Miyakogusa Predicted Gene

Lj4g3v2373750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2373750.1 Non Chatacterized Hit- tr|B4FLD5|B4FLD5_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,48.75,0.00000000009,Motile_Sperm,Major sperm protein; MSP,Major
sperm protein; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOC,CUFF.50868.1
         (291 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08820.2 | Symbols: VAP27-2 | vamp/synaptobrevin-associated p...   155   2e-38
AT1G08820.1 | Symbols: VAP27-2 | vamp/synaptobrevin-associated p...   155   2e-38
AT2G45140.1 | Symbols: PVA12 | plant VAP homolog 12 | chr2:18611...   153   1e-37
AT3G60600.1 | Symbols: VAP27-1, VAP, (AT)VAP, VAP27 | vesicle as...   151   6e-37
AT3G60600.3 | Symbols: VAP27-1 | vesicle associated protein | ch...   149   2e-36
AT4G00170.1 | Symbols:  | Plant VAMP (vesicle-associated membran...   149   2e-36
AT3G60600.2 | Symbols: VAP27-1 | vesicle associated protein | ch...   149   3e-36
AT5G47180.2 | Symbols:  | Plant VAMP (vesicle-associated membran...   147   6e-36
AT5G47180.1 | Symbols:  | Plant VAMP (vesicle-associated membran...   147   6e-36
AT2G23830.1 | Symbols:  | PapD-like superfamily protein | chr2:1...   131   6e-31
AT1G51270.2 | Symbols:  | structural molecules;transmembrane rec...   124   7e-29
AT1G51270.1 | Symbols:  | structural molecules;transmembrane rec...   124   1e-28
AT1G51270.3 | Symbols:  | structural molecules;transmembrane rec...   123   1e-28
AT1G51270.4 | Symbols:  | structural molecules;transmembrane rec...   120   1e-27

>AT1G08820.2 | Symbols: VAP27-2 | vamp/synaptobrevin-associated
           protein 27-2 | chr1:2821810-2824412 REVERSE LENGTH=386
          Length = 386

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 86/119 (72%)

Query: 1   MTTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRP 60
           M   LL  +P  L+F  +LKKQ+SC++QL N    Y+AFKVKTTSPKKYCVRPN G++ P
Sbjct: 1   MNMPLLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAP 60

Query: 61  NETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
             TC+FTV MQA +  PPDM CKDKFLIQST +    T++DIT+ MFSK  GK IEE K
Sbjct: 61  KSTCEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENK 119



 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 54/82 (65%)

Query: 210 QLNLAEDSEELKSKLNIMDSKLRGAEATIMMLNEERRMNTKEKDFFKRELEVLKKKINTK 269
           +L L +D EE+K K++ ++SKL+ A++TI  L EER ++++ +   + EL  L+ K   K
Sbjct: 300 ELKLVKDIEEMKLKVDALESKLKQADSTISKLMEERSISSQHRQSLQHELAELRTKKIVK 359

Query: 270 GVQTGFPLLFVCMVALKSGCIG 291
            V  GFPLL+VC+VA  +  IG
Sbjct: 360 EVHNGFPLLYVCVVAFIAYVIG 381


>AT1G08820.1 | Symbols: VAP27-2 | vamp/synaptobrevin-associated
           protein 27-2 | chr1:2821810-2824412 REVERSE LENGTH=386
          Length = 386

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 86/119 (72%)

Query: 1   MTTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRP 60
           M   LL  +P  L+F  +LKKQ+SC++QL N    Y+AFKVKTTSPKKYCVRPN G++ P
Sbjct: 1   MNMPLLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAP 60

Query: 61  NETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
             TC+FTV MQA +  PPDM CKDKFLIQST +    T++DIT+ MFSK  GK IEE K
Sbjct: 61  KSTCEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENK 119



 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 54/82 (65%)

Query: 210 QLNLAEDSEELKSKLNIMDSKLRGAEATIMMLNEERRMNTKEKDFFKRELEVLKKKINTK 269
           +L L +D EE+K K++ ++SKL+ A++TI  L EER ++++ +   + EL  L+ K   K
Sbjct: 300 ELKLVKDIEEMKLKVDALESKLKQADSTISKLMEERSISSQHRQSLQHELAELRTKKIVK 359

Query: 270 GVQTGFPLLFVCMVALKSGCIG 291
            V  GFPLL+VC+VA  +  IG
Sbjct: 360 EVHNGFPLLYVCVVAFIAYVIG 381


>AT2G45140.1 | Symbols: PVA12 | plant VAP homolog 12 |
           chr2:18611029-18612971 FORWARD LENGTH=239
          Length = 239

