLFSSIC 351
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 270/593 (45%), Gaps = 76/593 (12%)
Query: 39 SVAWNAMITA---YSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSV 95
S +W+ ++ A + +G+ + ++ L KPD+ L +
Sbjct: 21 SNSWSTIVPALARFGSIGVLRAAVELIND----GEKPDASPLVHLLRVSGNYGYVSLCRQ 76
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSL 155
+H V G+ S+ ++NSL+ Y DA KVFDE
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDE--------------------- 115
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
MP+ I+WN++++G+ + G + + LF E+ S P++++F+A + A
Sbjct: 116 ----------MPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSA-MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVS 274
C G +H ++K G + V N ++ Y K DA+ +F + VS
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS 225
Query: 275 WNAI-------------------------------IDAHMKLGDTQKAFLAFQQAPDKNI 303
WNAI IDA +K GD AF P+ N
Sbjct: 226 WNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNS 285
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
SW +++ GY + A F M + ++ D VL A A+LA++ G ++H+C
Sbjct: 286 SSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC 345
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEA 423
+ GLD + V ++L++MY+KCG L+ + L F + K+L+ WN M+ + +G + EA
Sbjct: 346 AHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEA 405
Query: 424 MCLFREMVASG-VKPDEVTFTGMLMTCSHLGL-IDEGFAFFRSMSSEFGLSHGMDHVACM 481
+ LF ++ +KPD TF +L CSH + ++ +F M +E+ + ++H +
Sbjct: 406 IKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSL 465
Query: 482 VDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTL--E 539
+ +G+ G V +A+ + +++ G ++ LLGAC A DL +V + L
Sbjct: 466 IRAMGQRGEVWQAKQVIQEFG--FGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDA 523
Query: 540 PEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAF 592
+ E Y+++SNLY +W+E +RK M + GV K GSSWI+ R +++
Sbjct: 524 DKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 32/303 (10%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A K+FDEMPD D ++WN++++ Y G +Q+ + LF + S+ P+ FS++AAL+ACA
Sbjct: 109 AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACAR 168
Query: 87 GSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW-- 143
G+ IH+ +V G + ++ V N LIDMYGKC DA VF M + + V+W
Sbjct: 169 LHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNA 228
Query: 144 ----CS-------------------------LLFAYANSSLFGMALEVFRSMPERVEIAW 174
CS L+ A+ S F A +V MP +W
Sbjct: 229 IVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSW 288
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
NT++ G+ + F +M S + D+++ S ++ A + +G ++H K
Sbjct: 289 NTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHK 348
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLA 294
G S + V ++++ Y+K A MF + N + WN +I + + GD+ +A
Sbjct: 349 LGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKL 408
Query: 295 FQQ 297
F Q
Sbjct: 409 FNQ 411
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 130/295 (44%), Gaps = 17/295 (5%)
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
SW++++ R G+ + L +++ + + D +L + ++ + +H +
Sbjct: 23 SWSTIVPALARFGSIGV-LRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
+ G + NSL+ Y LE + F + + D++SWNS++ + GR E +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVA-CMVD 483
CLF E+ S V P+E +FT L C+ L L G A S + GL G V C++D
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLG-ACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKE 543
M G+ G++ +A + + T S+ ++ +C +G L G + +
Sbjct: 201 MYGKCGFMDDAVLV---FQHMEEKDTVSWNAIVASCSRNGKLELGL---WFFHQMPNPDT 254
Query: 544 VGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNS 598
V Y L + + SG + A V +M + SSW ++T +V+ S
Sbjct: 255 VTYNELIDAFVKSGDFNNAFQVLSDMPNPN-----SSSW---NTILTGYVNSEKS 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 43/285 (15%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I + +SG +A ++ +MP+ +S +WN ++T Y + ++ F M S + D
Sbjct: 261 IDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDE 320
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+S S L+A A + +GS+IHA G S + VA++LIDMY KC A +F
Sbjct: 321 YSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWT 380
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
M N + W N MI+G+AR G+ + LF
Sbjct: 381 MPRKNLIVW-------------------------------NEMISGYARNGDSIEAIKLF 409
Query: 195 KEM-CESLYQPDQWTFSALMNACTESR---DMLYG---CMVHGFVIKSGWSSAMEVKNSI 247
++ E +PD++TF L+ C+ +++ G M++ + IK ++E S+
Sbjct: 410 NQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK----PSVEHCCSL 465
Query: 248 LSFYAKLECPSDAMEMFNSFG-AFNQVSWNAIIDAHMKLGDTQKA 291
+ + A ++ FG ++ V+W A++ A D + A
Sbjct: 466 IRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAA 510
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 204/400 (51%), Gaps = 1/400 (0%)
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
LG + ++ + PD +TF +L++ ++ + G M HG IK G + V+NS++
Sbjct: 103 LGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHM 162
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
Y A ++F + VSWN+II ++ GD A F + PDKNI+SW MI
Sbjct: 163 YTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMI 222
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLD 370
Y N +++S+F +M R Q + +L+AC A L G+ VH+ +IR L+
Sbjct: 223 SAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLN 282
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
+ + +L++MY KC ++ + F + ++ V+WN M+ A LHGR + LF M
Sbjct: 283 SSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAM 342
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
+ ++PDEVTF G+L C+ GL+ +G +++ M EF + H CM ++ G+
Sbjct: 343 INGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGF 402
Query: 491 VAEAQSLAKKYSKTS-GARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVML 549
EA+ K + + LL + G+ G S+ + L +P Y +L
Sbjct: 403 PEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLL 462
Query: 550 SNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVV 589
N+Y +G+W++ VR+ + ++ + ++PG ++++ +V
Sbjct: 463 MNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 163/378 (43%), Gaps = 44/378 (11%)
Query: 43 NAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVV 102
N + AY +Q+L + + PDS+++ + +S G + H +
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 103 SGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEV 162
G LPV NSL+ MY C A+K+F E+ + V+W S++ + A ++
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 163 FRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM 222
F MP++ I+WN MI+ + + LF+EM + +Q ++ T L+NAC S +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 223 LYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAH 282
G VH +I++ +S++ + +++ Y K + A +F+S N+V+WN +I AH
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 283 MKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAG 342
+G E L +F M ++ D +
Sbjct: 327 -------------------------------CLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 343 AVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN-----SLVNMYAKCGDLEGSALAFC 397
VL CA +++ G+ +S ++ D++ N + N+Y+ G E + A
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMV----DEFQIKPNFGHQWCMANLYSSAGFPEEAEEALK 411
Query: 398 GILEKDL----VSWNSML 411
+ ++D+ W ++L
Sbjct: 412 NLPDEDVTPESTKWANLL 429
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP 72
S I + R+G + A KLFDEMPD++ ++WN MI+AY S+SLF M + +
Sbjct: 189 SIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQG 248
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
+ + L+AC + G +HA ++ + SS+ + +LIDMYGKC + AR++F
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIF 308
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
D ++ N+VT WN MI H G E L
Sbjct: 309 DSLSIRNKVT-------------------------------WNVMILAHCLHGRPEGGLE 337
Query: 193 LFKEMCESLYQPDQWTFSALMNACTES-----RDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
LF+ M + +PD+ TF ++ C + Y MV F IK + + N
Sbjct: 338 LFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN-- 395
Query: 248 LSFYAKLECPSDAMEMFNSF 267
Y+ P +A E +
Sbjct: 396 --LYSSAGFPEEAEEALKNL 413
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/494 (26%), Positives = 233/494 (47%), Gaps = 43/494 (8%)
Query: 11 TTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
S I + + G A ++F + D V+WNA+I A + ++L LF SM
Sbjct: 253 VNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGF 312
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
P+ +Y + L + G IH +++ +G + + + N+LID Y KC D+R
Sbjct: 313 SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRL 372
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
FD + D N V WN +++G+A + + C
Sbjct: 373 CFDYIRDKNIV-------------------------------CWNALLSGYANK-DGPIC 400
Query: 191 LGLFKEMCESLYQPDQWTFSALMNAC--TESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
L LF +M + ++P ++TFS + +C TE + + H +++ G+ V +S++
Sbjct: 401 LSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQL------HSVIVRMGYEDNDYVLSSLM 454
Query: 249 SFYAKLECPSDAMEMFN-SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
YAK + +DA+ + + + G + V N + + + G ++ + VSW
Sbjct: 455 RSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWN 514
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
I +R+ E + +F M +++I+ D ++L C+ L L G +H I +
Sbjct: 515 IAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKT 574
Query: 368 GLD-KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
FV N L++MY KCG + F EK+L++W +++ G+HG EA+
Sbjct: 575 DFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEK 634
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
F+E ++ G KPD V+F +L C H G++ EG F+ M ++G+ MDH C VD+L
Sbjct: 635 FKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLA 693
Query: 487 RGGYVAEAQSLAKK 500
R GY+ EA+ L ++
Sbjct: 694 RNGYLKEAEHLIRE 707
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 200/442 (45%), Gaps = 73/442 (16%)
Query: 13 SKIVSL-ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
+ I+SL + G + A K+FD+MP+R+ V++N +I YS G ++ +F MR
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P+ + S LS CA G+ +H L + G L +A++ + G C
Sbjct: 113 PNQSTVSGLLS-CASLDVRA-GTQLHGLSLKYG----LFMADAFV---GTC--------- 154
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
LL Y L MA +VF MP + WN M++ RG ++ C+
Sbjct: 155 --------------LLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECM 200
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
F+E+ + +F ++ + +D+ +H K G + V NS++S Y
Sbjct: 201 FFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAY 260
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
K A MF G+++ VSWNAII A K + KA F P+
Sbjct: 261 GKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH---------- 310
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
G++ N + +VL + + +L+ G+ +H +I+ G +
Sbjct: 311 GFSPNQGTYV---------------------SVLGVSSLVQLLSCGRQIHGMLIKNGCET 349
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANE----AMCLF 427
+ +GN+L++ YAKCG+LE S L F I +K++V WN++ L G AN+ + LF
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNAL-----LSGYANKDGPICLSLF 404
Query: 428 REMVASGVKPDEVTFTGMLMTC 449
+M+ G +P E TF+ L +C
Sbjct: 405 LQMLQMGFRPTEYTFSTALKSC 426
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 132/590 (22%), Positives = 233/590 (39%), Gaps = 119/590 (20%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPDSFSYSAALSACA 85
A ++F++MP + WN M++ H G ++ + F + R+ S +S S+ L +
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTES-SFLGVLKGVS 226
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
+H G + V NSLI YGKC H A ++F + + V+W +
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
++ A A S AL++F SMPE H + P+
Sbjct: 287 IICATAKSENPLKALKLFVSMPE------------HG-------------------FSPN 315
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
Q T+ +++ + + + G +HG +IK+G + + + N+++ FYAK D+ F+
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD 375
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
N V WNA++ GY N +G + LS+
Sbjct: 376 YIRDKNIVCWNALLS-------------------------------GYA-NKDGPICLSL 403
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
FL M + + L +C + + +HS I+R G + +V +SL+ YAK
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 386 C--------------------------------GDLEGSALAFCGILEKDLVSWNSMLFA 413
G S + + D VSWN + A
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 414 FGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS-SEFGLS 472
E + LF+ M+ S ++PD+ TF +L CS L + G + ++ ++F +
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA 579
Query: 473 HGMDHVAC--MVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSS 530
D C ++DM G+ G + +S+ K + +T ++ L+ H G G
Sbjct: 580 ---DTFVCNVLIDMYGKCGSI---RSVMKVFEETREKNLITWTALISCLGIH---GYGQE 630
Query: 531 VGEYLKT-----LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
E K +P++ V ++ + G KE + ++M D GV+
Sbjct: 631 ALEKFKETLSLGFKPDR-VSFISILTACRHGGMVKEGMGLFQKMKDYGVE 679
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 212/416 (50%), Gaps = 9/416 (2%)
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEMCESLYQP-DQWTFSALMNACTESRDMLYGCMVHG 230
I+ ++ +A +G E L LF +M S P D FS + +C + + G VH
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQK 290
+KS + S V ++L Y K S A ++F+ N V WNA+I + G ++
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 291 A---FLAFQQAPDKNIVSWTSMIVGYTRNGNGEL-ALSMFLDMTRNSIQLDNLVAGAVLH 346
A + A P+++ S+ ++I G +G A+ + M + + + A++
Sbjct: 133 AVELYEAMDVMPNES--SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVS 190
Query: 347 ACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVS 406
AC+++ K +HS R ++ + + + LV Y +CG + L F + ++D+V+
Sbjct: 191 ACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA 250
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS 466
W+S++ A+ LHG A A+ F+EM + V PD++ F +L CSH GL DE +F+ M
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Query: 467 SEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLG 526
++GL DH +C+VD+L R G EA + + + A+T + LLGAC +G++
Sbjct: 311 GDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKT--WGALLGACRNYGEIE 368
Query: 527 TGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSW 582
L +EPE YV+L +Y + G+ +EAE +R +M + GVK PGSSW
Sbjct: 369 LAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 150/302 (49%), Gaps = 17/302 (5%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP-DSFSYSAALSACAGGSHHGFGSVIHA 98
++ +++Y++ G ++Q+L+LF M S + P D+ +S AL +CA G +HA
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 99 LVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGM 158
V S + S+ V +L+DMYGKCL ARK+FDE+ N V W +++ Y +
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 159 ALEVFRS---MPERVEIAWNTMIAG--HARRGEVEACLGLFKEMCESLYQPDQWTFSALM 213
A+E++ + MP E ++N +I G G A + +++M E ++P+ T AL+
Sbjct: 133 AVELYEAMDVMPN--ESSFNAIIKGLVGTEDGSYRA-IEFYRKMIEFRFKPNLITLLALV 189
Query: 214 NACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV 273
+AC+ +H + ++ ++K+ ++ Y + +F+S + V
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 274 SWNAIIDAHMKLGDTQKAFLAFQQ------APDKNIVSWTSMIVGYTRNGNGELALSMFL 327
+W+++I A+ GD + A FQ+ PD +++ +++ + G + AL F
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDD--IAFLNVLKACSHAGLADEALVYFK 307
Query: 328 DM 329
M
Sbjct: 308 RM 309
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 97/334 (29%)
Query: 24 ICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS------------- 70
+ HARKLFDE+P R++V WNAMI+ Y+H G ++++ L+ +M + +
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVG 158
Query: 71 --------------------KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLP 110
KP+ + A +SAC+ IH+ +
Sbjct: 159 TEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ 218
Query: 111 VANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV 170
+ + L++ YG+C + VFD M D + V W SL+ AY
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY-------------------- 258
Query: 171 EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHG 230
A G+ E+ L F+EM + PD F ++ AC+ +
Sbjct: 259 -----------ALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHA----------- 296
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG-AFNQVSWNAIIDAHMKLGDTQ 289
+ + L ++ +++ +G ++ ++ ++D ++G +
Sbjct: 297 -----------GLADEALVYFKRMQ---------GDYGLRASKDHYSCLVDVLSRVGRFE 336
Query: 290 KAFLAFQQAPDKNIVSWTSMIVGYTRN-GNGELA 322
+A+ Q P+K ++G RN G ELA
Sbjct: 337 EAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRN-SIQLDNLVAGAVLHACASLAILAHGKMV 360
++S T + Y GN E AL++FL M + ++ LD V L +CA+ G V
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
H+ ++ FVG +L++MY KC + + F I +++ V WN+M+ + G+
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 421 NEAMCLFREMVASGVKPDEVTFTGML 446
EA+ L+ M V P+E +F ++
Sbjct: 131 KEAVELYEAM---DVMPNESSFNAII 153
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 20 RSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
R G I + + +FD M DRD VAW+++I+AY+ G + +L F M ++ PD ++
Sbjct: 229 RCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLN 288
Query: 80 ALSACAGGSHHGFGSVIHALVVVS------GYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
L AC SH G ALV G R+S + L+D+ + + +A KV
Sbjct: 289 VLKAC---SHAGLAD--EALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQ 343
Query: 134 EMADSNEV-TWCSLLFAYAN 152
M + TW +LL A N
Sbjct: 344 AMPEKPTAKTWGALLGACRN 363
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 214/441 (48%), Gaps = 6/441 (1%)
Query: 149 AYANSSLFGMALEVFRSMPERVEIAWNTMI-AGHARRGEVEACLGLFKEMCESLYQPDQW 207
A A+ + A VFR + +NT+I + F EM PD
Sbjct: 57 ASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFH 116
Query: 208 TFSALMNACTESR--DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
TF + AC + D+ +H ++ G S + N+++ Y+ + A+++F+
Sbjct: 117 TFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFD 176
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
+ V++N +ID +K + +A F P +++VSW S+I GY + + A+ +
Sbjct: 177 ENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKL 236
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
F +M ++ DN+ + L ACA GK +H R+ L F+ LV+ YAK
Sbjct: 237 FDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAK 296
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGM 445
CG ++ + F +K L +WN+M+ +HG + FR+MV+SG+KPD VTF +
Sbjct: 297 CGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISV 356
Query: 446 LMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTS 505
L+ CSH GL+DE F M S + ++ M H CM D+LGR G + EA + ++ K
Sbjct: 357 LVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDG 416
Query: 506 GARTN--SYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAE 563
G R ++ LLG C HG++ +K L PE Y ++ +Y + +W+E
Sbjct: 417 GNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVV 476
Query: 564 IVRKEM-LDQGVKKVPGSSWI 583
VR+ + D+ VKK G S +
Sbjct: 477 KVREIIDRDKKVKKNVGFSKV 497
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 173/431 (40%), Gaps = 61/431 (14%)
Query: 8 LFQTTSKIVSLARSGRIC-HARKLFDEMPDRDSVAWNAMITAYS-HLGLYQQSLSLFGSM 65
LF TS S + S + +A +F + + + +N +I + H S F M
Sbjct: 47 LFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEM 106
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSV--IHALVVVSGYRSSLPVANSLIDMYGKCL 123
R + PD ++ ACA + V +H + G S L N+LI +Y
Sbjct: 107 RRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIA 166
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
A ++FDE + VT+ L+ + A E+F SMP R ++WN++I+G+A+
Sbjct: 167 PIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQ 226
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
+ LF EM +PD + ++AC +S D G +H + + +
Sbjct: 227 MNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFL 286
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
++ FYAK AME+ F+ DK +
Sbjct: 287 ATGLVDFYAKCGFIDTAMEI-------------------------------FELCSDKTL 315
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSC 363
+W +MI G +GNGEL + F M + I+ D + +VL C+ ++ + +
Sbjct: 316 FTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ 375
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE----------KD------LVSW 407
+ + L+ N + Y DL G A G++E KD L++W
Sbjct: 376 M------RSLYDVNREMKHYGCMADLLGRA----GLIEEAAEMIEQMPKDGGNREKLLAW 425
Query: 408 NSMLFAFGLHG 418
+ +L +HG
Sbjct: 426 SGLLGGCRIHG 436
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 88/245 (35%), Gaps = 62/245 (25%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDS-------------------------- 39
S LF + I + I A +LFDE P RD
Sbjct: 150 SDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSM 209
Query: 40 -----VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGS 94
V+WN++I+ Y+ + ++++ LF M KPD+ + + LSACA G
Sbjct: 210 PLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGK 269
Query: 95 VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSS 154
IH +A L+D Y KC
Sbjct: 270 AIHDYTKRKRLFIDSFLATGLVDFYAKC-------------------------------G 298
Query: 155 LFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMN 214
A+E+F ++ WN MI G A G E + F++M S +PD TF +++
Sbjct: 299 FIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLV 358
Query: 215 ACTES 219
C+ S
Sbjct: 359 GCSHS 363
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/335 (35%), Positives = 181/335 (54%), Gaps = 6/335 (1%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDM-TRNSI 334
N II++ MK+G++ A + A D+N+++W MI GY RN E AL +M + I
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 335 QLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
+ + + L ACA L L H K VHS +I G++ + ++LV++YAKCGD+ S
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F + D+ WN+M+ F HG A EA+ +F EM A V PD +TF G+L TCSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEV 514
++EG +F MS F + ++H MVD+LGR G V EA L + S +
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE--SMPIEPDVVIWRS 339
Query: 515 LLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGV 574
LL + + + G ++ L K YV+LSN+Y ++ +W+ A+ VR+ M +G+
Sbjct: 340 LLSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 575 KKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNIL 609
+K G SW+E ++ F +G+ S I +L
Sbjct: 397 RKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVL 431
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 145/345 (42%), Gaps = 52/345 (15%)
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
L +C S+ HA + GY + + S + Y +C + + AR++
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLL------- 88
Query: 140 EVTWCSLLFAYANSSLF----------GMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
+ + SL N +L G+A +V R+ ++ I WN MI G+ R + E
Sbjct: 89 -LWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE 147
Query: 190 CLGLFKEMCE-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
L K M + +P++++F++ + AC D+ + VH +I SG +E+ N+IL
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSG----IEL-NAIL 202
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTS 308
S +A++D + K GD + F ++ W +
Sbjct: 203 S--------------------------SALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR- 367
MI G+ +G A+ +F +M + D++ +L C+ +L GK + RR
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 368 GLDKYLFVGNSLVNMYAKCGDL-EGSALAFCGILEKDLVSWNSML 411
+ L ++V++ + G + E L +E D+V W S+L
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-RISNSKPD 73
I SL + G A+K+ D++ + WN MI Y Y+++L +M ++ KP+
Sbjct: 105 IESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPN 164
Query: 74 SFSYSAALSACA--GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
FS++++L+ACA G HH +H+L++ SG + ++++L+D+Y KC +R+V
Sbjct: 165 KFSFASSLAACARLGDLHHA--KWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM 166
F + ++ W +++ +A L A+ VF M
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM 257
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 17/154 (11%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
A+ G I +R++F + D WNAMIT ++ GL +++ +F M + PDS ++
Sbjct: 211 AKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFL 270
Query: 79 AALSACA-------GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
L+ C+ G + G S ++ + L +++D+ G+ + +A ++
Sbjct: 271 GLLTTCSHCGLLEEGKEYFGLMSRRFSI------QPKLEHYGAMVDLLGRAGRVKEAYEL 324
Query: 132 FDEMA-DSNEVTWCSLLFA---YANSSLFGMALE 161
+ M + + V W SLL + Y N L +A++
Sbjct: 325 IESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQ 358
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 207 bits (528), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 215/448 (47%), Gaps = 38/448 (8%)
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQP-DQWTFSALMNACTESRDMLYGCMVHGFVI 233
NTMI + LF+ + + P + + S + C +S D+L G +HG +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFL 293
G+ S + +++ Y+ E +DA ++F+
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFD---------------------------- 172
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRN---SIQLDNLVAGAVLHACAS 350
+ P ++ VSW + Y RN L +F M + ++ D + L ACA+
Sbjct: 173 ---EIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSM 410
L L GK VH I GL L + N+LV+MY++CG ++ + F G+ E+++VSW ++
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTAL 289
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS-EF 469
+ ++G EA+ F EM+ G+ P+E T TG+L CSH GL+ EG FF M S EF
Sbjct: 290 ISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEF 349
Query: 470 GLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGS 529
+ + H C+VD+LGR + +A SL K S + + LLGAC HGD+ G
Sbjct: 350 KIKPNLHHYGCVVDLLGRARLLDKAYSLIK--SMEMKPDSTIWRTLLGACRVHGDVELGE 407
Query: 530 SVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVV 589
V +L L+ E+ YV+L N Y G+W++ +R M ++ + PG S IE++ V
Sbjct: 408 RVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTV 467
Query: 590 TAFVSGNNSSPYMADISNILYFLEIEMR 617
F+ + S P +I +L + +++
Sbjct: 468 HEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 126/321 (39%), Gaps = 66/321 (20%)
Query: 43 NAMITAYSHLGLYQQSLSLFGSMRISNSKP-DSFSYSAALSACAGGSHHGFGSVIHALVV 101
N MI A+S + LF S+R ++S P + S S AL C G IH +
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALE 161
G+ S + +L+D+Y C DA KVFDE
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDE--------------------------- 173
Query: 162 VFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM---CESLYQPDQWTFSALMNACTE 218
+P+R ++WN + + + R L LF +M + +PD T + AC
Sbjct: 174 ----IPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACAN 229
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
+ +G VH F+ ++G S A+ + N+++S Y++ A ++F N VSW
Sbjct: 230 LGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW--- 286
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
T++I G NG G+ A+ F +M + I +
Sbjct: 287 ----------------------------TALISGLAMNGFGKEAIEAFNEMLKFGISPEE 318
Query: 339 LVAGAVLHACASLAILAHGKM 359
+L AC+ ++A G M
Sbjct: 319 QTLTGLLSACSHSGLVAEGMM 339
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 3/143 (2%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS---KPDSFSYSAALSA 83
A K+FDE+P RD+V+WN + + Y + L LF M+ KPD + AL A
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 84 CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
CA FG +H + +G +L ++N+L+ MY +C A +VF M + N V+W
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSW 286
Query: 144 CSLLFAYANSSLFGMALEVFRSM 166
+L+ A + A+E F M
Sbjct: 287 TALISGLAMNGFGKEAIEAFNEM 309
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 212/427 (49%), Gaps = 38/427 (8%)
Query: 161 EVFRS-MPERVEIA--WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACT 217
++FRS + ++ IA WN ++ + R + ++ M S PD+++ ++ A
Sbjct: 69 DIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAV 128
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
+ D G +H ++ G+ ++ ++ Y K
Sbjct: 129 QIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKA----------------------- 165
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD 337
G+ + A F + P++ + SW ++I G G A+ MF+DM R+ ++ D
Sbjct: 166 --------GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPD 217
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY--LFVGNSLVNMYAKCGDLEGSALA 395
+ +V +C L L+ +H C+++ ++ + + NSL++MY KCG ++ ++
Sbjct: 218 DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHI 277
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
F + ++++VSW+SM+ + +G EA+ FR+M GV+P+++TF G+L C H GL+
Sbjct: 278 FEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLV 337
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVL 515
+EG +F M SEF L G+ H C+VD+L R G + EA+ + ++ + L
Sbjct: 338 EEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMV--WGCL 395
Query: 516 LGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
+G C GD+ V Y+ LEP + YV+L+N+Y G WK+ E VRK M + V
Sbjct: 396 MGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVA 455
Query: 576 KVPGSSW 582
K+P S+
Sbjct: 456 KIPAYSY 462
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 64/311 (20%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
I ++G +ARK+FDE P+R +WNA+I +H G +++ +F M+ S +PD
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGY--RSSLPVANSLIDMYGKCLKPHDARKVF 132
F+ + ++C G +H V+ + +S + + NSLIDMYGKC + A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
+EM N V+W S++ YA + ALE FR M E G
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE----------------------FG 316
Query: 193 LFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
+ +P++ TF +++AC VHG +++ G +++A
Sbjct: 317 V---------RPNKITFVGVLSAC-----------VHGGLVEEG-----------KTYFA 345
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSMIV 311
++ + + +G I+D + G ++A ++ P K N++ W ++
Sbjct: 346 MMKSEFELEPGLSHYG--------CIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
Query: 312 GYTRNGNGELA 322
G + G+ E+A
Sbjct: 398 GCEKFGDVEMA 408
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 140/357 (39%), Gaps = 64/357 (17%)
Query: 5 RSYLFQTT-SKIVSLARSGRICHARKLFDEMPDRDSVA--WNAMITAYSHLGLYQQSLSL 61
R+ L T S SLAR RI H + D+ +A WN ++ +Y ++ +
Sbjct: 46 RNKLLATLLSNCTSLARVRRI-HGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQV 104
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGK 121
+ M S PD +S + A G +H++ V G+ + I +Y K
Sbjct: 105 YLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCK 164
Query: 122 CLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGH 181
+ +ARKVFDE PER +WN +I G
Sbjct: 165 AGEFENARKVFDEN-------------------------------PERKLGSWNAIIGGL 193
Query: 182 ARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAM 241
G + +F +M S +PD +T ++ +C D+ +H V++
Sbjct: 194 NHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQ------- 246
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK 301
AK E SD M + N++ID + K G A F++ +
Sbjct: 247 ----------AKTEEKSDIMML------------NSLIDMYGKCGRMDLASHIFEEMRQR 284
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK 358
N+VSW+SMIVGY NGN AL F M ++ + + VL AC ++ GK
Sbjct: 285 NVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK 341
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGS 64
+S + S I + GR+ A +F+EM R+ V+W++MI Y+ G ++L F
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ 311
Query: 65 MRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVS-GYRSSLPVANSLIDMYGKCL 123
MR +P+ ++ LSAC G G A++ L ++D+ +
Sbjct: 312 MREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDG 371
Query: 124 KPHDARKVFDEMA-DSNEVTWCSLL 147
+ +A+KV +EM N + W L+
Sbjct: 372 QLKEAKKVVEEMPMKPNVMVWGCLM 396
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 267/564 (47%), Gaps = 78/564 (13%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD--SFSYSAALSA 83
HA LFDE+P RD + N+ ++++ G +L+LF ++I + PD S +++ L A
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF--LQIHRASPDLSSHTFTPVLGA 93
Query: 84 CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTW 143
C+ S+ G +HAL++ G + +LIDMY K + + DS
Sbjct: 94 CSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSK----------YGHLVDS----- 138
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
+ VF S+ E+ ++WN +++G R G+ + LG+F M +
Sbjct: 139 ----------------VRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
++T S+++ C + + G VH V+ +G + + +++SFY+ + ++AM++
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKV 241
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
+NS ++ H T + L S+I G RN N + A
Sbjct: 242 YNS------------LNVH-----TDEVML-------------NSLISGCIRNRNYKEA- 270
Query: 324 SMFLDMTRNSIQLDNL-VAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
FL M+R Q N+ V + L C+ + L GK +H +R G + N L++M
Sbjct: 271 --FLLMSR---QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDM 325
Query: 383 YAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV--ASGVKPDEV 440
Y KCG + + F I K +VSW SM+ A+ ++G +A+ +FREM SGV P+ V
Sbjct: 326 YGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSV 385
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
TF ++ C+H GL+ EG F M ++ L G +H C +D+L + G E L ++
Sbjct: 386 TFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVER 445
Query: 501 YSKTSGARTNS--YEVLLGACHAHGDLGTGSSVGEYL-KTLEPEKEVGYVMLSNLYCASG 557
+ + +L AC + DL G V L + PE YV++SN Y A G
Sbjct: 446 MMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMG 505
Query: 558 QWKEAEIVRKEMLDQGVKKVPGSS 581
+W E +R ++ ++G+ K G S
Sbjct: 506 KWDVVEELRGKLKNKGLVKTAGHS 529
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 134/287 (46%), Gaps = 38/287 (13%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ I ++ G + + ++F+ + ++D V+WNA+++ + G +++L +F +M +
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
F+ S+ + CA G +HA+VVV+G R + + ++I Y ++A KV
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKV 241
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR-RGEVEAC 190
++ + + E+ N++I+G R R EA
Sbjct: 242 YNSLNVHTD------------------------------EVMLNSLISGCIRNRNYKEAF 271
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
L + ++ +P+ S+ + C+++ D+ G +H +++G+ S ++ N ++
Sbjct: 272 LLMSRQ------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDM 325
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
Y K A +F + + + VSW ++IDA+ GD KA F++
Sbjct: 326 YGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFRE 372
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 40/226 (17%)
Query: 11 TTSKIVSLARSGRICHARKLFDEM---PDRDSVAW-NAMITAYSHLGLYQQSLSLFGSMR 66
T S +V S +I K M RD V AMI+ YS +GL +++ ++ S+
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 67 I---------------------------SNSKPDSFSYSAALSACAGGSHHGFGSVIHAL 99
+ S +P+ S++L+ C+ S G IH +
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCV 306
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMA 159
+ +G+ S + N L+DMYGKC + AR +F + + V+W S++ AYA + A
Sbjct: 307 ALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKA 366
Query: 160 LEVFRSMPER------VEIAWNTMIAGHARRG---EVEACLGLFKE 196
LE+FR M E + + +I+ A G E + C G+ KE
Sbjct: 367 LEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 230/497 (46%), Gaps = 52/497 (10%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+ R +FD + + N+M +S + + L L+ PD+FS+ + +
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG 117
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE----------- 134
FG + ALV G+ V N ++DMY K ARKVFD+
Sbjct: 118 R-----FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV 172
Query: 135 --------------------MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAW 174
M +++ V+W ++ +A A + F MPE+ ++W
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSW 232
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
N M++G+A+ G E L LF +M +P++ T+ +++AC+ D + + +
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGA-FNQVSWNAIIDAHMKLGDTQKAFL 293
VK ++L +AK A +FN G N V+WNA+I + ++GD A
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 294 AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR-NSIQLDNLVAGAVLHACASLA 352
F P +N+VSW S+I GY NG LA+ F DM + D + +VL AC +A
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 353 ILAHGKMVHSCI---IRRGLDKYLFVG-NSLVNMYAKCGDLEGSALAFCGILEKDLVSWN 408
L G CI IR+ K G SL+ MYA+ G+L + F + E+D+VS+N
Sbjct: 413 DLELG----DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 409 SMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
++ AF +G E + L +M G++PD VT+T +L C+ GL+ EG F+S+ +
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNP 528
Query: 469 FGLSHGMDHVACMVDML 485
DH ACM D+L
Sbjct: 529 LA-----DHYACM-DLL 539
