Miyakogusa Predicted Gene
- Lj4g3v2370470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2370470.1 tr|G7JJ56|G7JJ56_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_4g1,79.34,0,FAMILY NOT NAMED,NULL; TPR-like,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide repeat;
,CUFF.50832.1
(579 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 647 0.0
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 381 e-106
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 373 e-103
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 367 e-101
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 362 e-100
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 358 6e-99
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 8e-97
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 7e-95
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 343 2e-94
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 340 1e-93
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 324 1e-88
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 3e-87
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 318 8e-87
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 2e-86
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 6e-86
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 314 1e-85
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 6e-85
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 310 2e-84
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 306 4e-83
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 5e-83
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 6e-83
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 305 6e-83
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 1e-82
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 303 3e-82
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 5e-81
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 298 6e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 298 6e-81
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 296 2e-80
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 4e-80
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 294 1e-79
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 1e-78
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 9e-78
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 287 1e-77
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 5e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 3e-75
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 9e-75
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 278 1e-74
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 277 1e-74
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 274 1e-73
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 4e-73
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 271 9e-73
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 267 1e-71
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 1e-71
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 8e-71
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 265 9e-71
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 263 2e-70
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 260 2e-69
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 260 2e-69
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 260 2e-69
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 256 2e-68
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 8e-68
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 2e-67
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 244 2e-64
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 239 4e-63
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 4e-63
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 7e-63
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 237 2e-62
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 5e-61
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 7e-60
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 8e-60
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 227 2e-59
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 226 4e-59
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 2e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 4e-58
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 222 5e-58
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 220 2e-57
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 8e-57
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 215 6e-56
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 8e-56
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 214 1e-55
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 1e-53
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 9e-53
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 202 7e-52
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 200 2e-51
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 8e-51
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 9e-51
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 9e-51
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 1e-50
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 192 6e-49
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 7e-49
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 1e-47
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 5e-46
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 153 4e-37
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 2e-32
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 3e-32
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 7e-31
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 9e-31
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 9e-31
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 132 9e-31
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 131 1e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 130 4e-30
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 129 4e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 4e-29
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 8e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 125 8e-29
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 2e-27
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 120 2e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 119 7e-27
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 119 9e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 118 1e-26
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 3e-26
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 8e-26
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 5e-25
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 111 2e-24
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 110 2e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 107 3e-23
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 107 3e-23
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 3e-23
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 106 3e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 3e-22
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 97 4e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 89 8e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 87 3e-17
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 86 6e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 79 1e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 78 2e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 77 3e-14
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 75 2e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 72 2e-12
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 70 4e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 5e-12
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 1e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 66 5e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 63 6e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 63 7e-10
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 56 6e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 6e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/574 (53%), Positives = 414/574 (72%)
Query: 1 MVATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPI 60
M+ +KL +++C L AKQ+HA +++N +HLEP+ +H L + + + YV I
Sbjct: 1 MLDSKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRI 60
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
L + DSFSWGC++RF SQ +F E V +Y+ M G+ P+SHA++S L++C ++++
Sbjct: 61 LKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENM 120
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
+ G IH Q G CVYVQT L+ LYS++G + A+K FD++AEKN VSWNSLL GY
Sbjct: 121 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGY 180
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA 240
L++G+LDEA+ +FDKIP KD +SWN +IS Y+K G+M A SLF MP ++ ASWN +I
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 241 GYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAM 300
GY++ + AR FDAMP++N VS ITMI+GY+K GDV SA +LF M +KD L Y+AM
Sbjct: 241 GYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAM 300
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
IACY QN KPK+AL+LF ML+ + PD++TL+SV+SA SQLG+ W+ES+I +
Sbjct: 301 IACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEH 360
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
G+ +DD L+T+L+DLY K G KA+++F L K+D V+YSAMI G GING A++A LF
Sbjct: 361 GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 421 EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRA 480
M+ + I PN+VT+TG+L+AY+H+GLV+EGY CFNSMKD+ L P DHYGIMVD+LGRA
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRA 480
Query: 481 GWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLS 540
G L+EAYELI +MP QPNA VWGALLLA LHNNVE GEIA HC+KLE+D GY S L+
Sbjct: 481 GRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLA 540
Query: 541 SIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
IY+++GRWDDA+ +R +K K + KT GCSW +
Sbjct: 541 MIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/578 (37%), Positives = 329/578 (56%), Gaps = 15/578 (2%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L +L++KC L H KQI A ++INGL L+P ++ + + Y IL +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLI-LDPFASSRLIAFCALSESRYLDYSVKILKGIE 114
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC---PTSHAISSALKSCARIQDKLG 122
NP+ FSW IR FS+ E+ LY QM R G C P K CA ++