 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 89/119 (74%)

Query: 1   MTTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRP 60
           M+ ELL  +P +L+F FELKKQ SC + L NK D Y+AFKVKTT+PKKYCVRPNTG++ P
Sbjct: 1   MSNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHP 60

Query: 61  NETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
             + +  VTMQAQ+ AP D+QCKDKFL+Q  V   GAT  D+T +MFSK++G  +EE K
Sbjct: 61  RSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETK 119


>AT3G60600.1 | Symbols: VAP27-1, VAP, (AT)VAP, VAP27 | vesicle
           associated protein | chr3:22400537-22402408 FORWARD
           LENGTH=256
          Length = 256

 Score =  151 bits (381), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 87/117 (74%)

Query: 3   TELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPNE 62
           +ELL  EP +L+F FELKKQ SC + L NK D  +AFKVKTT+PKKYCVRPNTG++ P  
Sbjct: 20  SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79

Query: 63  TCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
           TC+  VTMQAQ+ AP DMQCKDKFL+Q  +   G T  ++T +MFSK++G  +EE K
Sbjct: 80  TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136


>AT3G60600.3 | Symbols: VAP27-1 | vesicle associated protein |
           chr3:22400537-22401669 FORWARD LENGTH=230
          Length = 230

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 87/117 (74%)

Query: 3   TELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPNE 62
           +ELL  EP +L+F FELKKQ SC + L NK D  +AFKVKTT+PKKYCVRPNTG++ P  
Sbjct: 20  SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79

Query: 63  TCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
           TC+  VTMQAQ+ AP DMQCKDKFL+Q  +   G T  ++T +MFSK++G  +EE K
Sbjct: 80  TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136


>AT4G00170.1 | Symbols:  | Plant VAMP (vesicle-associated membrane
           protein) family protein | chr4:70732-72085 REVERSE
           LENGTH=239
          Length = 239

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 68/119 (57%), Positives = 93/119 (78%), Gaps = 1/119 (0%)

Query: 2   TTELLQTEPAELRFVFELKKQSSCLIQLVNKVD-QYIAFKVKTTSPKKYCVRPNTGIIRP 60
           T +L+   P EL+F FELKKQSSC +QL NK   Q +AFKVKTT+P+KYCVRPNTG++ P
Sbjct: 3   TGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLP 62

Query: 61  NETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
            ++C+ TVTMQAQ+ AP DMQCKDKFL+Q+ V+  G T  ++ ++MF+K++G+ IE+ K
Sbjct: 63  GDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFK 121


>AT3G60600.2 | Symbols: VAP27-1 | vesicle associated protein |
           chr3:22400537-22401650 FORWARD LENGTH=217
          Length = 217

 Score =  149 bits (375), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 69/117 (58%), Positives = 87/117 (74%)

Query: 3   TELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPNE 62
           +ELL  EP +L+F FELKKQ SC + L NK D  +AFKVKTT+PKKYCVRPNTG++ P  
Sbjct: 20  SELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRS 79

Query: 63  TCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
           TC+  VTMQAQ+ AP DMQCKDKFL+Q  +   G T  ++T +MFSK++G  +EE K
Sbjct: 80  TCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136


>AT5G47180.2 | Symbols:  | Plant VAMP (vesicle-associated membrane
           protein) family protein | chr5:19161384-19163265 REVERSE
           LENGTH=220
          Length = 220

 Score =  147 bits (372), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 90/116 (77%)

Query: 4   ELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPNET 63
           +L+  +P EL+F+FEL+KQS C +++ NK + Y+AFKVKTTSPKKY VRPNTG+I+P ++
Sbjct: 8   QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67

Query: 64  CDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
           C   VT+QAQR  PPDMQCKDKFL+QST++P     D++  D F+KDSGK + E K
Sbjct: 68  CIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECK 123


>AT5G47180.1 | Symbols:  | Plant VAMP (vesicle-associated membrane
           protein) family protein | chr5:19161384-19163265 REVERSE
           LENGTH=220
          Length = 220

 Score =  147 bits (372), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 67/116 (57%), Positives = 90/116 (77%)

Query: 4   ELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPNET 63
           +L+  +P EL+F+FEL+KQS C +++ NK + Y+AFKVKTTSPKKY VRPNTG+I+P ++
Sbjct: 8   QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67

Query: 64  CDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
           C   VT+QAQR  PPDMQCKDKFL+QST++P     D++  D F+KDSGK + E K
Sbjct: 68  CIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECK 123