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 177/380 (46%), Gaps = 45/380 (11%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T I A+ + +ARK FD MP++ V+WNAM++ Y+ G + +L LF M +
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P+ ++ +SAC+ + + L+ R + V +L+DM+ KC AR++
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 132 FDEM-ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
F+E+ N VTW +++ Y A ++F +MP+R ++WN++IAG+A G+
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 191 LGLFKEMCE-SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
+ F++M + +PD+ T ++++AC D+ G + ++ K+ ++K
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN------QIK----- 430
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
N + ++I + + G+ +A F + ++++VS+ ++
Sbjct: 431 --------------------LNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
Query: 310 IVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL 369
+ NG+G L++ M I+ D + +VL AC +L G+ + I
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI----- 525
Query: 370 DKYLFVGNSLVNMYAKCGDL 389
N L + YA C DL
Sbjct: 526 ------RNPLADHYA-CMDL 538
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 216/392 (55%), Gaps = 9/392 (2%)
Query: 199 ESLYQPDQWTFSALMNACTESR--DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
+SL D +T+ L+ A + R +L G +HG +K G+ S + V+ +++ Y
Sbjct: 114 KSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGN 173
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
DA ++F+ N V+WN +I LGD +KA ++ P++ +VSWT++I GY R
Sbjct: 174 MIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARV 233
Query: 317 GNGELALSMFLDMTR-NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY-LF 374
+ A+ +F M ++I+ + + A+L A +L L VH+ + +RG +
Sbjct: 234 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 293
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGIL--EKDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
V NSL++ YAKCG ++ + F I K+LVSW +M+ AF +HG EA+ +F++M
Sbjct: 294 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 353
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGF-AFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
G+KP+ VT +L CSH GL +E F FF +M +E+ ++ + H C+VDML R G +
Sbjct: 354 LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRL 413
Query: 492 AEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSN 551
EA+ +A + A + +LLGAC + D V L LE YV++SN
Sbjct: 414 EEAEKIALEIPIEEKAVV--WRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSN 471
Query: 552 LYCASGQWKEAEIVRKEMLDQGVKKVPGSSWI 583
++C +G++ +A+ RK+M +GV K+PG S +
Sbjct: 472 IFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 154/340 (45%), Gaps = 48/340 (14%)
Query: 104 GYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVF 163
G+ S + V +L+ MY DA KVFDEM + N VTW ++ N F AL
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 164 RSMPERVEIAWNTMIAGHARRGEVEACLGLFKEM--CESLYQPDQWTFSALMNACTESRD 221
MP R ++W T+I G+AR + + + LF M C+++ +P++ T A++ A D
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI-KPNEITILAILPAVWNLGD 271
Query: 222 MLYGCMVHGFVIKSGWSSA-MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIID 280
+ VH +V K G+ + V NS++ YAK C A + F
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF---------------- 315
Query: 281 AHMKLGDTQKAFLAFQQAPD--KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
+ P+ KN+VSWT+MI + +G G+ A+SMF DM R ++ +
Sbjct: 316 ---------------IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNR 360
Query: 339 LVAGAVLHACASLAILAH------GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDL-EG 391
+ +VL+AC+ + MV+ I + Y LV+M + G L E
Sbjct: 361 VTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHY----GCLVDMLRRKGRLEEA 416
Query: 392 SALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMV 431
+A +E+ V W +L A ++ A A + R+++
Sbjct: 417 EKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLM 456
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS-KPD 73
I L G A ++MP+R V+W +I Y+ + ++++ LF M ++ KP+
Sbjct: 196 ITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPN 255
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRS-SLPVANSLIDMYGKCLKPHDARKVF 132
+ A L A +HA V G+ + V NSLID Y KC A K F
Sbjct: 256 EITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFF 315
Query: 133 DEMAD--SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWN--TMIA 179
E+ + N V+W +++ A+A + A+ +F+ M ER+ + N TMI+
Sbjct: 316 IEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMIS 365
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 224/470 (47%), Gaps = 43/470 (9%)
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC---ESLYQPDQWTFSAL 212
F A +F S+ ++TMI +R + L F M E P TF L
Sbjct: 63 FHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFL 122
Query: 213 MNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
+ AC ++ G +H +V+K+G + S V+ +L Y + + DA ++F+
Sbjct: 123 IVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFD------ 176
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR 331
+ P ++V W ++ GY R G G L +F +M
Sbjct: 177 -------------------------EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV 211
Query: 332 NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR-RGLDKYLFVGNSLVNMYAKCGDLE 390
I+ D L ACA + LA GK +H + + R ++ +FVG +LV+MYAKCG +E
Sbjct: 212 RGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIE 271
Query: 391 GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM-CLFREMVASGVKPDEVTFTGMLMTC 449
+ F + +++ SW +++ + +G A +A CL R G+KPD V G+L C
Sbjct: 272 TAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAAC 331
Query: 450 SHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGART 509
+H G ++EG +M + +G++ +H +C+VD++ R G + +A L +K A
Sbjct: 332 AHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLA-- 389
Query: 510 NSYEVLLGACHAHGDLGTGSSVGEYLKTLEP----EKEVGYVMLSNLYCASGQWKEAEIV 565
+ + LL C H ++ G + L LE E+E V LSN+Y + + EA V
Sbjct: 390 SVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKV 449
Query: 566 RKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIE 615
R + +G++K PG S +E+ +VT FVSG+ S P + I +++ L ++
Sbjct: 450 RGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVD 499
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 69/316 (21%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
ARK+FDE+P D V W+ ++ Y GL + L +F M + +PD FS + AL+ACA
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 87 GSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G IH V + S + V +L+DMY KC A +VF+++ N +W +
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ YA G+A++ CL + E +PD
Sbjct: 291 LIGGYAAY--------------------------GYAKKA--TTCLDRIER--EDGIKPD 320
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWS--SAMEVKNSILSFYAKLECPSDAMEM 263
++ AC HG ++ G + ME + I + C
Sbjct: 321 SVVLLGVLAACA-----------HGGFLEEGRTMLENMEARYGITPKHEHYSC------- 362
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS-WTSMIVGYTRNGN---G 319
I+D + G A ++ P K + S W +++ G + N G
Sbjct: 363 --------------IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 320 ELALSMFLDMTRNSIQ 335
ELA+ LD+ + +++
Sbjct: 409 ELAVQNLLDLEKGNVE 424
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 113/273 (41%), Gaps = 40/273 (14%)
Query: 26 HARKLFDEMPDRDSVAWNAMI-----TAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAA 80
+A +FD + +S ++ MI ++ HLGL + L + P ++
Sbjct: 65 YASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGL--RYFLLMVKEEEEDITPSYLTFHFL 122
Query: 81 LSACAGGSHHGFGSVIHALVVVSG-YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
+ AC G IH VV +G + S V ++ +Y + DARKVFDE+
Sbjct: 123 IVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEI---- 178
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE 199
P+ + W+ ++ G+ R G L +FKEM
Sbjct: 179 ---------------------------PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV 211
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW-SSAMEVKNSILSFYAKLECPS 258
+PD+++ + + AC + + G +H FV K W S + V +++ YAK C
Sbjct: 212 RGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIE 271
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKA 291
A+E+F N SW A+I + G +KA
Sbjct: 272 TAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKA 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 132/302 (43%), Gaps = 16/302 (5%)
Query: 271 NQVSWNAIIDAHMKLGDTQKAFL----AFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF 326
N + + ++ A + L + K F F N + +MI +R+ L L F
Sbjct: 42 NTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYF 101
Query: 327 LDMTRNS---IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL---DKYLFVGNSLV 380
L M + I L ++ AC + GK +H +++ G+ D ++ G ++
Sbjct: 102 LLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTG--VL 159
Query: 381 NMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+Y + L + F I + D+V W+ ++ + G +E + +F+EM+ G++PDE
Sbjct: 160 RIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEF 219
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
+ T L C+ +G + +G + + + + +VDM + G + A + +K
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEK 279
Query: 501 YSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNL-YCASGQW 559
++ + S+ L+G A+G ++ + ++ + K V+L L CA G +
Sbjct: 280 LTRRN---VFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGF 336
Query: 560 KE 561
E
Sbjct: 337 LE 338
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 208/441 (47%), Gaps = 46/441 (10%)
Query: 163 FRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM 222
F+ +R + + G G ++ +GL + S Q + T++ L+ C + ++
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 223 LYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAH 282
G +H + G++ +K +L YA
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALS---------------------------- 156
Query: 283 MKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAG 342
GD Q A + F+ ++++ W +MI GY + G + L ++ DM +N I D
Sbjct: 157 ---GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFA 213
Query: 343 AVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK 402
+V AC++L L HGK H+ +I+R + + V ++LV+MY KC F + +
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR 273
Query: 403 DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFF 462
++++W S++ +G HG+ +E + F +M G +P+ VTF +L C+H GL+D+G+ F
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHF 333
Query: 463 RSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA-----QSLAKKYSKTSGARTNSYEVLLG 517
SM ++G+ H A MVD LGR G + EA +S K++ G+ LLG
Sbjct: 334 YSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGS-------LLG 386
Query: 518 ACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV 577
AC HG++ L+P YV+ +N Y + G + A VR++M + GVKK
Sbjct: 387 ACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD 446
Query: 578 PGSSWIEIRNVVTAFVSGNNS 598
PG S IE++ V F+ + S
Sbjct: 447 PGYSQIELQGEVHRFMKDDTS 467
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 67/320 (20%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
++ A SG + A LF + RD + WNAMI+ Y GL Q+ L ++ MR + PD
Sbjct: 150 LILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQ 209
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
+++++ AC+ G HA+++ +S++ V ++L+DMY KC D +VFD+
Sbjct: 210 YTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQ 269
Query: 135 MADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLF 194
++ N +TW SL I+G+ G+V L F
Sbjct: 270 LSTRNVITWTSL-------------------------------ISGYGYHGKVSEVLKCF 298
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
++M E +P+ TF ++ AC HG ++ GW FY+
Sbjct: 299 EKMKEEGCRPNPVTFLVVLTACN-----------HGGLVDKGWE----------HFYS-- 335
Query: 255 ECPSDAMEMFNSFGAFNQ-VSWNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSMIVG 312
M +G + + A++D + G Q+A+ ++P K + W S++
Sbjct: 336 --------MKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGA 387
Query: 313 YTRNGNG---ELALSMFLDM 329
+GN ELA + FL++
Sbjct: 388 CRIHGNVKLLELAATKFLEL 407
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 11/308 (3%)
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
NE LL YA S A +FRS+ R I WN MI+G+ ++G + L ++ +M
Sbjct: 142 NEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMR 201
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
++ PDQ+TF+++ AC+ + +G H +IK S + V ++++ Y K S
Sbjct: 202 QNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFS 261
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGYT 314
D +F+ N ++W ++I + G + F++ ++ N V++ ++
Sbjct: 262 DGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACN 321
Query: 315 RNGNGELALSMFLDMTRN-SIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
G + F M R+ I+ + A++ L + +++ ++
Sbjct: 322 HGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEA---YEFVMKSPCKEHP 378
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKDLVS-WNSMLFAFGLH--GRANEAMCLFREM 430
V SL+ G+++ LA LE D + N ++FA G G A + R+M
Sbjct: 379 PVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKM 438
Query: 431 VASGVKPD 438
+GVK D
Sbjct: 439 ENAGVKKD 446
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 224/470 (47%), Gaps = 43/470 (9%)
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC---ESLYQPDQWTFSAL 212
F A +F S+ ++TMI +R + L F M E P TF L
Sbjct: 63 FHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFL 122
Query: 213 MNACTESRDMLYGCMVHGFVIKSG-WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
+ AC ++ G +H +V+K+G + S V+ +L Y + + DA ++F+
Sbjct: 123 IVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFD------ 176
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR 331
+ P ++V W ++ GY R G G L +F +M
Sbjct: 177 -------------------------EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLV 211
Query: 332 NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG-LDKYLFVGNSLVNMYAKCGDLE 390
++ D L ACA + LA GK +H + ++ ++ +FVG +LV+MYAKCG +E
Sbjct: 212 KGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIE 271
Query: 391 GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM-CLFREMVASGVKPDEVTFTGMLMTC 449
+ F + +++ SW +++ + +G A +AM CL R G+KPD V G+L C
Sbjct: 272 TAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAAC 331
Query: 450 SHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGART 509
+H G ++EG + +M + + ++ +H +C+VD++ R G + +A +L +K A
Sbjct: 332 AHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASV 391
Query: 510 NSYEVLLGACHAHGDLGTGSSVGEYLKTLEP----EKEVGYVMLSNLYCASGQWKEAEIV 565
+ LL C H ++ G + L LE E+E V LSN+Y + + EA V
Sbjct: 392 --WGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKV 449
Query: 566 RKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIE 615
R + +GV+K PG S +E+ VT FVSG+ S P + I +++ L ++
Sbjct: 450 RGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSVD 499
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 126/316 (39%), Gaps = 69/316 (21%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
ARK+FDE+P D V W+ ++ Y GL + L +F M + +PD FS + AL+ACA
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 87 GSHHGFGSVIHALVVVSGY-RSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G IH V + S + V +L+DMY KC A +VF ++ N +W +
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L+ YA +G A + + ER+E E +PD
Sbjct: 291 LIGGYAA---YGYAKKAMTCL-ERLER--------------------------EDGIKPD 320
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWS--SAMEVKNSILSFYAKLECPSDAMEM 263
++ AC HG ++ G S ME + I + C
Sbjct: 321 SVVLLGVLAACA-----------HGGFLEEGRSMLENMEARYEITPKHEHYSC------- 362
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS-WTSMIVGYTRNGN---G 319
I+D + G A ++ P K + S W +++ G + N G
Sbjct: 363 --------------IVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 320 ELALSMFLDMTRNSIQ 335
ELA+ LD+ + +++
Sbjct: 409 ELAVKNLLDLEKGNVE 424
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 17/288 (5%)
Query: 37 RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVI 96
R++ A + ++TA+ HL + S+ S P+SF Y + C+ S G
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKP---------H---DARKVFDEMADSNEVTWC 144
L+V P + + CLK H VF ++DS+ T
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVF--LSDSHVQT-- 156
Query: 145 SLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQP 204
+L Y L A +VF +P+ + W+ ++ G+ R G L +F+EM +P
Sbjct: 157 GVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEP 216
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGW-SSAMEVKNSILSFYAKLECPSDAMEM 263
D+++ + + AC + + G +H FV K W S + V +++ YAK C A+E+
Sbjct: 217 DEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
F N SW A+I + G +KA ++ ++ + S+++
Sbjct: 277 FKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVL 324
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 231/488 (47%), Gaps = 79/488 (16%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGS-----MRISN 69
I S R G + +ARK+FD MP++++V W AMI Y GL ++ +LF +R +N
Sbjct: 124 ISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTN 183
Query: 70 SKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
+ + L+ C+ + G +H +V G +L V +SL+ Y +C
Sbjct: 184 ER----MFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQC------- 231
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEA 189
E+T AL F M E+ I+W +I+ +R+G
Sbjct: 232 ---------GELT---------------SALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
+G+F M + P+++T +++ AC+E + + +G VH V+K + + V S++
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
YAK SD ++F+ ++N V+WTS+
Sbjct: 328 MYAKCGEISDCRKVFDGMS-------------------------------NRNTVTWTSI 356
Query: 310 IVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGL 369
I + R G GE A+S+F M R + +NL ++L AC S+ L GK +H+ II+ +
Sbjct: 357 IAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSI 416
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFRE 429
+K +++G++LV +Y KCG+ + + +D+VSW +M+ G +EA+ +E
Sbjct: 417 EKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKE 476
Query: 430 MVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV---ACMVDMLG 486
M+ GV+P+ T++ L C++ E RS+ S +H + +V + ++ M
Sbjct: 477 MIQEGVEPNPFTYSSALKACAN----SESLLIGRSIHSIAKKNHALSNVFVGSALIHMYA 532
Query: 487 RGGYVAEA 494
+ G+V+EA
Sbjct: 533 KCGFVSEA 540
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 206/447 (46%), Gaps = 62/447 (13%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
L +S + A+ G + A + FD M ++D ++W A+I+A S G +++ +F M
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
P+ F+ + L AC+ FG +H+LVV ++ + V SL+DMY KC + D
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
RKVFD M++ N VT W ++IA HAR G
Sbjct: 338 CRKVFDGMSNRNTVT-------------------------------WTSIIAAHAREGFG 366
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
E + LF+ M + T +++ AC +L G +H +IK+ + + +++
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 426
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWT 307
+ Y K G+++ AF QQ P +++VSWT
Sbjct: 427 VWLYCKC-------------------------------GESRDAFNVLQQLPSRDVVSWT 455
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
+MI G + G+ AL +M + ++ + + L ACA+ L G+ +HS +
Sbjct: 456 AMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLF 427
+FVG++L++MYAKCG + + F + EK+LVSW +M+ + +G EA+ L
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLM 575
Query: 428 REMVASGVKPDEVTFTGMLMTCSHLGL 454
M A G + D+ F +L TC + L
Sbjct: 576 YRMEAEGFEVDDYIFATILSTCGDIEL 602
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 151/350 (43%), Gaps = 62/350 (17%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFG 63
+++ +F TS + A+ G I RK+FD M +R++V W ++I A++ G ++++SLF
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCL 123
M+ + ++ + + L AC G +HA ++ + ++ + ++L+ +Y KC
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCG 434
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
+ DA V + +P R ++W MI+G +
Sbjct: 435 ESRDA-------------------------------FNVLQQLPSRDVVSWTAMISGCSS 463
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G L KEM + +P+ +T+S+ + AC S +L G +H K+ S + V
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
++++ YAK S+A +F+S N VSW A
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA-------------------------- 557
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
MI+GY RNG AL + M ++D+ + +L C + +
Sbjct: 558 -----MIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL 602
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N +I + ++LGD A F P+KN V+WT+MI GY + G + A ++F D ++ I+
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 336 LDN-LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSAL 394
N + +L+ C+ A G+ VH +++ G+ L V +SLV YA+CG+L +
Sbjct: 181 FTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN-LIVESSLVYFYAQCGELTSALR 239
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSH 451
AF + EKD++SW +++ A G +A+ +F M+ P+E T +L CS
Sbjct: 240 AFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 358 KMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLH 417
K +H+ ++ D+ ++ GN+L++ + GDL + F + EK+ V+W +M+ + +
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 418 GRANEAMCLFREMVASGVK-PDEVTFTGMLMTCSH 451
G +EA LF + V G++ +E F +L CS
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSR 196
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 208/448 (46%), Gaps = 39/448 (8%)
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
WN + G++ + ++ EM +P++ TF L+ AC + G + V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 233 IKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF 292
+K G+ + V N+++ Y + SDA ++F+ N VSWN+I+ A
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTA----------- 188
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
NG L F +M D +L AC
Sbjct: 189 --------------------LVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--G 226
Query: 353 ILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLF 412
L+ GK+VHS ++ R L+ +G +LV+MYAK G LE + L F +++K++ +W++M+
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 413 AFGLHGRANEAMCLFREMVA-SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGL 471
+G A EA+ LF +M+ S V+P+ VTF G+L CSH GL+D+G+ +F M +
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 472 SHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGAC---HAHGDLGTG 528
M H MVD+LGR G + EA KK A + LL AC H D G G
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVV--WRTLLSACSIHHDEDDEGIG 404
Query: 529 SSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNV 588
V + L LEP++ V+++N + + W EA VR+ M + +KK+ G S +E+
Sbjct: 405 EKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGS 464
Query: 589 VTAFVSGNNSSPYMADISNILYFLEIEM 616
F SG + I +L + ++
Sbjct: 465 FHRFFSGYDPRSEYVSIYELLDLFKFQL 492
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 169/416 (40%), Gaps = 69/416 (16%)
Query: 6 SYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
S++ ++ SL+ + + AR L D WN + YS +S+ ++ M
Sbjct: 45 SFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEM 104
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
+ KP+ ++ L ACA G I V+ G+ + V N+LI +YG C K
Sbjct: 105 KRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKT 164
Query: 126 HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRG 185
DARKVFDEM + N V+W S++ A + + E F
Sbjct: 165 SDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECF---------------------- 202
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
C + K C PD+ T L++AC ++ G +VH V+
Sbjct: 203 ----CEMIGKRFC-----PDETTMVVLLSAC--GGNLSLGKLVHSQVM------------ 239
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
+E+ G A++D + K G + A L F++ DKN+ +
Sbjct: 240 ------------VRELELNCRLG-------TALVDMYAKSGGLEYARLVFERMVDKNVWT 280
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAG-AVLHACASLAILAHG-KMVHSC 363
W++MIVG + G E AL +F M + S N V VL AC+ ++ G K H
Sbjct: 281 WSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEM 340
Query: 364 IIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL--EKDLVSWNSMLFAFGLH 417
+ + ++V++ + G L A F + E D V W ++L A +H
Sbjct: 341 EKIHKIKPMMIHYGAMVDILGRAGRL-NEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 29/281 (10%)
Query: 297 QAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAH 356
+ D +W + GY+ + + ++ ++ +M R I+ + L +L ACAS L
Sbjct: 72 HSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTA 131
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGL 416
G+ + +++ G D ++VGN+L+++Y C + F + E+++VSWNS++ A
Sbjct: 132 GRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVE 191
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS---HLGLIDEGFAFFRSMS------- 466
+G+ N F EM+ PDE T +L C LG + R +
Sbjct: 192 NGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGT 251
Query: 467 ---SEFGLSHGMDHV---------------ACMVDMLGRGGYVAEAQSLAKKYSKTSGAR 508
+ S G+++ + M+ L + G+ EA L K K S R
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 509 TNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVML 549
N Y LG A G +Y +E ++ +M+
Sbjct: 312 PN-YVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMI 351
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 224/501 (44%), Gaps = 66/501 (13%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F TS + + G++ AR++FDE+ +RD V W AMI +H ++L LF +M I
Sbjct: 249 VFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTM-I 307
Query: 68 SNSK--PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANS-LIDMYGKCLK 124
S K P+S + L G +HA V+ S P +S LID+Y KC
Sbjct: 308 SEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
Query: 125 PHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARR 184
R+VF Y + +R I+W +++G+A
Sbjct: 368 MASGRRVF-----------------YGSK--------------QRNAISWTALMSGYAAN 396
Query: 185 GEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVK 244
G + L M + ++PD T + ++ C E R + G +H + +K+ + + +
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
S++ Y+K P + +F+ +N+
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRL-------------------------------EQRNVK 485
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
+WT+MI Y N + + +F M + + D++ G VL C+ L L GK +H I
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHI 545
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
+++ + FV ++ MY KCGDL + +F + K ++W +++ A+G + +A+
Sbjct: 546 LKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAI 605
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
F +MV+ G P+ TFT +L CS G +DE + FF M + L +H + ++++
Sbjct: 606 NCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIEL 665
Query: 485 LGRGGYVAEAQSLAKKYSKTS 505
L R G V EAQ LA S +S
Sbjct: 666 LNRCGRVEEAQRLAVMSSSSS 686
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 186/441 (42%), Gaps = 66/441 (14%)
Query: 22 GRICHARKLFDEMPDRDSVAWNAMI--TAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSA 79
G + A+K+FDE + +WNA++ T S YQ LS F MR + +S S
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 80 ALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSN 139
+ AG S G HAL + +G +S+ + SL+DMY KC K AR+VFDE+ + +
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 140 EVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC- 198
V W MIAG A LGLF+ M
Sbjct: 280 IVVW-------------------------------GAMIAGLAHNKRQWEALGLFRTMIS 308
Query: 199 -ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
E +Y P+ + ++ + + + G VH V+KS KN + +
Sbjct: 309 EEKIY-PNSVILTTILPVLGDVKALKLGKEVHAHVLKS--------KNYVEQPFVH---- 355
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNG 317
+ +ID + K GD F + +N +SWT+++ GY NG
Sbjct: 356 ------------------SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANG 397
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
+ AL + M + + D + VL CA L + GK +H ++ + +
Sbjct: 398 RFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT 457
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
SL+ MY+KCG E F + ++++ +W +M+ + + + +FR M+ S +P
Sbjct: 458 SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRP 517
Query: 438 DEVTFTGMLMTCSHLGLIDEG 458
D VT +L CS L + G
Sbjct: 518 DSVTMGRVLTVCSDLKALKLG 538
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 165/388 (42%), Gaps = 62/388 (15%)
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
++ ++SA L AC G +H + ++G S+ + L+ MY C DA+KVF
Sbjct: 110 NATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVF 169
Query: 133 DEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLG 192
DE SN +W +LL T+I+G R +V L
Sbjct: 170 DESTSSNVYSWNALL--------------------------RGTVISGKKRYQDV---LS 200
Query: 193 LFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
F EM E + ++ S + + + + G H IK+G
Sbjct: 201 TFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNG---------------- 244
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVG 312
+FNS F + S ++D + K G A F + +++IV W +MI G
Sbjct: 245 ----------LFNS--VFLKTS---LVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 313 YTRNGNGELALSMFLDM-TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR-RGLD 370
N AL +F M + I ++++ +L + L GK VH+ +++ +
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
+ FV + L+++Y KCGD+ F G +++ +SW +++ + +GR ++A+ M
Sbjct: 350 EQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWM 409
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEG 458
G +PD VT +L C+ L I +G
Sbjct: 410 QQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 313 YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY 372
+ R N E+AL++ + + I ++ A+L AC L HGK VH I GL+
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 373 LFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG--RANEAMCLFREM 430
F+ LV+MY CG ++ + F ++ SWN++L + G R + + F EM
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
GV + + + + + + + +G +++ + GL + + +VDM + G
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGLK-THALAIKNGLFNSVFLKTSLVDMYFKCGK 264
Query: 491 VAEAQSL 497
V A+ +
Sbjct: 265 VGLARRV 271
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 211/460 (45%), Gaps = 34/460 (7%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
A +FR + + +NTMI G+ E L + EM + +PD +T+ L+ ACT
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
+ + G +HG V K G + + V+NS+++ Y +
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC------------------------ 180
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDM-TRNSIQLD 337
G+ + + F++ K SW+SM+ G L +F M + +++ +
Sbjct: 181 -------GEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAE 233
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFC 397
+ L ACA+ L G +H ++R + + V SLV+MY KCG L+ + F
Sbjct: 234 ESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQ 293
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDE 457
+ +++ +++++M+ LHG A+ +F +M+ G++PD V + +L CSH GL+ E
Sbjct: 294 KMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKE 353
Query: 458 GFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLG 517
G F M E + +H C+VD+LGR G + EA L S + L
Sbjct: 354 GRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEA--LETIQSIPIEKNDVIWRTFLS 411
Query: 518 ACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKV 577
C ++ G + L L Y+++SNLY W + R E+ +G+K+
Sbjct: 412 QCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQT 471
Query: 578 PGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
PG S +E++ FVS + S P +I +L+ +E +++
Sbjct: 472 PGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLK 511
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 174/390 (44%), Gaps = 67/390 (17%)
Query: 26 HARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA 85
+A +F + D + +N MI Y ++ ++++L + M ++PD+F+Y L AC
Sbjct: 84 YAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACT 143
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G IH V G + + V NSLI+MYG+C + + VF+++ +W S
Sbjct: 144 RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSS 203
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE--SLYQ 203
++ A A GM + W+ CL LF+ MC +L
Sbjct: 204 MVSARA-----GMGM-------------WS-------------ECLLLFRGMCSETNLKA 232
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
+ SAL+ AC + + G +HGF++++ + V+ S++ Y K C A+ +
Sbjct: 233 EESGMVSALL-ACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHI 291
Query: 264 FNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELAL 323
F Q+ +N +++++MI G +G GE AL
Sbjct: 292 F-------------------------------QKMEKRNNLTYSAMISGLALHGEGESAL 320
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG-LDKYLFVGNSLVNM 382
MF M + ++ D++V +VL+AC+ ++ G+ V + +++ G ++ LV++
Sbjct: 321 RMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDL 380
Query: 383 YAKCGDLEGSALAFCGI-LEKDLVSWNSML 411
+ G LE + I +EK+ V W + L
Sbjct: 381 LGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSM-R 66
+F S I R G + + +F+++ + + +W++M++A + +G++ + L LF M
Sbjct: 167 VFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCS 226
Query: 67 ISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
+N K + +AL ACA G IH ++ + ++ V SL+DMY KC
Sbjct: 227 ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC---- 282
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
AL +F+ M +R + ++ MI+G A GE
Sbjct: 283 ---------------------------GCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG 236
E+ L +F +M + +PD + +++NAC+ S + G V ++K G
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 249/563 (44%), Gaps = 64/563 (11%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A KLFDEM DR+ N ++ + G ++ ++ M + + +Y + C+
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 87 GSHHGFGSVIHALVVVSGYR-SSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
G +H+LVV SG+ S++ VAN L+D Y C
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSAC----------------------- 262
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
L G ++ F ++PE+ I+WN++++ A G V L LF +M +P
Sbjct: 263 -------GDLSG-SMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPS 314
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWS-SAMEVKNSILSFYAKLECPSDAMEMF 264
F + +N C+ + D+ G +H +V+K G+ S++ V+++++ Y K ++ ++
Sbjct: 315 IRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLY 374
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALS 324
S N N+++ + M G T+ F D+ G E+ LS
Sbjct: 375 QSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEG-------------TGIDEVTLS 421
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
L S+ LH+C +VH C I+ G + V SL++ Y
Sbjct: 422 TVLKALSLSLP-------ESLHSCT---------LVHCCAIKSGYAADVAVSCSLIDAYT 465
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTG 444
K G E S F + ++ S++ + +G + + + REM + PDEVT
Sbjct: 466 KSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILS 525
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
+L CSH GL++EG F S+ S++G+S G ACMVD+LGR G V +A+ L +
Sbjct: 526 VLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQ--AR 583
Query: 505 SGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEI 564
A ++ LL +C H + G E L LEPE Y+ +S Y G ++ +
Sbjct: 584 GDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQ 643
Query: 565 VRKEMLDQGVKKVPGSSWIEIRN 587
+R+ + + + G S + ++N
Sbjct: 644 IREIAASRELMREIGYSSVVVKN 666
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 189/442 (42%), Gaps = 66/442 (14%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
++ +I L +SG + A + FDEM RD V +N +I+ S G +++ L+ M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ + ++ + LS C+ G +H V+ G+ ++ V ++L+ +Y CL+ D
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVD 164
Query: 128 -ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
A K+FDEM D N LL + + EV+ M + G A+ G
Sbjct: 165 VALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME----------LEGVAKNG- 213
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWS-SAMEVKN 245
T+ ++ C+ R + G +H V+KSGW+ S + V N
Sbjct: 214 --------------------LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVAN 253
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS 305
++ +Y+ S +M FN+ + +SWN+I+ G + F + +
Sbjct: 254 VLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK-----MQF 308
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII 365
W R SI+ + L+ C+ + + GK +H ++
Sbjct: 309 WGK----------------------RPSIR----PFMSFLNFCSRNSDIQSGKQIHCYVL 342
Query: 366 RRGLD-KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
+ G D L V ++L++MY KC +E SAL + + +L NS++ + G + +
Sbjct: 343 KMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDII 402
Query: 425 CLFREMVASGVKPDEVTFTGML 446
+F M+ G DEVT + +L
Sbjct: 403 EMFGLMIDEGTGIDEVTLSTVL 424