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G I G V L + +V A + +++ GD+ ARKVFDE +++VSWN L++GY K
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 183 AGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTM 238
G+ ++A +++ + + V ++ ++S S G++++ ++ + E L +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 239 IAGYID----SGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
+ +D G I AR +FD + KR VS TMI+GY++ G +D + KLFD M+EKD+
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+ +NAMI Q + ++AL LF M N PD++T+ +SACSQLG L+ WI
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTS--NTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRAS 414
+I + + L+ L T+LVD+YAK G+I +A +FHG++ R+ + Y+A+I G ++G AS
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIM 473
AI F +M+ I P+ +T+ G+L+A H G+++ G F+ MK L P + HY IM
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 474 VDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTV 533
VDLLGRAG L+EA L+ +MP + +A VWGALL CR+H NVELGE A + ++L+
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 534 GYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
G Y LL +Y W+DAK+ R + + V K PGCS
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 328/578 (56%), Gaps = 13/578 (2%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHN-- 66
++ C T + QIH ++ G+ L +L + + L+ + + H H
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 67 ------PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
D F W VI+ S +A+ L M G+ ++S LK+C+R+
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
GG+ IHG + G + +++Q L+ LY K G +G +R++FD M +++ VS+NS++ GY
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 181 LKAGDLDEAQHLFDKIPG--KDVISWNSMISGYSKAGN-MDQANSLFQKMPERNLASWNT 237
+K G + A+ LFD +P K++ISWNSMISGY++ + +D A+ LF MPE++L SWN+
Sbjct: 198 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 257
Query: 238 MIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
MI GY+ G I A+ +FD MP+R+ V+ TMI GY+K G V A LFDQM +D+++Y
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
N+M+A Y QN EALE+F+ M K E ++ PD TL V+ A +QLG L + +I
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEK-ESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
+ L L AL+D+Y+K GSI A +F G+ + + ++AMI G I+G A
Sbjct: 377 VEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAF 436
Query: 418 KLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDL 476
+ Q+ ++ P+ +T+ G+L A +H+GLV+EG CF M + + + P + HYG MVD+
Sbjct: 437 DMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDI 496
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY 536
L R+G ++ A LI MP +PN +W L AC H E GE+ +H I Y
Sbjct: 497 LSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSY 556
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
LLS++YA+ G W D +++R +K + + K PGCSW +
Sbjct: 557 VLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIE 594
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/575 (34%), Positives = 341/575 (59%), Gaps = 14/575 (2%)
Query: 8 TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHIL-LWDVNNYKPLSHYVHPILHNLHN 66
+L+++C +L KQ H H++ G +P + + ++++ L Y + +
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFS-DPYSASKLFAMAALSSFASL-EYARKVFDEIPK 92
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKSCARIQDKLGGVS 125
P+SF+W +IR ++ + ++ ++ M C P + +K+ A + G S
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
+HG + V+V +L+ Y GD+ +A KVF + EK+VVSWNS+++G+++ G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 186 LDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNT 237
D+A LF K+ +DV ++ ++S +K N++ + + E NL N
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 238 MIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
M+ Y GSI A+ +FDAM ++++V+ TM+ GY+ S D ++A ++ + M +KD++++
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
NA+I+ Y QN KP EAL +F + L+ + N+ +++TL S +SAC+Q+G LE RWI S+I
Sbjct: 333 NALISAYEQNGKPNEALIVF-HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
G+ ++ H+ +AL+ +Y+K G ++K+ E+F+ + KRD+ +SAMI G ++G ++A+
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 418 KLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDL 476
+F +M N+ PN VT+T + A +H GLV+E F+ M+ N G+VP HY +VD+
Sbjct: 452 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY 536
LGR+G+L++A + I MP P+ VWGALL AC++H N+ L E+A ++LE G +
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAH 571
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
LLS+IYA LG+W++ +LR ++ + K PGCS
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/573 (35%), Positives = 314/573 (54%), Gaps = 38/573 (6%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L TL K C + H QIHA I+ GL + L I ++ Y + +
Sbjct: 13 LETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISS--SSSSSSSLSYSSSVFERVP 70
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKSCARIQDKLGGV 124
+P ++ W +I+ +S K F E VS+ ++M R GL P + +K C+ G
Sbjct: 71 SPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGS 130
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
S+HG V +G+D V V T+ +D Y K
Sbjct: 131 SVHGLVLRIGFDKDVVVGTSFVDFYGK-------------------------------CK 159
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYID 244
DL A+ +F ++P ++ +SW +++ Y K+G +++A S+F MPERNL SWN ++ G +
Sbjct: 160 DLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVK 219
Query: 245 SGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACY 304
SG +++A+++FD MPKR+ +S +MI GY+K GD+ SA LF++ D+ +++A+I Y
Sbjct: 220 SGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGY 279
Query: 305 AQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVL 364
AQN +P EA ++F+ M NV PD+ + ++SACSQ+G E ++S+++
Sbjct: 280 AQNGQPNEAFKVFSEMCAK--NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF 337
Query: 365 DDH-LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
H + AL+D+ AK G +D+A +LF + +RDLV+Y +M+ G I+G S+AI+LFE+M
Sbjct: 338 SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGW 482
+ E I P+ V +T IL + LVEEG F M+ ++ DHY +V+LL R G
Sbjct: 398 VDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGK 457
Query: 483 LDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSI 542
L EAYELI +MP + +A WG+LL C LH N E+ E+ +H +LE + G Y LLS+I
Sbjct: 458 LKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNI 517
Query: 543 YANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQR 575
YA L RW D LR + + K G SW R
Sbjct: 518 YAALDRWTDVAHLRDKMNENGITKICGRSWISR 550
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 208/575 (36%), Positives = 338/575 (58%), Gaps = 13/575 (2%)
Query: 8 TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNP 67
+L+ C TL + IHA ++ GLH+ I ++ + Y + + P
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
+ W + R + + A+ LYV M +GL P S+ LKSCA+ + G IH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
G V LG D +YV T+L+ +Y + G + A KVFD+ ++VVS+ +L+ GY G ++
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMIAGYI 243
AQ LFD+IP KDV+SWN+MISGY++ GN +A LF+ M + N+ ++ T+++
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 244 DSGSILSAREV---FDAMPKRNSVSLI-TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNA 299
SGSI R+V D +++ ++ +I YSK G++++A LF+++ KD++S+N
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIND 359
+I Y + KEAL LF ML+ P+ +T+ S++ AC+ LG ++ RWI +I+
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRS--GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 360 F--GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
GV L T+L+D+YAK G I+ A+++F+ + + L +++AMI+GF ++GRA +
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 418 KLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDL 476
LF +M I P+ +T+ G+L+A +H+G+++ G F +M +D + P ++HYG M+DL
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 515
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY 536
LG +G EA E+I M +P+ +W +LL AC++H NVELGE ++ IK+E + G Y
Sbjct: 516 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 575
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
LLS+IYA+ GRW++ K R + K + K PGCS
Sbjct: 576 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCS 610
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 198/587 (33%), Positives = 333/587 (56%), Gaps = 24/587 (4%)
Query: 1 MVATKLTTLMKK---CSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYV 57
+ +T T+++K C +LNH KQ+HAHIL ++H F+ V++ Y
Sbjct: 7 IASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFL---FNLSVSSSSINLSYA 63
Query: 58 HPILHNLHNP-DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCAR 116
+ ++ +P +S + +R S+ + + Y +++ +G + LK+ ++
Sbjct: 64 LNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSK 123
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
+ G+ +HG + +V+T +D+Y+ G + AR VFDEM+ ++VV+WN++
Sbjct: 124 VSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTM 183
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVIS----WNSMISGYSKAGNMDQANSLFQKMPERN- 231
+ Y + G +DEA LF+++ +V+ +++S + GNM ++++ + E +
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243
Query: 232 ------LASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKL 285
L + TM AG +G + ARE F M RN M++GYSK G +D A +
Sbjct: 244 RMDTHLLTALVTMYAG---AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
FDQ ++KDL+ + MI+ Y ++ P+EAL +F M + PD +++ SVISAC+ LG
Sbjct: 301 FDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS--GIKPDVVSMFSVISACANLG 358
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
L+ +W+ S I+ G+ + + AL+++YAK G +D ++F + +R++V++S+MI
Sbjct: 359 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 418
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLV 464
++G ASDA+ LF +M EN+ PN VT+ G+L +H+GLVEEG F SM D +
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH 524
P ++HYG MVDL GRA L EA E+I +MP N +WG+L+ ACR+H +ELG+ A +
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKR 538
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
++LE D G L+S+IYA RW+D + +R ++ KNV K G S
Sbjct: 539 ILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLS 585
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 345 bits (884), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 202/569 (35%), Positives = 317/569 (55%), Gaps = 45/569 (7%)
Query: 10 MKKCSTLNHAKQIHAHILINGLH---HLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHN 66
+ KC+ LN KQ+HA I+ LH H+ P I + L N + + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL------AVRVFNQVQE 79
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ +IR +Q Q +A ++ +MQR GL + LK+C+ Q L V +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG-QSWLPVVKM 138
