Miyakogusa Predicted Gene

Lj4g3v2371650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2371650.1 tr|B9P6U2|B9P6U2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_593580 PE=3
SV=1,56.76,1e-18,INTEGRAL MEMBRANE FAMILY PROTEIN,NULL; NITRATE,
FROMATE, IRON DEHYDROGENASE,NULL; seg,NULL; A_tha_TI,CUFF.50841.1
         (193 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF049...   137   4e-33
AT4G15620.1 | Symbols:  | Uncharacterised protein family (UPF049...   132   1e-31
AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF049...    66   2e-11
AT3G06390.1 | Symbols:  | Uncharacterised protein family (UPF049...    64   6e-11
AT4G20390.1 | Symbols:  | Uncharacterised protein family (UPF049...    61   4e-10
AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF049...    61   4e-10
AT4G15610.1 | Symbols:  | Uncharacterised protein family (UPF049...    60   1e-09
AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF049...    57   9e-09
AT5G44550.1 | Symbols:  | Uncharacterised protein family (UPF049...    57   1e-08
AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF049...    54   5e-08
AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF049...    47   6e-06

>AT4G15630.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8917527-8918683 FORWARD LENGTH=190
          Length = 190

 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 96/154 (62%), Gaps = 1/154 (0%)

Query: 11  EGVENSKGREKAAVGGACDXXXXXXXXXXXXXXXIVVGVDNHTKVVPIKILDGLPPVNVP 70
           +G+E  KG++++      +                V+GV   TKVVPIK++  LPP+NV 
Sbjct: 10  DGMEMEKGKKESGSRKGLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVS 69

Query: 71  VPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGK-SRGLGSLITVLDALMVALLFS 129
             AK  YLSAFVY + ANAIA  Y A S+V+ +I+KGK S+ L   + + D +MVALLFS
Sbjct: 70  TTAKASYLSAFVYNISANAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFS 129

Query: 130 GNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
             GAA A+G++G +GN HV WKKVC VF  FC+Q
Sbjct: 130 STGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQ 163


>AT4G15620.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8913935-8915531 FORWARD LENGTH=190
          Length = 190

 Score =  132 bits (333), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 99/164 (60%), Gaps = 2/164 (1%)

Query: 1   MEGQGKAMMMEGVENSKGREKAAVGGACDXXXXXXXXXXXXXXXIVVGVDNHTKVVPIKI 60
           ME +GK  M  G+E  KG+ +       +                V+GV   TKVV IK+
Sbjct: 1   MEHEGKNNM-NGMEMEKGKRELGSRKGVELTMRVLALILTMAAATVLGVAKQTKVVSIKL 59

Query: 61  LDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGK-SRGLGSLITVL 119
           +  LPP+++   AK  YLSAFVY +  NAIA  Y A S+ + +I++G+ S+ L  ++ + 
Sbjct: 60  IPTLPPLDITTTAKASYLSAFVYNISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLG 119

Query: 120 DALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
           D +MVALLFSG GAASA+G++G +GN HV WKKVC VF  FCH+
Sbjct: 120 DLVMVALLFSGTGAASAIGLMGLHGNKHVMWKKVCGVFGKFCHR 163


>AT5G15290.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:4967094-4967846 FORWARD LENGTH=187
          Length = 187

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 2/97 (2%)

Query: 69  VPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIIN--KGKSRGLGSLITVLDALMVAL 126
           +   A+++ L A  +F+VANA+ S Y   SL LA ++  K K++    L+ +LD  M+ L
Sbjct: 61  IRFQAEYNDLPALTFFVVANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGL 120

Query: 127 LFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
           L SG  +A+A+  L + GN+   W  +C  F++FC +
Sbjct: 121 LTSGASSAAAIVYLAHNGNNKTNWFAICQQFNSFCER 157


>AT3G06390.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr3:1938913-1939707 REVERSE LENGTH=199
          Length = 199

 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 5/107 (4%)

Query: 61  LDGLPPVNVPVP--AKWHYLSAFVYFLVANAIASTYGAFSLVLAI---INKGKSRGLGSL 115
           +  LP V+ P P  A+++   AF+YF+VA  +AS Y   S +++I   +    +      
Sbjct: 64  MTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQFSIY 123

Query: 116 ITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCH 162
           +  LD +M+ +L S  G A  V  +   GN  V W K+CNV+D FC 
Sbjct: 124 LASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICNVYDKFCR 170


>AT4G20390.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:11007068-11007869 FORWARD LENGTH=197
          Length = 197

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 45  IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
           IV+ ++  TK + +  + G  P+   + AK+ +  AFV+F++AN + S +    +V+ I 
Sbjct: 35  IVMSLNKETKTLVVATI-GTVPIKATLTAKFQHTPAFVFFVIANVMVSFHNLLMIVVQIF 93