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 136/301 (45%), Gaps = 32/301 (10%)
Query: 159 ALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTE 218
A E F M R + +N +I+G++R G + L+ EM + TF ++++ C++
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSD 124
Query: 219 SRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAI 278
G VH VI G+ M V+++++ YA L +
Sbjct: 125 ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR----------------------L 162
Query: 279 IDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
+D +KL F + D+N+ ++ + + G + ++L M + +
Sbjct: 163 VDVALKL---------FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLD-KYLFVGNSLVNMYAKCGDLEGSALAFC 397
L ++ C+ ++ GK +HS +++ G + +FV N LV+ Y+ CGDL GS +F
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFN 273
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDE 457
+ EKD++SWNS++ +G +++ LF +M G +P F L CS I
Sbjct: 274 AVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQS 333
Query: 458 G 458
G
Sbjct: 334 G 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Query: 276 NAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
N ID +K G+ A AF + +++V++ +I G +R G A+ ++ +M ++
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+VL C+ G VH +I G +FV ++LV +YA C L AL
Sbjct: 110 ESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALK 168
Query: 396 -FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F +L+++L N +L F G + ++ M GV + +T+ M+ CSH L
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRL 228
Query: 455 IDEG 458
+ EG
Sbjct: 229 VYEG 232
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 170/343 (49%), Gaps = 8/343 (2%)
Query: 162 VFRSMPERVEIAWNTMI----AGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACT 217
VF + WN MI H R EA L M Q D++TF ++ AC
Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPR---EALLLFILMMISHQSQFDKFTFPFVIKACL 130
Query: 218 ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
S + G VHG IK+G+ + + +N+++ Y K P ++F+ + VSW
Sbjct: 131 ASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTT 190
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD 337
++ + A + F Q P +N+VSWT+MI Y +N + A +F M + ++ +
Sbjct: 191 MLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPN 250
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFC 397
+L A L L+ G+ VH + G F+G +L++MY+KCG L+ + F
Sbjct: 251 EFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD 310
Query: 398 GILEKDLVSWNSMLFAFGLHGRANEAMCLF-REMVASGVKPDEVTFTGMLMTCSHLGLID 456
+ K L +WNSM+ + G+HG EA+ LF + V+PD +TF G+L C++ G +
Sbjct: 311 VMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
Query: 457 EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAK 499
+G +F M +G+S +H ACM+ +L + V +A +L +
Sbjct: 371 DGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVE 413
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 34/347 (9%)
Query: 14 KIVSLARS-GRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISN-SK 71
+++S++ S G +A +F+++ + WN MI + S +++L LF M IS+ S+
Sbjct: 57 QLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQ 116
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
D F++ + AC S G+ +H L + +G+ + + N+L+D+Y KC KP RKV
Sbjct: 117 FDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKV 176
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD+M + V+W ++L+ ++S A VF MP R ++W MI + + +
Sbjct: 177 FDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAF 236
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
LF+ M +P+++T L+ A T+ + G VH + K+G+
Sbjct: 237 QLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFV------------- 283
Query: 252 AKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
L+C A+ID + K G Q A F K++ +W SMI
Sbjct: 284 --LDC----------------FLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMIT 325
Query: 312 GYTRNGNGELALSMFLDMTRN-SIQLDNLVAGAVLHACASLAILAHG 357
+G GE ALS+F +M S++ D + VL ACA+ + G
Sbjct: 326 SLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 117/285 (41%), Gaps = 36/285 (12%)
Query: 271 NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMF-LDM 329
+Q+ +I G+TQ A L F Q + +W MI + N AL +F L M
Sbjct: 51 DQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMM 110
Query: 330 TRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG-- 387
+ Q D V+ AC + + + G VH I+ G +F N+L+++Y KCG
Sbjct: 111 ISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKP 170
Query: 388 -----------------------------DLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
L+ + + F + +++VSW +M+ A+ +
Sbjct: 171 DSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNR 230
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV 478
R +EA LFR M VKP+E T +L + LG + G + + + G
Sbjct: 231 RPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG-RWVHDYAHKNGFVLDCFLG 289
Query: 479 ACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
++DM + G + +A+ K + G ++ ++ + HG
Sbjct: 290 TALIDMYSKCGSLQDAR---KVFDVMQGKSLATWNSMITSLGVHG 331
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 117/282 (41%), Gaps = 36/282 (12%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
T+ + L + ++ A +F++MP R+ V+W AMITAY ++ LF M++ + K
Sbjct: 189 TTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVK 248
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
P+ F+ L A G +H +G+ + +LIDMY KC DARKV
Sbjct: 249 PNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKV 308
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACL 191
FD M + T WN+MI G E L
Sbjct: 309 FDVMQGKSLAT-------------------------------WNSMITSLGVHGCGEEAL 337
Query: 192 GLF-KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS---- 246
LF + E+ +PD TF +++AC + ++ G +I+ S + N+
Sbjct: 338 SLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQ 397
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDT 288
+L ++E S+ +E +S FN N D + +T
Sbjct: 398 LLEQALEVEKASNLVESMDSDPDFNSSFGNEYTDGMNETNET 439
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 145/577 (25%), Positives = 254/577 (44%), Gaps = 71/577 (12%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSK 71
SK+++ + I +A +F+ + + + +N MI YS +++ S+F +R
Sbjct: 63 VSKLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLT 122
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKV 131
D FS+ L +C+ G +H + + SG+ + N+LI Y C K DARKV
Sbjct: 123 LDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKV 182
Query: 132 FDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE-IAWNTMIAGHARRGEVEAC 190
FDEM P+ V+ + ++T++ G+ + +
Sbjct: 183 FDEM-------------------------------PQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
L LF+ M +S + T + ++A ++ D+ H IK G + + +++
Sbjct: 212 LDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM 271
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMI 310
Y K S A +F+ A K++V+W MI
Sbjct: 272 YGKTGGISSARRIFDC-------------------------------AIRKDVVTWNCMI 300
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLD 370
Y + G E + + M ++ ++ +L +CA G+ V + +
Sbjct: 301 DQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIA 360
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREM 430
+G +LV+MYAK G LE + F + +KD+ SW +M+ +G HG A EA+ LF +M
Sbjct: 361 LDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKM 420
Query: 431 VASG--VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRG 488
V+P+E+TF +L CSH GL+ EG F+ M + + ++H C+VD+LGR
Sbjct: 421 EEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRA 480
Query: 489 GYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVM 548
G + EA L + TS + ++ LL AC +G+ G SV L + ++
Sbjct: 481 GQLEEAYELIRNLPITSD--STAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAIL 538
Query: 549 LSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEI 585
L+ + +G +++ L++G +K G S IEI
Sbjct: 539 LAGTHAVAGNPEKS---LDNELNKG-RKEAGYSAIEI 571
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 135/325 (41%), Gaps = 77/325 (23%)
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG-------------WSSAMEVK- 244
ESL P L+N RD + +HG+++K+G +SS ++++
Sbjct: 21 ESLLSPQ---CQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRY 77
Query: 245 ----------------NSILSFYAKLECPSDAMEMFNSFGA----FNQVSW--------- 275
N+++ Y+ + P A +FN A ++ S+
Sbjct: 78 ASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR 137
Query: 276 --------------------------NAIIDAHM---KLGDTQKAFLAFQQAPDKNIVSW 306
NA+I + K+ D +K F Q+ D V++
Sbjct: 138 ELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDA--VTF 195
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
++++ GY + LAL +F M ++ + ++ + L A + L L+ + H I+
Sbjct: 196 STLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIK 255
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCL 426
GLD L + +L+ MY K G + + F + KD+V+WN M+ + G E + L
Sbjct: 256 IGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWL 315
Query: 427 FREMVASGVKPDEVTFTGMLMTCSH 451
R+M +KP+ TF G+L +C++
Sbjct: 316 LRQMKYEKMKPNSSTFVGLLSSCAY 340
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 220/478 (46%), Gaps = 45/478 (9%)
Query: 116 IDMYGKCLKPHDARKVFDEMAD---SNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI 172
+++ KC + +++ ++ S+ S L +++ AL + R +P
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVF 72
Query: 173 AWNTMIAG---HARRGEVEACLGLFKEMCES---LYQPDQWTFSALMNACT-ESRDMLYG 225
+NT+I+ + + L+ ++ S +P+++T+ +L A +++ +G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 226 CMVHGFVIK--SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHM 283
+H V+K + V+ +++ FYA C
Sbjct: 133 RALHAHVLKFLEPVNHDRFVQAALVGFYAN--C--------------------------- 163
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
G ++A F++ + ++ +W +++ Y + + + L R ++ + L A
Sbjct: 164 --GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVA 221
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
++ +CA+L G H +++ L FVG SL+++Y+KCG L + F + ++D
Sbjct: 222 LIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRD 281
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
+ +N+M+ +HG E + L++ +++ G+ PD TF + CSH GL+DEG F
Sbjct: 282 VSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFN 341
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
SM + +G+ ++H C+VD+LGR G + EA+ KK A + LG+ HG
Sbjct: 342 SMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATL--WRSFLGSSQTHG 399
Query: 524 DLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSS 581
D G ++L LE E YV+LSN+Y +W + E R+ M D V K PG S
Sbjct: 400 DFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 133/341 (39%), Gaps = 85/341 (24%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAYSH---LGLYQQSLSLFGSMRISNSKPDSF 75
A G++ AR LF+ + + D WN ++ AY++ + ++ L LF M++ +P+
Sbjct: 161 ANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV---RPNEL 217
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
S A + +CA G H V+ + + V SLID+Y KC ARKVFDEM
Sbjct: 218 SLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEM 277
Query: 136 ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFK 195
+ +R +N MI G A G + + L+K
Sbjct: 278 S-------------------------------QRDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+ PD TF ++AC+ S G V
Sbjct: 307 SLISQGLVPDSATFVVTISACSHS----------GLV----------------------- 333
Query: 256 CPSDAMEMFNSFGAFNQVS-----WNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSM 309
+ +++FNS A + + ++D + G ++A ++ P K N W S
Sbjct: 334 --DEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSF 391
Query: 310 IVGYTRNGN---GELALSMFLDM----TRNSIQLDNLVAGA 343
+ +G+ GE+AL L + + N + L N+ AG
Sbjct: 392 LGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGV 432
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 54/283 (19%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAY--------SHLG--LYQQSLSLF 62
SK++ L+ + + +A + ++P+ +N +I++ +HL LY Q LS
Sbjct: 45 SKLLHLSSTVCLSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILS-- 102
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSH-HGFGSVIHALVV--VSGYRSSLPVANSLIDMY 119
R + +P+ F+Y + A + H G +HA V+ + V +L+ Y
Sbjct: 103 --SRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFY 160
Query: 120 GKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIA 179
C K +AR +F+ + + + T WNT++A
Sbjct: 161 ANCGKLREARSLFERIREPDLAT-------------------------------WNTLLA 189
Query: 180 GHARRGEV---EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG 236
+A E+ E L LF M +P++ + AL+ +C + + G H +V+K+
Sbjct: 190 AYANSEEIDSDEEVLLLFMRM---QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 237 WSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAII 279
+ V S++ Y+K C S A ++F+ + +NA+I
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMI 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 8/144 (5%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
F TS I ++ G + ARK+FDEM RD +NAMI + G Q+ + L+ S+
Sbjct: 252 FVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ 311
Query: 69 NSKPDSFSYSAALSACAGGSHHGFG----SVIHALVVVSGYRSSLPVANSLIDMYGKCLK 124
PDS ++ +SAC SH G + +++ V G + L+D+ G+ +
Sbjct: 312 GLVPDSATFVVTISAC---SHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGR 368
Query: 125 PHDARKVFDEM-ADSNEVTWCSLL 147
+A + +M N W S L
Sbjct: 369 LEEAEECIKKMPVKPNATLWRSFL 392
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 219/470 (46%), Gaps = 47/470 (10%)
Query: 156 FGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCE------SLYQPDQWTF 209
A+++FR +P+ + WN +I G A ++ M + ++ + D T
Sbjct: 53 LSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTC 112
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG- 268
S + AC ++ SSAM+ +L C N G
Sbjct: 113 SFTLKACA----------------RALCSSAMD----------QLHC------QINRRGL 140
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLD 328
+ + + ++DA+ K GD A+ F + P +++ SW ++I G A+ ++
Sbjct: 141 SADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKR 200
Query: 329 MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGD 388
M I+ + A L AC+ L + G+ I + + V N+ ++MY+KCG
Sbjct: 201 METEGIRRSEVTVVAALGACSHLGDVKEGEN----IFHGYSNDNVIVSNAAIDMYSKCGF 256
Query: 389 LEGSALAFCGIL-EKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLM 447
++ + F +K +V+WN+M+ F +HG A+ A+ +F ++ +G+KPD+V++ L
Sbjct: 257 VDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALT 316
Query: 448 TCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGA 507
C H GL++ G + F +M+ + G+ M H C+VD+L R G + EA + S
Sbjct: 317 ACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDP 375
Query: 508 RTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRK 567
++ LLGA + D+ +K + + +V+LSN+Y A G+WK+ VR
Sbjct: 376 VL--WQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRD 433
Query: 568 EMLDQGVKKVPGSSWIEIRNVVTAFVSGNNSSPYMADISNILYFLEIEMR 617
+M + VKK+PG S+IE + + F + + S +I + + ++R
Sbjct: 434 DMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIR 483
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 13/246 (5%)
Query: 285 LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSI------QLDN 338
GD A F+ P W ++I G+ + + LA S + M + S ++D
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
L L ACA + +H I RRGL + +L++ Y+K GDL + F
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 399 ILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
+ +D+ SWN+++ RA+EAM L++ M G++ EVT L CSHLG + EG
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGA 518
F S++ + +DM + G+V +A + ++++ T + ++
Sbjct: 230 ENIFHGYSNDNVIVSN-----AAIDMYSKCGFVDKAYQVFEQFTGKKSVVT--WNTMITG 282
Query: 519 CHAHGD 524
HG+
Sbjct: 283 FAVHGE 288
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 175/445 (39%), Gaps = 74/445 (16%)
Query: 2 HSMRSYLFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAY---SHLGL---Y 55
H S+L + +++ G + A ++F +P + WNA+I + SH L +
Sbjct: 31 HFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSW 90
Query: 56 QQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSL 115
+S+ S + + D+ + S L ACA +H + G + + +L
Sbjct: 91 YRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTL 150
Query: 116 IDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWN 175
+D Y K A K+FDE MP R +WN
Sbjct: 151 LDAYSKNGDLISAYKLFDE-------------------------------MPVRDVASWN 179
Query: 176 TMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
+IAG + L+K M + + T A + AC+ D +K
Sbjct: 180 ALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD-----------VKE 228
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAF 295
G + +F+ + N + NA ID + K G KA+ F
Sbjct: 229 GEN------------------------IFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVF 264
Query: 296 QQ-APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
+Q K++V+W +MI G+ +G AL +F + N I+ D++ A L AC ++
Sbjct: 265 EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLV 324
Query: 355 AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFA 413
+G V + + +G+++ + +V++ ++ G L + C + + D V W S+L A
Sbjct: 325 EYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Query: 414 FGLHGRANEAMCLFREMVASGVKPD 438
++ A RE+ GV D
Sbjct: 385 SEIYSDVEMAEIASREIKEMGVNND 409
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 181/377 (48%), Gaps = 52/377 (13%)
Query: 225 GCMVHGFVIKSGWSSAME-VKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHM 283
G +VHG V K G+ E + ++L FYAK
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKN----------------------------- 160
Query: 284 KLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR-----NGNGELALSMFLDMT--RNSIQL 336
GD + A F + P++ V+W +MI GY N N A+ +F + + ++
Sbjct: 161 --GDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRP 218
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL--FVGNSLVNMYAKCGDLEGSAL 394
+ VL A + +L G +VH I + G + F+G +LV+MY+KCG L +
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFS 278
Query: 395 AFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F + K++ +W SM L+GR NE L M SG+KP+E+TFT +L H+GL
Sbjct: 279 VFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGL 338
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA-QSLAKKYSKTSGARTNSYE 513
++EG F+SM + FG++ ++H C+VD+LG+ G + EA Q + K S
Sbjct: 339 VEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRS-- 396
Query: 514 VLLGACHAHGDLGTGSSVGEYLKTLEPEKEV-------GYVMLSNLYCASGQWKEAEIVR 566
L AC +G+ G +G+ L +E E E YV LSN+ G+W E E +R
Sbjct: 397 -LCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLR 455
Query: 567 KEMLDQGVKKVPGSSWI 583
KEM ++ +K PG S++
Sbjct: 456 KEMKERRIKTRPGYSFV 472
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 19 ARSGRICHARKLFDEMPDRDSVAWNAMITAY-SHLGL----YQQSLSLFGSMRISNS--K 71
A++G + +ARK+FDEMP+R SV WNAMI Y SH ++++ LF S +
Sbjct: 158 AKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVR 217
Query: 72 PDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPV--ANSLIDMYGKCLKPHDAR 129
P + LSA + GS++H + G+ + V +L+DMY KC ++A
Sbjct: 218 PTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAF 277
Query: 130 KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRG 185
VF+ M N TW S+ A + + M E EI + ++++ + G
Sbjct: 278 SVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIG 337
Query: 186 EVEACLGLFKEM 197
VE + LFK M
Sbjct: 338 LVEEGIELFKSM 349
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 130/325 (40%), Gaps = 75/325 (23%)
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAG---HARRGEVEA--CLGL 193
+E+ +LL YA + A +VF MPER + WN MI G H +G A + L
Sbjct: 146 SELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVL 205
Query: 194 FKEM--CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV--KNSILS 249
F+ C S +P T +++A +++ + G +VHG++ K G++ ++V +++
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVD 265
Query: 250 FYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSM 309
Y+K C ++ AF F+ KN+ +WTSM
Sbjct: 266 MYSKCGCLNN-------------------------------AFSVFELMKVKNVFTWTSM 294
Query: 310 IVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-KMVHSCIIRRG 368
G NG G ++ M + I+ + + ++L A + ++ G ++ S R G
Sbjct: 295 ATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFG 354
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFR 428
+ ++ Y DL G A GR EA ++
Sbjct: 355 V-------TPVIEHYGCIVDLLGKA------------------------GRIQEA---YQ 380
Query: 429 EMVASGVKPDEVTFTGMLMTCSHLG 453
++A +KPD + + CS G
Sbjct: 381 FILAMPIKPDAILLRSLCNACSIYG 405
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/553 (20%), Positives = 226/553 (40%), Gaps = 95/553 (17%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDS----VAWNAMITAYSHLGL-YQQSLSLF 62
++ TS I + A SGR A +F +M + + +N ++ + +G + + SL
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
M+ PD+++Y+ ++ C GS H + + + +G+ N+L+D+YGK
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 123 LKPHDARKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE----IAW 174
+P +A KV +EM + VT+ SL+ AYA + A+E+ M E+ +
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
T+++G R G+VE+ + +F+EM + +P+ TF+A + + +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV----SWNAIIDAHMKLGDTQK 290
G S + N++L+ + + S+ +F V ++N +I A+ + G ++
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 291 AFLAFQQAPDKNIV----SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH 346
A +++ D + ++ +++ R G E + + +M + + L ++LH
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 347 A-----------------------------------CASLAILAHGKMVHSCIIRRGLDK 371
A C+ +L + S + RG
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSP 627
Query: 372 YLFVGNSLVNMY-----------------------------------AKCGDLEGSALAF 396
+ NS+V++Y ++ D S
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 397 CGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
IL K D++S+N++++A+ + R +A +F EM SG+ PD +T+ + + +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 453 GLIDEGFAFFRSM 465
+ +E R M
Sbjct: 748 SMFEEAIGVVRYM 760
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 183/460 (39%), Gaps = 98/460 (21%)
Query: 20 RSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSF 75
+S R A K+ +EM V +N++I+AY+ G+ +++ L M +KPD F
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 76 SYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
+Y+ LS I + +G + ++ N+ I MYG K + K+FDE+
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 136 A----DSNEVTWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRG 185
+ VTW +LL + + + VF+ M PER +NT+I+ ++R G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCG 503
Query: 186 EVEACLGLFKEMCE-------SLY----------------------------QPDQWTFS 210
E + +++ M + S Y +P++ T+
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 211 ALMNA--------------------CTESRDMLYGCMV-------------HGF--VIKS 235
+L++A E R +L +V F + +
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 236 GWSSAMEVKNSILSFYAKLECPSDA---MEMFNSFG-AFNQVSWNAIIDAHMKLGDTQKA 291
G+S + NS++S Y + + + A ++ G + ++N+++ H + D K+
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 292 ------FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVL 345
LA PD I+S+ ++I Y RN A +F +M + I D + +
Sbjct: 684 EEILREILAKGIKPD--IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 346 HACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
+ A+ ++ V +I+ G NS+V+ Y K
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 31/271 (11%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
+R+ F++ P + S W+++I+ ++ L SL M N +PD +A +CA
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI 128
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSL 146
S G +H L + +GY + + V +SL+DMY KC + ARK+FDEM N VTW +
Sbjct: 129 LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGM 188
Query: 147 LFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
++ G+A+ GE E L LFKE +
Sbjct: 189 MY-------------------------------GYAQMGENEEALWLFKEALFENLAVND 217
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
++FS++++ C S + G +HG IKS + S+ V +S++S Y+K P A ++FN
Sbjct: 218 YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE 277
Query: 267 FGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
N WNA++ A+ + TQK F++
Sbjct: 278 VPVKNLGIWNAMLKAYAQHSHTQKVIELFKR 308
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 127/247 (51%), Gaps = 31/247 (12%)
Query: 212 LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFN 271
L+ + +R + G +HG+V+KSG S V N++++FY+K + P D+
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRR--------- 71
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTR 331
AF+ +P K+ +W+S+I + +N ++L M
Sbjct: 72 ----------------------AFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMA 109
Query: 332 NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEG 391
+++ D+ V + +CA L+ G+ VH ++ G D +FVG+SLV+MYAKCG++
Sbjct: 110 GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVY 169
Query: 392 SALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSH 451
+ F + ++++V+W+ M++ + G EA+ LF+E + + ++ +F+ ++ C++
Sbjct: 170 ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCAN 229
Query: 452 LGLIDEG 458
L++ G
Sbjct: 230 STLLELG 236
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+F +S + A+ G I +ARK+FDEMP R+ V W+ M+ Y+ +G +++L LF
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
N + +S+S+ +S CA + G IH L + S + SS V +SL+ +Y KC P
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMP----ERVEIAWNTMIAGHAR 183
A +VF+E+ N W ++L AYA S +E+F+ M + I + ++ +
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMN 214
G V+ F +M ES +P +++L++
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVD 361
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 27 ARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAG 86
A ++F+E+P ++ WNAM+ AY+ Q+ + LF M++S KP+ ++ L+AC+
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 87 GSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA-DSNEVTWCS 145
G + S + SL+DM G+ + +A +V M D E W +
Sbjct: 331 AGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 146 LLFA---YANSSLFGMALE-VFRSMP 167
LL + + N+ L A + VF P
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGP 416
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 106/201 (52%), Gaps = 2/201 (0%)
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
+ +CA+L L H K VH ++ + N +++M+ +C + + F +++KD
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
+ SW+ M+ A+ +G ++A+ LF EM G+KP+E TF + + C+ +G I+E F F
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
SM +E G+S +H ++ +LG+ G++ EA+ + A + +E + HG
Sbjct: 362 SMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA--DFWEAMRNYARLHG 419
Query: 524 DLGTGSSVGEYLKTLEPEKEV 544
D+ + E + ++P K V
Sbjct: 420 DIDLEDYMEELMVDVDPSKAV 440
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 54 LYQQSLSLF--GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPV 111
LY+ ++ L G+M PD + +CA +H + S +R +
Sbjct: 220 LYKDAIELLDKGAM------PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKL 273
Query: 112 ANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM 166
N +I M+G+C DA++VFD M D + +W ++ AY+++ + AL +F M
Sbjct: 274 NNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEM 328
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 128/571 (22%), Positives = 241/571 (42%), Gaps = 45/571 (7%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D V + ++ + ++ L + M P AA+S+ G G +
Sbjct: 296 DVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE----AAVSSLVEGLRKR-GKIEE 350
Query: 98 AL-----VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD----SNEVTWCSLLF 148
AL VV G +L V N+LID K K H+A +FD M N+VT+ L+
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 149 AYANSSLFGMALEVFRSMPE---RVEI-AWNTMIAGHARRGEVEACLGLFKEMCESLYQP 204
+ AL M + ++ + +N++I GH + G++ A G EM +P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
T+++LM + ++ + G + ++ ++LS + DA+++F
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 265 NSFGAF----NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV----SWTSMIVGYTRN 316
N + N+V++N +I+ + + GD KAF ++ +K IV S+ +I G
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 317 GNGELALSMFLD-MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
G A +F+D + + + +L+ + +LH L V +++RG+D L
Sbjct: 591 GQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEK--------DLVSWNSMLFAFGLHGRANEAMCLF 427
L++ K D + F G+L++ D V + SM+ A G EA ++
Sbjct: 650 YGVLIDGSLKHKDRK----LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 428 REMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGR 487
M+ G P+EVT+T ++ G ++E M + + + + C +D+L +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY-GCFLDILTK 764
Query: 488 GGY-VAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL--KTLEPEKEV 544
G + +A L K A T +Y +L+ G + S + + + P+ +
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC-I 823
Query: 545 GYVMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
Y + N C K+A + M ++G++
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 113/562 (20%), Positives = 229/562 (40%), Gaps = 42/562 (7%)
Query: 46 ITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGY 105
+ + H GL ++ LF M +PD + Y+ + + + A + +G
Sbjct: 202 LVKFRHFGL---AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGC 258
Query: 106 RSSLPVANSLIDMYGKCLKPHDARKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALE 161
++ N LID K K +A + ++A + VT+C+L++ F + LE
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 162 VFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
+ M P E A ++++ G +RG++E L L K + + P+ + ++AL+++
Sbjct: 319 MMDEMLCLRFSPS--EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM----EMFNSFGAFN 271
+ R ++ + K G + ++ + + A+ EM ++ +
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 272 QVSWNAIIDAHMKLGDTQKA--FLA--FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
+N++I+ H K GD A F+A + + +V++TS++ GY G AL ++
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
+MT I +L ++ + + + + N ++ Y + G
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 388 DLEGSALAFCGILEKDLV----SWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
D+ + + EK +V S+ ++ L G+A+EA + + +E+ +T
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL---AKK 500
G+L G ++E + + M + G+D +L G + + L K
Sbjct: 617 GLLHGFCREGKLEEALSVCQEM-----VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 501 YSKTSGARTNS--YEVLLGACHAHGDLGTGSSVGEYL--KTLEPEKEVGYVMLSNLYCAS 556
G + + Y ++ A GD + + + + P EV Y + N C +
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP-NEVTYTAVINGLCKA 730
Query: 557 GQWKEAEIVRKEMLDQGVKKVP 578
G EAE++ +M Q V VP
Sbjct: 731 GFVNEAEVLCSKM--QPVSSVP 750
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/519 (20%), Positives = 202/519 (38%), Gaps = 87/519 (16%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEMPD----RDSVAWNAMITAYSHLGLYQQSLSLFG 63
LF + I SL + + A LFD M + V ++ +I + G +LS G
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 64 SMRISNSKPDSFSYSAALSACAGGSHHGFGSV-----IHALVVVSGYRSSLPVANSLIDM 118
M + K + Y++ ++ H FG + A ++ ++ SL+
Sbjct: 427 EMVDTGLKLSVYPYNSLING-----HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 119 YGKCLKPHDARKVFDEMADSNEV----TWCSLLFAYANSSLFGMALEVFRSM------PE 168
Y K + A +++ EM T+ +LL + L A+++F M P
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 169 RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACT----------- 217
RV +N MI G+ G++ KEM E PD +++ L++
Sbjct: 542 RV--TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 218 ---------ESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM------- 261
E ++ Y ++HGF + A+ V ++ L+ +
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 262 ------------EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAF----LAFQQAPDKNIVS 305
EM + + V + ++IDA K GD ++AF L + N V+
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 306 WTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM------ 359
+T++I G + G A ++ + +Q + V V + C L IL G++
Sbjct: 720 YTAVINGLCKAGFVNEA-----EVLCSKMQPVSSVPNQVTYGCF-LDILTKGEVDMQKAV 773
Query: 360 -VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL----EKDLVSWNSMLFAF 414
+H+ I++ GL N L+ + + G +E ++ ++ D +++ +M+
Sbjct: 774 ELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 415 GLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLG 453
+A+ L+ M G++PD V + ++ C G
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 163/421 (38%), Gaps = 98/421 (23%)
Query: 8 LFQTTSKIVSLARSGRICHARKLFDEM------PDRDSVAWNAMITAYSHLGLYQQSLSL 61
++ T+ + L R+G I A KLF+EM P+R V +N MI Y G ++
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR--VTYNVMIEGYCEEGDMSKAFEF 564
Query: 62 FGSMRISNSKPDSFSYSAALSACAGGSHHGF---GSVIHALVVVSGYRSSLPVANSLIDM 118
M PD++SY + HG G A V V G
Sbjct: 565 LKEMTEKGIVPDTYSYRPLI--------HGLCLTGQASEAKVFVDGLHK----------- 605
Query: 119 YGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER-VE---IAW 174
G C + NE+ + LL + AL V + M +R V+ + +
Sbjct: 606 -GNC--------------ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD------------- 221
+I G + + + GL KEM + +PD ++++++A +++ D
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 222 -------MLYGCMVHGFVIKSGWSSAMEVKNS----------------ILSFYAKLECP- 257
+ Y +++G K+G+ + EV S L K E
Sbjct: 711 EGCVPNEVTYTAVINGLC-KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 258 SDAMEMFNSF--GAF-NQVSWNAIIDAHMKLGDTQKA------FLAFQQAPDKNIVSWTS 308
A+E+ N+ G N ++N +I + G ++A + +PD +++T+
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD--CITYTT 827
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
MI R + + A+ ++ MT I+ D + ++H C + + + ++R+G
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 369 L 369
L
Sbjct: 888 L 888
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/523 (21%), Positives = 217/523 (41%), Gaps = 34/523 (6%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDRDSV----AWNAMITAYSHLGLYQQSLSLFGSMRI 67
TS I L ++ R+ A ++F+ + V A+N MI Y G + ++ SL R
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRS----SLPVANSLIDMYGKCL 123
S P +Y+ L+ G V AL V + +L N LIDM +
Sbjct: 337 KGSIPSVIAYNCILTCL-----RKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAG 391
Query: 124 KPHDARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWN 175
K A ++ D M + N T ++ S A +F M +V EI +
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFC 451
Query: 176 TMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
++I G + G V+ ++++M +S + + +++L+ G ++ +I
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV----SWNAIIDAHMKLGDTQKA 291
S +++ N+ + K P MF A V S++ +I +K G +
Sbjct: 512 NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANET 571
Query: 292 FLAFQQAPDKNIV----SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHA 347
+ F ++ V ++ +I G+ + G A + +M + + G+V+
Sbjct: 572 YELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDG 631
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----D 403
A + L M+ + ++ + + +SL++ + K G ++ + L +++K +
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
L +WNS+L A NEA+ F+ M P++VT+ ++ + ++ F F++
Sbjct: 692 LYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQ 751
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSG 506
M + G+ M+ L + G +AEA +L ++ G
Sbjct: 752 EMQKQ-GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 115/593 (19%), Positives = 237/593 (39%), Gaps = 69/593 (11%)
Query: 12 TSKIVSLARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
T+ I A+ GR+ A L DEM D D V +N I ++ +G + F +
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ KPD +Y+ S+I + K + +
Sbjct: 267 NGLKPDEVTYT-----------------------------------SMIGVLCKANRLDE 291
Query: 128 ARKVFDEMADSNEV----TWCSLLFAYANSSLFGMALEVFR------SMPERVEIAWNTM 177
A ++F+ + + V + +++ Y ++ F A + S+P IA+N +
Sbjct: 292 AVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV--IAYNCI 349
Query: 178 IAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW 237
+ + G+V+ L +F+EM + P+ T++ L++ + + + + K+G
Sbjct: 350 LTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFG----AFNQVSWNAIIDAHMKLGDTQKAFL 293
+ N ++ K + +A MF +++++ ++ID K+G A+
Sbjct: 409 FPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYK 468
Query: 294 AFQQAPD----KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACA 349
+++ D N + +TS+I + +G E ++ DM + D + +
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF 528
Query: 350 SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLV 405
G+ + I R + L++ K G + F + E+ D
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 406 SWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSM 465
++N ++ F G+ N+A L EM G +P VT+ ++ + + +DE + F