Query: 127 -HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
H + LG + +YV AL+D YS+ G +G
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLG----------------------------- 169
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
+ +A LF+K+ +D +SWNSM+ G KAG + A LF +MP+R+L SWNTM+ GY
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARC 229
Query: 246 GSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD--EKDLLSYNAMIAC 303
+ A E+F+ MP+RN+VS TM+ GYSK+GD++ A +FD+M K+++++ +IA
Sbjct: 230 REMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
YA+ KEA L + M+ + D + S+++AC++ G L I S + +
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKF--DAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
+ ++ AL+D+YAK G++ KA+++F+ + K+DLV+++ M++G G++G +AI+LF +M
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRM 407
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGW 482
E I P+ VT+ +L + NHAGL++EG F SM K LVP V+HYG +VDLLGR G
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 483 LDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSI 542
L EA +++ MP +PN +WGALL ACR+HN V++ + + + +KL+ G YSLLS+I
Sbjct: 468 LKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNI 527
Query: 543 YANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
YA W+ +R +K V K G S
Sbjct: 528 YAAAEDWEGVADIRSKMKSMGVEKPSGAS 556
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/470 (38%), Positives = 279/470 (59%), Gaps = 7/470 (1%)
Query: 107 ISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA 166
++ + C R D G + + H + + + L+ + + A ++FDE+
Sbjct: 64 LNKIIARCVRSGDIDGALRV---FHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120
Query: 167 EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQK 226
E + S+N +LS Y++ + ++AQ FD++P KD SWN+MI+GY++ G M++A LF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 227 MPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLF 286
M E+N SWN MI+GYI+ G + A F P R V+ MI GY K+ V+ A +F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 287 DQMD-EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
M K+L+++NAMI+ Y +NS+P++ L+LF ML E + P+ L+S + CS+L
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAML--EEGIRPNSSGLSSALLGCSELS 298
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
L+ R I ++ + D T+L+ +Y K G + A++LF ++K+D+VA++AMI
Sbjct: 299 ALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMIS 358
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLV 464
G+ +G A A+ LF +M+ I P+ +T+ +L A NHAGLV G F SM +D +
Sbjct: 359 GYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH 524
P DHY MVDLLGRAG L+EA +LI +MP +P+A V+G LL ACR+H NVEL E A +
Sbjct: 419 PQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEK 478
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
++L S Y L++IYA+ RW+D ++R +K NV+K PG SW +
Sbjct: 479 LLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIE 528
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 124/258 (48%), Gaps = 15/258 (5%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
N + +W +I + + + + + L+ M G+ P S +SSAL C+ + G
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 305
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
IH V V T+L+ +Y K G++G A K+F+ M +K+VV+WN+++SGY + G+
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN 365
Query: 186 LDEAQHLF----DKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM-----PERNLASWN 236
D+A LF D D I++ +++ + AG ++ + F+ M E +
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYT 425
Query: 237 TMIAGYIDSGSILSAREVFDAMPKRNSVSLI-TMIAGYSKSGDVD----SAHKLFDQMDE 291
M+ +G + A ++ +MP R ++ T++ +V+ +A KL Q++
Sbjct: 426 CMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLL-QLNS 484
Query: 292 KDLLSYNAMIACYAQNSK 309
++ Y + YA ++
Sbjct: 485 QNAAGYVQLANIYASKNR 502
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/570 (33%), Positives = 311/570 (54%), Gaps = 56/570 (9%)
Query: 20 KQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFF 79
KQIHA +L+ GL F+ L+ +++ ++ + + +L P F W +IR +
Sbjct: 38 KQIHARLLVLGLQF--SGFLITKLIHASSSFGDIT-FARQVFDDLPRPQIFPWNAIIRGY 94
Query: 80 SQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCV 139
S+ F +A+ +Y MQ + P S LK+C+ + G +H QV LG+D V
Sbjct: 95 SRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADV 154
Query: 140 YVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK 199
+VQ L+ LY+K +G+AR VF+ + +P +
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLP-----------------------------LPER 185
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNL-ASWNTMIAGYIDSGSILSAREVFDAM 258
++SW +++S Y++ G +A +F +M + ++ W ++ S+L+A +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALV-------SVLNAFTCLQDL 238
Query: 259 PKRNSVS--------------LITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACY 304
+ S+ LI++ Y+K G V +A LFD+M +L+ +NAMI+ Y
Sbjct: 239 KQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGY 298
Query: 305 AQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVL 364
A+N +EA+++F+ M+ + V PD +++ S ISAC+Q+G LE R + ++
Sbjct: 299 AKNGYAREAIDMFHEMINKD--VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 365 DDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQML 424
D +++AL+D++AK GS++ A +F RD+V +SAMI G+G++GRA +AI L+ M
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 425 GENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLD 484
+ PN VT+ G+L A NH+G+V EG+W FN M D+ + P HY ++DLLGRAG LD
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLD 476
Query: 485 EAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYA 544
+AYE+I MP QP VWGALL AC+ H +VELGE A Q ++ G+Y LS++YA
Sbjct: 477 QAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYA 536
Query: 545 NLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
WD ++R+ +K K + K GCSW +
Sbjct: 537 AARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 41/389 (10%)
Query: 9 LMKKCSTLNH---AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L+K CS L+H + +HA + G +F+ + L+ + L + L
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFD--ADVFVQNGLIALYAKCRRLGS-ARTVFEGLP 181
Query: 66 NPDS--FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
P+ SW ++ ++Q G+ +EA+ ++ QM++M + P A+ S L + +QD G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
SIH V +G + + +L +Y+K G V TA+ +FD+M N++ WN+++SGY K
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 184 GDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
G EA +F ++ KDV IS S IS ++ G+++QA S+++ + +
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD-------- 353
Query: 240 AGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNA 299
Y D I SA LI M ++K G V+ A +FD+ ++D++ ++A
Sbjct: 354 --YRDDVFISSA--------------LIDM---FAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIND 359
MI Y + + +EA+ L+ M + VHP+ +T ++ AC+ G + W + + D
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERG--GVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD 452
Query: 360 FGVVLDDHLATALVDLYAKSGSIDKAYEL 388
+ ++DL ++G +D+AYE+
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEV 481
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/431 (40%), Positives = 267/431 (61%), Gaps = 3/431 (0%)
Query: 145 LLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISW 204
LL + K + AR+ FD M ++VVSWN++++GY ++G +DEA+ LFD+ P +DV +W
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSV 264
+M+SGY + +++A LF KMPERN SWN M+AGY+ + A+E+FD MP RN
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
+ TMI GY++ G + A LFD+M ++D +S+ AMIA Y+Q+ EAL LF M +
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
+ ++ + +S +S C+ + LE + + + G + AL+ +Y K GSI++
Sbjct: 405 GRL--NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 385 AYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNH 444
A +LF + +D+V+++ MI G+ +G A++ FE M E + P+ T +L+A +H
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 445 AGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWG 503
GLV++G F +M +D G++P HY MVDLLGRAG L++A+ L+ NMP +P+A +WG
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 504 ALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKN 563
LL A R+H N EL E A +E + G Y LLS++YA+ GRW D KLR+ ++ K
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 564 VIKTPGCSWTQ 574
V K PG SW +
Sbjct: 643 VKKVPGYSWIE 653
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 203/378 (53%), Gaps = 22/378 (5%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+ D W I + + G+ EA+ ++ +M R + IS L++ G
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN--------GEFE 112
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
+ ++ + + ++ Y + ++G AR++F+ M E++V SWN++LSGY + G
Sbjct: 113 LARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
+D+A+ +FD++P K+ +SWN+++S Y + M++A LF+ L SWN ++ G++
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 246 GSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYA 305
I+ AR+ FD+M R+ VS T+I GY++SG +D A +LFD+ +D+ ++ AM++ Y
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 306 QNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD 365
QN +EA ELF+ M PE N LA + +E F V+
Sbjct: 293 QNRMVEEARELFDKM--PERNEVSWNAMLAGYVQG----------ERMEMAKELFDVMPC 340
Query: 366 DHLAT--ALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
+++T ++ YA+ G I +A LF + KRD V+++AMI G+ +G + +A++LF QM
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 424 LGENIGPNLVTYTGILTA 441
E N +++ L+
Sbjct: 401 EREGGRLNRSSFSSALST 418
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 219/432 (50%), Gaps = 47/432 (10%)
Query: 166 AEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQ 225
+ ++ WN +S Y++ G +EA +F ++P +S+N MISGY + G + A LF
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFD 119
Query: 226 KMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKL 285
+MPER+L SWN MI GY+ + ++ ARE+F+ MP+R+ S TM++GY+++G VD A +
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFN----------------YMLKPEI---- 325
FD+M EK+ +S+NA+++ Y QNSK +EA LF ++ K +I
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 326 ------NVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
NV D ++ ++I+ +Q G ++ R + D V D TA+V Y ++
Sbjct: 240 QFFDSMNVR-DVVSWNTIITGYAQSGKIDEAR----QLFDESPVQDVFTWTAMVSGYIQN 294
Query: 380 GSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
+++A ELF + +R+ V+++AM+ G+ R A +LF+ M N+ T+ ++
Sbjct: 295 RMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMI 350
Query: 440 TAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQP-- 497
T Y G + E F+ M V + M+ ++G EA L + M +
Sbjct: 351 TGYAQCGKISEAKNLFDKMPKRDPVS----WAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 498 -NADVWGALLLACRLHNNVELGEIAVQHCIKLESDT---VGYYSLLSSIYANLGRWDDAK 553