>AT2G23830.1 | Symbols:  | PapD-like superfamily protein |
           chr2:10143646-10144511 FORWARD LENGTH=149
          Length = 149

 Score =  131 bits (329), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 79/116 (68%)

Query: 4   ELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPNET 63
           ELL+ EP  L+F FELKKQ SC + L NK D  +AFKVKTT+   YCVRPN G+I P  T
Sbjct: 5   ELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILPKST 64

Query: 64  CDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
           C   VTMQAQ+  P DMQ  +KF+IQS +   G T  ++T +MFSK+SG  +EE K
Sbjct: 65  CKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120


>AT1G51270.2 | Symbols:  | structural molecules;transmembrane
           receptors;structural molecules | chr1:19007577-19010496
           FORWARD LENGTH=531
          Length = 531

 Score =  124 bits (311), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 77/116 (66%)

Query: 2   TTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPN 61
           T ELL  +  ++RF  EL KQ SC + L NK D Y+AFK +TT PK YCV+P+ G++ P 
Sbjct: 3   TDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPR 62

Query: 62  ETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEE 117
            +C+  V MQA + AP D QCKDK L Q  V+  G  + ++TS+MFSK++G  +EE
Sbjct: 63  SSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEE 118



 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 79/119 (66%)

Query: 1   MTTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRP 60
           M+ ELL  +P +++F  EL K+ SC + L NK + Y+AFK KTT+ KKY VRPN G++ P
Sbjct: 172 MSDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLP 231

Query: 61  NETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
             +C+  V MQA + AP DMQC+DK L Q  V+    T  D+TS+MFSK++G   EE +
Sbjct: 232 RSSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETR 290


>AT1G51270.1 | Symbols:  | structural molecules;transmembrane
           receptors;structural molecules | chr1:19007577-19010411
           FORWARD LENGTH=571
          Length = 571

 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 77/116 (66%)

Query: 2   TTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPN 61
           T ELL  +  ++RF  EL KQ SC + L NK D Y+AFK +TT PK YCV+P+ G++ P 
Sbjct: 3   TDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPR 62

Query: 62  ETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEE 117
            +C+  V MQA + AP D QCKDK L Q  V+  G  + ++TS+MFSK++G  +EE
Sbjct: 63  SSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEE 118



 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 79/119 (66%)

Query: 1   MTTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRP 60
           M+ ELL  +P +++F  EL K+ SC + L NK + Y+AFK KTT+ KKY VRPN G++ P
Sbjct: 172 MSDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLP 231

Query: 61  NETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
             +C+  V MQA + AP DMQC+DK L Q  V+    T  D+TS+MFSK++G   EE +
Sbjct: 232 RSSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETR 290


>AT1G51270.3 | Symbols:  | structural molecules;transmembrane
           receptors;structural molecules | chr1:19007577-19011225
           FORWARD LENGTH=637
          Length = 637

 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 77/116 (66%)

Query: 2   TTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPN 61
           T ELL  +  ++RF  EL KQ SC + L NK D Y+AFK +TT PK YCV+P+ G++ P 
Sbjct: 3   TDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPR 62

Query: 62  ETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEE 117
            +C+  V MQA + AP D QCKDK L Q  V+  G  + ++TS+MFSK++G  +EE
Sbjct: 63  SSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEE 118



 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 79/119 (66%)

Query: 1   MTTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRP 60
           M+ ELL  +P +++F  EL K+ SC + L NK + Y+AFK KTT+ KKY VRPN G++ P
Sbjct: 172 MSDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLP 231

Query: 61  NETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
             +C+  V MQA + AP DMQC+DK L Q  V+    T  D+TS+MFSK++G   EE +
Sbjct: 232 RSSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETR 290


>AT1G51270.4 | Symbols:  | structural molecules;transmembrane
           receptors;structural molecules | chr1:19007577-19011225
           FORWARD LENGTH=467
          Length = 467

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/118 (48%), Positives = 77/118 (65%)

Query: 2   TTELLQTEPAELRFVFELKKQSSCLIQLVNKVDQYIAFKVKTTSPKKYCVRPNTGIIRPN 61
           T ELL  +  ++RF  EL K+ SC + L NK + Y+AFK KTT+ KKY VRPN G++ P 
Sbjct: 3   TDELLTFDHVDIRFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 62

Query: 62  ETCDFTVTMQAQRAAPPDMQCKDKFLIQSTVIPFGATEDDITSDMFSKDSGKFIEEKK 119
            +C+  V MQA + AP DMQC+DK L Q  V+    T  D+TS+MFSK++G   EE +
Sbjct: 63  SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETR 120