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 466 SSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSY--EVLLGACHAHG 523
S+ + + + ++D G+ G + EA + ++ + G N Y LL A
Sbjct: 649 KSK-RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ-KGLTPNLYTWNSLLDALVKAE 706
Query: 524 DLGTGSSVGEYLKTLE-PEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVK 575
++ + +K L+ +V Y +L N C ++ +A + +EM QG+K
Sbjct: 707 EINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMK 759
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAF-----CGILEKDLVSWNSMLFAFGLHGRANE 422
G + + + +L+ +AK G ++ SAL+ L+ D+V +N + +FG G+ +
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVD-SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 423 AMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC-- 480
A F E+ A+G+KPDEVT+T M+ +DE F + V C
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN-------RRVPCTY 309
Query: 481 ----MVDMLGRGGYVAEAQS-LAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL 535
M+ G G EA S L ++ +K S +Y +L G + V E +
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 536 KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGV 574
K Y +L ++ C +G+ A +R M G+
Sbjct: 370 KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 207/478 (43%), Gaps = 24/478 (5%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
TS I++ + G + A +L DEM + VA ++IT + +L LF M
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
P+S ++S + + + V G S+ +++I + K K +
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427
Query: 128 ARKVFDEMADSN--EVTWCSLLFAY-ANSSLFGMALEVFRSMPER----VEIAWNTMIAG 180
A K+FDE ++ V C+ + ++ A E+ M R +++N ++ G
Sbjct: 428 ALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
H R+ ++ +F + E +P+ +T+S L++ C + D V + S
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN 547
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV-----SWNAIIDAHMKLGDTQKAFLAF 295
V +I++ K+ S A E+ + ++ S+N+IID K G+ A A+
Sbjct: 548 GVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY 607
Query: 296 QQ----APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASL 351
++ N++++TS++ G +N + AL M +M ++LD GA++
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKR 667
Query: 352 AILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLVSW 407
+ + + S ++ GL+ + NSL++ + G++ + + +L+ DL ++
Sbjct: 668 SNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 408 NSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSM 465
+++ G A L+ EM A G+ PDE+ +T ++ S G + F M
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEM 785
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 121/603 (20%), Positives = 254/603 (42%), Gaps = 47/603 (7%)
Query: 7 YLFQTTSKIVSLARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLF 62
Y+ +T S +L + + A++L+ M D D+V ++ A ++L +
Sbjct: 200 YVNRTLS---ALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVL 256
Query: 63 GSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC 122
++PDS YS A+ AC + + L + + +P + +
Sbjct: 257 SRAIERGAEPDSLLYSLAVQACCKTLDLAMANSL--LREMKEKKLCVPSQETYTSVILAS 314
Query: 123 LKP---HDARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSM----PERVE 171
+K DA ++ DEM N V SL+ + ++ AL +F M P
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNS 374
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGF 231
+ ++ +I + GE+E L +K+M P + ++ + + +
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
Query: 232 VIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGD 287
++G ++ V N+ILS+ K +A E+ + + N VS+N ++ H + +
Sbjct: 435 SFETGLANVF-VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 288 TQKAFLAFQQAPDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
A + F +K N +++ +I G RN + + AL + MT ++I+++ +V
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVG----NSLVNMYAKCGDLEGSALAF--- 396
+++ + + + + + +I +K L V NS+++ + K G+++ + A+
Sbjct: 554 IINGLCKVGQTSKARELLANMIE---EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 397 CGI-LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
CG + +++++ S++ + R ++A+ + EM GVK D + ++ +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN--SYE 513
+ A F + E GL+ ++ G + A L KK K G R + +Y
Sbjct: 671 ESASALFSELLEE-GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK-DGLRCDLGTYT 728
Query: 514 VLLGACHAHGDLGTGSSVGEYLKT--LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLD 571
L+ G+L S + ++ L P+ E+ Y ++ N GQ+ + + +EM
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPD-EIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 572 QGV 574
V
Sbjct: 788 NNV 790
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/453 (19%), Positives = 181/453 (39%), Gaps = 83/453 (18%)
Query: 26 HARKLFDEMPDR---DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALS 82
A KLFDE + + N +++ G ++ L M P+ SY+ +
Sbjct: 427 EALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVML 486
Query: 83 ACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD---ARKVFDEMADSN 139
+ ++ + ++ G + + + LID C + HD A +V + M SN
Sbjct: 487 GHCRQKNMDLARIVFSNILEKGLKPNNYTYSILID---GCFRNHDEQNALEVVNHMTSSN 543
Query: 140 ----EVTWCSLLFAYANSSLFGMALEVFRSMPERVEI-----AWNTMIAGHARRGEVEAC 190
V + +++ A E+ +M E + ++N++I G + GE+++
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
+ ++EMC + P+ T+++LMN ++ M A+E+++ + +
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRM---------------DQALEMRDEMKNK 648
Query: 251 YAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ------APDKNIV 304
KL+ P+ + A+ID K + + A F + P + I
Sbjct: 649 GVKLDIPA----------------YGALIDGFCKRSNMESASALFSELLEEGLNPSQPI- 691
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD---------------NLVAGAVLHACA 349
+ S+I G+ GN AL ++ M ++ ++ D NL+ + L+
Sbjct: 692 -YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 350 SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNS 409
L +++++ I+ K FV +V M+ + + +++ +N+
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFV--KVVKMFEEMKK---------NNVTPNVLIYNA 799
Query: 410 MLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
++ G +EA L EM+ G+ PD TF
Sbjct: 800 VIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/604 (18%), Positives = 239/604 (39%), Gaps = 67/604 (11%)
Query: 22 GRIC---HARKLFDEMPDRD----SVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
G+ C + + L+DEM + + + +I YS GL +L G M +PD
Sbjct: 198 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 257
Query: 75 FSYSAALSACAGGSHHGFGSVI-----------HALVVVSGYRSSLPVANSLIDMYGKCL 123
+ L + V +S Y N++ID YGK
Sbjct: 258 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSY-----TYNTMIDTYGKSG 312
Query: 124 KPHDARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSM-----PERVEIAW 174
+ +A + F M + VT+ +++ Y N+ G + ++M P+ +
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTR--TY 370
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
N +I+ H + ++E FKEM + +PD ++ R +LY + V +
Sbjct: 371 NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY----------RTLLYAFSIRHMVEE 420
Query: 235 S-GWSSAMEVKN---------SILSFYAKLECPSDAMEMFNSF---GAFNQVSWNAIIDA 281
+ G + M+ N ++ Y + E + F F G + ++A IDA
Sbjct: 421 AEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDA 480
Query: 282 HMKLG---DTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
+ + G + ++ F+ Q+ + ++ + MI Y + + E A +F M + D
Sbjct: 481 YGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDK 540
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
++ AS + G+ + G ++++ + K G L + +
Sbjct: 541 CTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKE 600
Query: 399 I----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
+ +E D+V + ++ AF G +AM M +G+ + V + ++ + +G
Sbjct: 601 MVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGY 660
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVA--CMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSY 512
+DE A +R + + D CM+++ V +A+++ + A ++
Sbjct: 661 LDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTF 720
Query: 513 EVLLGACHAHGDLGTGSSVGEYLKTLEP-EKEVGYVMLSNLYCASGQWKEAEIVRKEMLD 571
++L +G + + + ++ ++ + Y + L+ G++KEA KEM+
Sbjct: 721 AMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVS 780
Query: 572 QGVK 575
G++
Sbjct: 781 SGIQ 784
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 189/449 (42%), Gaps = 44/449 (9%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D+ +N +I+ ++ +++ + F M+ KPD SY L A S+ H
Sbjct: 366 DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF---------SIRH 416
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCL------------KPHDARKVFDEMADSNEVTWCS 145
+ G + + N ID Y + K K F + + + +
Sbjct: 417 MVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSA 476
Query: 146 LLFAYANSSLFGMALEVF---RSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLY 202
+ AY A VF + + +R I +N MI + E LF+ M
Sbjct: 477 NIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 203 QPDQWTFSALMNACTESRDMLYG--CMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDA 260
PD+ T++ L+ S DM + C + ++G+ S +++S + KL + A
Sbjct: 537 TPDKCTYNTLVQILA-SADMPHKGRCYLEKMR-ETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 261 MEMFNSFGAFN----QVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVG 312
E++ +N V + +I+A G+ Q+A + + I V + S+I
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKL 654
Query: 313 YTRNGNGELALSMFLDMTR--NSIQL-DNLVAGAVLHACASLAILAHGKMVHSCIIRRGL 369
YT+ G + A +++ + + N Q D + +++ + +++ + + + +RG
Sbjct: 655 YTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG- 713
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGILE----KDLVSWNSMLFAFGLHGRANEAMC 425
+ F ++ MY K G E + + E D +S+NS+L F L GR EA+
Sbjct: 714 EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVE 773
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGL 454
F+EMV+SG++PD+ TF + LG+
Sbjct: 774 TFKEMVSSGIQPDDSTFKSLGTILMKLGM 802
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 195/458 (42%), Gaps = 34/458 (7%)
Query: 12 TSKIVSLARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
TS IV+ + G + A ++ DEM +A +++ Y ++L LF M
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373
Query: 68 SNSKPDSFSYSAALS-ACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
PD +S + C + V SS+ V M CLK
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT----MIQGCLKAE 429
Query: 127 DARKVFDEMADSNEVTW------CSLLFA-YANSSLFGMALEVFRSMPER-VE---IAWN 175
+ DS E +W C+ +F + A + M ++ +E + +N
Sbjct: 430 SPEAALEIFNDSFE-SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 176 TMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
M+ H R ++ +F EM E +P+ +T+S L++ +++D V + S
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNAS 548
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQ-----VSWNAIIDAHMKLGDTQK 290
+ + + N+I++ K+ S A EM + + S+N+IID +K+GDT
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS 608
Query: 291 AFLAFQQAPDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH 346
A +++ + N+V++TS+I G+ ++ +LAL M +M ++LD GA++
Sbjct: 609 AVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALID 668
Query: 347 ACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK---- 402
+ + S + GL + V NSL++ + G ++ + + ++
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC 728
Query: 403 DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
DL ++ +M+ G N A L+ E++ G+ PDE+
Sbjct: 729 DLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI 766
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 102/501 (20%), Positives = 201/501 (40%), Gaps = 72/501 (14%)
Query: 17 SLARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP 72
SL RS I A++++++M D+V ++ A ++++ +F + ++P
Sbjct: 213 SLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEP 272
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA------NSLIDMYGKCLKPH 126
D +S A+ A ++ AL ++ R L V S+I + K
Sbjct: 273 DGLLFSLAVQAACKTP-----DLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327
Query: 127 DARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGE 186
+A +V DEM FG+ + V IA +++ G+ + E
Sbjct: 328 EAVRVMDEMVG------------------FGIPMSV---------IAATSLVNGYCKGNE 360
Query: 187 VEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
+ L LF M E PD+ FS ++ ++ +M + + + + + ++
Sbjct: 361 LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT 420
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSW-------NAIIDAHMKLG--DTQKAFLAF-- 295
++ K E P A+E+FN +F SW N I K G D +FL
Sbjct: 421 MIQGCLKAESPEAALEIFND--SFE--SWIAHGFMCNKIFLLFCKQGKVDAATSFLKMME 476
Query: 296 QQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILA 355
Q+ + N+V + +M++ + R N +LA S+F +M ++ +N ++
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 356 HGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL-----VSWNSM 410
+ V + + + + N+++N K G + ++++ S+NS+
Sbjct: 537 NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSI 596
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFG 470
+ F G + A+ +REM +G P+ VTFT ++ GF M
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI----------NGFCKSNRMDLALE 646
Query: 471 LSHGMDHVACMVDMLGRGGYV 491
++H M + +D+ G +
Sbjct: 647 MTHEMKSMELKLDLPAYGALI 667
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/422 (19%), Positives = 168/422 (39%), Gaps = 85/422 (20%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHAL 99
V +N M+ A+ + + S+F M +P++F+YS
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI-------------------- 524
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA----DSNEVTWCSLLFAYANSSL 155
LID + K +A V ++M ++NEV + +++
Sbjct: 525 ---------------LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 156 FGMALEVFRSMPERVE-----IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFS 210
A E+ +++ + ++N++I G + G+ ++ + ++EM E+ P+ TF+
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 211 ALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF 270
+L+N GF + A+E+ + + S KL+ P+
Sbjct: 630 SLIN---------------GFCKSNRMDLALEMTHEMKSMELKLDLPA------------ 662
Query: 271 NQVSWNAIIDAHMKLGDTQKAFLAFQQAPD----KNIVSWTSMIVGYTRNGNGELALSMF 326
+ A+ID K D + A+ F + P+ N+ + S+I G+ G + A+ ++
Sbjct: 663 ----YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLY 718
Query: 327 LDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKC 386
M + I D ++ + ++S ++ G+ + LVN +K
Sbjct: 719 KKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKK 778
Query: 387 GDLEGSALAFCGILEKDLVSWNSMLFAF---GLH--GRANEAMCLFREMVASGVKPDEVT 441
G ++ + +KD V+ N +L++ G H G NEA L EM+ G+ D+
Sbjct: 779 GQFLKASKMLEEMKKKD-VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Query: 442 FT 443
F
Sbjct: 838 FN 839
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 113/565 (20%), Positives = 225/565 (39%), Gaps = 62/565 (10%)
Query: 35 PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGS 94
P + V + +I + G ++ LF M +PD +YS + G G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 95 VIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM----ADSNEVTWCSLLFAY 150
+ + + G + + V +S ID+Y K A V+ M N VT+ L+
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 151 ANS----SLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQ 206
FGM ++ + E + ++++I G + G + + L+++M + Y PD
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461
Query: 207 WTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNS 266
+ L++ ++ ML+ ++ + V NS++ + +L +A+++F
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521
Query: 267 FGAF----NQVSWNAIIDAHMKLGDTQKA----FLAFQQAPDKNIVSWTSMIVGYTRNGN 318
G + + ++ ++ + G ++A F F+ + + +++ ++I + ++
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 319 GELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNS 378
+ L +F M RN I D V V+H ++ C K+ N+
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIH------------LLFKCHRIEDASKFF---NN 626
Query: 379 LVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
L+ G +E D+V++N+M+ + R +EA +F + + P+
Sbjct: 627 LIE----------------GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSM----SSEFGLSHG--MDHVACMVDMLGRGGYVA 492
VT T ++ +D F M S +++G MD + VD+ G
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFE 730
Query: 493 EAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL--KTLEPEKEVGYVMLS 550
E Q K SY +++ G + +++ L P+ V Y +L
Sbjct: 731 EMQ------EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD-VVAYAILI 783
Query: 551 NLYCASGQWKEAEIVRKEMLDQGVK 575
YC G+ EA ++ + ML GVK
Sbjct: 784 RGYCKVGRLVEAALLYEHMLRNGVK 808
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 159/373 (42%), Gaps = 36/373 (9%)
Query: 18 LARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
L++ G + HA + +M + + V +N++I + L + ++L +F M I KPD
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
+++ + + + G +LID + K +KP ++FD
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 134 EMAD---SNEVTWCS----LLFA---YANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
M S ++ C+ LLF ++S F L + P+ V +NTMI G+
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV--TYNTMICGYCS 648
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
++ +F+ + + + P+ T + L++ ++ DM + + + G
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 244 KNSILSFYAKLECPSDAMEMFNSFGAFNQ----------VSWNAIIDAHMKLGDTQKAFL 293
++ +++K ++++ SF F + VS++ IID K G +A
Sbjct: 709 YGCLMDWFSK------SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 294 AFQQAPD----KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACA 349
F QA D ++V++ +I GY + G A ++ M RN ++ D+L+ A+
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNP 822
Query: 350 SLAILAHGKMVHS 362
+++ G VH
Sbjct: 823 PKWLMSKGVWVHD 835
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/454 (20%), Positives = 193/454 (42%), Gaps = 26/454 (5%)
Query: 12 TSKIVSLARSGRICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
+S I +SG + A ++ M + V + +I G ++ ++G +
Sbjct: 360 SSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKC-LKPH 126
+P +YS+ + + G ++ ++ GY + + L+D K L H
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 127 DAR---KVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPE---RVEIA-WNTMIA 179
R K+ + N V + SL+ + + F AL+VFR M + ++A + T++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSS 239
G +E L LF M + +PD + L++A + G + + ++ S+
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 240 AMEVKNSILSFYAKLECPSDAMEMFNSF--GAFNQ--VSWNAIIDAH---MKLGDTQKAF 292
+ V N ++ K DA + FN+ G V++N +I + +L + ++ F
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 293 LAFQQAP-DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH-ACAS 350
+ P N V+ T +I +N + + A+ MF M + + + G ++ S
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE----KDLVS 406
+ I K+ + +G+ + + +++ K G ++ + F ++ D+V+
Sbjct: 720 VDIEGSFKLFEE-MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
+ ++ + GR EA L+ M+ +GVKPD++
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
L P N+V++ ++I G+ + G + A +F M + I+ D + ++
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 353 ILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF----CGILEKDLVSWN 408
+L G + S + +G+ + V +S +++Y K GDL +++ + C + ++V++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 409 SMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
++ GR EA ++ +++ G++P VT++ ++ G + GFA + M +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IK 454
Query: 469 FGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
G + +VD L + G + A + K
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/553 (20%), Positives = 239/553 (43%), Gaps = 102/553 (18%)
Query: 15 IVSLARSGRICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
I +L R G++ A+++F+ A++A+I+AY GL+++++S+F SM+
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHAL--VVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+P+ +Y+A + AC G F V + +G + NSL+ + + A
Sbjct: 300 RPNLVTYNAVIDACGKGGME-FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 129 RKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMP-ERV---EIAWNTMIAG 180
R +FDEM + + ++ +LL A +A E+ MP +R+ ++++T+I G
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 181 HARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
A+ G + L LF EM D+ ++
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSY------------------------------- 447
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQKAFLAFQ 296
N++LS Y K+ +A+++ + + V++NA++ + K G + F
Sbjct: 448 ----NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 297 QAPDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
+ + N+++++++I GY++ G + A+ +F + ++ D ++ A++ A
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 353 ILAHGKMVHSCIIRRGLDKYLFVGNSLVNM------------YAKCGDLEGSALAFCGIL 400
++ + + + G+ + NS+++ Y+ G L S+ A +
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 401 EKDLVSWNSMLFAFG-LHGRAN------------EAMCL---FREMVASGVKPDEVTFTG 444
E + N ++ FG L +N E C+ FR+M +KP+ VTF+
Sbjct: 624 ETE---GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSA 680
Query: 445 MLMTCSHLGLIDEGFAFFRSM----SSEFGLSHGMDHVACMVDMLGRGGYV-AEAQSLAK 499
+L CS ++ + + +G+ HG+ ++G+ V +AQSL
Sbjct: 681 ILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGL--------LMGQRENVWLQAQSLFD 732
Query: 500 KYSKTSGARTNSY 512
K ++ G+ +++
Sbjct: 733 KVNEMDGSTASAF 745
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 154/315 (48%), Gaps = 25/315 (7%)
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDA----HMKLGD 287
G+ + + ++++S Y + +A+ +FNS + N V++NA+IDA M+
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 288 TQKAFLAFQQ---APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
K F Q+ PD+ +++ S++ +R G E A ++F +MT I+ D +
Sbjct: 323 VAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 345 LHA-CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK- 402
L A C + +++ ++R + + +++++ +AK G + AL G +
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSY-STVIDGFAKAGRFD-EALNLFGEMRYL 438
Query: 403 ----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
D VS+N++L + GR+ EA+ + REM + G+K D VT+ +L G DE
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 459 FAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS--YEVLL 516
F M E L + + + + ++D +GG EA + +++ K++G R + Y L+
Sbjct: 499 KKVFTEMKREHVLPNLLTY-STLIDGYSKGGLYKEAMEIFREF-KSAGLRADVVLYSALI 556
Query: 517 GACHAHGDLGTGSSV 531
A +G +G+ S+
Sbjct: 557 DALCKNGLVGSAVSL 571
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 120/291 (41%), Gaps = 22/291 (7%)
Query: 340 VAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI 399
+A A++ + K + G ++ ++L++ Y + G E + F +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 400 ----LEKDLVSWNSMLFAFGLHG-RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
L +LV++N+++ A G G + F EM +GV+PD +TF +L CS GL
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 455 IDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA-QSLAKKYSKTSGARTNSYE 513
+ F M++ + + ++D + +GG + A + LA+ K SY
Sbjct: 355 WEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 514 VLLGACHAHGDLGTGSSV-GEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQ 572
++ G ++ GE V Y L ++Y G+ +EA + +EM
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 573 GVKKVPGSSWIEIRNVVT--AFVSGNNSSPYMADISNILYFLEIEMRHTRP 621
G+KK +VVT A + G ++ + F E++ H P
Sbjct: 474 GIKK----------DVVTYNALLGGYGKQGKYDEVKKV--FTEMKREHVLP 512
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 205/473 (43%), Gaps = 52/473 (10%)
Query: 141 VTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNTMIAGHARRGEVEACLGLFKE 196
VT+ +L+ AY++ L A E+ +MP + +NT+I G + G+ E +F E
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 197 MCESLYQPDQWTF-SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
M S PD T+ S LM AC + G +V + S S V + L
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKK------GDVVETEKVFSDMRSRDVVPD--------LV 376
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTR 315
C S M +F G ++ A M ++A L PD V +T +I GY R
Sbjct: 377 CFSSMMSLFTRSGNLDK--------ALMYFNSVKEAGLI----PDN--VIYTILIQGYCR 422
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
G +A+++ +M + +D + +LH +L + + + R L +
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYT 482
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMV 431
L++ + K G+L+ + F + EK D+V++N++L FG G + A ++ +MV
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 432 ASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYV 491
+ + P ++++ ++ G + E F + M S+ + + M+ R G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPTVMICNSMIKGYCRSGNA 601
Query: 492 AEAQS-LAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEK------EV 544
++ +S L K S+ SY L+ ++ + +K +E E+
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGL---VKKMEEEQGGLVPDVF 658
Query: 545 GYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIRNVVTAFVSGNN 597
Y + + +C Q KEAE+V ++M+++GV P S ++ FVS +N
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVN--PDRSTYTC--MINGFVSQDN 707
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 184/469 (39%), Gaps = 98/469 (20%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D V +N +I+AYS GL +++ L +M P ++Y+ ++ + +
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVT----WCSLLFAYANS 153
A ++ SG SL+ K + KVF +M + V + S++ + S
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 154 SLFGMALEVFRSMPE----RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTF 209
AL F S+ E + + +I G+ R+G + + L EM +
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ--------- 439
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV--KNSILSFYAKLECPSDAMEMFNSF 267
GC AM+V N+IL K + +A ++FN
Sbjct: 440 ---------------GC-------------AMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 268 GAF----NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGYTRNGNG 319
+ + +ID H KLG+ Q A FQ+ +K ++V++ +++ G+ + G+
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSL 379
+ A ++ DM I + +++A S LA V +I + + + + NS+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 380 VNMYAKCGDL--------------------------------EGSALAFCGILEK----- 402
+ Y + G+ E + AF G+++K
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF-GLVKKMEEEQ 650
Query: 403 -----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
D+ ++NS+L F + EA + R+M+ GV PD T+T M+
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 167/390 (42%), Gaps = 35/390 (8%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRDSVA----WNAMITAYSHLGLYQQSLSLFGSMRIS 68
S ++ + G + K+F +M RD V +++M++ ++ G ++L F S++ +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHAL---VVVSGYRSSLPVANSLIDMYGKCLKP 125
PD+ Y+ + G G SV L ++ G + N++ ++G C +
Sbjct: 405 GLIPDNVIYTILIQ---GYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI--LHGLCKRK 459
Query: 126 H--DARKVFDEMAD----SNEVTWCSLLFAYANSSLFGMALEVFRSMPE-RVE---IAWN 175
+A K+F+EM + + T L+ + A+E+F+ M E R+ + +N
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 176 TMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
T++ G + G+++ ++ +M P ++S L+NA + V +I
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 236 GWSSAMEVKNSILSFYAKLECPSDA---MEMFNSFGAFNQ-VSWNAIIDAHMKLGDTQKA 291
+ + NS++ Y + SD +E S G +S+N +I ++ + KA
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA 639
Query: 292 FLAFQQAPDK------NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVL 345
F ++ ++ ++ ++ S++ G+ R + A + M + D ++
Sbjct: 640 FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699
Query: 346 HACASLAILAHGKMVHSCIIRRGL---DKY 372
+ S L +H +++RG DK+
Sbjct: 700 NGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 132/365 (36%), Gaps = 58/365 (15%)
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGYTRNG 317
E+ S N + N +++A K G +K Q +K +IV++ ++I Y+ G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
E A + M V++ K V + ++R GL
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 378 SLVNMYAKCGDLEGSALAFCGILEKD----LVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
SL+ K GD+ + F + +D LV ++SM+ F G ++A+ F + +
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHG--MD--------HVACMVD 483
G+ PD V +T ++ G+I M L G MD H C
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEM-----LQQGCAMDVVTYNTILHGLCKRK 459
Query: 484 MLGRG-----------------------------GYVAEAQSLAKKYSKTSGARTN--SY 512
MLG G + A L +K K R + +Y
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTY 518
Query: 513 EVLLGACHAHGDLGTGSSVGEYL--KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEML 570
LL GD+ T + + K + P + Y +L N C+ G EA V EM+
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILP-TPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 571 DQGVK 575
+ +K
Sbjct: 578 SKNIK 582
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/568 (20%), Positives = 234/568 (41%), Gaps = 79/568 (13%)
Query: 39 SVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHH-GFGSVIH 97
S ++ ++ +YS L L ++LS+ + P SY+A L A + F +
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS----NEVTWCSLLFAYANS 153
++ S ++ N LI + A +FD+M N VT+ +L+ Y
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 154 SLFGMALEVFRSMP----ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTF 209
++ RSM E I++N +I G R G ++ + EM Y D+ T+
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL-------------SFYAKLE- 255
+ L+ + + ++H +++ G + ++ S++ F ++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 256 ---CPSDA-----MEMFNSFGAFNQ-----------------VSWNAIIDAHMKLGDTQK 290
CP++ ++ F+ G N+ V++NA+I+ H G +
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 291 AFLAFQQAPDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH 346
A + +K ++VS+++++ G+ R+ + + AL + +M I+ D + +++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493
Query: 347 ACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK---- 402
++ ++R GL F +L+N Y GDLE + ++EK
Sbjct: 494 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 553
Query: 403 DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL---------- 452
D+V+++ ++ R EA L ++ P +VT+ ++ CS++
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 453 -----GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG--RGGYVAEAQSLAKKYSKTS 505
G++ E F SM G +H D A + + G R G + +A +L K+ K S
Sbjct: 614 GFCMKGMMTEADQVFESM---LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK-S 669
Query: 506 GARTNSYEV--LLGACHAHGDLGTGSSV 531
G ++ V L+ A H G + +SV
Sbjct: 670 GFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 107/504 (21%), Positives = 199/504 (39%), Gaps = 64/504 (12%)
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCS------LLFA 149
+H L Y+++ +A D+ K L A VF + ++ ++ + + ++ +
Sbjct: 87 LHILTKFKLYKTAQILAE---DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKS 143
Query: 150 YANSSLFGMALEVFRS------MPERVEIAWNTMIAGHAR-RGEVEACLGLFKEMCESLY 202
Y+ SL AL + MP +++N ++ R + + +FKEM ES
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGV--LSYNAVLDATIRSKRNISFAENVFKEMLESQV 201
Query: 203 QPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAME 262
P+ +T Y ++ GF A L+ + K+E
Sbjct: 202 SPNVFT---------------YNILIRGFCFAGNIDVA-------LTLFDKMETK----- 234
Query: 263 MFNSFGAF-NQVSWNAIIDAHMKLGDTQKAFLAFQ----QAPDKNIVSWTSMIVGYTRNG 317
G N V++N +ID + KL F + + + N++S+ +I G R G
Sbjct: 235 -----GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 318 NGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGN 377
+ + +M R LD + ++ ++H+ ++R GL +
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYT 349
Query: 378 SLVNMYAKCGDLEGSALAFCGILE-----KDLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
SL++ K G++ A+ F + + ++ +++ F G NEA + REM
Sbjct: 350 SLIHSMCKAGNM-NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVA 492
+G P VT+ ++ G +++ A M E GLS + + ++ R V
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK-EKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 493 EAQSLAKK-YSKTSGARTNSYEVLL-GACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLS 550
EA + ++ K T +Y L+ G C E L+ P E Y L
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 551 NLYCASGQWKEAEIVRKEMLDQGV 574
N YC G ++A + EM+++GV
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGV 551
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 142/317 (44%), Gaps = 18/317 (5%)
Query: 273 VSWNAIIDAHMK-------LGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
+S+NA++DA ++ + K L Q +P N+ ++ +I G+ GN ++AL++
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSP--NVFTYNILIRGFCFAGNIDVALTL 227
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
F M + + ++ L + G + + +GL+ L N ++N +
Sbjct: 228 FDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR 287
Query: 386 CGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
G ++ + + + D V++N+++ + G ++A+ + EM+ G+ P +T
Sbjct: 288 EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
+T ++ + G ++ F M GL +VD + GY+ EA + ++
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 502 SKTS-GARTNSYEVLLGACHAHGDLGTGSSVGEYLKT--LEPEKEVGYVMLSNLYCASGQ 558
+ +Y L+ G + +V E +K L P+ V Y + + +C S
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV-VSYSTVLSGFCRSYD 465
Query: 559 WKEAEIVRKEMLDQGVK 575
EA V++EM+++G+K
Sbjct: 466 VDEALRVKREMVEKGIK 482
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 125/316 (39%), Gaps = 28/316 (8%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
T+ + ++ G + A ++ EM D V +NA+I + G + ++++ M+
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
PD SYS LS + +V G + +SLI + + + +
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 128 ARKVFDEM----ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIA 179
A +++EM +E T+ +L+ AY AL++ M E+ + ++ +I
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSS 239
G ++ L ++ P T+ L+ C+ ++ GF +K +
Sbjct: 564 GLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTE 623
Query: 240 AMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
A +V S+L K P + ++N +I H + GD +KA+ +++
Sbjct: 624 ADQVFESML---GKNHKP-------------DGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 300 DKNIVSWTSMIVGYTR 315
+ T ++ +
Sbjct: 668 KSGFLLHTVTVIALVK 683
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 214/486 (44%), Gaps = 50/486 (10%)
Query: 9 FQTTSKIVSLARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGS 64
F ++ + + AR G + A++ F E+ + +V +NA++ + G+Y ++LS+
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 65 MRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVA---NSLIDMYGK 121
M ++ DS +Y+ ++A GF ++ + + +P A ++ID YGK
Sbjct: 342 MEENSCPADSVTYNELVAAYV---RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGK 398
Query: 122 CLKPHDARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSM------PERVE 171
K +A K+F M ++ N T+ ++L S +++ M P R
Sbjct: 399 AGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRA- 457
Query: 172 IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGF 231
WNTM+A +G + +F+EM ++PD+ TF+ L++A + ++G
Sbjct: 458 -TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGE 516
Query: 232 VIKSGWSSAMEVKNSILSFYAKL---ECPSDAMEMFNSFG-AFNQVSWNAIIDAHMKLGD 287
+ ++G+++ + N++L+ A+ + + S G + S++ ++ + K G+
Sbjct: 517 MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN 576
Query: 288 TQKAFLAFQQAPDK-----NIVSWTSMIVGYTRN------GNGELALSMFLDMTRNSIQL 336
+L ++ ++ SW + N E A ++F ++ +
Sbjct: 577 ----YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF---KKHGYKP 629
Query: 337 DNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF 396
D ++ ++L + + + I GL L NSL++MY + G+ A
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC-WKAEEI 688
Query: 397 CGILEK-----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSH 451
LEK DLVS+N+++ F G EA+ + EM G++P T+ + +
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 452 LGLIDE 457
+G+ E
Sbjct: 749 MGMFAE 754
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 117/535 (21%), Positives = 219/535 (40%), Gaps = 81/535 (15%)
Query: 4 MRSYLFQT---TSKIVSLARSGRICHARKLFDEM----PDRDSVAWNAMITAYSHLGL-Y 55
++ YL T+ + + +R+G+ A LF+ M P V +N ++ + +G +
Sbjct: 203 LQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSW 262
Query: 56 QQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSL 115
++ L + MR K D F+ S LSACA A + GY N+L
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 116 IDMYGKCLKPHDARKVFDEMAD----SNEVTWCSLLFAYANSSLFGMALEVFRSMPER-- 169
+ ++GK +A V EM + ++ VT+ L+ AY + A V M ++
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 170 --VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM-------------- 213
I + T+I + + G+ + L LF M E+ P+ T++A++
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 214 -------NACTESR----DMLYGCMVHG---FV------IKS-GWSSAMEVKNSILSFYA 252