N + + L C +ELG+ +K +T VG LL +Y G ++A
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL--MYCKCGSIEEAN 464
Query: 554 KLRMGVKGKNVI 565
L + GK+++
Sbjct: 465 DLFKEMAGKDIV 476
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 19/312 (6%)
Query: 195 KIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREV 254
K D+ WN IS Y + G ++A +F++MP + S+N MI+GY+ +G AR++
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 255 FDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEAL 314
FD MP+R+ VS MI GY ++ ++ A +LF+ M E+D+ S+N M++ YAQN +A
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVD 374
+F+ M PE N ++ +++SA Q +E + ++ +V L+
Sbjct: 178 SVFDRM--PEKN----DVSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLG 227
Query: 375 LYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVT 434
+ K I +A + F + RD+V+++ +I G+ +G+ +A +LF+ E+ ++ T
Sbjct: 228 GFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFT 283
Query: 435 YTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP 494
+T +++ Y +VEE F+ M + V + M+ + ++ A EL MP
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVS----WNAMLAGYVQGERMEMAKELFDVMP 339
Query: 495 TQPNADVWGALL 506
+ N W ++
Sbjct: 340 CR-NVSTWNTMI 350
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + D SW +I +SQ G EA+ L+VQM+R G + SSAL +CA +
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G +HG++ GY+T +V ALL +Y K G + A +F EMA K++VSWN++++G
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484
Query: 180 YLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE 229
Y + G + A F+ + + D + +++S S G +D+ F M +
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/619 (31%), Positives = 330/619 (53%), Gaps = 52/619 (8%)
Query: 3 ATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
A L + +K + + + +HA ++ +G + +FI + L+ + L +
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSN--EIFIQNRLIDAYSKCGSLEDG-RQVFD 79
Query: 63 NLHNPDSFSWGCV-------------------------------IRFFSQKGQFIEAVSL 91
+ + ++W V + F+Q + EA+
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 92 YVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSK 151
+ M + G ++ +S L +C+ + D GV +H + + + VY+ +AL+D+YSK
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 152 MGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD----LDEAQHLFDKIPGKDVISWNSM 207
G+V A++VFDEM ++NVVSWNSL++ + + G LD Q + + D ++ S+
Sbjct: 200 CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASV 259
Query: 208 ISGYS-----KAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN 262
IS + K G + ++ N + Y I AR +FD+MP RN
Sbjct: 260 ISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRN 319
Query: 263 SVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLK 322
++ +MI+GY+ + +A +F +M E++++S+NA+IA Y QN + +EAL LF +LK
Sbjct: 320 VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLF-CLLK 378
Query: 323 PEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVL------DDHLATALVDLY 376
E +V P + A+++ AC+ L +L H+ G D + +L+D+Y
Sbjct: 379 RE-SVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 377 AKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYT 436
K G +++ Y +F + +RD V+++AMI GF NG ++A++LF +ML P+ +T
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMI 497
Query: 437 GILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT 495
G+L+A HAG VEEG F+SM +D G+ PL DHY MVDLLGRAG+L+EA +I MP
Sbjct: 498 GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPM 557
Query: 496 QPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
QP++ +WG+LL AC++H N+ LG+ + +++E G Y LLS++YA LG+W+D +
Sbjct: 558 QPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNV 617
Query: 556 RMGVKGKNVIKTPGCSWTQ 574
R ++ + V K PGCSW +
Sbjct: 618 RKSMRKEGVTKQPGCSWIK 636
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 202/381 (53%), Gaps = 22/381 (5%)
Query: 104 SHAISSALKSCARIQDKLGGVSI---HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARK 160
S + L SC I+ KL + + H V G+ +++Q L+D YSK G + R+
Sbjct: 19 SSPFAKLLDSC--IKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQ 76
Query: 161 VFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQA 220
VFD+M ++N+ +WNS+++G K G LDEA LF +P +D +WNSM+SG+++ ++A
Sbjct: 77 VFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEA 136
Query: 221 NSLFQKM-------PERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSL-ITMIAG 272
F M E + AS + +G D + + P + V + ++
Sbjct: 137 LCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 273 YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
YSK G+V+ A ++FD+M +++++S+N++I C+ QN EAL++F ML E V PD++
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML--ESRVEPDEV 254
Query: 333 TLASVISACSQLGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAYELFHG 391
TLASVISAC+ L ++ + + + + +D L+ A VD+YAK I +A +F
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDS 314
Query: 392 LRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
+ R+++A ++MI G+ + A +F +M N+ V++ ++ Y G EE
Sbjct: 315 MPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAGYTQNGENEEA 370
Query: 452 YWCFNSMKDNGLVPLVDHYGI 472
F +K + P HY
Sbjct: 371 LSLFCLLKRESVCPT--HYSF 389
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/579 (32%), Positives = 316/579 (54%), Gaps = 15/579 (2%)
Query: 4 TKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
++ +++ C T + KQ+H+ + G+ P F + ++ + Y + +
Sbjct: 35 SRFISILGVCKTTDQFKQLHSQSITRGVAP-NPTFQKKLFVFWCSRLGGHVSYAYKLFVK 93
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG- 122
+ PD W +I+ +S+ E V LY+ M + G+ P SH L R L
Sbjct: 94 IPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H V G + +YVQ AL+ +YS G + AR VFD +++V SWN ++SGY +
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNR 213
Query: 183 AGDLDEAQHLFDKIPGKDVISWNSM-----ISGYSKAGNMDQANSLFQKMPE----RNLA 233
+ +E+ L ++ ++++S S+ +S SK + D + + + E +L
Sbjct: 214 MKEYEESIELLVEME-RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKD 293
N ++ Y G + A +F +M R+ +S +++ GY + G++ A FDQM +D
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRD 332
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
+S+ MI Y + E+LE+F M + PD+ T+ SV++AC+ LG LE WI
Sbjct: 333 RISWTIMIDGYLRAGCFNESLEIFREM--QSAGMIPDEFTMVSVLTACAHLGSLEIGEWI 390
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
+++I+ + D + AL+D+Y K G +KA ++FH + +RD ++AM+ G NG+
Sbjct: 391 KTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQG 450
Query: 414 SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHYGI 472
+AIK+F QM +I P+ +TY G+L+A NH+G+V++ F M+ D+ + P + HYG
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDT 532
MVD+LGRAG + EAYE++ MP PN+ VWGALL A RLHN+ + E+A + ++LE D
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDN 570
Query: 533 VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
Y+LL +IYA RW D +++R + + KTPG S
Sbjct: 571 GAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFS 609
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 293/524 (55%), Gaps = 55/524 (10%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D FSW VI ++ G EA+ + M+++ L PT + A+K+C+ + D G H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
Q V GY + ++V +AL+ +YS G L+
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYST-------------------------------CGKLE 128
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGS 247
+A+ +FD+IP ++++SW SMI GY GN A SLF+ + + M ++DS
Sbjct: 129 DARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM---FLDSMG 185
Query: 248 ILSAREVFDAMPKRNSVSLI-----------------TMIAGYSKSGD--VDSAHKLFDQ 288
++S +P + I T++ Y+K G+ V A K+FDQ
Sbjct: 186 LVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQ 245
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
+ +KD +SYN++++ YAQ+ EA E+F ++K ++ V + +TL++V+ A S G L
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKV-VTFNAITLSTVLLAVSHSGALR 304
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
+ I + G+ D + T+++D+Y K G ++ A + F ++ +++ +++AMI G+G
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLV 467
++G A+ A++LF M+ + PN +T+ +L A +HAGL EG+ FN+MK G+ P +
Sbjct: 365 MHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGL 424
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
+HYG MVDLLGRAG+L +AY+LI M +P++ +W +LL ACR+H NVEL EI+V +
Sbjct: 425 EHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFE 484
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
L+S GYY LLS IYA+ GRW D +++RM +K + ++K PG S
Sbjct: 485 LDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFS 528
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 158/339 (46%), Gaps = 54/339 (15%)
Query: 285 LFDQ-MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
LF++ +D+ D+ S+N++IA A++ EAL F+ M K ++++P + + I ACS
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRK--LSLYPTRSSFPCAIKACSS 88
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
L D+ + FG D +++AL+ +Y+ G ++ A ++F + KR++V++++M
Sbjct: 89 LFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 404 IYGFGINGRASDAIKLFEQML-GENIGPN--------LVTYTGILTAYNHAGLVE----- 449
I G+ +NG A DA+ LF+ +L EN + LV+ + GL E
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 450 -------EGYWCFNSMKD------NGLVP--------LVDH----YGIMVDLLGRAGWLD 484
G N++ D G V +VD Y ++ + ++G +
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 485 EAYE----LIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK--LESDTVGYYSL 538
EA+E L+ N NA +LLA + +G+ I+ LE D + S+
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 539 LSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQRVS 577
+ +Y GR + A+K +K KNV SWT ++
Sbjct: 329 I-DMYCKCGRVETARKAFDRMKNKNVR-----SWTAMIA 361
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 333/644 (51%), Gaps = 90/644 (13%)
Query: 8 TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYV---HPILHNL 64
TL + C+ L AK +HA ++++ ++ + I L VN Y L + H H +
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVS--KQIQNVCISAKL---VNLYCYLGNVALARHTFDH-I 112
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLY-VQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
N D ++W +I + + G E + + + M GL P S LK+C + D G
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---G 169
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
IH G+ VYV +L+ LYS+ VG AR +FDEM +++ SWN+++SGY ++
Sbjct: 170 NKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 184 GDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQA----------------------- 220
G+ EA L + + D ++ S++S ++AG+ ++
Sbjct: 230 GNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 221 ------------NSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSV 264