Query: 105 N-KGKSRGLGSL-ITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFC 161
           + K + +GL  L I +LD L   L+ +   AA  V  LG  GN H +W KVC+ F  +C
Sbjct: 94  SRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAKWNKVCDRFTTYC 152


>AT1G14160.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:4840798-4841660 REVERSE LENGTH=209
          Length = 209

 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)

Query: 69  VPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVL--DALMVAL 126
           V +  K+  L   ++F+VANAI+  Y   SL ++I +   ++   S I +L  D +M+AL
Sbjct: 84  VLLKVKYSDLPTLMFFVVANAISGGYLVLSLPVSIFHIFSTQAKTSRIILLVVDTVMLAL 143

Query: 127 LFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
           + SG  AA+A   L + GN+   W  +C  FD FC +
Sbjct: 144 VSSGASAATATVYLAHEGNTTANWPPICQQFDGFCER 180


>AT4G15610.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:8909162-8910641 FORWARD LENGTH=193
          Length = 193

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 4/101 (3%)

Query: 66  PVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLI---TVLDAL 122
           P+ +P  A++    A +YF+VA ++A  Y   S  + +    K      L+    ++DA+
Sbjct: 63  PIRIP-AAEFTNSPALIYFVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAV 121

Query: 123 MVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
           MV ++ S  GA   V  LG  GN  V+W K+C+++D FC  
Sbjct: 122 MVGIVASATGAGGGVAYLGLKGNKEVRWGKICHIYDKFCRH 162


>AT4G03540.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr4:1570042-1571483 FORWARD LENGTH=164
          Length = 164

 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 69  VPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVLDALMVALLF 128
           + + AK+  ++AF YF++ANA+ S Y    L L      K   L   + VLD +M  LL 
Sbjct: 40  ISLEAKYTDMAAFKYFVIANAVVSVYSFLVLFLP-----KESLLWKFVVVLDLVMTMLLT 94

Query: 129 SGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
           S   AA AV  +G  GN++  W  +C     FC Q
Sbjct: 95  SSLSAALAVAQVGKKGNANAGWLPICGQVPKFCDQ 129


>AT5G44550.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr5:17942100-17943174 REVERSE LENGTH=197
          Length = 197

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 3/121 (2%)

Query: 45  IVVGVDNHTKVVPIKILDGLPPVNVPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAII 104
           IV+G++  TK   +  + G  P+     AK+ +  AFV+F+VANA+ S +    + L I 
Sbjct: 35  IVMGLNKETKTFIVGKV-GNTPIQATFTAKFDHTPAFVFFVVANAMVSFHNLLMIALQIF 93

Query: 105 N-KGKSRGLGSL-ITVLDALMVALLFSGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCH 162
             K +  G   L + +LD L V L+ +   AA+ +  +G  GN H +W K+C+ F  +C 
Sbjct: 94  GGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKHARWDKICDRFATYCD 153

Query: 163 Q 163
            
Sbjct: 154 H 154


>AT1G03700.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr1:921038-921844 FORWARD LENGTH=164
          Length = 164

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 69  VPVPAKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVLDALMVALLF 128
           + + AK+  L+AF YF++ANAI + Y    L L      K   L   + VLD ++  LL 
Sbjct: 40  ISLVAKYSDLAAFKYFVIANAIVTVYSFLVLFLP-----KESLLWKFVVVLDLMVTMLLT 94

Query: 129 SGNGAASAVGVLGYYGNSHVQWKKVCNVFDNFCHQ 163
           S   AA AV  +G  GN++  W  +C     FC Q
Sbjct: 95  SSLSAAVAVAQVGKRGNANAGWLPICGQVPRFCDQ 129


>AT2G36100.1 | Symbols:  | Uncharacterised protein family (UPF0497)
           | chr2:15159744-15160669 REVERSE LENGTH=206
          Length = 206

 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 73  AKWHYLSAFVYFLVANAIASTYGAFSLVLAIINKGKSRGLGSLITVL--DALMVALLFSG 130
           A +  L AF YF++A A+ ++Y   SL  +I++  +   +   + +L  D L+V L  S 
Sbjct: 85  AGYDDLPAFQYFVIAVAVVASYLVLSLPFSIVSIVRPHAVAPRLILLICDTLVVTLNTSA 144

Query: 131 NGAASAVGVLGYYGNSHVQWKKVCNVFDNFCH 162
             AA+++  L + GN    W  +C  F +FC 
Sbjct: 145 AAAAASITYLAHNGNQSTNWLPICQQFGDFCQ 176