N C+ +R ML C G FV +KS G+ + N+++S Y
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 253 KLECPSDAMEMFNSF--GAFNQ--VSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----V 304
+ DA +M+ FN ++NA+++A + GD + K
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA-----ILAHGKM 359
S++ M+ Y + GN + ++ N I+ + +L LA LA +
Sbjct: 563 SYSLMLQCYAKGGN-----YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE--------KDLVSWNSML 411
+ + G + + NS+++++ + + + GILE DLV++NS++
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE----GILESIREDGLSPDLVTYNSLM 673
Query: 412 FAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS 466
+ G +A + + + S +KPD V++ ++ GL+ E M+
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMT 728
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 115/525 (21%), Positives = 216/525 (41%), Gaps = 52/525 (9%)
Query: 18 LARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
L R + A KL D++P + D A+ ++ AYS G Y++++ LF M+ P
Sbjct: 185 LGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPT 244
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMY------GKCLKP-- 125
+Y+ L FG + + + G + D + C +
Sbjct: 245 LVTYNVILDV--------FGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 126 -HDARKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNT 176
+A++ F E+ + VT+ +LL + + ++ AL V + M E + +N
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 177 MIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSG 236
++A + R G + G+ + M + P+ T++ +++A ++ + + ++G
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 237 WSSAMEVKNSILSFYAKLECPSDAMEMF---NSFG-AFNQVSWNAIIDAHMKLGDTQKAF 292
N++LS K ++ ++M S G + N+ +WN ++ G +
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN 476
Query: 293 LAFQQ------APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH 346
F++ PD++ ++ ++I Y R G+ A M+ +MTR A+L+
Sbjct: 477 RVFREMKSCGFEPDRD--TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 347 ACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLV- 405
A A G+ V S + +G + ++ YAK G+ G I E +
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
Query: 406 SW---NSMLFA-FGLHGRA--NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGF 459
SW ++L A F A A LF++ G KPD V F ML + + D+
Sbjct: 595 SWMLLRTLLLANFKCRALAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAE 651
Query: 460 AFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKT 504
S+ E GLS + ++DM R G +A+ + K K+
Sbjct: 652 GILESI-REDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/398 (19%), Positives = 161/398 (40%), Gaps = 24/398 (6%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPD----RDSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
T+ I + ++G+ A KLF M + ++ +NA+++ + + + M+
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKS 449
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+ P+ +++ L+ C F + + + G+ N+LI YG+C D
Sbjct: 450 NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVD 509
Query: 128 ARKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIA 179
A K++ EM ++ T+ +LL A A + V M + E +++ M+
Sbjct: 510 ASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ 569
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSS 239
+A+ G + + E P L+ A + R + K G+
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKP 629
Query: 240 AMEVKNSILSFYAKLECPSDAMEMFNSFG----AFNQVSWNAIIDAHMKLGDTQKA---- 291
M + NS+LS + + A + S + + V++N+++D +++ G+ KA
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 292 --FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACA 349
Q PD +VS+ ++I G+ R G + A+ M +MT I+ +
Sbjct: 690 KTLEKSQLKPD--LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 350 SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
++ + A + V C+ + +V+ Y + G
Sbjct: 748 AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 4/199 (2%)
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
+ C L K+VH I + NS++ MY+ CG +E + F + E++
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
L +W ++ F +G+ +A+ F G KPD F + C LG ++EG F
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFE 306
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
SM E+G+ M+H +V ML GY+ EA ++ ++ + +E L+ HG
Sbjct: 307 SMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL----RFVESMEPNVDLWETLMNLSRVHG 362
Query: 524 DLGTGSSVGEYLKTLEPEK 542
DL G + ++ L+ +
Sbjct: 363 DLILGDRCQDMVEQLDASR 381
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 2/154 (1%)
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
S G + ++N+II+ + G + A F P++N+ +W +I + +NG GE A+
Sbjct: 210 SVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDT 269
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR-GLDKYLFVGNSLVNMYA 384
F + + D + + AC L + G + + + G+ + SLV M A
Sbjct: 270 FSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLA 329
Query: 385 KCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG 418
+ G L+ AL F +E ++ W +++ +HG
Sbjct: 330 EPGYLD-EALRFVESMEPNVDLWETLMNLSRVHG 362
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 211/482 (43%), Gaps = 51/482 (10%)
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLG 192
N T+ L+ + S +AL V M P+ V + N+++ G + +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL--NSLLNGFCHGNRISDAVS 172
Query: 193 LFKEMCESLYQPDQWTFSALM------NACTES-----RDMLYGC----MVHGFVIKSGW 237
L +M E YQPD +TF+ L+ N +E+ R ++ GC + +G V+ +G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV-NGL 231
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
++ + LS K+E +E V +N IIDA + A F +
Sbjct: 232 CKRGDI-DLALSLLKKME--QGKIEP-------GVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 298 APDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
+K N+V++ S+I G A + DM I + + A++ A
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD----LVSWNS 409
L + ++ +I+R +D +F +SL+N + L+ + F ++ KD +V++N+
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 410 MLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEF 469
++ F R +E M LFREM G+ + VT+T ++ D F+ M S+
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 470 GLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN--SYEVLL-GACHAHGDLG 526
L M + + ++D L G V E + +Y + S + +Y +++ G C A G +
Sbjct: 462 VLPDIMTY-SILLDGLCNNGKV-ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA-GKVE 518
Query: 527 TGSSV--GEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIE 584
G + LK ++P V Y + + +C G +EA+ + +EM ++G G+
Sbjct: 519 DGWDLFCSLSLKGVKPNV-VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 585 IR 586
IR
Sbjct: 578 IR 579
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 183/437 (41%), Gaps = 36/437 (8%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D V N+++ + H ++SL G M +PDSF+++ + G H S
Sbjct: 150 DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIH---GLFRHNRASEAV 206
Query: 98 ALV---VVSGYRSSLP----VANSL-----IDMYGKCLKPHDARKVFDEMADSNEVTWCS 145
ALV VV G + L V N L ID+ LK + K+ + V + +
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI-----EPGVVIYNT 261
Query: 146 LLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
++ A N AL +F M + + +N++I G L +M E
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
P+ TFSAL++A + ++ ++ +IK + +S+++ + + +A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 262 EMFN---SFGAF-NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGY 313
MF S F N V++N +I K + F++ + N V++T++I G+
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
+ + A +F M + + D + +L + + +V + R ++ +
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAMCLFRE 429
+ N ++ K G +E FC + ++ ++V++ +M+ F G EA LFRE
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 430 MVASGVKPDEVTFTGML 446
M G PD T+ ++
Sbjct: 562 MKEEGPLPDSGTYNTLI 578
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/459 (18%), Positives = 189/459 (41%), Gaps = 55/459 (11%)
Query: 154 SLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM 213
+LFG ++ +S P + ++ +++ A+ + + + L ++M + +T+S L+
Sbjct: 67 NLFG---DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 214 NACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM---------- 263
N + V ++K G+ + NS+L+ + SDA+ +
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 264 -----FNSF--GAFNQ----------------------VSWNAIIDAHMKLGDTQKAFLA 294
FN+ G F V++ +++ K GD A
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 295 FQQAP----DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACAS 350
++ + +V + ++I N AL++F +M I+ + + +++ +
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLVS 406
+ + S +I R ++ + ++L++ + K G L + + ++++ D+ +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS 466
++S++ F +H R +EA +F M++ P+ VT+ ++ +DEG FR MS
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 467 SEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK-YSKTSGARTNSYEVLLGACHAHGDL 525
GL ++ + AQ + K+ S +Y +LL +G +
Sbjct: 424 QR-GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKV 482
Query: 526 GTGSSVGEYLK--TLEPEKEVGYVMLSNLYCASGQWKEA 562
T V EYL+ +EP+ +M+ + C +G+ ++
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGM-CKAGKVEDG 520
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 203/464 (43%), Gaps = 27/464 (5%)
Query: 123 LKPHDARKVFDEMADSNE----VTWCSLLFAYANSSLFGMALEVFRSMPE----RVEIAW 174
LK DA +F EM S + + LL A A + F + + + M +
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 175 NTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIK 234
+ +I RR ++ L + +M + Y+P+ T S+L+N S+ + + +
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 235 SGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQK 290
+G+ N+++ S+AM + + A + V++ +++ K GDT
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 291 AFLAF----QQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH 346
AF Q + ++ + ++I G + + + AL++F +M I+ + + +++
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 347 ACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL-- 404
+ + + S +I R ++ +F ++L++ + K G L + + ++++ +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 405 --VSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFF 462
V+++S++ F +H R +EA +F MV+ PD VT+ ++ ++EG F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 463 RSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN--SYEVLLGACH 520
R MS GL ++ L + G AQ + K+ + G N +Y LL
Sbjct: 420 REMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV-SDGVPPNIMTYNTLLDGLC 477
Query: 521 AHGDLGTGSSVGEYLK--TLEPEKEVGYVMLSNLYCASGQWKEA 562
+G L V EYL+ +EP +M+ + C +G+ ++
Sbjct: 478 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM-CKAGKVEDG 520
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 120/584 (20%), Positives = 235/584 (40%), Gaps = 83/584 (14%)
Query: 17 SLARSG----RICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
L+R+G ++ A LF EM P + ++ +++A + + + +SL M+
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+ ++YS ++ S + ++ GY ++ +SL++ Y + +A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 129 RKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVE 188
+ D+M + Y ++ + +NT+I G +
Sbjct: 171 VALVDQM----------FVTGYQPNT-----------------VTFNTLIHGLFLHNKAS 203
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
+ L M QPD T YG +V+G + A + N +
Sbjct: 204 EAMALIDRMVAKGCQPDLVT---------------YGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 249 SFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIV 304
KLE P + +N IID K A F++ K N+V
Sbjct: 249 Q--GKLE-PG-------------VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
+++S+I G A + DM I D A++ A L + ++ +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRA 420
++R +D + +SL+N + L+ + F ++ K D+V++N+++ F + R
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
E M +FREM G+ + VT+ ++ G D F+ M S+ G+ +
Sbjct: 413 EEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNT 471
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGART-NSYEVLL-GACHAHGDLGTGSSV--GEYLK 536
++D L + G + +A + + ++ T +Y +++ G C A G + G + LK
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA-GKVEDGWDLFCNLSLK 530
Query: 537 TLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGS 580
++P+ V Y + + +C G +EA+ + KEM + G +P S
Sbjct: 531 GVKPDV-VAYNTMISGFCRKGSKEEADALFKEMKEDGT--LPNS 571
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 211/500 (42%), Gaps = 71/500 (14%)
Query: 105 YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE----VTWCSLLFAYANSSLFGMAL 160
YR L N L+D LK DA +F EM S V + LL A A + F + +
Sbjct: 47 YREKLS-RNVLLD-----LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVI 100
Query: 161 EVFRSMPERVE--------IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
S+ ER++ ++N +I RR ++ L + +M + Y+PD T S+L
Sbjct: 101 ----SLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSL 156
Query: 213 MNA-CTESR-------------------DMLYGCMVHGFVIKSGWSSAMEVKNSILSFYA 252
+N C R + + ++HG + + S A+ + + +++
Sbjct: 157 LNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA--- 213
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTS 308
C D ++ +++ K GD A ++ + ++V +T+
Sbjct: 214 -RGCQPDLF------------TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 309 MIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
+I N AL++F +M I+ + + +++ + + + S +I R
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAM 424
++ + ++L++ + K G L + + ++++ D+ +++S++ F +H R +EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
+F M++ P+ VT+ ++ ++EG FR MS GL ++
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQG 439
Query: 485 LGRGGYVAEAQSLAKK-YSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLK--TLEPE 541
L + G AQ + KK S +Y +LL +G L V EYL+ +EP+
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 542 KEVGYVMLSNLYCASGQWKE 561
+M+ + C +G+ ++
Sbjct: 500 IYTYNIMIEGM-CKAGKVED 518
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 123/580 (21%), Positives = 229/580 (39%), Gaps = 77/580 (13%)
Query: 23 RICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ A LF EM P V +N +++A + + + +SL M+ D +SY+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
++ S + ++ GY + +SL++ Y + +A + D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF-- 177
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
V P V +NT+I G + + L M
Sbjct: 178 -----------------------VMEYQPNTV--TFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
QPD +T YG +V+G + A+ S+L K + +
Sbjct: 213 ARGCQPDLFT---------------YGTVVNGLCKRGDIDLAL----SLLKKMEKGKIEA 253
Query: 259 DAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGYT 314
D V + IIDA + A F + +K N+V++ S+I
Sbjct: 254 DV------------VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 315 RNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLF 374
G A + DM I + + A++ A L + ++ +I+R +D +F
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEKD----LVSWNSMLFAFGLHGRANEAMCLFREM 430
+SL+N + L+ + F ++ KD +V++N+++ F R E M LFREM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 431 VASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGY 490
G+ + VT+ ++ G D F+ M S+ G+ + + ++D L + G
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGK 480
Query: 491 VAEAQSLAKKYSKTS-GARTNSYEVLL-GACHAHGDLGTGSSV--GEYLKTLEPEKEVGY 546
+ +A + + K+ +Y +++ G C A G + G + LK ++P +
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA-GKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 547 VMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIR 586
M+S +C G +EA+ + +EM + G G+ IR
Sbjct: 540 TMISG-FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 97/491 (19%), Positives = 188/491 (38%), Gaps = 82/491 (16%)
Query: 23 RICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
RI A L D+M ++V +N +I ++++L M +PD F+Y
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 79 AALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
++ C G S++ + + + + ++ID +DA +F EM +
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN 283
Query: 138 S----NEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNTMIAGHARRGEVEA 189
N VT+ SL+ N + A + M ER + ++ +I + G++
Sbjct: 284 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
L+ EM + PD +T+S+L+N GF +
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLIN---------------GFCM---------------- 372
Query: 250 FYAKLECPSDAMEMFNSFGAF-NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIV 304
+ +L+ E+ S F N V++N +I K ++ F++ + N V
Sbjct: 373 -HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
++ ++I G + G+ ++A +F M + + D + +L + +GK+ + +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG-----LCKYGKLEKALV 486
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRANEAM 424
+ L K +E D+ ++N M+ G+ +
Sbjct: 487 VFEYLQK--------------------------SKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDM 484
LF + GVKP+ + +T M+ GL +E A FR M + L + + +
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRAR 580
Query: 485 LGRGGYVAEAQ 495
L G A A+
Sbjct: 581 LRDGDKAASAE 591
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/567 (19%), Positives = 233/567 (41%), Gaps = 73/567 (12%)
Query: 13 SKIVSLARSGRICHARKLFDEMPD----RDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
+ + SLA++GR A+++F + D DSV +N M+ YS +G +++ L M +
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
+PD ++ ++ + + + ++ N+L+ GK K +A
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 129 RKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMI 178
++F+ M N +T+ +L + +AL++ M P+ +NT+I
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV--FTYNTII 650
Query: 179 AGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTES----------RDMLYGC-- 226
G + G+V+ + F +M + +Y PD T L+ ++ + LY C
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCAD 709
Query: 227 ---------MVHGFVIKSGWSSAMEVK------------NSILSFYAKLECP----SDAM 261
++ + ++G +A+ +SIL + C S A
Sbjct: 710 QPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGAR 769
Query: 262 EMFNSFGAFNQV-----SWNAIIDAHMK---LGDTQKAFLAFQQA---PDKNIVSWTSMI 310
+F F V ++N +I ++ + Q FL + PD + ++ ++
Sbjct: 770 TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD--VATYNFLL 827
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG-KMVHSCIIRRGL 369
Y ++G + ++ +M+ + + + + V+ + + + + R
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 370 DKYLFVGNSLVNMYAKCGDLEGSALAFCGILE----KDLVSWNSMLFAFGLHGRANEAMC 425
L++ +K G L + F G+L+ + +N ++ FG G A+ A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 426 LFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDML 485
LF+ MV GV+PD T++ ++ +G +DEG +F+ + E GL+ + +++ L
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL-KESGLNPDVVCYNLIINGL 1006
Query: 486 GRGGYVAEAQSLAKKYSKTSGARTNSY 512
G+ + EA L + + G + Y
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLY 1033
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/509 (17%), Positives = 196/509 (38%), Gaps = 27/509 (5%)
Query: 13 SKIVSLARSGRICHARKLFDEMPDRD----SVAWNAMITAYSHLGLYQQSLSLFGSMRIS 68
S I +L ++ R+ A K+F M + V +N ++ G Q+++ LF M
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 69 NSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA 128
P++ +++ + ++ G + N++I K + +A
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Query: 129 RKVFDEMAD---SNEVTWCSLLFAYANSSLFGMALEV-----FRSMPERVEIAWNTMIAG 180
F +M + VT C+LL +SL A ++ + + + W +I
Sbjct: 663 MCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 181 HARRGEVEACLGLFKEMCES--LYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWS 238
++ + + + + D + +C + + F G
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ 782
Query: 239 SAMEVKNSILSFYAK---LECPSDAMEMFNSFGAFNQV-SWNAIIDAHMKLGDTQKAFLA 294
+ N ++ + +E D S G V ++N ++DA+ K G + F
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 295 FQQAP----DKNIVSWTSMIVGYTRNGNGELALSMFLD-MTRNSIQLDNLVAGAVLHACA 349
+++ + N ++ +I G + GN + AL ++ D M+ G ++ +
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 350 SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLV 405
L K + ++ G + N L+N + K G+ + + F ++++ DL
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 406 SWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSM 465
+++ ++ + GR +E + F+E+ SG+ PD V + ++ ++E F M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 466 SSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
+ G++ + ++ LG G V EA
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/501 (18%), Positives = 193/501 (38%), Gaps = 52/501 (10%)
Query: 17 SLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKP 72
+L G++ +FD M R D+ + + + S G +Q+ MR
Sbjct: 127 ALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVL 186
Query: 73 DSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVF 132
+++SY+ + ++ +++ G+R SL +SL+ GK +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 133 DEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARR 184
EM N T+ + + A E+ + M + + + +I
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 185 GEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVK 244
+++ +F++M ++PD+ T+ L++ +++RD+
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL---------------------- 344
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
+S+ F++++E ++ V++ ++DA K G+ +AF D+ I+
Sbjct: 345 DSVKQFWSEMEKDGHVPDV---------VTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 305 ----SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
++ ++I G R + AL +F +M ++ +
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGL 416
+ +G+ + N+ + AK G + F G+ L D V++N M+ +
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
G +EA+ L EM+ +G +PD + ++ T +DE + F M E L +
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM-KEMKLKPTVV 574
Query: 477 HVACMVDMLGRGGYVAEAQSL 497
++ LG+ G + EA L
Sbjct: 575 TYNTLLAGLGKNGKIQEAIEL 595
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/554 (18%), Positives = 205/554 (37%), Gaps = 85/554 (15%)
Query: 4 MRSYLFQTTSKIVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSL 59
++ ++ T I L R+G+I A ++ M D D V + +I A +
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 60 SLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMY 119
+F M+ KPD +Y +L+D +
Sbjct: 314 EVFEKMKTGRHKPDRVTYI-----------------------------------TLLDRF 338
Query: 120 GKCLKPHDARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI--- 172
++ + EM + VT+ L+ A + FG A + M ++ +
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 173 -AWNTMIAGHARRGEVEACLGLFKEMCESL-YQPDQWTFSALMNACTESRDMLYGCMVHG 230
+NT+I G R ++ L LF M ESL +P +T+ ++ +S D +
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNM-ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 231 FVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLG 286
+ G + + N+ L AK +A ++F + V++N ++ + K+G
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 287 DTQKAFLAF----QQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAG 342
+ +A + + +++ S+I + + A MF+ M ++ +
Sbjct: 518 EIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYN 577
Query: 343 AVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE- 401
+L + + ++++G N+L + K ++ + +++
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 402 ---KDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEG 458
D+ ++N+++F +G+ EAMC F +M V PD VT +L LI++
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDA 696
Query: 459 FA----------------FFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL----- 497
+ F+ + G+D+ + L G + S+
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 498 --AKKYSKTSGART 509
+ K++ SGART
Sbjct: 757 RYSCKHNNVSGART 770
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 130/319 (40%), Gaps = 34/319 (10%)
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM-----LYGCM 227
+N +I G +E +F ++ + PD T++ L++A +S + LY M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 228 ----------VHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNA 277
H VI SG A V ++ L Y L D ++G
Sbjct: 847 STHECEANTITHNIVI-SGLVKAGNVDDA-LDLYYDLMSDRDFSPTACTYGP-------- 896
Query: 278 IIDAHMKLGDTQKAFLAFQQAPD----KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNS 333
+ID K G +A F+ D N + +I G+ + G + A ++F M +
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 334 IQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSA 393
++ D ++ + + G + GL+ + N ++N K LE +
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 394 LAFCGI-----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMT 448
+ F + + DL ++NS++ G+ G EA ++ E+ +G++P+ TF ++
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 449 CSHLGLIDEGFAFFRSMSS 467
S G + +A +++M +
Sbjct: 1077 YSLSGKPEHAYAVYQTMVT 1095
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 19/216 (8%)
Query: 15 IVSLARSGRICHARKLFDEMPD---RDSVA-WNAMITAYSHLGLYQQSLSLFGSMRISNS 70
I L++SGR+ A++LF+ M D R + A +N +I + G + +LF M
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
+PD +YS + G + SG + N +I+ GK + +A
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMAL------------EVFRSMPERVEIAWNTMI 178
+F+EM S +T L+ Y NS + + + E+ R+ E +N +I
Sbjct: 1018 LFNEMKTSRGIT--PDLYTY-NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
Query: 179 AGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMN 214
G++ G+ E +++ M + P+ T+ L N
Sbjct: 1075 RGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 148/317 (46%), Gaps = 13/317 (4%)
Query: 270 FNQVSWNAIIDAHMKLGDTQKA----FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
+N S+N +I +LG ++A L + +++S+++++ GY R G + +
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
M R ++ ++ + G+++ + LA + S +IR+G+ V +L++ + K
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 386 CGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
GD+ ++ F + + D++++ +++ F G EA LF EM G++PD VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
FT ++ G + + F M + G S + ++D L + G + A L +
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 502 SKTSGARTNSY---EVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
K G + N + ++ G C + VGE+ V Y L + YC SG+
Sbjct: 483 WKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 559 WKEAEIVRKEMLDQGVK 575
+A+ + KEML +G++
Sbjct: 542 MDKAQEILKEMLGKGLQ 558
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 189/479 (39%), Gaps = 59/479 (12%)
Query: 16 VSLARSGRICH----ARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
V L R + C+ A +F E P+ + ++N +I LG +++ L M +
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 68 SNSKPDSFSYSAALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
PD SYS ++ C G +I + G + + + S+I + + K
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM-KRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 127 DARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMI 178
+A + F EM + V + +L+ + A + F M R + + +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 179 AGHARRGEVEACLGLFKEM-CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW 237
+G + G++ LF EM C+ L +PD TF+ L+N ++ M VH +I++G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
S N V++ +ID K GD A +
Sbjct: 453 SP-------------------------------NVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 298 ----APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
NI ++ S++ G ++GN E A+ + + + D + ++ A
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL----VSWNS 409
+ + + ++ +GL + N L+N + G LE +L K + ++NS
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 410 MLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
++ + + A ++++M + GV PD T+ ++ + E + F+ M +
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 190/473 (40%), Gaps = 61/473 (12%)
Query: 126 HDARKVFDEMADSN---EVTWCSLLFAYANSSLF--GMALEVFRSMPERVEIAWNT---- 176
+AR+VF++M + V C++ + + A+ VFR PE V + WN
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE-VGVCWNVASYN 250
Query: 177 -MIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
+I + G ++ L M Y PD ++S ++N ++ + + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSF---GAF-NQVSWNAIIDAHMKLGDTQKA 291
G + SI+ ++ ++A E F+ G + V + +ID K GD + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 292 FLAFQQAPDKNI----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHA 347
F + ++I +++T++I G+ + G+ A +F +M ++ D++ +++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKD 403
+ VH+ +I+ G + +L++ K GDL+ + + L+ +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
+ ++NS++ G EA+ L E A+G+ D VT+T ++ G +D+ +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
+MLG+G ++ VL+ HG
Sbjct: 551 -------------------EMLGKG----------------LQPTIVTFNVLMNGFCLHG 575
Query: 524 DLGTGSSVGEYL--KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGV 574
L G + ++ K + P + L YC K A + K+M +GV
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATT-FNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 148/317 (46%), Gaps = 13/317 (4%)
Query: 270 FNQVSWNAIIDAHMKLGDTQKA----FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSM 325
+N S+N +I +LG ++A L + +++S+++++ GY R G + +
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 326 FLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
M R ++ ++ + G+++ + LA + S +IR+G+ V +L++ + K
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 386 CGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVT 441
GD+ ++ F + + D++++ +++ F G EA LF EM G++PD VT
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 442 FTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY 501
FT ++ G + + F M + G S + ++D L + G + A L +
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 502 SKTSGARTNSY---EVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQ 558
K G + N + ++ G C + VGE+ V Y L + YC SG+
Sbjct: 483 WKI-GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 559 WKEAEIVRKEMLDQGVK 575
+A+ + KEML +G++
Sbjct: 542 MDKAQEILKEMLGKGLQ 558
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/479 (20%), Positives = 189/479 (39%), Gaps = 59/479 (12%)
Query: 16 VSLARSGRICH----ARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
V L R + C+ A +F E P+ + ++N +I LG +++ L M +
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 68 SNSKPDSFSYSAALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPH 126
PD SYS ++ C G +I + G + + + S+I + + K
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM-KRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 127 DARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMI 178
+A + F EM + V + +L+ + A + F M R + + +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 179 AGHARRGEVEACLGLFKEM-CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGW 237
+G + G++ LF EM C+ L +PD TF+ L+N ++ M VH +I++G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 238 SSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
S N V++ +ID K GD A +
Sbjct: 453 SP-------------------------------NVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 298 ----APDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
NI ++ S++ G ++GN E A+ + + + D + ++ A
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL----VSWNS 409
+ + + ++ +GL + N L+N + G LE +L K + ++NS
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 410 MLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
++ + + A ++++M + GV PD T+ ++ + E + F+ M +
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 95/473 (20%), Positives = 190/473 (40%), Gaps = 61/473 (12%)
Query: 126 HDARKVFDEMADSN---EVTWCSLLFAYANSSLF--GMALEVFRSMPERVEIAWNT---- 176
+AR+VF++M + V C++ + + A+ VFR PE V + WN
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE-VGVCWNVASYN 250
Query: 177 -MIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS 235
+I + G ++ L M Y PD ++S ++N ++ + + +
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 236 GWSSAMEVKNSILSFYAKLECPSDAMEMFNSF---GAF-NQVSWNAIIDAHMKLGDTQKA 291
G + SI+ ++ ++A E F+ G + V + +ID K GD + A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 292 FLAFQQAPDKNI----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHA 347
F + ++I +++T++I G+ + G+ A +F +M ++ D++ +++
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKD 403
+ VH+ +I+ G + +L++ K GDL+ + + L+ +
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
+ ++NS++ G EA+ L E A+G+ D VT+T ++ G +D+ +
Sbjct: 491 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Query: 464 SMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHG 523
+MLG+G ++ VL+ HG
Sbjct: 551 -------------------EMLGKG----------------LQPTIVTFNVLMNGFCLHG 575
Query: 524 DLGTGSSVGEYL--KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGV 574
L G + ++ K + P + L YC K A + K+M +GV
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATT-FNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 182/448 (40%), Gaps = 57/448 (12%)
Query: 130 KVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPER-VEI---AWNTMIAGH 181
+VFD M +E + L A + LE+FR M + V+I + ++ G
Sbjct: 175 RVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGL 234
Query: 182 ARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAM 241
RRGEVE L KE +P+ +T++ ++NA + RD V + K G
Sbjct: 235 CRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNK 294
Query: 242 EVKNSILSFYAKLECPSDAMEMFNSF---GAFNQVS-WNAIIDAHMKLGDTQKAFLAFQQ 297
++ K SDA ++F+ G + V + ++I + + G+ ++AFL F +
Sbjct: 295 VTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDE 354
Query: 298 APDKNI----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
+K + ++ ++I G + G A + +M + + +V ++ +
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 354 LAHGKMVHSCIIRRGLDKYLFVGNS----------------------------------- 378
+ M++ + ++G +F N+
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 379 LVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASG 434
L+++Y K G++E + F + ++ + +++N M++A+ G+ EA L M A+G
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANG 534
Query: 435 VKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA 494
+ PD T+T ++ +DE F M + GL M+ L + G EA
Sbjct: 535 MDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 495 QSLAKKYSKTSGARTNS-YEVLLGACHA 521
L + + N Y L+G+ H+
Sbjct: 594 FGLYDEMKRKGYTIDNKVYTALIGSMHS 621
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 88/456 (19%), Positives = 186/456 (40%), Gaps = 59/456 (12%)
Query: 15 IVSLARSGRICHARKLFDEMPDRDSVAWNAMITAYS---------HLGLYQQSLSLFGSM 65
+V+ + RI ++F M D IT YS G ++S L
Sbjct: 196 LVAAKKRRRIDLCLEIFRRMVDS-----GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEF 250
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVS--GYRSSLPVANSLIDMYGKCL 123
+ KP++++Y+ ++A F V L V+ G + L+++ K
Sbjct: 251 SVKGIKPEAYTYNTIINAYV--KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNG 308
Query: 124 KPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHAR 183
K DA K+FDEM + R + V + + ++I+ + R
Sbjct: 309 KMSDAEKLFDEMRE--------------------------RGIESDVHV-YTSLISWNCR 341
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
+G ++ LF E+ E P +T+ AL++ + +M ++ + G + V
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 244 KNSILSFYAKLECPSDAMEMFN-----SFGAFNQVSWNAIIDAHMKLGDTQKA----FLA 294
N+++ Y + +A +++ F A + + N I +L +A F
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQA-DVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 295 FQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAIL 354
+ + VS+T++I Y + GN E A +F++M+ +Q + + +++A +
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 355 AHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSM 410
+ + + + G+D + SL++ +++ + F + L+++ V++ M
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGML 446
+ G+++EA L+ EM G D +T ++
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 124/571 (21%), Positives = 222/571 (38%), Gaps = 66/571 (11%)
Query: 29 KLFD----EMPDR---DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL 81
KLFD E D + A ++ + + ++ + + G++R N K + S L
Sbjct: 82 KLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVL 141
Query: 82 SACA-GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS-- 138
A A GS + +V + + NSL+ + K + DARKV+DEM D
Sbjct: 142 HAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGD 201
Query: 139 --NEVTWCSLLFAYANSSLFGMALEVFRSMPE--------RVEIAWNTMIAGHARRGEVE 188
+ + C L+ N +EV R + E + +NT+I G+ + G++E
Sbjct: 202 SVDNYSTCILVKGMCNEG----KVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIE 257
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
+FKE+ + P TF ++N + D + + V + G ++ N+I+
Sbjct: 258 NAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII 317
Query: 249 SFYAKLECPSDAMEMFNSFGA----FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV 304
+ D E A + ++N +I+ K G + A +A K ++