+F +M R+L SWN++I Y + L A +F M + + +
Sbjct: 290 DLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCL 349
Query: 265 SLITM------------------------------------IAGYSKSGDVDSAHKLFDQ 288
+LI++ + Y+K G VDSA +F+
Sbjct: 350 TLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNW 409
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
+ D++S+N +I+ YAQN EA+E++N M + E + ++ T SV+ ACSQ G L
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIM-EEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
+ + G+ LD + T+L D+Y K G ++ A LF+ + + + V ++ +I G
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLV 467
+G A+ LF++ML E + P+ +T+ +L+A +H+GLV+EG WCF M+ D G+ P +
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
HYG MVD+ GRAG L+ A + I +M QP+A +WGALL ACR+H NV+LG+IA +H +
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 648
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+E + VGY+ LLS++YA+ G+W+ ++R GK + KTPG S
Sbjct: 649 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 303/521 (58%), Gaps = 13/521 (2%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCAR 116
+ L D +W VI + + G EA L+ ++ R + + +S L+S
Sbjct: 66 RKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRS--- 122
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
+SI + + V ++D Y++ G + A ++FDEM E+N+VSWNS+
Sbjct: 123 -----KQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSM 177
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
+ ++ G +DEA +LF+++P +DV+SW +M+ G +K G +D+A LF MPERN+ SWN
Sbjct: 178 VKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWN 237
Query: 237 TMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS 296
MI GY + I A ++F MP+R+ S TMI G+ ++ +++ A LFD+M EK+++S
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS 297
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESH 356
+ MI Y +N + +EAL +F+ ML+ + +V P+ T S++SACS L L + I
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLR-DGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 357 INDFGVVLDDHLATALVDLYAKSGSIDKAYELF-HGLR-KRDLVAYSAMIYGFGINGRAS 414
I+ ++ + +AL+++Y+KSG + A ++F +GL +RDL+++++MI + +G
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV-DHYGIM 473
+AI+++ QM P+ VTY +L A +HAGLVE+G F + + +PL +HY +
Sbjct: 417 EAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCL 476
Query: 474 VDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTV 533
VDL GRAG L + I + + +GA+L AC +HN V + + V+ ++ SD
Sbjct: 477 VDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDA 536
Query: 534 GYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G Y L+S+IYA G+ ++A ++RM +K K + K PGCSW +
Sbjct: 537 GTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVK 577
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 192/355 (54%), Gaps = 23/355 (6%)
Query: 159 RKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMD 218
R ++ + V L+ K G + EA+ LFD +P +DV++W +I+GY K G+M
Sbjct: 35 RSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMR 94
Query: 219 QANSLFQKMPER-NLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
+A LF ++ R N+ +W M++GY+ S + A +F MP+RN VS TMI GY++SG
Sbjct: 95 EARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSG 154
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
+D A +LFD+M E++++S+N+M+ Q + EA+ LF M + ++ ++ ++
Sbjct: 155 RIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV------VSWTAM 208
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLAT--ALVDLYAKSGSIDKAYELFHGLRKR 395
+ ++ G ++ R + F + + ++ + A++ YA++ ID+A +LF + +R
Sbjct: 209 VDGLAKNGKVDEARRL------FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCF 455
D +++ MI GF N + A LF++M +N+ +++T ++T Y EE F
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVF 318
Query: 456 NSM-KDNGLVPLVDHY-GIMVDLLGRAGWLD--EAYELIINMPTQPNADVWGALL 506
+ M +D + P V Y I+ AG ++ + ++LI Q N V ALL
Sbjct: 319 SKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 279/506 (55%), Gaps = 35/506 (6%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQR-MGLCPTSHAISSALKSCARIQDKLGGVSI 126
DSF +I+ + + Q+ ++ +LY +++ P + ++ KSC+ G+ +
Sbjct: 41 DSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQL 100
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
H Q+ G+ +YV T ++D+Y+K G +G AR F
Sbjct: 101 HSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAF------------------------ 136
Query: 187 DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPE-RNLASWNTMIAGYIDS 245
D++P + +SW ++ISGY + G +D A+ LF +MP +++ +N M+ G++ S
Sbjct: 137 -------DEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKS 189
Query: 246 GSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYA 305
G + SAR +FD M + ++ TMI GY D+D+A KLFD M E++L+S+N MI Y
Sbjct: 190 GDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYC 249
Query: 306 QNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD 365
QN +P+E + LF M + ++ PD +T+ SV+ A S G L W + +
Sbjct: 250 QNKQPQEGIRLFQEM-QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 366 DHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLG 425
+ TA++D+Y+K G I+KA +F + ++ + +++AMI+G+ +NG A A+ LF M+
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI 368
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDE 485
E P+ +T ++TA NH GLVEEG F+ M++ GL ++HYG MVDLLGRAG L E
Sbjct: 369 EE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKE 427
Query: 486 AYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYAN 545
A +LI NMP +PN + + L AC + ++E E ++ ++LE G Y LL ++YA
Sbjct: 428 AEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAA 487
Query: 546 LGRWDDAKKLRMGVKGKNVIKTPGCS 571
RWDD ++ ++ K GCS
Sbjct: 488 DKRWDDFGMVKNVMRKNQAKKEVGCS 513
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/582 (31%), Positives = 300/582 (51%), Gaps = 80/582 (13%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
W ++ ++ G F ++ L+ +M G+ S+ S KS + ++ GG +HG +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 132 VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG------- 184
G+ V +L+ Y K V +ARKVFDEM E++V+SWNS+++GY+ G
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 185 ------------DLDEAQHLFDKIPGKDVIS--------------------WNSMISGYS 212
DL +F +IS N+++ YS
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 213 KAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP------------- 259
K G++D A ++F++M +R++ S+ +MIAGY G A ++F+ M
Sbjct: 343 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 402
Query: 260 ---------------------KRNSVSLITMIAG-----YSKSGDVDSAHKLFDQMDEKD 293
K N + ++ Y+K G + A +F +M KD
Sbjct: 403 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 462
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
++S+N +I Y++N EAL LFN +L+ E PD+ T+A V+ AC+ L + R I
Sbjct: 463 IISWNTIIGGYSKNCYANEALSLFNLLLE-EKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
+I G D H+A +LVD+YAK G++ A+ LF + +DLV+++ MI G+G++G
Sbjct: 522 HGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG 581
Query: 414 SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHYGI 472
+AI LF QM I + +++ +L A +H+GLV+EG+ FN M+ + + P V+HY
Sbjct: 582 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 641
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDT 532
+VD+L R G L +AY I NMP P+A +WGALL CR+H++V+L E + +LE +
Sbjct: 642 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 701
Query: 533 VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
GYY L+++IYA +W+ K+LR + + + K PGCSW +
Sbjct: 702 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/548 (23%), Positives = 241/548 (43%), Gaps = 92/548 (16%)
Query: 76 IRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY 135
+R F + G AV L + + P + + S L+ CA + G + + G+
Sbjct: 68 LRRFCESGNLENAVKLLCVSGKWDIDPRT--LCSVLQLCADSKSLKDGKEVDNFIRGNGF 125
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK 195
+ + L +Y+ GD+ A +VFDE+ + + WN L++ K+GD + LF K
Sbjct: 126 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKK 185
Query: 196 I--PGKDVISW-------------------------------------NSMISGYSKAGN 216
+ G ++ S+ NS+++ Y K
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 217 MDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM----PKRNSVSLITMIAG 272
+D A +F +M ER++ SWN++I GY+ +G VF M + + +++++ AG
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 273 -----------------------------------YSKSGDVDSAHKLFDQMDEKDLLSY 297
YSK GD+DSA +F +M ++ ++SY
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
+MIA YA+ EA++LF M E + PD T+ +V++ C++ L+ + + I
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEM--EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
+ + D ++ AL+D+YAK GS+ +A +F +R +D+++++ +I G+ N A++A+
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEAL 483
Query: 418 KLFEQMLGE-NIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDL 476
LF +L E P+ T +L A ++G + NG +VD+
Sbjct: 484 SLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDM 543
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV-----QHCIKLESD 531
+ G L A+ L ++ ++ W ++ +H G+ A+ +E+D
Sbjct: 544 YAKCGALLLAHMLFDDIASKDLVS-WTVMIAGYGMHG---FGKEAIALFNQMRQAGIEAD 599
Query: 532 TVGYYSLL 539
+ + SLL
Sbjct: 600 EISFVSLL 607
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 220/503 (43%), Gaps = 97/503 (19%)
Query: 15 TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGC 74
+++ +Q+H IL +G + + ++ + + N + S + + D SW
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDS--ARKVFDEMTERDVISWNS 266
Query: 75 VIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLG 134
+I + G + +S++VQM G+ I S CA +L +S+ VH +G
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA--DSRL--ISLGRAVHSIG 322
Query: 135 YDTCVYVQ----TALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQ 190
C + LLD+YSK GD+ +A+ VF EM++++VVS+ S+++GY + G EA
Sbjct: 323 VKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 191 HLFDKI--------------------------PGKDVISW-------------NSMISGY 211
LF+++ GK V W N+++ Y
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 212 SKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM-------PKRNSV 264
+K G+M +A +F +M +++ SWNT+I GY + A +F+ + P +V
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 265 SLI---------------------------------TMIAGYSKSGDVDSAHKLFDQMDE 291
+ + +++ Y+K G + AH LFD +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHW 350
KDL+S+ MIA Y + KEA+ LFN M + + D+++ S++ ACS G + E W
Sbjct: 563 KDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA--GIEADEISFVSLLYACSHSGLVDEGW 620
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGI 409
R+ ++ + +VD+ A++G + KAY + D + A++ G I