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 305 ----SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
S+ +I Y ++ ++A + L M + D I+ +G ++
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD---------------IVTYGILI 422
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGRA 420
H ++ +D VNM K D S D +N ++ GR
Sbjct: 423 HGLVVSGHMD-------DAVNMKVKLIDRGVSP---------DAAIYNMLMSGLCKTGRF 466
Query: 421 NEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVAC 480
A LF EM+ + PD + ++ G DE F S+S E G+ + H
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEKGVKVDVVHHNA 525
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTN-SYEVLLGACHAHGDLGTGSSVGEYLKTLE 539
M+ R G + EA + + ++ +Y ++ D+ T + Y++ +
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 540 PEKEV-GYVMLSNLYCASGQWKEAEIVRKEM 569
+ V Y L N +C G +K AE KEM
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 94/498 (18%), Positives = 187/498 (37%), Gaps = 114/498 (22%)
Query: 18 LARSGRICHARKLFDEMPDR-DSVA----------------------------------- 41
L +S R+ ARK++DEM DR DSV
Sbjct: 180 LVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPN 239
Query: 42 ---WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSA-CAGGSHHGFGSVIH 97
+N +I Y LG + + +F +++ P ++ ++ C G ++
Sbjct: 240 IVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLS 299
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFG 157
V G R S+ N++ID A+ D E S+ + AN
Sbjct: 300 E-VKERGLRVSVWFLNNIID----------AKYRHGYKVDPAE----SIGWIIANDCKPD 344
Query: 158 MALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACT 217
+A +N +I + G+ E +G E + P+ +++ L+ A
Sbjct: 345 VA-------------TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 218 ESRD--------------------MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECP 257
+S++ + YG ++HG V+ A+ +K ++ + P
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID---RGVSP 448
Query: 258 SDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVS----WTSMIVGY 313
A+ +N ++ K G A L F + D+NI+ + ++I G+
Sbjct: 449 DAAI-------------YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
R+G+ + A +F +++D + A++ +L + + L
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 374 FVGNSLVNMYAKCGDLEGSALAFCGILEKD-----LVSWNSMLFAFGLHGRANEAMCLFR 428
F +++++ Y K D+ +A+ +EK+ +V++ S++ F G A F+
Sbjct: 556 FTYSTIIDGYVKQQDM-ATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFK 614
Query: 429 EMVASGVKPDEVTFTGML 446
EM + P+ VT+T ++
Sbjct: 615 EMQLRDLVPNVVTYTTLI 632
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 131/331 (39%), Gaps = 27/331 (8%)
Query: 15 IVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
I L + G+ A DE + +++++ +I AY Y + L M
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
KPD +Y + H + ++ G + N L+ K + A+
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 131 VFDEMADSNEV----TWCSLLFAYANSSLFGMALEVFRSMPER---VEIAW-NTMIAGHA 182
+F EM D N + + +L+ + S F A +VF E+ V++ N MI G
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
R G ++ L M E PD++T+S +++ + +DM + ++ K+ +
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 243 VKNSILSFYAKLECPSD---AMEMFNSFG----AFNQVSWNAIIDAHMKLGDT-QKAF-- 292
S+++ + C D A E F N V++ +I + K T +KA
Sbjct: 592 TYTSLINGFC---CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYY 648
Query: 293 --LAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
L N V++ ++ G+ + +G++
Sbjct: 649 WELMMTNKCVPNEVTFNCLLQGFVKKTSGKV 679
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/528 (20%), Positives = 230/528 (43%), Gaps = 28/528 (5%)
Query: 23 RICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ A LF +M P V +N +++A + + ++ +SL M+ D ++YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD- 137
++ S + A ++ GY + +SL++ Y + DA + D+M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 138 ---SNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEAC 190
+ T+ +L+ + A+ + M +R + + T++ G +RG+++
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSF 250
L L K+M + + D ++ +++ + + M + + G + +S++S
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 251 YAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQKAFLAF----QQAPDKN 302
SDA + + N V+++A+IDA +K G +A + +++ D +
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
I +++S+I G+ + + A MF M + + ++ + G +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHG 418
+ +RGL +L++ + + D + + + F + + +++++N +L +G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Query: 419 RANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV 478
+ +AM +F + S ++PD T+ M+ G +++G+ F ++S + G+S +
Sbjct: 483 KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLK-GVSPNVIAY 541
Query: 479 ACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS--YEVLLGACHAHGD 524
M+ R G EA SL KK K G NS Y L+ A GD
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKM-KEDGPLPNSGTYNTLIRARLRDGD 588
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/439 (19%), Positives = 189/439 (43%), Gaps = 54/439 (12%)
Query: 142 TWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFK 195
T+ + + S +AL V M P+ V ++ +++ G+ + + L
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS--SLLNGYCHSKRISDAVALVD 177
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+M E Y+PD +TF+ L +HG + + S A+ + + ++ +
Sbjct: 178 QMVEMGYKPDTFTFTTL---------------IHGLFLHNKASEAVALVDQMV----QRG 218
Query: 256 CPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTSMIV 311
C D V++ +++ K GD A ++ + ++V + ++I
Sbjct: 219 CQPDL------------VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
G + + + AL++F +M I+ D +++ + + + S +I R ++
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLF 427
+ ++L++ + K G L + + ++++ D+ +++S++ F +H R +EA +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 428 REMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGR 487
M++ P+ VT++ ++ ++EG FR MS GL ++ +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYTTLIHGFFQ 445
Query: 488 GGYVAEAQSLAKKYSKTSGARTN--SYEVLLGACHAHGDLGTGSSVGEYLK--TLEPEKE 543
AQ + K+ + G N +Y +LL +G L V EYL+ T+EP+
Sbjct: 446 ARDCDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 544 VGYVMLSNLYCASGQWKEA 562
+M+ + C +G+ ++
Sbjct: 505 TYNIMIEGM-CKAGKVEDG 522
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/545 (20%), Positives = 215/545 (39%), Gaps = 80/545 (14%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D+V + +I+ L+++++ MR ++ P+ +YS L C G +
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE----VTWCSLLFAYA-- 151
++++ G S + NSL+ Y A K+ +M V + L+ +
Sbjct: 361 NMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGD 420
Query: 152 ----NSSLFGMALEVFRSMPERVEIAWNTMIAGHAR----RGEVEACLGLFKEMCESLYQ 203
N L +A + + M + ++ R G+ E + +EM +
Sbjct: 421 KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480
Query: 204 PDQWTFSALMN-ACTESRDML-------------------YGCMVHGFVIKSG------- 236
PD T+S ++N C S+ L Y MV F K+G
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC-KAGLIEQARK 539
Query: 237 WSSAME---------VKNSILSFYAKLECPSDAMEMFNSF---GAF-NQVSWNAIIDAHM 283
W + M +++ Y K + S A E+F + G N V+++A+ID H
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 284 KLGDTQKAFLAFQQ------APD--------------KNIVSWTSMIVGYTRNGNGELAL 323
K G +KA F++ PD N+V++ +++ G+ ++ E A
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
+ M+ + + +V A++ + L + V + + G L+ +SL++ Y
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 384 AKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDE 439
K + ++ +LE ++V + M+ G+ +EA L + M G +P+
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 440 VTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAK 499
VT+T M+ +G I+ M S+ G++ ++D + G + A +L +
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 500 KYSKT 504
+ +T
Sbjct: 839 EMKQT 843
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 106/491 (21%), Positives = 198/491 (40%), Gaps = 69/491 (14%)
Query: 11 TTSKIVS-LARSGRICHARKLFDEMPD----RDSVAWNAMITAYSHLGLYQQSLSLFGSM 65
T SK+++ L + ++ A LF+EM D + M+ ++ GL +Q+ F M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 66 RISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKP 125
R P+ +Y+A + A + + + ++ G ++ ++LID + K +
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 126 HDARKVFDEMADSNEVTWCSLLFA-YANSSLFGMALEVFRSMPERVE-IAWNTMIAGHAR 183
A ++F+ M S +V + F Y ++S ER + + ++ G +
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNS-------------ERPNVVTYGALLDGFCK 651
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
VE L M +P+Q + AL++ + + V + + G+ + +
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT 711
Query: 244 KNSILSFYAKLECPSDA----MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
+S++ Y K++ A +M + A N V + +ID K+G T +A+ Q
Sbjct: 712 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME 771
Query: 300 DK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVL--HACASLAI 353
+K N+V++T+MI G+ G E L + M + N V VL H C + A+
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVA-PNYVTYRVLIDHCCKNGAL 830
Query: 354 -LAHGKM---------VHSCIIRR---GLDK-------------------YLFVGNSLVN 381
+AH + H+ R+ G +K +L V L++
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLID 890
Query: 382 MYAKCGDLE------GSALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGV 435
K LE F L ++NS++ + L + A LF EM GV
Sbjct: 891 NLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGV 950
Query: 436 KPDEVTFTGML 446
P+ +F ++
Sbjct: 951 IPEMQSFCSLI 961
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 173/475 (36%), Gaps = 94/475 (19%)
Query: 15 IVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
I L GR+ A L ++M + D V + ++ +G + +L+L M ++
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
KPD YSA + HH DA+
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHS-----------------------------------DAQY 317
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
+F EM + G+A VF +N MI G G
Sbjct: 318 LFSEMLEK------------------GIAPNVF---------TYNCMIDGFCSFGRWSDA 350
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTES----------RDMLYGCMVHGFVIKSGWSSA 240
L ++M E PD TF+AL++A + +ML+ C+ V
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV-------- 402
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD 300
NS++ + K DA MF+ + + V++N IID + + + ++
Sbjct: 403 --TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 301 K----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAH 356
+ N ++ ++I G+ N A +F +M + + D + +L+ L
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLF 412
+ I +D N +++ K ++ + FC + +E D+ ++N M+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 413 AFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
F ++A LF +M +G +PD T+ ++ C G ID+ M S
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 164/375 (43%), Gaps = 39/375 (10%)
Query: 127 DARKVFDEMADSNE----VTWCSLLFAYANSSLFGMALEVFRSMP-ERVEI---AWNTMI 178
DA FD M S V ++ + + +A+ ++R M R+ + ++N +I
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 179 AGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA-CTESRD----MLYGCMVH-GFV 232
++ L F ++ + +QPD TF+ L++ C E R L+G MV GF+
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 233 ---------IKSGWSSAMEVKNSILSFYA----KLECPSDAMEMFNSFGAFNQVSWNAII 279
++ G + + N++++ LE + +M + V++ I+
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 280 DAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
+ K+GDT+ A + + +I V ++++I ++G+ A +F +M I
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+ ++ S + + + +I R ++ + N+L++ K G L +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 396 FCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSH 451
+L + D V++NSM++ F H R ++A +F +++AS PD VTF ++
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS---PDVVTFNTIIDVYCR 444
Query: 452 LGLIDEGFAFFRSMS 466
+DEG R +S
Sbjct: 445 AKRVDEGMQLLREIS 459
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/487 (21%), Positives = 207/487 (42%), Gaps = 39/487 (8%)
Query: 103 SGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE----VTWCSLLFAYANSSLFGM 158
GYR L N+L+ LK +A +F EM S V + LL A A F +
Sbjct: 30 DGYREKLS-RNALLH-----LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDL 83
Query: 159 ALEVFRSMPERVEI--------AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFS 210
+ S E++EI +N MI RR ++ L + +M + Y P T +
Sbjct: 84 VI----SFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLN 139
Query: 211 ALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF 270
+L+N + + +++ G+ +++ + S+A+ +
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 271 ----NQVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTSMIVGYTRNGNGELA 322
+ V++ A+I+ K G+ A + + ++V ++++I + + + A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 323 LSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNM 382
L++F +M I+ D +++ + + + S ++ R ++ + NSL++
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 383 YAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPD 438
+AK G L + F ++++ ++V++NS++ F +H R +EA +F MV+ PD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 439 EVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLA 498
VT+ ++ + +G FR MS GL ++ + AQ +
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 499 KKYSKTSGARTN--SYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEV-GYVMLSNLYCA 555
K+ + G N +Y LL +G L V EYL+ + E ++ Y ++S C
Sbjct: 439 KQMV-SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 556 SGQWKEA 562
+G+ ++
Sbjct: 498 AGKVEDG 504
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 110/530 (20%), Positives = 226/530 (42%), Gaps = 32/530 (6%)
Query: 23 RICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ A LF EM P V ++ +++A + + + +S M I + ++Y+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD- 137
++ S F I ++ GY S+ NSL++ + + +A + D+M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 138 ---SNEVTWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVE 188
+ VT+ +L+ + A+ + M P+ V + +I G +RGE +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV--TYGAVINGLCKRGEPD 222
Query: 189 ACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSIL 248
L L +M + + D +S ++++ + R + + + G + +S++
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 249 SFYAKLECPSDA----MEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAF----QQAPD 300
S SDA +M N V++N++IDA K G +A F Q++ D
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 301 KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMV 360
NIV++ S+I G+ + + A +F M D + +++ + G +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGL 416
+ RRGL +L++ + + D + + + F + + +++++N++L
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMD 476
+G+ +AM +F + S ++PD T+ M G +++G+ F S+S + G+ +
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVI 521
Query: 477 HVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNS--YEVLLGACHAHGD 524
M+ + G EA +L K K G +S Y L+ A GD
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKM-KEDGPLPDSGTYNTLIRAHLRDGD 570
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/575 (19%), Positives = 234/575 (40%), Gaps = 65/575 (11%)
Query: 15 IVSLARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRIS-N 69
++ L RSG +K+ ++M + + + +I +Y+ L + LS+ M
Sbjct: 90 LLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFG 149
Query: 70 SKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
KPD+ Y+ L+ G+ + HA + V G + + N LI + + A
Sbjct: 150 LKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 130 KVFDEMAD----SNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGH 181
+ ++M +E T+ +++ Y AL + M E ++ N ++ G
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 182 ARRGEVEACLGLFKEMC-ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSA 240
+ G VE L +EM + + PDQ+TF+ L+N ++ + + + +++ G+
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSF----GAFNQVSWNAIIDAHMKLGDTQKAFLAFQ 296
+ NS++S KL +A+E+ + + N V++N +I K ++A +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 297 QAPDKNIV----SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD--------------- 337
K I+ ++ S+I G N +A+ +F +M + D
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 338 ------NLVAGAVLHACASLAILAHGKMVHSCIIRR--------------GLDKYLFVGN 377
N++ L CA I + + C + G+ + N
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 378 SLVNMYAKCGDLEGSALAFCGIL----EKDLVSWNSMLFAFGLHGRANEAMCLFREMVAS 433
+L++ K +E +A ++ + D ++NS+L F G +A + + M ++
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Query: 434 GVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAE 493
G +PD VT+ ++ G ++ RS+ + G++ ++ L R E
Sbjct: 570 GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK-GINLTPHAYNPVIQGLFRKRKTTE 628
Query: 494 AQSLAKKYSKTSGARTN--SYEVLL-GACHAHGDL 525
A +L ++ + + A + SY ++ G C+ G +
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/483 (20%), Positives = 189/483 (39%), Gaps = 68/483 (14%)
Query: 109 LPVANSLIDMYGKCLKP--HDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSM 166
L V + +ID +G LKP H ++ + + D N + + ++A S++G+ +V
Sbjct: 138 LSVVDWMIDEFG--LKPDTHFYNRMLNLLVDGNSLKLVEI--SHAKMSVWGIKPDVS--- 190
Query: 167 PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGC 226
+N +I R ++ + + ++M PD+ TF+ +M E D+
Sbjct: 191 ------TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 227 MVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM----EMFNSFGAF-NQVSWNAIIDA 281
+ +++ G S + N I+ + K DA+ EM N G F +Q ++N +++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 282 HMKLGDTQKAF----LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLD 337
K G + A + Q+ D ++ ++ S+I G + G + A+ + M
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-------- 356
Query: 338 NLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE-----GS 392
I R N+L++ K +E
Sbjct: 357 ---------------------------ITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 393 ALAFCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHL 452
L GIL D+ ++NS++ L AM LF EM + G +PDE T+ ++ +
Sbjct: 390 VLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 453 GLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN-S 511
G +DE + M G + + ++D + EA+ + + +R + +
Sbjct: 449 GKLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 512 YEVLL-GACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEML 570
Y L+ G C + + + + + + Y L +C G K+A + + M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 571 DQG 573
G
Sbjct: 568 SNG 570
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 135/323 (41%), Gaps = 30/323 (9%)
Query: 274 SWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV----SWTSMIVGYTRNGNGELALSMFLDM 329
++N +I A + + A L + P +V ++T+++ GY G+ + AL + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 330 TRNSIQLDNLVAGAVLHA-CASLAILAHGKMVHSCIIRRGL--DKYLFVGNSLVNMYAKC 386
N+ ++H C + + + G D+Y F N+LVN K
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF--NTLVNGLCKA 308
Query: 387 GDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTF 442
G ++ + +L++ D+ ++NS++ G EA+ + +M+ P+ VT+
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 443 TGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKY- 501
++ T ++E R ++S+ G+ C + L +G + +A +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSK-----GILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 502 ----SKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLE----PEKEVGYVMLSNLY 553
SK +Y +L+ + + G L ++ LK +E + Y L + +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM---LKQMELSGCARSVITYNTLIDGF 480
Query: 554 CASGQWKEAEIVRKEMLDQGVKK 576
C + + +EAE + EM GV +
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSR 503
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 113/566 (19%), Positives = 211/566 (37%), Gaps = 83/566 (14%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSH 89
+ D P + V + +I + G ++ LF M +PD +YS +
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 90 HGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM----ADSNEVTWCS 145
G G + + + G + + V +S ID+Y K A V+ M N VT+
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 146 LLFAYANS----SLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESL 201
L+ FGM ++ + E + ++++I G + G + + L+++M +
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 202 YQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM 261
Y PD + L++ ++ ML+ ++ + V NS++ + +L +A+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGEL 321
++F G + A M++ + AF ++ +
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEDAF---------------------CKHMKPTI 555
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
L +F M RN I D V V+H
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIH----------------------------------- 580
Query: 382 MYAKCGDLEGSALAFC----GILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
+ KC +E ++ F G +E D+V++N+M+ + R +EA +F + + P
Sbjct: 581 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 640
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAFFRSM----SSEFGLSHG--MDHVACMVDMLGRGGYV 491
+ VT T ++ +D F M S +++G MD + VD+ G
Sbjct: 641 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 700
Query: 492 AEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYL--KTLEPEKEVGYVML 549
E Q K SY +++ G + +++ L P+ V Y +L
Sbjct: 701 EEMQ------EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD-VVAYAIL 753
Query: 550 SNLYCASGQWKEAEIVRKEMLDQGVK 575
YC G+ EA ++ + ML GVK
Sbjct: 754 IRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/369 (19%), Positives = 152/369 (41%), Gaps = 57/369 (15%)
Query: 18 LARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
L++ G + HA + +M + + V +N++I + L + ++L +F M I KPD
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 74 SFSYSAAL------SACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
+++ + A G + L+ + + + V N +I + KC + D
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 128 ARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEV 187
A K F+ + + + P+ V +NTMI G+ +
Sbjct: 591 ASKFFNNLIEG-------------------------KMEPDIV--TYNTMICGYCSLRRL 623
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSI 247
+ +F+ + + + P+ T + L++ ++ DM + + + G +
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 683
Query: 248 LSFYAKLECPSDAMEMFNSFGAFNQ----------VSWNAIIDAHMKLGDTQKAFLAFQQ 297
+ +++K ++++ SF F + VS++ IID K G +A F Q
Sbjct: 684 MDWFSK------SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 298 APD----KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAI 353
A D ++V++ +I GY + G A ++ M RN ++ D+L+ A+ +
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWL 797
Query: 354 LAHGKMVHS 362
++ G VH
Sbjct: 798 MSKGVWVHD 806
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 293 LAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLA 352
L P N+V++ ++I G+ + G + A +F M + I+ D + ++
Sbjct: 276 LVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAG 335
Query: 353 ILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAF----CGILEKDLVSWN 408
+L G + S + +G+ + V +S +++Y K GDL +++ + C + ++V++
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Query: 409 SMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
++ GR EA ++ +++ G++P VT++ ++ G + GFA + M +
Sbjct: 396 ILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IK 454
Query: 469 FGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
G + +VD L + G + A + K
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/455 (19%), Positives = 192/455 (42%), Gaps = 38/455 (8%)
Query: 20 RSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSF 75
++G + KLF + + D V +++ I Y G + ++ M P+
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 76 SYSAALSA-CAGGS-HHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
+Y+ + C G + FG ++ ++ G S+ +SLID + KC +++
Sbjct: 393 TYTILIKGLCQDGRIYEAFG--MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 134 EMAD----SNEVTWCSLLFAYANSSLFGMALEV-FRSMPERVE---IAWNTMIAGHARRG 185
+M + V + L+ + L A+ + + + + + +N++I G R
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNA-------CTESRDMLYGCMVHGFVIKSGWS 238
+ L +F+ M +PD TF+ +M C + + G + + ++ S
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI-GLQLFDLMQRNKIS 569
Query: 239 SAMEVKNSILSFYAKLECPSDAMEMFNSF--GAFNQ--VSWNAIIDAH---MKLGDTQKA 291
+ + V N ++ K DA + FN+ G V++N +I + +L + ++
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 292 FLAFQQAP-DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLH-ACA 349
F + P N V+ T +I +N + + A+ MF M + + + G ++
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 350 SLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE----KDLV 405
S+ I K+ + +G+ + + +++ K G ++ + F ++ D+V
Sbjct: 690 SVDIEGSFKLFEE-MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748
Query: 406 SWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
++ ++ + GR EA L+ M+ +GVKPD++
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSW 407
C + L ++VH CI Y ++++ MY+ C + + F + +++ +W
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSY----HTVIEMYSGCRSTDDALNVFNEMPKRNSETW 177
Query: 408 NSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
+M+ +G A+ +F + G KPD+ F + C +G I+EG F SM
Sbjct: 178 GTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYR 237
Query: 468 EFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGT 527
++G+ M+ +++ML G++ EA ++ T +E L+ C G L
Sbjct: 238 DYGMVLSMEDYVNVIEMLAACGHLDEALDFVERM--TVEPSVEMWETLMNLCWVQGYLEL 295
Query: 528 GSSVGEYLKTLEPEK 542
G E +K L+ +
Sbjct: 296 GDRFAELIKKLDASR 310
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%)
Query: 103 SGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLFGMALEV 162
GY P L + G+ +AR V D + + ++ +++ Y+ AL V
Sbjct: 106 KGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNV 165
Query: 163 FRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM 222
F MP+R W TMI A+ GE E + +F E +PD+ F A+ AC D+
Sbjct: 166 FNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDI 225
Query: 223 LYGCM 227
G +
Sbjct: 226 NEGLL 230
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 253 KLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVG 312
++E +A + + + S++ +I+ + T A F + P +N +W +MI
Sbjct: 124 EVEALEEARVVHDCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRC 183
Query: 313 YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY 372
+NG GE A+ MF + D + AV AC S+ + G ++H + R
Sbjct: 184 LAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEG-LLHFESMYRDYGMV 242
Query: 373 LFVGN--SLVNMYAKCGDLEGSALAFCG--ILEKDLVSWNSML 411
L + + +++ M A CG L+ AL F +E + W +++
Sbjct: 243 LSMEDYVNVIEMLAACGHLD-EALDFVERMTVEPSVEMWETLM 284
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/496 (20%), Positives = 181/496 (36%), Gaps = 95/496 (19%)
Query: 15 IVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
I L GR+ A L ++M + D V + ++ +G + +L+L M ++
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
KPD YSA + HH DA+
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHS-----------------------------------DAQY 317
Query: 131 VFDEMADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEAC 190
+F EM + G+A VF +N MI G G
Sbjct: 318 LFSEMLEK------------------GIAPNVF---------TYNCMIDGFCSFGRWSDA 350
Query: 191 LGLFKEMCESLYQPDQWTFSALMNACTES----------RDMLYGCMVHGFVIKSGWSSA 240
L ++M E PD TF+AL++A + +ML+ C+ V
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV-------- 402
Query: 241 MEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD 300
NS++ + K DA MF+ + + V++N IID + + + ++
Sbjct: 403 --TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 301 K----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAH 356
+ N ++ ++I G+ N A +F +M + + D + +L+ L
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 357 GKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLF 412
+ I +D N +++ K ++ + FC + +E D+ ++N M+
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 413 AFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLS 472
F ++A LF +M +G +PD T+ ++ C G ID+ M S G S
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN-GFS 639
Query: 473 HGMDHVACMVDMLGRG 488
+ + D++ G
Sbjct: 640 GDAFTIKMVADLITDG 655
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 161/375 (42%), Gaps = 39/375 (10%)
Query: 127 DARKVFDEMADSNE----VTWCSLLFAYANSSLFGMALEVFRSMP-ERVEI---AWNTMI 178
DA FD M S V ++ + + +A+ ++R M R+ + ++N +I
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 179 AGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA-CTESRD----MLYGCMVH-GFV 232
++ L F ++ + +QPD TF+ L++ C E R L+G MV GF+
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 233 ---------IKSGWSSAMEVKNSILSFYA----KLECPSDAMEMFNSFGAFNQVSWNAII 279
++ G + + N++++ LE + +M + V++ I+
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 280 DAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
+ K+GDT+ A + + +I V ++++I ++G+ A +F +M I
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+ ++ S + + + +I R ++ + N+L++ K G L +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 396 FCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSH 451
+L + D V++NSM++ F H R ++A +F M + PD VTF ++
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCR 444
Query: 452 LGLIDEGFAFFRSMS 466
+DEG R +S
Sbjct: 445 AKRVDEGMQLLREIS 459
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 2/195 (1%)
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSW 407
C L K VH I L + L+ MY+ CG +A F + EK+L +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 408 NSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSS 467
++ F +G +A+ +F G PD F G+ C LG +DEG F SMS
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 468 EFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGT 527
++G++ ++ +V+M G++ EA ++ + +E L+ HG+L
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPN--VDVWETLMNLSRVHGNLEL 441
Query: 528 GSSVGEYLKTLEPEK 542
G E ++ L+P +
Sbjct: 442 GDYCAEVVEFLDPTR 456
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 210/495 (42%), Gaps = 93/495 (18%)
Query: 17 SLARSGRICHARKLFDEM------PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
++++ GR+ ++L +M P+R V +N ++ Y LG +++ + M+ +N
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNR--VTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 71 KPDSFSYSAALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR 129
PD +Y+ ++ C GS ++ A+ + + + N+LID + +AR
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLK-LQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 130 KVFDEMAD----SNEVTWCSLLFAYANSSLFGMALE-----VFRSMPERVE--------I 172
K+ ++M + +N+VT N SL + E V R + E V+ +
Sbjct: 366 KLMEQMENDGVKANQVTH--------NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA-CTESR-----DMLYGC 226
++T+I + + G++ L + +EM + + + T + +++A C E + ++L
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 227 MVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQV----SWNAIIDAH 282
GF++ + I+ F+ + E A+EM++ ++N++I
Sbjct: 478 HKRGFIVDEVTYGTL-----IMGFFRE-EKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 283 MKLGDTQKAFLAFQQAPDKNIV----SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDN 338
G T+ A F + + ++ ++ S+I+GY + G E A + + ++S + DN
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 339 LVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCG 398
++C N L+N K G E + F
Sbjct: 592 ----------------------YTC-------------NILLNGLCKEGMTEKALNFFNT 616
Query: 399 ILEK---DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
++E+ D V++N+M+ AF + EA L EM G++PD T+ + G +
Sbjct: 617 LIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKL 676
Query: 456 DEGFAFFRSMSSEFG 470
E + S +FG
Sbjct: 677 SETDELLKKFSGKFG 691
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 191/450 (42%), Gaps = 61/450 (13%)
Query: 22 GRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSY 77
G I + R +F+ M + V++NA++ AY+ G+ +LS+ G ++ + PD SY
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ L++ G + ++ + ++ N+LID YG +A ++F +M
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 138 ----SNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEA 189
N V+ C+LL A + S V + R A+N+ I + E+E
Sbjct: 322 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 381
Query: 190 CLGLFKEMCESLYQPDQWTFSALMN-ACTESRDMLYGCMVHGFVIKSGWSSAM--EVKNS 246
+ L++ M + + D TF+ L++ +C S+ Y + S + EV +S
Sbjct: 382 AIALYQSMRKKKVKADSVTFTILISGSCRMSK---YPEAISYLKEMEDLSIPLTKEVYSS 438
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
+L Y+K ++A +FN MK+ + PD ++++
Sbjct: 439 VLCAYSKQGQVTEAESIFN----------------QMKMAGCE---------PD--VIAY 471
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
TSM+ Y + A +FL+M N I+ D++ A++ A G + +
Sbjct: 472 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA------FNKGGQPSNVFVL 525
Query: 367 RGL---DKYLFVGNSLVNMYAKCGDLE--GSALAFCGILEKDLVSW-----NSMLFAFGL 416
L + F G +++ C L+ A+ +++ L S N ML FG
Sbjct: 526 MDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGK 585
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGML 446
G+ M LF +++ASGV + T+ +L
Sbjct: 586 SGKVEAMMKLFYKIIASGVGINLKTYAILL 615
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 189/449 (42%), Gaps = 28/449 (6%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N MI ++ Q+ LF M+ + KPD+ +Y A ++A + + ++
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS----NEVTWCSLLFAYANSSLFG 157
+ S N+LI+ G +A +V +M D+ + VT +L AY + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 158 MALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ--PDQWTF 209
AL F M P+ +N +I ++ G+ L LF M E + PD TF
Sbjct: 134 KALSYFELMKGAKVRPDTT--TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGA 269
+++M+ + ++ V ++ G + N+++ YA A+ +
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 270 ----FNQVSWNAIIDAH---MKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGYTRNGNGEL 321
+ VS+ +++++ + G ++ FL ++ K N+V++ ++I Y NG
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A+ +F M ++ I+ + + +L AC+ + V S RG++ NS +
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG-----RANEAMCLFREMVASGVK 436
Y +LE A+A + K V +S+ F + G + EA+ +EM +
Sbjct: 372 SYINAAELE-KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIP 430
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSM 465
+ ++ +L S G + E + F M
Sbjct: 431 LTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 176/419 (42%), Gaps = 31/419 (7%)
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
++ +I H R G+ + L +M + P + T++ L+NAC S + V +
Sbjct: 49 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 108
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQ 289
+G + N +LS Y S A+ F + ++N II KLG +
Sbjct: 109 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 168
Query: 290 KAFLAFQQAPDK------NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
+A F +K ++V++TS++ Y+ G E ++F M ++ + + A
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
++ A A + V I + G+ + L+N Y + G A ++ K+
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ-PGKAKEVFLMMRKE 287
Query: 404 -----LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL---I 455
+V++N+++ A+G +G EA+ +FR+M G+KP+ V+ +L CS +
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 347
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVL 515
D + +S + + ++ +A QS+ KK K A + ++ +L
Sbjct: 348 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK---ADSVTFTIL 404
Query: 516 L-GACHAHGDLGTGSSVGEYLKTLE----PEKEVGYVMLSNLYCASGQWKEAEIVRKEM 569
+ G+C + YLK +E P + Y + Y GQ EAE + +M
Sbjct: 405 ISGSCR----MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 186/447 (41%), Gaps = 69/447 (15%)
Query: 28 RKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA-- 85
+K+ D D V N +++AY Y ++LS F M+ + +PD+ +++ + +
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 164
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA----DSNEV 141
G S + R + S++ +Y + + R VF+ M N V
Sbjct: 165 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 224
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEI----AWNTMIAGHARRGEVEACLGLFKEM 197
++ +L+ AYA + G AL V + + I ++ ++ + R + +F M
Sbjct: 225 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS-GWSSAME---VKNSILSFYAK 253
+ +P+ T++AL++A YG +GF+ ++ ME +K +++S
Sbjct: 285 RKERRKPNVVTYNALIDA--------YGS--NGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 254 LECPSDAMEMFN---------SFGA-FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
L S + + N S G N ++N+ I +++ + +KA +Q K +
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 304 ----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
V++T +I G R A+S +M SI L V +VL A + G++
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK-----QGQV 449
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGR 419
+ S+ N G E D++++ SML A+ +
Sbjct: 450 TEA--------------ESIFNQMKMAG------------CEPDVIAYTSMLHAYNASEK 483
Query: 420 ANEAMCLFREMVASGVKPDEVTFTGML 446
+A LF EM A+G++PD + + ++
Sbjct: 484 WGKACELFLEMEANGIEPDSIACSALM 510
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 191/450 (42%), Gaps = 61/450 (13%)
Query: 22 GRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSY 77
G I + R +F+ M + V++NA++ AY+ G+ +LS+ G ++ + PD SY
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 78 SAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
+ L++ G + ++ + ++ N+LID YG +A ++F +M
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 138 ----SNEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEA 189
N V+ C+LL A + S V + R A+N+ I + E+E
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 190 CLGLFKEMCESLYQPDQWTFSALMN-ACTESRDMLYGCMVHGFVIKSGWSSAM--EVKNS 246
+ L++ M + + D TF+ L++ +C S+ Y + S + EV +S
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSK---YPEAISYLKEMEDLSIPLTKEVYSS 570
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
+L Y+K ++A +FN MK+ + PD ++++
Sbjct: 571 VLCAYSKQGQVTEAESIFN----------------QMKMAGCE---------PD--VIAY 603
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
TSM+ Y + A +FL+M N I+ D++ A++ A G + +
Sbjct: 604 TSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRA------FNKGGQPSNVFVL 657
Query: 367 RGL---DKYLFVGNSLVNMYAKCGDLE--GSALAFCGILEKDLVSW-----NSMLFAFGL 416
L + F G +++ C L+ A+ +++ L S N ML FG
Sbjct: 658 MDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGK 717
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGML 446
G+ M LF +++ASGV + T+ +L
Sbjct: 718 SGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 189/449 (42%), Gaps = 28/449 (6%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N MI ++ Q+ LF M+ + KPD+ +Y A ++A + + ++
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS----NEVTWCSLLFAYANSSLFG 157
+ S N+LI+ G +A +V +M D+ + VT +L AY + +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 158 MALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ--PDQWTF 209
AL F M P+ +N +I ++ G+ L LF M E + PD TF
Sbjct: 266 KALSYFELMKGAKVRPDTT--TFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGA 269
+++M+ + ++ V ++ G + N+++ YA A+ +
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 270 ----FNQVSWNAIIDAH---MKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGYTRNGNGEL 321
+ VS+ +++++ + G ++ FL ++ K N+V++ ++I Y NG
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
A+ +F M ++ I+ + + +L AC+ + V S RG++ NS +
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 382 MYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG-----RANEAMCLFREMVASGVK 436
Y +LE A+A + K V +S+ F + G + EA+ +EM +
Sbjct: 504 SYINAAELE-KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIP 562
Query: 437 PDEVTFTGMLMTCSHLGLIDEGFAFFRSM 465
+ ++ +L S G + E + F M
Sbjct: 563 LTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 176/419 (42%), Gaps = 31/419 (7%)
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
++ +I H R G+ + L +M + P + T++ L+NAC S + V +
Sbjct: 181 YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMT 240
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQ 289
+G + N +LS Y S A+ F + ++N II KLG +
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSS 300
Query: 290 KAFLAFQQAPDK------NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
+A F +K ++V++TS++ Y+ G E ++F M ++ + + A
Sbjct: 301 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
++ A A + V I + G+ + L+N Y + G A ++ K+
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ-PGKAKEVFLMMRKE 419
Query: 404 -----LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL---I 455
+V++N+++ A+G +G EA+ +FR+M G+KP+ V+ +L CS +
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNV 479
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVL 515
D + +S + + ++ +A QS+ KK K A + ++ +L
Sbjct: 480 DTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVK---ADSVTFTIL 536
Query: 516 L-GACHAHGDLGTGSSVGEYLKTLE----PEKEVGYVMLSNLYCASGQWKEAEIVRKEM 569
+ G+C + YLK +E P + Y + Y GQ EAE + +M
Sbjct: 537 ISGSCR----MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 186/447 (41%), Gaps = 69/447 (15%)
Query: 28 RKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACA-- 85
+K+ D D V N +++AY Y ++LS F M+ + +PD+ +++ + +
Sbjct: 237 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKL 296
Query: 86 GGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA----DSNEV 141
G S + R + S++ +Y + + R VF+ M N V
Sbjct: 297 GQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIV 356
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPERVEI----AWNTMIAGHARRGEVEACLGLFKEM 197
++ +L+ AYA + G AL V + + I ++ ++ + R + +F M
Sbjct: 357 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 198 CESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKS-GWSSAME---VKNSILSFYAK 253
+ +P+ T++AL++A YG +GF+ ++ ME +K +++S
Sbjct: 417 RKERRKPNVVTYNALIDA--------YGS--NGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 254 LECPSDAMEMFN---------SFGA-FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI 303
L S + + N S G N ++N+ I +++ + +KA +Q K +
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 304 ----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKM 359
V++T +I G R A+S +M SI L V +VL A + G++
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSK-----QGQV 581
Query: 360 VHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHGR 419
+ S+ N G E D++++ SML A+ +
Sbjct: 582 TEA--------------ESIFNQMKMAG------------CEPDVIAYTSMLHAYNASEK 615
Query: 420 ANEAMCLFREMVASGVKPDEVTFTGML 446
+A LF EM A+G++PD + + ++
Sbjct: 616 WGKACELFLEMEANGIEPDSIACSALM 642
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 112/571 (19%), Positives = 234/571 (40%), Gaps = 72/571 (12%)
Query: 12 TSKIVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRI 67
T+ + L ++G + A + +M ++ + V +++MI Y G+ ++++SL M
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Query: 68 SNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHD 127
N P+ F+Y + + + + G + + ++L++ + + +
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Query: 128 ARKVFDEMADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIA 179
+ + +M +++ + SL+ + AL M ER +++N +I+
Sbjct: 488 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Query: 180 GHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDM----------------- 222
G + G+V A +K M E +PD TF+ +MN+ + D
Sbjct: 548 GMLKFGKVGADWA-YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 606
Query: 223 -LYGC-MVHGFVIKSGWSSA----------MEVKNSILSFYAKLECPS-----DAM---- 261
L C +V G + ++G ME+ ++ ++ L+ S DA+
Sbjct: 607 SLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH 666
Query: 262 EMFNSFG-AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGYTRN 316
E S+G ++ +N +I KLG T+KA + + + V++ S++ GY
Sbjct: 667 ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVG 726
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
+ ALS + M I + ++ + ++ S + RG+ F
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTY 786
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDLV----SWNSMLFAFGLHGRANEAMCLFREMVA 432
N+L++ AK G+++GS +C ++ LV ++N ++ F G+ +A L +EM
Sbjct: 787 NALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGK 846
Query: 433 SGVKPDEVTF----TGMLMTCSHLGL--------IDEGFAFFRSMSSEFGLSHGMDHVAC 480
GV P+ T+ +G+ C+H + + E + M E G +
Sbjct: 847 RGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYW 906
Query: 481 MVDMLGRGGYVAEAQSLAKKYSKTSGARTNS 511
+ + G +A+ K+ K AR+++
Sbjct: 907 ISAAFSKPGMKVDAERFLKECYKKKNARSSN 937
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 127/595 (21%), Positives = 236/595 (39%), Gaps = 73/595 (12%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D A N +I ++ +G ++SL + IS D+ +Y+ +S G HG +
Sbjct: 128 DVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVIS---GLCEHGLADEAY 181
Query: 98 ALV---VVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSS 154
+ V G N+LID + K A+ + DE+++ N +T LL +Y N
Sbjct: 182 QFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYN-- 239
Query: 155 LFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
E +R M P+ V ++++I + G+V L +EM E P+ T
Sbjct: 240 -LHAIEEAYRDMVMSGFDPDVV--TFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVT 296
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
++ L+++ ++ + ++ ++ G + V ++ K +A + F
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356
Query: 269 AFNQV----SWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGYTRNGNGE 320
NQV ++ A++D K GD A Q +K N+V+++SMI GY + G E
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHACASL--------------------------AIL 354
A+S+ M ++ + G V+ A++
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476
Query: 355 AHGKMVHSCIIRRGLDKYLFVG---------NSLVNMYAKCGDLEGSALAFCGILEK--- 402
H K + +GL K + SL++++ K GD E + + E+
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 403 -DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
D+VS+N ++ G+ A ++ M G++PD TF M+ + G +
Sbjct: 537 WDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 462 FRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEA-QSLAKKYSKTSGARTNSYEVLLGACH 520
+ M S G+ + +V ML G + EA L + +Y + L
Sbjct: 596 WDKMKS-CGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 521 AHGDLGTGSSVGEYLKT--LEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQG 573
H E L + ++ ++V +++ L C G K+A +V +M +G
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL-CKLGMTKKAAMVMGDMEARG 708
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/450 (18%), Positives = 181/450 (40%), Gaps = 43/450 (9%)
Query: 36 DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSV 95
D D V ++++I G + L M + P+ +Y+ + + + +
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 96 IHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE----VTWCSLLFAYA 151
+++ +VV G L V L+D K +A K F + + N+ VT+ +L+
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 152 NSSLFGMALEVFRSMPERVEI----AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQW 207
+ A + M E+ I +++MI G+ ++G +E + L ++M + P+ +
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 208 TFSALMN----------ACTESRDM-LYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
T+ +++ A S++M L G + +++ + + N + E
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA-------LVNHLKRIGRIKEV 488
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVG 312
+M + +Q+++ ++ID K GD + A ++ ++ ++VS+ +I G
Sbjct: 489 KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISG 548
Query: 313 YTRNGNGELALSMFLDMTRNSIQLD----NLVAGAVLHACASLAILAHGKMVHSCIIRRG 368
+ G A + M I+ D N++ + S IL + SC G
Sbjct: 549 MLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC----G 603
Query: 369 LDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAM 424
+ L N +V M + G +E + + + +L ++ L H RA+
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 425 CLFREMVASGVKPDEVTFTGMLMTCSHLGL 454
+++ G+K + ++ T LG+
Sbjct: 664 KTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 137/330 (41%), Gaps = 38/330 (11%)
Query: 275 WNAIID-------AHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFL 327
WN++I H ++ +A +PD + + +I + + G A+S+
Sbjct: 96 WNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPD--VFALNVLIHSFCKVGRLSFAISLLR 153
Query: 328 D--MTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAK 385
+ ++ +++ + +++G H A A +MV I+ + N+L++ + K
Sbjct: 154 NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY-----NTLIDGFCK 208
Query: 386 CGDLEGSALAFCGILEKDLVSWNSMLFAF-GLHGRANEAMCLFREMVASGVKPDEVTFTG 444
G+ + I E +L++ +L ++ LH EA +R+MV SG PD VTF+
Sbjct: 209 VGNFVRAKALVDEISELNLITHTILLSSYYNLHA-IEEA---YRDMVMSGFDPDVVTFSS 264
Query: 445 MLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHV--ACMVDMLGRGGYVAEAQSL-AKKY 501
++ G + EG R M +S +HV +VD L + A +L ++
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEE---MSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV 321
Query: 502 SKTSGARTNSYEVLLGACHAHGDLGTGSSVGE-YLKTLEPEKEVGYVMLSNLYCASGQWK 560
+ Y VL+ GDL + L+ + V Y L + C +G
Sbjct: 322 VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLS 381
Query: 561 EAEIVRKEMLDQGVKKVPGSSWIEIRNVVT 590
AE + +ML++ V I NVVT
Sbjct: 382 SAEFIITQMLEKSV----------IPNVVT 401
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 111/520 (21%), Positives = 204/520 (39%), Gaps = 102/520 (19%)
Query: 49 YSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSS 108
Y G Q+++++F M + +P FSY+A +S G+ H + + R
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLV---DSGYFDQAHKVYMRMRDRGI 142
Query: 109 LPVANSL---IDMYGKCLKPHDARKVFDEMA----DSNEVTWCSLL-------FAYANSS 154
P S + + K +PH A ++ + M+ + N V +C+++ F
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 155 LFGMAL------------EVFRSMPERVEI--------------------AWNTMIAGHA 182
LFG L ++ R + ++ ++ +N I G
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAME 242
+RGE++ + + + E +PD T++ L+ ++ + G ++ G
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 243 VKNSILSFYAK-------LECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAF 295
N++++ Y K DA+ FN F +Q ++ ++ID G+T +A F
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAV--FNGF-VPDQFTYRSLIDGLCHEGETNRALALF 379
Query: 296 QQAPDK----NIVSWTSMIVGYTRNG----NGELALSMFLDMTRNSIQLDN-LVAGAVLH 346
+A K N++ + ++I G + G +LA M +Q N LV G
Sbjct: 380 NEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 347 ACASLA--------------------ILAHG-----KM-----VHSCIIRRGLDKYLFVG 376
C S A IL HG KM + ++ G+D ++
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVA 432
NSL+N K E + ++EK +L ++N +L + + + +EA+ L EM
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLS 472
V PD VTF ++ G +D + FR M + +S
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/442 (21%), Positives = 184/442 (41%), Gaps = 41/442 (9%)
Query: 30 LFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSH 89
L ++ P D + +N +I +Q++ G M +PDS++Y+ ++ G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 90 HGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDAR--KVFDEM----ADSNEVTW 143
I V +G+ SLID G C + R +F+E N + +
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLID--GLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 144 CSLLFAYANSSLFGMALEVFRSMPERVEI----AWNTMIAGHARRGEVEACLGLFKEMCE 199
+L+ +N + A ++ M E+ I +N ++ G + G V GL K M
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 200 SLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSD 259
Y PD +TF+ L++ + M + ++ +G + NS+L+ K D
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 260 AMEMFNSF----GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIV 311
ME + + A N ++N ++++ + +A ++ +K++ V++ ++I
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 312 GYTRNGNGELALSMFLDMTR-----NSIQLDNLVAGAVLHAC-ASLAILAHGKMVHSCII 365
G+ +NG+ + A ++F M +S N++ A ++A +MV C+
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL- 633
Query: 366 RRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE-------KDLVSWNSMLFAFGLHG 418
G D Y + +V+ + K G++ L + +LE L + ++ +
Sbjct: 634 --GPDGYTY--RLMVDGFCKTGNVN---LGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Query: 419 RANEAMCLFREMVASGVKPDEV 440
R EA + MV G+ P+ V
Sbjct: 687 RVYEAAGIIHRMVQKGLVPEAV 708
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 182/447 (40%), Gaps = 79/447 (17%)
Query: 121 KCLK-PHDARKVFDEMADSNEV-------TWCSLLFAYANSSLFGMALEVFRSMPERV-- 170
KC K P A ++F+ M EV T+ S++ F EV M E V
Sbjct: 15 KCQKDPMKALEMFNSM--RKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGN 72
Query: 171 ---EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTES-------- 219
E + + + R+G+V+ + +F+ M +P ++++A+M+ +S
Sbjct: 73 HMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHK 132
Query: 220 -----RDMLYGCMVHGFVIK-------SGWSSAMEVKNSILS----------------FY 251
RD V+ F I+ S +A+ + N++ S FY
Sbjct: 133 VYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 252 AKLECPSDAMEMFNSFGA----FNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NI 303
+ ++ E+F A ++N ++ K GD ++ + + N+
Sbjct: 193 EE-NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 304 VSWTSMIVGYTRNGNGELALSMFLDMTR-----NSIQLDNLVAGAVLHACASLAILAHGK 358
++ I G + G + A+ M + + I +NL+ G ++ A + GK
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 359 MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLE------GSALAFCGILEKDLVSWNSMLF 412
MV+ GL+ + N+L+ Y K G ++ G A+ F G + D ++ S++
Sbjct: 312 MVNE-----GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV-FNGFV-PDQFTYRSLID 364
Query: 413 AFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLS 472
G N A+ LF E + G+KP+ + + ++ S+ G+I E M SE GL
Sbjct: 365 GLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM-SEKGLI 423
Query: 473 HGMDHVACMVDMLGRGGYVAEAQSLAK 499
+ +V+ L + G V++A L K
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVK 450
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/525 (21%), Positives = 206/525 (39%), Gaps = 89/525 (16%)
Query: 56 QQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSL 115
++ LFG M S P +S LSA A + + + G +L N L
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 116 IDMYGKCLKPHDARKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMPE--- 168
I+ + +C + A + +M + + VT SLL + + + A+ + M E
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 169 -RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCM 227
+ + T+I G + + L M + QPD T YG +
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT---------------YGAV 224
Query: 228 VHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGD 287
V+G + A+ + N + + AK+E N V ++ +ID+ K
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEA--AKIEA--------------NVVIYSTVIDSLCKYRH 268
Query: 288 TQKAFLAFQQAPDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGA 343
A F + +K N+++++S+I G A + DM I + + A
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 344 VLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD 403
++ A L + ++ +I+R +D +F +SL+N + L + ++ KD
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 404 ----LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGF 459
+V++N+++ F R ++ M LFREM G+ + VT+T ++
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI------------H 436
Query: 460 AFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN--SYEVLLG 517
FF++ + AQ + K+ + G N +Y +LL
Sbjct: 437 GFFQARDCD------------------------NAQMVFKQMV-SVGVHPNILTYNILLD 471
Query: 518 ACHAHGDLGTGSSVGEYLK--TLEPEKEVGYVMLSNLYCASGQWK 560
+G L V EYL+ T+EP+ +M+ + C +G+WK
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM-CKAGKWK 515
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/462 (20%), Positives = 185/462 (40%), Gaps = 51/462 (11%)
Query: 27 ARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALS 82
A LF EM P V + ++T + + + + L+ M D +S++ +
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 83 ACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD----S 138
S + ++ G+R S+ SL++ + + + +A + D M
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLF 194
N V + +++ + ALEVF M ++ + +NT+I+G + G L
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 195 KEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKL 254
++M + P+ F+AL++ + ++L ++ +I+ + NS+++ +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 255 ECPSDAMEMFN---SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIV 311
C DA MF+ S G F PD +V++ ++I
Sbjct: 303 GCLGDAKYMFDLMVSKGCF----------------------------PD--VVTYNTLIT 332
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
G+ ++ E + +F +MT + D ++H L + V + ++ G+
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 392
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEK-----DLVSWNSMLFAFGLHGRANEAMCL 426
+ N L++ G +E AL L+K D++++N ++ + EA CL
Sbjct: 393 DIVTYNILLDCLCNNGKIE-KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCL 451
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
FR + GVKPD + + M+ GL E R M +
Sbjct: 452 FRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/465 (20%), Positives = 200/465 (43%), Gaps = 29/465 (6%)
Query: 123 LKPHDARKVFDEMADSNEVT----WCSLLFAYANSSLFGMALEVFRSMPERVEIA----- 173
+K DA +F M S + + LL A A F + + + M +R+ I+
Sbjct: 64 MKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM-QRLGISHNLYT 122
Query: 174 WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVI 233
+N +I RR ++ L L +M + Y+P T S+L+N + + + ++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 234 KSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQ 289
+ G+ +++ S+A+ + + N V++ +++ K GD
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 290 KAFLAFQQAP----DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVL 345
AF + + N+V ++++I + + + AL++F +M ++ + + +++
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 346 HACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK--- 402
+ + + S +I R ++ + N+L++ + K G L + + ++++
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 403 -DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAF 461
D+ +++S++ F +H R +EA +F M++ P+ VT+ ++ IDEG
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 462 FRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTN--SYEVLLGAC 519
FR MS GL ++ + AQ + K+ + G N +Y LL
Sbjct: 423 FREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGL 480
Query: 520 HAHGDLGTGSSVGEYLK--TLEPEKEVGYVMLSNLYCASGQWKEA 562
+G L V EYL+ +EP +M+ + C +G+ ++
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM-CKAGKVEDG 524
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 119/541 (21%), Positives = 226/541 (41%), Gaps = 60/541 (11%)
Query: 56 QQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSL 115
++ LFG M S P F ++ LSA A + + G +L N L
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNIL 126
Query: 116 IDMYGKCLKPHDARKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMPE--- 168
I+ + + + A + +M + + VT SLL Y + A+ + M E
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 169 RVE-IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCM 227
R + I + T+I G + + L M + QP+ T YG +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT---------------YGVV 231
Query: 228 VHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGD 287
V+G + A + N + + AK+E N V ++ +ID+ K
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEA--AKIEA--------------NVVIYSTVIDSLCKYRH 275
Query: 288 TQKAFLAFQQAPDK----NIVSWTSMI---VGYTRNGNGELALSMFLDMTRNSIQLDNLV 340
A F + +K N+++++S+I Y R + LS DM I + +
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS---DMIERKINPNVVT 332
Query: 341 AGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGIL 400
A++ A L + ++ +I+R +D +F +SL+N + L+ + F ++
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 401 EKD----LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLID 456
KD +V++N+++ F R +E + LFREM G+ + VT+T ++ D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 457 EGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGART-NSYEVL 515
F+ M S+ G+ + ++D L + G + +A + + ++ T +Y ++
Sbjct: 453 NAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 516 L-GACHAHGDLGTGSSV--GEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQ 572
+ G C A G + G + LK ++P+ + M+S +C G +EA+ + ++M +
Sbjct: 512 IEGMCKA-GKVEDGWDLFCSLSLKGVKPDVIIYNTMISG-FCRKGLKEEADALFRKMRED 569
Query: 573 G 573
G
Sbjct: 570 G 570
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/441 (19%), Positives = 180/441 (40%), Gaps = 55/441 (12%)
Query: 23 RICHARKLFDEMPD----RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
RI A L D+M + D++ + +I ++++L M +P+ +Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 79 AALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD 137
++ C G ++++ + + +++ + +++ID K DA +F EM +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEA-AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 138 S----NEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNTMIAGHARRGEVEA 189
N +T+ SL+ N + A + M ER + +N +I + G++
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE 348
Query: 190 CLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILS 249
L+ EM + PD +T+S+L+N GF +
Sbjct: 349 AEKLYDEMIKRSIDPDIFTYSSLIN---------------GFCM---------------- 377
Query: 250 FYAKLECPSDAMEMFNSFGAF-NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIV 304
+ +L+ E+ S F N V++N +I+ K + F++ + N V
Sbjct: 378 -HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 305 SWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCI 364
++T++I G+ + + + A +F M + + + + +L L +V +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 365 IRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRA 420
R ++ ++ N ++ K G +E FC + ++ D++ +N+M+ F G
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 421 NEAMCLFREMVASGVKPDEVT 441
EA LFR+M G PD T
Sbjct: 557 EEADALFRKMREDGPLPDSGT 577
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/482 (17%), Positives = 195/482 (40%), Gaps = 55/482 (11%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+N +++A + + + +SL M+ + ++Y+ ++ S + ++
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD----SNEVTWCSLLFAYANSSLFG 157
GY S+ +SL++ Y + DA + D+M + + +T+ +L+ +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 158 MALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM 213
A+ + M +R + + ++ G +RG+++ L +M + + + +S ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 214 NACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF--- 270
++ + R + + G + +S++S E SDA + +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 271 -NQVSWNAIIDAHMKLGDTQKAFLAFQQA------PD----------------------- 300
N V++NA+IDA +K G +A + + PD
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 301 ----------KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACAS 350
N+V++ ++I G+ + + + +F +M++ + + + ++H
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVS 406
+ +MV ++ G+ + N+L++ K G LE + + F + +E + +
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS 466
+N M+ G+ + LF + GVKPD + + M+ GL +E A FR M
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 467 SE 468
+
Sbjct: 568 ED 569
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/559 (20%), Positives = 225/559 (40%), Gaps = 64/559 (11%)
Query: 41 AWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAAL-SACAGGSHHGFGSVIHAL 99
++ +I Y G+ Q SL +F M + P ++ +A L S G S + +
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 100 VVVSGYRSSLP---VANSLIDMYGKCLKPHDARKVFDEMADSNE----VTWCSLLFAYAN 152
+ R P N LI++ + + +M S VT+ ++L Y
Sbjct: 225 L----KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 153 SSLFGMALEVFRSMPERVEIA----WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
F A+E+ M + A +N +I R + L ++M + + P++ T
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
++ L+N GF + A ++ N +LSF
Sbjct: 341 YNTLIN---------------GFSNEGKVLIASQLLNEMLSFGL---------------- 369
Query: 269 AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVGYTRNGNGELALS 324
+ N V++NA+ID H+ G+ ++A F K + VS+ ++ G +N +LA
Sbjct: 370 SPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG 429
Query: 325 MFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYA 384
++ M RN + + + ++ L ++ + + + G+D + ++L+N +
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 385 KCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEV 440
K G + + C I L + + ++++++ G EA+ ++ M+ G D
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 441 TFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK 500
TF ++ + G + E F R M+S+ G+ C+++ G G +A S+ +
Sbjct: 550 TFNVLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 501 YSKTSGART-NSYEVLLGACHAHGDLGTGSSVGEYLKTLEP-EKEVGYVMLSNLY---CA 555
+K T +Y LL G L ++LK+L V VM + L C
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAE---KFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 556 SGQWKEAEIVRKEMLDQGV 574
SG +A + EM+ + +
Sbjct: 666 SGNLAKAVSLFGEMVQRSI 684
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 118/545 (21%), Positives = 221/545 (40%), Gaps = 64/545 (11%)
Query: 72 PDSFSYSAALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
PD +++ ++ CA GS S + + SGY ++ N+++ Y K + A +
Sbjct: 231 PDVATFNILINVLCAEGSFEK-SSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289
Query: 131 VFDEM----ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNTMIAGHA 182
+ D M D++ T+ L+ S+ + R M +R+ E+ +NT+I G +
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNA------CTESRDMLYGCMVHGF----- 231
G+V L EM P+ TF+AL++ E+ M Y G
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 232 ---VIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDT 288
V+ G E + FY M M + ++++ +ID K G
Sbjct: 410 SYGVLLDGLCKNAEF-DLARGFY---------MRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 289 QKAFLAFQQAP----DKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAV 344
+A + + D +IV+++++I G+ + G + A + + R + + ++ +
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 345 LHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDL-EGSALAFC----GI 399
++ C + L ++ +I G + F N LV K G + E C GI
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 579
Query: 400 LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGF 459
L + VS++ ++ +G G +A +F EM G P T+ +L G + E
Sbjct: 580 LP-NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 460 AFFRSMSSEFGLSHGMDHVA--CMVDMLGRGGYVAEAQSL-AKKYSKTSGARTNSYEVLL 516
F +S+ + + +D V ++ + + G +A+A SL + ++ + +Y L+
Sbjct: 639 KFLKSLHA---VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 695
Query: 517 -GACHAHGDLGTGSSVGEYLKTLEPE-------KEVGYVMLSNLYCASGQWKEAEIVRKE 568
G C G +V L E E +V Y + +GQWK R++
Sbjct: 696 SGLCRK------GKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQ 749
Query: 569 MLDQG 573
M + G
Sbjct: 750 MDNLG 754
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 101/523 (19%), Positives = 210/523 (40%), Gaps = 49/523 (9%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
+ + ++ +I +G ++++ ++ +M + D F+++ +++
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 98 ALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE----VTWCSLLFAYANS 153
+ G + + LI+ YG + A VFDEM T+ SLL
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 154 SLFGMALEVFRSM---PERVE-IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTF 209
A + +S+ P V+ + +NT++ + G + + LF EM + PD +T+
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 210 SALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAM-------- 261
++L++ C VI ++ E + ++L C D M
Sbjct: 692 TSLISGL---------CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKA 742
Query: 262 -----EMFNSFG-AFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIV 311
E ++ G + V+ NA+ID + ++G +K + ++ N+ ++ ++
Sbjct: 743 GIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 802
Query: 312 GYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRG--L 369
GY++ + + ++ + N I D L +++ +L G + I RG +
Sbjct: 803 GYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV 862
Query: 370 DKYLFVGNSLVNMYAKCGDLEGS-----ALAFCGI-LEKDLVSWNSMLFAFGLHGRANEA 423
D+Y F N L++ G++ + + GI L+KD + ++M+ + R E+
Sbjct: 863 DRYTF--NMLISKCCANGEINWAFDLVKVMTSLGISLDKD--TCDAMVSVLNRNHRFQES 918
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVD 483
+ EM G+ P+ + G++ +G I F M + + A MV
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA-MVR 977
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGART-NSYEVLLGACHAHGDL 525
L + G EA L + K T S+ L+ C +G++
Sbjct: 978 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNV 1020
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 127/666 (19%), Positives = 252/666 (37%), Gaps = 110/666 (16%)
Query: 15 IVSLARSGRICHARKLFDEMPD----RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNS 70
I + G++ A +L +EM + V +NA+I + G ++++L +F M
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 71 KPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
P SY L + + + +G +ID K +A
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 131 VFDEMA----DSNEVTWCSLLFAYANSSLFGMALE----VFRSMPERVEIAWNTMIAGHA 182
+ +EM+ D + VT+ +L+ + F A E ++R I ++T+I
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 524
Query: 183 RRGEVEACLGLFKEMCESLYQPDQWTFSALMNA---------------CTESRDML---- 223
R G ++ + +++ M + D +TF+ L+ + C S +L
Sbjct: 525 RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTV 584
Query: 224 -YGCMVHGF---------------VIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSF 267
+ C+++G+ + K G S+L K +A + S
Sbjct: 585 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 268 ----GAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIV----SWTSMIVGYTRNGNG 319
A + V +N ++ A K G+ KA F + ++I+ ++TS+I G R G
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704
Query: 320 ELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKY-----LF 374
+A+ +F + + N++ V++ C + G+ R +D +
Sbjct: 705 VIAI-LF---AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Query: 375 VGNSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREM 430
N++++ Y++ G +E + + + +L ++N +L + + + L+R +
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820
Query: 431 VASGVKPDEV-----------------------------------TFTGMLMTCSHLGLI 455
+ +G+ PD++ TF ++ C G I
Sbjct: 821 ILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEI 880
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTS-GARTNSYEV 514
+ F + M+S G+S D MV +L R E++ + + SK + Y
Sbjct: 881 NWAFDLVKVMTS-LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 515 LLGACHAHGDLGTGSSVGEYL--KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQ 572
L+ GD+ T V E + + P M+ L G+ EA ++ + ML
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL-AKCGKADEATLLLRFMLK- 997
Query: 573 GVKKVP 578
+K VP
Sbjct: 998 -MKLVP 1002
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 108/533 (20%), Positives = 197/533 (36%), Gaps = 68/533 (12%)
Query: 97 HALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLLFAYANSSLF 156
H LV Y + + L M GK A + +SN + L+ Y +
Sbjct: 120 HILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMI 179
Query: 157 GMALEVFRSMP----ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSAL 212
+LE+FR M N ++ + GE + KEM + PD TF+ L
Sbjct: 180 QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 239
Query: 213 MNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF-- 270
+N + + KSG++ + N++L +Y K A+E+ + +
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 271 -------------------------------------NQVSWNAIIDAHMKLGDTQKA-- 291
N+V++N +I+ G A
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 292 ----FLAFQQAPDKNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHA 347
L+F +P N V++ ++I G+ GN + AL MF M + + G +L
Sbjct: 360 LLNEMLSFGLSP--NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 348 CASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKD 403
A + + + R G+ +++ K G L+ + + + ++ D
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 404 LVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFR 463
+V++++++ F GR A + + G+ P+ + ++ ++ C +G + E +
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 464 SMSSEFGLSHGMDHVA--CMVDMLGRGGYVAEAQSLAK-KYSKTSGARTNSYEVLLGACH 520
+M E H DH +V L + G VAEA+ + S T S++ L+ +
Sbjct: 538 AMILE---GHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI---N 591
Query: 521 AHGDLGTG----SSVGEYLKTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEM 569
+G+ G G S E K Y L C G +EAE K +
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 22/327 (6%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D VA+N+MI Y L++++ L M + P++ SYS LS +H F +
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV--ENHKF---LE 313
Query: 98 ALVVVSGYRS-----SLPVANSLIDMYGKCLKPHDARKVFDEMA----DSNEVTWCSLLF 148
AL V + + L N +ID+YG+ +A ++F + + N V++ ++L
Sbjct: 314 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Query: 149 AYANSSLFGMALEVFRSMP----ERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQP 204
Y + LFG A+ +FR M E+ + +NTMI + + E E L +EM +P
Sbjct: 374 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
+ T+S +++ ++ + + + SG + +++ Y ++ A +
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 265 NSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPD----KNIVSWTSMIVGYTRNGNGE 320
+ + + I K G T++A F+QA + K+I + MI Y+RN
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYV 553