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 410 NGRASDAIKLFEQMLG---ENIG 429
+ A K+ E++ EN G
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTG 703
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 253/423 (59%), Gaps = 3/423 (0%)
Query: 153 GDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYS 212
G + ARK++D M K+VV+ +++ G + G +DEA+ +FD++ ++V++W +MI+GY
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 213 KAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAG 272
+ +D A LF+ MPE+ SW +M+ GY SG I A E F+ MP + ++ MI G
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 273 YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
+ + G++ A ++FD M+++D ++ MI Y + EAL+LF M K V P
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ--GVRPSFP 332
Query: 333 TLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
+L S++S C+ L L++ R + +H+ D ++A+ L+ +Y K G + KA +F
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
+D++ ++++I G+ +G +A+K+F +M PN VT ILTA ++AG +EEG
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452
Query: 453 WCFNSMKDNGLV-PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRL 511
F SM+ V P V+HY VD+LGRAG +D+A ELI +M +P+A VWGALL AC+
Sbjct: 453 EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKT 512
Query: 512 HNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
H+ ++L E+A + + E D G Y LLSSI A+ +W D +R ++ NV K PGCS
Sbjct: 513 HSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCS 572
Query: 572 WTQ 574
W +
Sbjct: 573 WIE 575
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 165/308 (53%), Gaps = 45/308 (14%)
Query: 158 ARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNM 217
AR++FDEM+E+NVVSWN L+SGY+K + EA+++F+ +P ++V+SW +M+ GY + G +
Sbjct: 67 ARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMV 126
Query: 218 DQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
+A SLF +MPERN SW M G ID G I AR+++D MP ++ V+ MI G + G
Sbjct: 127 GEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREG 186
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
VD A +FD+M E++++++ MI Y QN++ A +LF M P+K ++
Sbjct: 187 RVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM--------PEKTEVS-- 236
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
W T+++ Y SG I+ A E F + + +
Sbjct: 237 ------------W-------------------TSMLLGYTLSGRIEDAEEFFEVMPMKPV 265
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
+A +AMI GFG G S A ++F+ M + T+ G++ AY G E F
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNA----TWRGMIKAYERKGFELEALDLFAQ 321
Query: 458 MKDNGLVP 465
M+ G+ P
Sbjct: 322 MQKQGVRP 329
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 194/395 (49%), Gaps = 26/395 (6%)
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
+S + G ++EA+ FD + K + SWNS++SGY G +A LF +M ERN+ SWN
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 237 TMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS 296
+++GYI + I+ AR VF+ MP+RN VS M+ GY + G V A LF +M E++ +S
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS--VISACSQLGDLEHWRWIE 354
+ M + + +A +L++ M P K +AS +I + G ++ R I
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMM--------PVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRAS 414
+ + VV T ++ Y ++ +D A +LF + ++ V++++M+ G+ ++GR
Sbjct: 196 DEMRERNVV----TWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIE 251
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMV 474
DA + FE M + P ++ ++ + G + + F+ M+D + M+
Sbjct: 252 DAEEFFEVM---PMKP-VIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT----WRGMI 303
Query: 475 DLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLACRLHNNVELGEIAVQHCIKLE-S 530
R G+ EA +L M Q P+ ++L C +++ G H ++ +
Sbjct: 304 KAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFD 363
Query: 531 DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI 565
D V S+L ++Y G AK + K++I
Sbjct: 364 DDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDII 398
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 139/293 (47%), Gaps = 39/293 (13%)
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
+ + D+ +W +I+ + +KG +EA+ L+ QMQ+ G+ P+ ++ S L CA + G
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYG 350
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
+H + +D VYV + L+ +Y K G++ A+ VFD + K+++ WNS++SGY
Sbjct: 351 RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH 410
Query: 184 GDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
G +EA +F ++P + ++ ++++ S AG +++ +F+ M +
Sbjct: 411 GLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESK--------- 461
Query: 240 AGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK-DLLSYN 298
F P S + G ++G VD A +L + M K D +
Sbjct: 462 ---------------FCVTPTVEHYSCTVDMLG--RAGQVDKAMELIESMTIKPDATVWG 504
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDK----MTLASVISACSQLGDL 347
A++ +S+ L+L K PD + L+S+ ++ S+ GD+
Sbjct: 505 ALLGACKTHSR----LDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDV 553
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 189/580 (32%), Positives = 308/580 (53%), Gaps = 47/580 (8%)
Query: 5 KLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
++ TL+ T+NH KQIH ++ + LHH F+ ++LL ++ + Y + + +
Sbjct: 15 QIKTLISVACTVNHLKQIHVSLINHHLHH--DTFLVNLLLKRTLFFRQ-TKYSYLLFSHT 71
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
P+ F + +I F F E + L++ +++ GL LK+C R + G+
Sbjct: 72 QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGI 131
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
+H V G++ V T+LL +YS +G
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSG-------------------------------SG 160
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA---- 240
L++A LFD+IP + V++W ++ SGY+ +G +A LF+KM E + + I
Sbjct: 161 RLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLS 220
Query: 241 -----GYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
G +DSG + + + + ++NS T++ Y+K G ++ A +FD M EKD++
Sbjct: 221 ACVHVGDLDSGEWI-VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV 279
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
+++ MI YA NS PKE +ELF ML+ N+ PD+ ++ +S+C+ LG L+ W S
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQE--NLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
I+ + + +A AL+D+YAK G++ + +E+F ++++D+V +A I G NG
Sbjct: 338 LIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKL 397
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMV 474
+ +F Q I P+ T+ G+L HAGL+++G FN++ L V+HYG MV
Sbjct: 398 SFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMV 457
Query: 475 DLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVG 534
DL GRAG LD+AY LI +MP +PNA VWGALL CRL + +L E ++ I LE G
Sbjct: 458 DLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAG 517
Query: 535 YYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
Y LS+IY+ GRWD+A ++R + K + K PG SW +
Sbjct: 518 NYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIE 557
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 176/461 (38%), Positives = 266/461 (57%), Gaps = 16/461 (3%)
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDV--GTARKVFDEMAEKNVVSWNSLLSGYLKA 183
IHG V G D Y+ T L+ +K+G AR+V + + +N W +++ GY
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIE 127
Query: 184 GDLDEAQHLFDKIPGKDVISWNSMISGYSKA-GNMDQAN-------SLFQKMPERNLASW 235
G DEA ++ + +++ + S KA G M N F+ +
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVG 187
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
NTMI Y+ SI AR+VFD MP+R+ +S +IA Y++ G+++ A +LF+ + KD++
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
++ AM+ +AQN+KP+EALE F+ M K I D++T+A ISAC+QLG ++
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRA--DEVTVAGYISACAQLGASKYADRAVQ 305
Query: 356 HINDFGVVLDDH--LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
G DH + +AL+D+Y+K G++++A +F + +++ YS+MI G +GRA
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 414 SDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYG 471
+A+ LF M+ + I PN VT+ G L A +H+GLV++G F+SM G+ P DHY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 472 IMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD 531
MVDLLGR G L EA ELI M +P+ VWGALL ACR+HNN E+ EIA +H +LE D
Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485
Query: 532 TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+G Y LLS++YA+ G W ++R +K K + KTP SW
Sbjct: 486 IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSW 526
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 212/400 (53%), Gaps = 15/400 (3%)
Query: 1 MVATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYK-PLSHYVHP 59
++ + L + + C LN KQIH H+L GL + +I L+ + P+ Y
Sbjct: 47 LLVSSLISKLDDCINLNQIKQIHGHVLRKGLD--QSCYILTKLIRTLTKLGVPMDPYARR 104
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
++ + + F W VIR ++ +G+F EA+++Y M++ + P S S+ LK+C ++D
Sbjct: 105 VIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD 164
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G H Q L VYV ++D+Y K + ARKVFDEM E++V+SW L++
Sbjct: 165 LNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
Y + G+++ A LF+ +P KD+++W +M++G+++ +A F +M + + + +
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 240 AGYIDSGSILSAREVFDAM----------PKRNSVSLITMIAGYSKSGDVDSAHKLFDQM 289
AGYI + + L A + D P + V +I YSK G+V+ A +F M
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
+ K++ +Y++MI A + + +EAL LF+YM+ + + P+ +T + ACS G ++
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVT-QTEIKPNTVTFVGALMACSHSGLVDQ 403
Query: 350 WRWI-ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
R + +S FGV T +VDL ++G + +A EL
Sbjct: 404 GRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALEL 443
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 325/590 (55%), Gaps = 31/590 (5%)
Query: 6 LTTLMK---KCSTLNHAKQIHAH-ILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPIL 61
+ TL+K + + + AKQ+HA I L H + I ++ L +
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLF----- 62
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
L +P +W VIR F+ + F +A++ +V+M+ G CP + S LKSC + D
Sbjct: 63 KTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLR 122
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSK---MGDVGTARKVFDEMAEKNVVSWNSLLS 178
G S+HG + LG D +Y AL+++Y+K MG + VFDEM ++ S + +
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 179 GY--LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM------PER 230
+ +D + +F+ +P KDV+S+N++I+GY+++G + A + ++M P+
Sbjct: 183 AETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDS 242
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKL 285