Query: 321 LALSMFLDMTRNSIQLDNLVAGAVLHA 347
+ +F M D+ V VL+A
Sbjct: 554 NVIEVFEKMRTAGYFPDSNVIAMVLNA 580
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/472 (20%), Positives = 195/472 (41%), Gaps = 61/472 (12%)
Query: 19 ARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDS 74
A+ I H LFDEM R D ++ +IT++ G++ +LS M D
Sbjct: 168 AKQFDIAHG--LFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDL 225
Query: 75 FSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDE 134
YS + + I + + SG L NS+I++YGK +AR + E
Sbjct: 226 VLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKE 285
Query: 135 MADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAW-----NTMIAGHARRG 185
M ++ N V++ +LL Y + F AL VF M E V A N MI + +
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE-VNCALDLTTCNIMIDVYGQLD 344
Query: 186 EVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKN 245
V+ LF + + +P+ +++ ++ E+ L+G +H F + M+ K+
Sbjct: 345 MVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE--LFGEAIHLFRL-------MQRKD 395
Query: 246 SILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK---- 301
+E N V++N +I + K + +KA Q+ +
Sbjct: 396 ---------------IEQ-------NVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 302 NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGK-MV 360
N ++++++I + + G + A ++F + + +++D ++ ++ A + ++ H K ++
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 361 HSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE----KDLVSWNSMLFAFGL 416
H + + + + + + AK G E + F E KD+ + M+ +
Sbjct: 494 HELKLPDNIPR-----ETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSR 548
Query: 417 HGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
+ R + +F +M +G PD +L ++ +R M E
Sbjct: 549 NQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEE 600
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/317 (18%), Positives = 146/317 (46%), Gaps = 32/317 (10%)
Query: 173 AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFV 232
A+N ++ R + + GLF EM + PD++T+S L+ + ++ ++ +
Sbjct: 157 AYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF--GKEGMFDSAL---- 210
Query: 233 IKSGWSSAME---------VKNSILSFYAKLECPSDAMEMFNSFG----AFNQVSWNAII 279
W ME + ++++ +L S A+ +F+ + V++N++I
Sbjct: 211 ---SWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 280 DAHMKLGDTQKAFLAFQQAPD----KNIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
+ + K ++A L ++ + N VS+++++ Y N ALS+F +M +
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
LD ++ L ++ + + + ++ + N+++ +Y + +L G A+
Sbjct: 328 LDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGE-AELFGEAIH 386
Query: 396 FCGI-----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCS 450
+ +E+++V++N+M+ +G +A L +EM + G++P+ +T++ ++
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 451 HLGLIDEGFAFFRSMSS 467
G +D F+ + S
Sbjct: 447 KAGKLDRAATLFQKLRS 463
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/441 (19%), Positives = 187/441 (42%), Gaps = 44/441 (9%)
Query: 21 SGRICHARKLFDEMPD----RDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFS 76
S RI A L D+M + D+ + +I ++++L M +PD +
Sbjct: 166 SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Query: 77 YSAALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM 135
Y ++ C G ++++ + + ++++ + N++ID K A +F EM
Sbjct: 226 YGTVVNGLCKRGDIDLALNLLNKMEA-ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 136 ADS----NEVTWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNTMIAGHARRGEV 187
N VT+ SL+ N + A + +M E+ + +N +I + G++
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 188 EACLGLFKEMCESLYQPDQWTFSALMNA-CTESRDMLYGCMVHGFVIKSGWSSAMEVKNS 246
L +EM + PD T++ L+N C +R + + F++ ++ N+
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNR-LDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 247 ILSFYAKLECPSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSW 306
+++ + K + D +E+F +Q+ + N V++
Sbjct: 404 LINGFCKCKRVEDGVELFREM--------------------SQRGLVG-------NTVTY 436
Query: 307 TSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIR 366
T++I G+ + G+ + A +F M N + D + +LH S L ++ + +
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 367 RGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI-LEKDLVSWNSMLFAFGLHGRANEAMC 425
++ +F+ N+++ K G + + FC + ++ D+V++N+M+ EA
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 426 LFREMVASGVKPDEVTFTGML 446
LFR+M G P+ T+ ++
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLI 577
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 92/492 (18%), Positives = 203/492 (41%), Gaps = 46/492 (9%)
Query: 23 RICHARKLFDEM----PDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYS 78
++ A LF +M P V +N +++A + + ++ +SL M+ D ++YS
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 79 AALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMADS 138
++ S + A ++ GY + +SL++ Y + DA + D+M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE- 181
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMC 198
G + F + T+I G + + L +M
Sbjct: 182 -----------------MGYKPDTF---------TFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 199 ESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
+ QPD T+ ++N + D+ + + + + + + N+I+ K
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 259 DAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQKA--FLA--FQQAPDKNIVSWTSMI 310
A+++F N V++N++I+ G A L+ ++ + N+V++ ++I
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 311 VGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLD 370
+ + G A + +M + SI D + +++ L K + ++ +
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 371 KYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDL----VSWNSMLFAFGLHGRANEAMCL 426
+ N+L+N + KC +E F + ++ L V++ +++ F G + A +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMS-SEFGLSHGMDHVACMVDML 485
F++MV++ V D +T++ +L G +D F+ + SE L+ + + M++ +
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT--MIEGM 513
Query: 486 GRGGYVAEAQSL 497
+ G V EA L
Sbjct: 514 CKAGKVGEAWDL 525
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 190/466 (40%), Gaps = 28/466 (6%)
Query: 142 TWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLGLFK 195
T+ + + S +AL V M P+ V ++ +++ G+ + + L
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS--SLLNGYCHSKRISDAVALVD 177
Query: 196 EMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLE 255
+M E Y+PD +TF+ L++ + +++ G + ++++ K
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 256 CPSDAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWT 307
A+ + N A N V +N IID+ K + A F + K N+V++
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 308 SMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRR 367
S+I G A + +M I + + A++ A L + +H +I+R
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 368 GLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKD----LVSWNSMLFAFGLHGRANEA 423
+D N L+N + L+ + F ++ KD + ++N+++ F R +
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 424 MCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVD 483
+ LFREM G+ + VT+T ++ G D F+ M S + M + +
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 484 MLGRGGYVAEAQSLAKKYSKTSGARTNSY---EVLLGACHAHGDLGTGSSVGEYLKTLEP 540
+ G + + KY + S N + ++ G C A G +G + L +++P
Sbjct: 478 LCSYGKL--DTALVIFKYLQKSEMELNIFIYNTMIEGMCKA-GKVGEAWDLFCSL-SIKP 533
Query: 541 EKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSSWIEIR 586
+ M+S L C+ +EA+ + ++M + G G+ IR
Sbjct: 534 DVVTYNTMISGL-CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 177/428 (41%), Gaps = 74/428 (17%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIH 97
D ++N +I + +LS+ G M +PD + S+ ++ G+ V
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNR-----VFD 157
Query: 98 ALVVVS-----GYRSSLPVANSLIDMYGKCLKPHDARKVFDEM----ADSNEVTWCSLLF 148
A+ +VS G+R + + N++ID K +DA ++FD M ++ VT+ SL+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 149 AYANSSLFGMALEVFRSMPERV----EIAWNTMIAGHARRGEVEACLGLFKEMCESLYQP 204
S + A + R M R I + +I + G+ + L++EM P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 205 DQWTFSALMNA------CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPS 258
D +T+++L+N E++ ML ++ G + N++++ + K +
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQML------DLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 259 DAMEMFNSFGAF----NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK-NIVSWTSMIVGY 313
+ ++F + +++N II + + G A F + + NI +++ ++ G
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 314 TRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYL 373
N E AL +F +M ++ I+LD V+H
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHG-------------------------- 425
Query: 374 FVGNSLVNMYAKCGDLEGSALAF----CGILEKDLVSWNSMLFAFGLHGRANEAMCLFRE 429
K G++E + F C L+ D+VS+ +M+ F + +++ L+R+
Sbjct: 426 ---------MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRK 476
Query: 430 MVASGVKP 437
M G+ P
Sbjct: 477 MQEDGLLP 484
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/456 (17%), Positives = 169/456 (37%), Gaps = 82/456 (17%)
Query: 164 RSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDML 223
R +P V+ ++ +++ A+ + + LF M D ++++ ++N +
Sbjct: 64 RPLPSIVD--FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFV 121
Query: 224 YGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----NQVSWNAII 279
V G ++K G+ + +S+++ + + DA+++ + + V +N II
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 280 DAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVGYTRNGNGELALSMFLDMTRNSIQ 335
D K+G A F + + V++ S++ G +G A + DM I
Sbjct: 182 DGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 241
Query: 336 LDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALA 395
+ + AV+ + ++ + RR +D
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP------------------------ 277
Query: 396 FCGILEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLI 455
D+ ++NS++ +HGR +EA + MV G PD VT+ ++ +
Sbjct: 278 -------DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 456 DEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSYEVL 515
DEG FR M+ GL ++ + G AQ + + RT Y +L
Sbjct: 331 DEGTKLFREMAQR-GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRT--YSIL 387
Query: 516 L-GAC-------------------------------HAHGDLGTGSSVGEYLKT-----L 538
L G C H +G + ++ L
Sbjct: 388 LYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL 447
Query: 539 EPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGV 574
+P+ V Y + + +C QW +++++ ++M + G+
Sbjct: 448 KPDV-VSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 18/240 (7%)
Query: 1 MHSMRSYLFQTTSKIVSLARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQ 56
M + + T+ I + G+ A KL++EM D D +N++I G
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 57 QSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLI 116
++ + M PD +Y+ ++ G+ + + G N++I
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 117 DMYGKCLKPHDARKVFDEM-ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVEI--- 172
Y + +P A+++F M + N T+ LL+ + AL +F +M ++ EI
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENM-QKSEIELD 415
Query: 173 --AWNTMIAGHARRGEVEACLGLFKEM-CESLYQPDQWTFSALMNACTESR-----DMLY 224
+N +I G + G VE LF+ + C+ L +PD +++ +++ R D+LY
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGL-KPDVVSYTTMISGFCRKRQWDKSDLLY 474
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 188/442 (42%), Gaps = 34/442 (7%)
Query: 38 DSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSA-CAGGSHHGFGSVI 96
D++ ++ ++ + G ++++L M +PD + S ++ C G V
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR------VS 192
Query: 97 HALVVVS-----GYRSSL----PVANSLIDMYGKCLKPHDARKVFDEMADSNEVTWCSLL 147
ALV++ G++ PV N L L RK+ + ++ V + ++
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 148 FAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQ 203
+ F AL +F M + + ++++I G G+ + + +EM
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 204 PDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEM 263
PD TFSAL++ + +L ++ +I G + NS++ + K C +A +M
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 264 FNSFGAF----NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----NIVSWTSMIVGYTR 315
F+ + + V+++ +I+++ K F++ K N +++ ++++G+ +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 316 NGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFV 375
+G A +F +M + + G +L L + + + + + +
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 376 GNSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMV 431
N +++ ++ + FC + +K D+V++N M+ G +EA LFR+M
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 432 ASGVKPDEVTFTGMLMTCSHLG 453
G PD+ T+ ++ +HLG
Sbjct: 553 EDGCTPDDFTYN--ILIRAHLG 572
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 194/439 (44%), Gaps = 46/439 (10%)
Query: 146 LLFAYANSSLFGMALEVFRSMPERVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPD 205
LLFA+ S+ G A ++ E I ++T++ G G V + L M E +PD
Sbjct: 121 LLFAF---SVLGRA---WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD 174
Query: 206 QWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
T S L+N G +K S A+ + + ++ + + P
Sbjct: 175 LVTVSTLIN---------------GLCLKGRVSEALVLIDRMVEYGFQ---P-------- 208
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNI----VSWTSMIVGYTRNGNGEL 321
++V++ +++ K G++ A F++ ++NI V ++ +I ++G+ +
Sbjct: 209 -----DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 322 ALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVN 381
ALS+F +M I+ D + +++ + G + +I R + + ++L++
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 382 MYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
++ K G L + + ++ + D +++NS++ F +EA +F MV+ G +P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSL 497
D VT++ ++ + +D+G FR +SS+ + + + + ++ G A +
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 498 AKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG-YVMLSNLYCAS 556
+ S+ +Y +LL +G+L + E ++ +G Y ++ + C +
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 557 GQWKEAEIVRKEMLDQGVK 575
+ +A + + D+GVK
Sbjct: 504 SKVDDAWSLFCSLSDKGVK 522
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 195/462 (42%), Gaps = 38/462 (8%)
Query: 36 DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSA-CAGGSHHGFGS 94
+ D MI Y + S+ G +PD+ ++S ++ C G +
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVA 161
Query: 95 VIHALVVVSGYRSSLPVANSLIDMYGKCLKPH--DARKVFDEMAD----SNEVTWCSLLF 148
++ +V + R L ++LI+ G CLK +A + D M + +EVT+ +L
Sbjct: 162 LVDRMVEMK-QRPDLVTVSTLIN--GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 149 AYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQP 204
S +AL++FR M ER + ++ +I + G + L LF EM +
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 205 DQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMF 264
D T+S+L+ G + +I + ++++ + K +A E++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 265 NSFG----AFNQVSWNAIIDAHMK---LGDTQKAF-LAFQQAPDKNIVSWTSMIVGYTRN 316
N A + +++N++ID K L + + F L + + +IV+++ +I Y +
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 317 GNGELALSMFLDMTR-----NSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDK 371
+ + +F +++ N+I + LV G C S + A ++ ++ RG+
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGF----CQSGKLNAAKELFQE-MVSRGVPP 453
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVSWNSMLFAFGLHG-----RANEAMCL 426
+ L++ G+L AL ++K ++ ++ +HG + ++A L
Sbjct: 454 SVVTYGILLDGLCDNGEL-NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSL 512
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSE 468
F + GVKPD VT+ M+ G + E FR M +
Sbjct: 513 FCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 133/333 (39%), Gaps = 55/333 (16%)
Query: 18 LARSGRICHARKLFDEMPDRD----SVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
L +SG A LF +M +R+ V ++ +I + G + +LSLF M + K D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 74 SFSYSAALSA-CAGGSHHG-------------------FGSVIHALV------------- 100
+YS+ + C G F ++I V
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 101 --VVSGYRSSLPVANSLIDMYGK--CLKPHDARKVFDEMA----DSNEVTWCSLLFAYAN 152
+ G NSLID + K CL H+A ++FD M + + VT+ L+ +Y
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCL--HEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 153 SSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWT 208
+ + +FR + + I +NT++ G + G++ A LF+EM P T
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 209 FSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG 268
+ L++ ++ ++ + + KS + + + N I+ DA +F S
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLS 517
Query: 269 ----AFNQVSWNAIIDAHMKLGDTQKAFLAFQQ 297
+ V++N +I K G +A + F++
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/444 (19%), Positives = 174/444 (39%), Gaps = 34/444 (7%)
Query: 23 RICHARKLFDEMPDRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALS 82
R+ H+R P + + +++ + + Y +SLF M+I P + + +
Sbjct: 73 RMVHSR------PLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 83 ACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMA----DS 138
S S ++ G+ L SL++ Y + DA +FD++
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 139 NEVTWCSLLFAYANSSLFGMALEVFRSM------PERVEIAWNTMIAGHARRGEVEACLG 192
N VT+ +L+ + A+E+F M P V +N ++ G G
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV--TYNALVTGLCEIGRWGDAAW 244
Query: 193 LFKEMCESLYQPDQWTFSALMNACTESRDM-----LYGCMVHGFVIKSGWSSAMEVKNSI 247
L ++M + +P+ TF+AL++A + + LY M+ V ++ +
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING-- 302
Query: 248 LSFYAKLECPSDAMEMFNSFGAF-NQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK----N 302
L Y L+ + G + N+V + +I K + F + K N
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVAN 362
Query: 303 IVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHS 362
+++T +I GY G ++A +F M+ D +L + M+
Sbjct: 363 TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 363 CIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEK----DLVSWNSMLFAFGLHG 418
+ +R +D + ++ K G +E + FC + K +++++ +M+ F G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 419 RANEAMCLFREMVASGVKPDEVTF 442
+EA LF++M G P+E +
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 119/591 (20%), Positives = 238/591 (40%), Gaps = 66/591 (11%)
Query: 42 WNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHALVV 101
+ I A L + L LF M+ P F Y+ + G + ++
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 102 VSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEM-ADSNE---VTWCSLLFAYANSSLFG 157
SL N+LID Y K P + KV + M AD E +T+ +LL + +
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 158 MALEVFRSMPE----RVEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALM 213
A V + M + ++ + G++ + EA LG+++ +S + + +T S L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 214 NA-CTESR-------------------DMLYGCMVHGFVIKSGWS------SAME---VK 244
NA C E + +++Y M+ G+ K AME +K
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 245 NSILSFYAKLECPSDAMEMFNSFGAFNQV----------SWNAIIDAHMKLGDTQKAFLA 294
L++ + + EM N+ N++ ++N +I + + + K F
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 295 FQQAPDK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACAS 350
++ D N+VS+ ++I + A + DM + + ++ C S
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 351 LAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGI----LEKDLVS 406
+ ++++G++ L N+L++ + G L + I L+ D+ +
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 407 WNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGL-IDEGFAFFRSM 465
+NS++ +G G + L+ EM SG+KP T+ ++ C+ G+ + E S+
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSL 661
Query: 466 SSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK-YSKTSGARTNSYEVLLGACHAHGD 524
+ + +G+ H + G + +A +L K+ K+ G +Y L+ G
Sbjct: 662 KPDLLVYNGVLHCYAV------HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 525 LGTGSSVGEYL--KTLEPEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQG 573
L S+ + + + +EPE + Y ++ +C + A + +EM ++G
Sbjct: 716 LCEVRSLIDEMNAREMEPEADT-YNIIVKGHCEVKDYMSAYVWYREMQEKG 765
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 129/619 (20%), Positives = 244/619 (39%), Gaps = 86/619 (13%)
Query: 5 RSYLFQTTSKIVSLARSGRICHARKLFDEMPDR----DSVAWNAMITAYSHLGLYQQSLS 60
++Y F I +L S + AR+LFDEMP++ + + ++ Y GL + L
Sbjct: 146 QTYTFNLL--IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLE 203
Query: 61 LFGSMRISNSKPDSFSYSAALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMY 119
L +M P+ Y+ +S+ C G + ++ + G + NS I
Sbjct: 204 LLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM-REEGLVPDIVTFNSRISAL 262
Query: 120 GKCLKPHDARKVFDEM--------ADSNEVTWCSLLFAYANSSLFGMALEVFRSMPERVE 171
K K DA ++F +M N +T+ +L + L A +F S+ E +
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 172 IA----WNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMN------------- 214
+A +N + G R G+ + K+M + P ++++ LM+
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 215 ---------ACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFN 265
C ++ + YGC++HG+ +A S+L EM
Sbjct: 383 IVGLMKRNGVCPDA--VTYGCLLHGYCSVGKVDAA----KSLLQ------------EMMR 424
Query: 266 SFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDK--NIVSWTSMIVGYTRNGNGELAL 323
+ N + N ++ + K+G +A ++ +K + + T I+ G+GEL
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHG--KMVHSCIIRRGLDKYLFVGNSLVN 381
++ +V G +H A+L L + +V +I L ++L+N
Sbjct: 485 AI------------EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 382 MYAKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKP 437
K G + F + L+ D V++N + F G+ + A + ++M G
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 438 DEVTFTGMLMTCSHLGLIDEGFAFFRSMS--SEFGLSHGMDHVACMVDMLGRGGYVAEAQ 495
T+ +++ LG+ ++ F M E G+S + + L G V +A
Sbjct: 593 SLETYNSLILG---LGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDAT 649
Query: 496 SLAKK-YSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSNLYC 554
+L + K S++ L+ A D V E ++ +KE Y ++ N
Sbjct: 650 NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL 709
Query: 555 ASGQWKEAEIVRKEMLDQG 573
A+GQ +A + + +LD+G
Sbjct: 710 AAGQLLKATELLEAVLDRG 728
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 189/463 (40%), Gaps = 76/463 (16%)
Query: 142 TWCSLLFAYANSSLFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEM 197
T+ L+ A +SS A E+F MPE+ E + ++ G+ + G + L L M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 198 CESLYQPDQWTFSALMNA-CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLEC 256
P++ ++ ++++ C E R+ MV + G + NS +S K
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR-EEGLVPDIVTFNSRISALCKEGK 267
Query: 257 PSDAMEMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAPDKNIVSWTSMIVGYTRN 316
DA +F+ +D ++ L P N +++ M+ G+ +
Sbjct: 268 VLDASRIFSDME----------LDEYLGL-------------PRPNSITYNLMLKGFCKV 304
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII-----RRGLDK 371
G E A ++F SI+ ++ +A + ++ HGK + + + +G+
Sbjct: 305 GLLEDAKTLF-----ESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 372 YLFVGNSLVNMYAKCGDLEGSALAFCGILEK-----DLVSWNSMLFAFGLHGRANEAMCL 426
++ N L++ K G L A G++++ D V++ +L + G+ + A L
Sbjct: 360 SIYSYNILMDGLCKLGML-SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 427 FREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLG 486
+EM+ + P+ T +L + +G I E R M+ + +G+D V C + + G
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK---GYGLDTVTCNIIVDG 475
Query: 487 RGGYVAEAQSLAKKYSKTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLE------- 539
G SG + E++ G HG G+ Y+ ++
Sbjct: 476 LCG---------------SGELDKAIEIVKGM-RVHGSAALGNLGNSYIGLVDDSLIENN 519
Query: 540 --PEKEVGYVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGS 580
P+ + Y L N C +G++ EA+ + EM+ G K P S
Sbjct: 520 CLPDL-ITYSTLLNGLCKAGRFAEAKNLFAEMM--GEKLQPDS 559
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 161/398 (40%), Gaps = 50/398 (12%)
Query: 203 QPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAME 262
+P + ++ L+ +C + R + + ++ ++ G + N ++ C A E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 263 MFNSFG----AFNQVSWNAIIDAHMKLGDTQK------AFLAFQQAPDKNIVSWTSMIVG 312
+F+ N+ ++ ++ + K G T K A +F P+K V + +++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK--VIYNTIVSS 226
Query: 313 YTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCII--RRGLD 370
+ R G + + M M + LV V A+ GK++ + I LD
Sbjct: 227 FCREGRNDDSEKMVEKMRE-----EGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD 281
Query: 371 KYL-------FVGNSLVNMYAKCGDLEGSALAFCGILEKD----LVSWNSMLFAFGLHGR 419
+YL N ++ + K G LE + F I E D L S+N L HG+
Sbjct: 282 EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGK 341
Query: 420 ANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVA 479
EA + ++M G+ P ++ ++ LG++ + M G+
Sbjct: 342 FIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN-GVCPDAVTYG 400
Query: 480 CMVDMLGRGGYVAEAQSLAKKYSKTSGARTNSY--EVLLGACHAHGDLGTGSSVGEYLKT 537
C++ G V A+SL ++ + + N+Y +LL H+ +G S E L+
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNN-CLPNAYTCNILL---HSLWKMGRISEAEELLRK 456
Query: 538 LEPEKEVGY--------VMLSNLYCASGQWKEA-EIVR 566
+ E GY +++ L C SG+ +A EIV+
Sbjct: 457 M---NEKGYGLDTVTCNIIVDGL-CGSGELDKAIEIVK 490
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 99/481 (20%), Positives = 202/481 (41%), Gaps = 32/481 (6%)
Query: 105 YRSSLPVANSLIDMYGKCLKPHDARKVFDEMADSNE----VTWCSLLFAYANSSLFGMAL 160
YR L N L DM K DA +F M S V + LL A A F + +
Sbjct: 53 YREIL--RNGLHDM-----KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVI 105
Query: 161 EVFRSMPERVEI-----AWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNA 215
+ M +R+EI +N +I RR ++ L L +M + Y+P T S+L+N
Sbjct: 106 SLGEKM-QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 164
Query: 216 CTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF----N 271
+ + + +++ G+ +++ S+A+ + + N
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 224
Query: 272 QVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTSMIVGYTRNGNGELALSMFL 327
V++ +++ K GDT A + + ++V + ++I + + + AL++F
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 328 DMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCG 387
+M I+ + + +++ S + + S +I + ++ L N+L++ + K G
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 388 DLEGSALAFCGILEK----DLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFT 443
+ + ++++ D+ ++NS++ F +H R ++A +F MV+ PD VT+
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 444 GMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAKK-YS 502
++ +++G FR MS GL ++ L G AQ + K+ S
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHR-GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 503 KTSGARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVG-YVMLSNLYCASGQWKE 561
+Y +LL +G L V +Y++ E + ++ Y + C +G+ +
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 562 A 562
Sbjct: 524 G 524
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/507 (19%), Positives = 213/507 (42%), Gaps = 24/507 (4%)
Query: 40 VAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPDSFSYSAALSACAGGSHHGFGSVIHAL 99
V +N +++A + + + +SL M+ ++Y+ ++ S +
Sbjct: 86 VEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGK 145
Query: 100 VVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFDEMAD----SNEVTWCSLLFAYANSSL 155
++ GY S+ +SL++ Y + DA + D+M + + +T+ +L+ +
Sbjct: 146 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 205
Query: 156 FGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSA 211
A+ + M +R + + ++ G +RG+ + L L +M + + D F+
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 212 LMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAF- 270
++++ + R + + + G + +S++S SDA ++ +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 271 ---NQVSWNAIIDAHMKLGDTQKAFLAF----QQAPDKNIVSWTSMIVGYTRNGNGELAL 323
N V++NA+IDA +K G +A + +++ D +I ++ S++ G+ + + A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 324 SMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMY 383
MF M D + ++ + G + + RGL +L+
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 384 AKCGDLEGSALAFCGI----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDE 439
GD + + F + + D+++++ +L +G+ +A+ +F M S +K D
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 440 VTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVAEAQSLAK 499
+T M+ G +D+G+ F S+S + G+ + M+ L + EA +L K
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 500 KYSKTSGARTNS--YEVLLGACHAHGD 524
K K G NS Y L+ A GD
Sbjct: 565 KM-KEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 138/367 (37%), Gaps = 55/367 (14%)
Query: 18 LARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
L + G A L ++M + D V +N +I + +L+LF M +P+
Sbjct: 235 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 294
Query: 74 SFSYSAALSACAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARKVFD 133
+YS+ +S S + + ++ +L N+LID + K K +A K++D
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 134 EMAD---------------------------------------SNEVTWCSLLFAYANSS 154
+M + VT+ +L+ + S
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 155 LFGMALEVFRSMPER----VEIAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFS 210
E+FR M R + + T+I G G+ + +FK+M PD T+S
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 211 ALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFG-- 268
L++ + + V ++ KS + + +++ K D ++F S
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 269 --AFNQVSWNAIIDAHMKLGDTQKAFLAFQQ----APDKNIVSWTSMIVGYTRNGNGELA 322
N V++N +I Q+A+ ++ P N ++ ++I + R+G+ +
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAAS 594
Query: 323 LSMFLDM 329
+ +M
Sbjct: 595 AELIREM 601
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 118/544 (21%), Positives = 223/544 (40%), Gaps = 78/544 (14%)
Query: 74 SFSYSAALSACAGGSHHGF---GSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDARK 130
S + S L +G H F S++H L ++ + +I+ Y + + +
Sbjct: 56 SHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSIS 115
Query: 131 VFDEMADSNEVTWCS----LLFAYANSSLFGMALEVFRSMPERVEI---AWNTMIAGHAR 183
F+EM D+ V + LL SS F F +V + ++ +I G
Sbjct: 116 YFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCE 175
Query: 184 RGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEV 243
GE+E L E+ E + P+ ++ L++ C + ++ + + K G +
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 244 KNSILSFYAKLECPSDAMEMFNSF---GAF-NQVSWNAIIDAHMKLGDTQKAFLAFQQAP 299
+++ K EM+ G F N ++N +++ K G T+ AF F +
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 300 DK----NIVSWTSMIVGYTRNGNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILA 355
++ NIV++ ++I G R +M N A V+ S
Sbjct: 296 ERGVSCNIVTYNTLIGGLCR------------EMKLNE-------ANKVVDQMKS----- 331
Query: 356 HGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILE-----KDLVSWNSM 410
G++ L N+L++ + G L G AL+ C L+ LV++N +
Sbjct: 332 -----------DGINPNLITYNTLIDGFCGVGKL-GKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 411 LFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFG 470
+ F G + A + +EM G+KP +VT+T ++ T + +++ SM E G
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME-ELG 438
Query: 471 LSHGMDHVACMVDMLGRGGYVAEA----QSLAKKYSKTSGARTNSYEVLLGACHAHGDLG 526
L + + ++ G + EA +S+ +K + + N+ ++LG C G
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT--MILGYCKE----G 492
Query: 527 TGSSVGEYLKTLEPEKEVG-----YVMLSNLYCASGQWKEAEIVRKEMLDQGVKKVPGSS 581
+ + LK +E EKE+ Y + + C + KEAE + ++M+D G+ P +S
Sbjct: 493 SSYRALKLLKEME-EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGID--PSTS 549
Query: 582 WIEI 585
+ +
Sbjct: 550 ILSL 553
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 20/250 (8%)
Query: 18 LARSGRICHARKLFDEMP----DRDSVAWNAMITAYSHLGLYQQSLSLFGSMRISNSKPD 73
L R ++ A K+ D+M + + + +N +I + +G ++LSL ++ P
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 74 SFSYSAALSA-CAGGSHHGFGSVIHALVVVSGYRSSLPVANSLIDMYGKCLKPHDA---R 129
+Y+ +S C G G ++ + G + S LID + + A R
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEE-RGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 130 KVFDEMADSNEV-TWCSLLFAYANSSLFGMALEVFRSMPERV----EIAWNTMIAGHARR 184
+E+ +V T+ L+ + A +F+SM E+ E+ +NTMI G+ +
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 185 GEVEACLGLFKEMCESLYQPDQWTFSALMNA-CTESRDMLYGCMVHGFVIKSGWSSAMEV 243
G L L KEM E P+ ++ ++ C E + +V + S ++
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI-----DSGIDP 546
Query: 244 KNSILSFYAK 253
SILS ++
Sbjct: 547 STSILSLISR 556
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 159/373 (42%), Gaps = 32/373 (8%)
Query: 113 NSLIDMYGKCLKPHDARKVFDEMA----DSNEVTWCSLLFAYANSSLFGMALEVFRSMPE 168
N +I+ K K + AR V ++M N V++ +L+ Y G + + E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 169 RVE-------IAWNTMIAGHARRGEVEACLGLFKEMCESLYQPDQWTFSALMNACTESRD 221
VE +N +I G + + + +FKEM + +P+ ++++L+N
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 222 MLYGCMVHGFVIKSGWSSAMEVKNSILSFYAKLECPSDAMEMFNSFGAFNQVS----WNA 277
+ + ++ +G + N++++ + K + +A++MF S V +N
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 278 IIDAHMKLGDTQKAFLAFQQAPDKNIV----SWTSMIVGYTRNGNGELALSMFLDMTRNS 333
+IDA+ KLG F ++ + IV ++ +I G RNGN E A +F +T S
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT--S 464
Query: 334 IQLDNLVAGAVL-HACASLAILAHGKMVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGS 392
L +LV +L M+ + + GL N ++ Y K G+L+ +
Sbjct: 465 KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 393 ALAFCGI-----LEKDLVSWNSMLFAFGLHGRANEAMCLFREMVASGVKPDEVTFTGMLM 447
+ L ++ S+N +L + G+ +A L EM+ G+ P+ +T+
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY----- 579
Query: 448 TCSHLGLIDEGFA 460
++D+GF
Sbjct: 580 EIVKEEMVDQGFV 592
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 116/486 (23%), Positives = 200/486 (41%), Gaps = 98/486 (20%)
Query: 139 NEVTWCSLLFAYANSSLFGMALEVF-RSMPERVEIA----WNTMIA--GHARRGEVEACL 191
N + L+ AYAN+S F + E F RS +++ MIA R +VE
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEY-- 209
Query: 192 GLFKEMCESLYQPDQWTFSALMNACTESRDMLYGCMVHGFVIKSGWSSAMEVKNSILSFY 251
++KEM QP+ +TF+ ++NA + K+G
Sbjct: 210 -VYKEMIRRKIQPNVFTFNVVINA----------------LCKTG--------------- 237
Query: 252 AKLECPSDAMEMFNSFG-AFNQVSWNAIIDAHMKLGDTQKAFLA-------FQQAPDKNI 303
K+ D ME +G + N VS+N +ID + KLG K + A + N+
Sbjct: 238 -KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNL 296
Query: 304 VSWTSMIVGYTRNGNGELALSMF-----LDMTRNSIQLDNLVAGAVLHACASLAILAHGK 358
++ +I G+ ++ N ++ +F D+ N I ++L+ G S AI K
Sbjct: 297 TTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK 356
Query: 359 MVHSCIIRRGLDKYLFVGNSLVNMYAKCGDLEGSALAFCGILEKDLVS----WNSMLFAF 414
MV + G+ L N+L+N + K L+ + F + + V +N ++ A+
Sbjct: 357 MVSA-----GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 415 GLHGRANEAMCLFREMVASGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHG 474
G+ ++ L EM G+ PD T+ ++ G I+ F ++S+ GL
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK-GLP-- 468
Query: 475 MDHVACMVDMLG--RGGYVAEAQSLAKKYSKTS-GARTNSYEVLLGACHAHGDLGTGSSV 531
D V + M G R G +A L K+ SK R +Y +++ G+L +++
Sbjct: 469 -DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 532 GEYLKTLEPEKEV-----GYVMLSNLYCASGQWKEA-------------------EIVRK 567
+E E+ + Y +L Y G+ ++A EIV++
Sbjct: 528 RT---QMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 568 EMLDQG 573
EM+DQG
Sbjct: 585 EMVDQG 590
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 136/324 (41%), Gaps = 44/324 (13%)
Query: 262 EMFNSFGAFNQVSWNAIIDAHMKLGDTQKAFLAFQQAP----DKNIVSWTSMIVGYTR-N 316
EM N ++N +I+A K G KA + N+VS+ ++I GY +
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 317 GNGELALSMFLDMTRNSIQLDNLVAGAVLHACASLAILAHGKMVHSCIIRRGLDKYLFVG 376
GNG++ A AVL ++ + L
Sbjct: 273 GNGKM-----------------YKADAVLKE----------------MVENDVSPNLTTF 299
Query: 377 NSLVNMYAKCGDLEGSALAFCGILEKDL----VSWNSMLFAFGLHGRANEAMCLFREMVA 432
N L++ + K +L GS F +L++D+ +S+NS++ G+ +EA+ + +MV+
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 433 SGVKPDEVTFTGMLMTCSHLGLIDEGFAFFRSMSSEFGLSHGMDHVACMVDMLGRGGYVA 492
+GV+P+ +T+ ++ ++ E F S+ + G ++D + G +
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ-GAVPTTRMYNMLIDAYCKLGKID 418
Query: 493 EAQSLAKKYSKTS-GARTNSYEVLLGACHAHGDLGTGSSVGEYLKTLEPEKEVGYVMLSN 551
+ +L ++ + +Y L+ +G++ + + L + V + +L
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILME 478
Query: 552 LYCASGQWKEAEIVRKEMLDQGVK 575
YC G+ ++A ++ KEM G+K
Sbjct: 479 GYCRKGESRKAAMLLKEMSKMGLK 502