L+S + + Y+D ++ +E+ + ++ S + +++ Y+KS ++ + ++
Sbjct: 243 FTLSSVLPIFSEYVD---VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
F ++ +D +S+N+++A Y QN + EAL LF M+ + V P + +SVI AC+ L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK--VKPGAVAFSSVIPACAHLA 357
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
L + + ++ G + +A+ALVD+Y+K G+I A ++F + D V+++A+I
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLV 464
G ++G +A+ LFE+M + + PN V + +LTA +H GLV+E + FNSM K GL
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH 524
++HY + DLLGRAG L+EAY I M +P VW LL +C +H N+EL E +
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
++S+ +G Y L+ ++YA+ GRW + KLR+ ++ K + K P CSW +
Sbjct: 538 IFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 325/602 (53%), Gaps = 53/602 (8%)
Query: 21 QIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFS 80
Q HA IL +G + +I L+ +NY + +L ++ +P +S+ +I +
Sbjct: 36 QAHARILKSGAQN--DGYISAKLIASYSNYNCFND-ADLVLQSIPDPTIYSFSSLIYALT 92
Query: 81 QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVY 140
+ F +++ ++ +M GL P SH + + K CA + G IH V G D +
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 141 VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK- 199
VQ ++ +Y + G +G ARKVFD M++K+VV+ ++LL Y + G L+E + ++
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 200 ---DVISWNSMISGYSKAGNMDQANSLFQKM------PER-------------NLASWNT 237
+++SWN ++SG++++G +A +FQK+ P++ + +
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 238 MIAGYIDSGSILSAREVFDAMPKRNSVS-----LITM---------------IAGYSKSG 277
+I GY+ +L + V AM S +I++ I G S++G
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 278 DVDSAHKLFD----QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
VD A ++F+ Q E +++S+ ++IA AQN K EALELF M V P+ +T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM--QVAGVKPNHVT 390
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+ S++ AC + L H R ++ + H+ +AL+D+YAK G I+ + +F+ +
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
++LV +++++ GF ++G+A + + +FE ++ + P+ +++T +L+A GL +EG+
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 454 CFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLH 512
F M + G+ P ++HY MV+LLGRAG L EAY+LI MP +P++ VWGALL +CRL
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 513 NNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
NNV+L EIA + LE + G Y LLS+IYA G W + +R ++ + K PGCSW
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 573 TQ 574
Q
Sbjct: 631 IQ 632
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/463 (35%), Positives = 269/463 (58%), Gaps = 31/463 (6%)
Query: 143 TALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVI 202
TAL+ Y G V A +F +M EKN VSW +L G+L+ G +D+A L++ IP KD I
Sbjct: 114 TALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNI 173
Query: 203 SWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN 262
+ SMI G K G +D+A +F +M ER++ +W TM+ GY + + AR++FD MP++
Sbjct: 174 ARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKT 233
Query: 263 SVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFN---- 318
VS +M+ GY ++G ++ A +LF+ M K +++ NAMI+ Q + +A +F+
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 319 -------------------------YMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
++L + V P TL S++S C+ L L H + +
Sbjct: 294 RNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
+ + +D ++A+ L+ +Y K G + K+ +F +D++ ++++I G+ +G
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 414 SDAIKLFEQM-LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYG 471
+A+K+F +M L + PN VT+ L+A ++AG+VEEG + SM+ G+ P+ HY
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 472 IMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD 531
MVD+LGRAG +EA E+I +M +P+A VWG+LL ACR H+ +++ E + I++E +
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPE 533
Query: 532 TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G Y LLS++YA+ GRW D +LR +K + V K+PGCSWT+
Sbjct: 534 NSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTE 576
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 168/308 (54%), Gaps = 45/308 (14%)
Query: 158 ARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNM 217
ARK+FDEM ++N++SWN L+SGY+K G++DEA+ +FD +P ++V+SW +++ GY G +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 218 DQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
D A SLF KMPE+N SW M+ G++ G I A ++++ +P +++++ +MI G K G
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
VD A ++FD+M E+ ++++ M+ Y QN++ +A ++F+ M P+K ++
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM--------PEKTEVS-- 236
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
W T+++ Y ++G I+ A ELF + + +
Sbjct: 237 ------------W-------------------TSMLMGYVQNGRIEDAEELFEVMPVKPV 265
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
+A +AMI G G G + A ++F+ M N ++ ++ + G E F
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDA----SWQTVIKIHERNGFELEALDLFIL 321
Query: 458 MKDNGLVP 465
M+ G+ P
Sbjct: 322 MQKQGVRP 329
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 215/437 (49%), Gaps = 55/437 (12%)
Query: 135 YDTCVYVQTALLDL--YSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHL 192
Y T + TA + + S++G + ARK+FD K++ SWNS+++GY +A+ L
Sbjct: 11 YSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKL 70
Query: 193 FDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAR 252
FD++P +++ISWN ++SGY K G +D+A +F MPERN+ SW ++ GY+ +G + A
Sbjct: 71 FDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAE 130
Query: 253 EVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKE 312
+F MP++N VS M+ G+ + G +D A KL++ + +KD ++ +MI + + E
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 313 ALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATAL 372
A E+F D+M+ SVI+ W T +
Sbjct: 191 AREIF------------DEMSERSVIT----------W-------------------TTM 209
Query: 373 VDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNL 432
V Y ++ +D A ++F + ++ V++++M+ G+ NGR DA +LFE M + P +
Sbjct: 210 VTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM---PVKP-V 265
Query: 433 VTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIIN 492
+ +++ G + + F+SMK+ + ++ + R G+ EA +L I
Sbjct: 266 IACNAMISGLGQKGEIAKARRVFDSMKERNDA----SWQTVIKIHERNGFELEALDLFIL 321
Query: 493 MPTQ---PNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY-SLLSSIYANLGR 548
M Q P ++L C ++ G+ ++ + D Y S+L ++Y G
Sbjct: 322 MQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGE 381
Query: 549 WDDAKKLRMGVKGKNVI 565
+K + K++I
Sbjct: 382 LVKSKLIFDRFPSKDII 398
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 10/209 (4%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ ++ + SW VI+ + G +EA+ L++ MQ+ G+ PT + S L CA +
Sbjct: 287 VFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLAS 346
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G +H Q+ +D VYV + L+ +Y K G++ ++ +FD K+++ WNS++SG
Sbjct: 347 LHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISG 406
Query: 180 YLKAGDLDEAQHLFDKIP-----GKDVISWNSMISGYSKAGNMDQANSLFQKMP-----E 229
Y G +EA +F ++P + +++ + +S S AG +++ +++ M +
Sbjct: 407 YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVK 466
Query: 230 RNLASWNTMIAGYIDSGSILSAREVFDAM 258
A + M+ +G A E+ D+M
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSM 495
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 169/499 (33%), Positives = 295/499 (59%), Gaps = 13/499 (2%)
Query: 82 KGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG-GVSIHGQVHVLGYDTCVY 140
+G I+A+ LY ++R G+ + L++CA + ++ G +H + G + V
Sbjct: 24 RGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESIKFGVCSDVM 82
Query: 141 VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP-GK 199
V ++L+ +Y K G V +ARKVFDEM E+NV +WN+++ GY+ GD A LF++I +
Sbjct: 83 VGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 142
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPE--RNLASWNTMIAGYIDSGSILSAREVFDA 257
+ ++W MI GY K +++A LF++MP +N+ +W+ M+ Y+++ + AR+ F+
Sbjct: 143 NTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 258 MPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELF 317
+P++N+ M++GY + GDV A +F ++ +DL+ +N +IA YAQN +A++ F
Sbjct: 203 IPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAF 262
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
+ ++ E PD +T++S++SAC+Q G L+ R + S IN G+ L+ ++ AL+D+YA
Sbjct: 263 -FNMQGE-GYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 378 KSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTG 437
K G ++ A +F + R + ++MI I+G+ +A+++F M ++ P+ +T+
Sbjct: 321 KCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIA 380
Query: 438 ILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQP 497
+LTA H G + EG F+ MK + P V H+G ++ LLGR+G L EAY L+ M +P
Sbjct: 381 VLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKP 440
Query: 498 NADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYS-----LLSSIYANLGRWDDA 552
N V GALL AC++H + E+ E V I+ YS +S++YA+ RW A
Sbjct: 441 NDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITNSYSENHLASISNLYAHTERWQTA 499
Query: 553 KKLRMGVKGKNVIKTPGCS 571
+ LR+ ++ + + K+PG S
Sbjct: 500 EALRVEMEKRGLEKSPGLS 518
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 137/347 (39%), Gaps = 64/347 (18%)
Query: 55 HYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSC 114
H I + + D W +I ++Q G +A+ + MQ G P + +SS L +C
Sbjct: 225 HEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSAC 284
Query: 115 ARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
A+ G +H ++ G + +V AL+D+Y+K GD+ A VF+ ++ ++V N
Sbjct: 285 AQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCN 344
Query: 175 SLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS 234
S++S G EA +F + D+ P+ +
Sbjct: 345 SMISCLAIHGKGKEALEMFSTMESLDL-------------------------KPDE--IT 377
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
+ ++ + G ++ ++F M K+ DV K F
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEM----------------KTQDVKPNVKHF-------- 413
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+I ++ K KEA Y L E++V P+ L +++ AC D E +
Sbjct: 414 ---GCLIHLLGRSGKLKEA-----YRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVM 465
Query: 355 SHINDFGVVL----DDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
I G + ++HLA+ + +LYA + A L + KR L
Sbjct: 466 KIIETAGSITNSYSENHLAS-ISNLYAHTERWQTAEALRVEMEKRGL 511
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 301/556 (54%), Gaps = 46/556 (8%)
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
L DS SW +I + GQ+ +A+ + M + G+ PT +++ L S A +
Sbjct: 105 QLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMET 164
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H + LG V V +LL++Y+K GD A+ VFD M +++ SWN++++ +++
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ 224
Query: 183 AGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM-------PER-NLAS 234
G +D A F+++ +D+++WNSMISG+++ G +A +F KM P+R LAS
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 235 --------------------------------WNTMIAGYIDSGSILSAREVFDAMPKRN 262
N +I+ Y G + +AR + + ++
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 263 --SVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM 320
++ GY K GD++ A +F + ++D++++ AMI Y Q+ EA+ LF M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 321 LKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSG 380
+ P+ TLA+++S S L L H + I G + ++ AL+ +YAK+G
Sbjct: 405 VGG--GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 381 SIDKAYELFHGLR-KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
+I A F +R +RD V++++MI +G A +A++LFE ML E + P+ +TY G+
Sbjct: 463 NITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 440 TAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN 498
+A HAGLV +G F+ MKD + ++P + HY MVDL GRAG L EA E I MP +P+
Sbjct: 523 SACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPD 582
Query: 499 ADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMG 558
WG+LL ACR+H N++LG++A + + LE + G YS L+++Y+ G+W++A K+R
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 559 VKGKNVIKTPGCSWTQ 574
+K V K G SW +
Sbjct: 643 MKDGRVKKEQGFSWIE 658
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 229/495 (46%), Gaps = 81/495 (16%)
Query: 102 PTSHAISSALKSCARIQDKLGGVS--------IHGQVHVLGYDTCVYVQTALLDLYSKMG 153
P ++S+ L+ C + K S +H +V G VY+ L+++YSK G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 154 DVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSK 213
ARK+FDEM + SWN++LS Y K GD+D FD++P +D +SW +MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 214 AGNMDQA--------------------------------------NSLFQKMPER-NLAS 234
G +A +S K+ R N++
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
N+++ Y G + A+ VFD M R+ S MIA + + G +D A F+QM E+D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+++N+MI+ + Q AL++F+ ML+ + + PD+ TLASV+SAC+ L L + I
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSL-LSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 355 SHI-----NDFGVVLDDHLA----------------------------TALVDLYAKSGS 381
SHI + G+VL+ ++ TAL+D Y K G
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 382 IDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
+++A +F L+ RD+VA++AMI G+ +G +AI LF M+G PN T +L+
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 442 YNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADV 501
+ + G S +G + V ++ + +AG + A + + +
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 502 WGALLLACRLHNNVE 516
W ++++A H + E
Sbjct: 483 WTSMIIALAQHGHAE 497
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 157/337 (46%), Gaps = 25/337 (7%)
Query: 1 MVATKLTTLMKKCSTLNHAKQIHAHILINGL--HHLEPLFIHHILLWDVNNYKPLSHYVH 58
+V L ++ +C + A+++ L L +I L D+N K
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN------ 368
Query: 59 PILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQ 118
I +L + D +W +I + Q G + EA++L+ M G P S+ +++ L + +
Sbjct: 369 -IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 119 DKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM-AEKNVVSWNSLL 177
G IHG G V V AL+ +Y+K G++ +A + FD + E++ VSW S++
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 178 SGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERN-- 231
+ G +EA LF+ + + D I++ + S + AG ++Q F M + +
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 232 ---LASWNTMIAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVD----SAH 283
L+ + M+ + +G + A+E + MP + + V+ ++++ ++D +A
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAE 607
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM 320
+L ++ ++ +Y+A+ Y+ K +EA ++ M
Sbjct: 608 RLL-LLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 313/578 (54%), Gaps = 56/578 (9%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
L+KKC ++N +QI A +L++ + L + L D N Y + P+
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFN-------YSSFLFSVTEEPN 95
Query: 69 SFSWGCVIRFFSQKGQFIEA-VSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
+S+ +IR + EA +SLY +M+ GL P + +CA++++ G S+H
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
+ +G + V++ +L+ +Y+K G VG
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGY------------------------------ 185
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGYI 243
A+ LFD+I +D +SWNSMISGYS+AG A LF+KM E + +M+
Sbjct: 186 -ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACS 244
Query: 244 DSGSILSAREVFDAMPKRNSVSLIT-----MIAGYSKSGDVDSAHKLFDQMDEKDLLSYN 298
G + + R + + M + L T +I+ Y K GD+DSA ++F+QM +KD +++
Sbjct: 245 HLGDLRTGR-LLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWT 303
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
AMI Y+QN K EA +LF M K V PD TL++V+SAC +G LE + IE+H +
Sbjct: 304 AMITVYSQNGKSSEAFKLFFEMEK--TGVSPDAGTLSTVLSACGSVGALELGKQIETHAS 361
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIK 418
+ + + ++AT LVD+Y K G +++A +F + ++ ++AMI + G A +A+
Sbjct: 362 ELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALL 421
Query: 419 LFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLL 477
LF++M ++ P+ +T+ G+L+A HAGLV +G F+ M GLVP ++HY ++DLL
Sbjct: 422 LFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLL 478
Query: 478 GRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKL-ESDTVGYY 536
RAG LDEA+E + P +P+ + A+L AC +V + E A++ +++ E+ G Y
Sbjct: 479 SRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNY 538
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+ S++ A++ WD++ K+R ++ + V+KTPGCSW +
Sbjct: 539 VISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 576
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 187/377 (49%), Gaps = 12/377 (3%)
Query: 141 VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKD 200
++ L L K V R++ +M +V N L+ ++ GD + + LF +
Sbjct: 36 LERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 95
Query: 201 VISWNSMISGYSKAGNMDQAN-SLFQKMPERNLA----SWNTMIAGYIDSGSILSAREVF 255
S+N MI G + N +A SL+++M L ++N + I R V
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 256 DAMPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPK 311
++ K R+ ++I Y+K G V A KLFD++ E+D +S+N+MI+ Y++ K
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATA 371
+A++LF M E PD+ TL S++ ACS LGDL R +E + L L +
Sbjct: 216 DAMDLFRKM--EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSK 273
Query: 372 LVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPN 431
L+ +Y K G +D A +F+ + K+D VA++AMI + NG++S+A KLF +M + P+
Sbjct: 274 LISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPD 333
Query: 432 LVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELII 491
T + +L+A G +E G + L + +VD+ G+ G ++EA +
Sbjct: 334 AGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFE 393
Query: 492 NMPTQPNADVWGALLLA 508
MP + N W A++ A
Sbjct: 394 AMPVK-NEATWNAMITA 409
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 328/647 (50%), Gaps = 88/647 (13%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHI--LLWDVNNYKPLSHYVHPILHNLHN 66
L+++CS+L +QI + NGL+ E F + L + + PI L+
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQ-EHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN- 100
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
+ +++ F++ +A+ +V+M+ + P + + LK C + G I
Sbjct: 101 ---VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG-- 184
HG + G+ ++ T L ++Y+K V ARKVFD M E+++VSWN++++GY + G
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 185 --DLDEAQHLFDK------------IP----------GKDVISW-------------NSM 207
L+ + + ++ +P GK++ + ++
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM------PK- 260
+ Y+K G+++ A LF M ERN+ SWN+MI Y+ + + A +F M P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 261 --------------------------------RNSVSLITMIAGYSKSGDVDSAHKLFDQ 288
RN + ++I+ Y K +VD+A +F +
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
+ + L+S+NAMI +AQN +P +AL F+ M V PD T SVI+A ++L
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR--TVKPDTFTYVSVITAIAELSITH 455
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
H +WI + + + + TALVD+YAK G+I A +F + +R + ++AMI G+G
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPL-V 467
+G A++LFE+M I PN VT+ +++A +H+GLVE G CF MK+N + L +
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
DHYG MVDLLGRAG L+EA++ I+ MP +P +V+GA+L AC++H NV E A + +
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
L D GY+ LL++IY W+ ++R+ + + + KTPGCS +
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVE 682
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 253/435 (58%), Gaps = 34/435 (7%)
Query: 142 QTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV 201
Q L + MG + +A KVF EM EKNVV
Sbjct: 31 QMFLFGMLCLMGVIASANKVFCEMVEKNVVL----------------------------- 61
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR 261
W SMI+GY ++ A F PER++ WNTMI+GYI+ G++L AR +FD MP R
Sbjct: 62 --WTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCR 119
Query: 262 NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYML 321
+ +S T++ GY+ GD+++ ++FD M E+++ S+N +I YAQN + E L F M+
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 322 KPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGV-VLDDHLATALVDLYAKSG 380
E +V P+ T+ V+SAC++LG + +W+ + G +D ++ AL+D+Y K G
Sbjct: 180 D-EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCG 238
Query: 381 SIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
+I+ A E+F G+++RDL++++ MI G +G ++A+ LF +M I P+ VT+ G+L
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 441 AYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNA 499
A H GLVE+G FNSM D ++P ++H G +VDLL RAG+L +A E I MP + +A
Sbjct: 299 ACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADA 358
Query: 500 DVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGV 559
+W LL A +++ V++GE+A++ IKLE + +LS+IY + GR+DDA +L++ +
Sbjct: 359 VIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAM 418
Query: 560 KGKNVIKTPGCSWTQ 574
+ K G SW +
Sbjct: 419 RDTGFKKEAGVSWIE 433
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 187/387 (48%), Gaps = 48/387 (12%)
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
+G ++ +V + V + T++++ Y D+ +AR+ FD E+++V WN+++SGY
Sbjct: 41 MGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA 240
++ G++ EA+ LFD++P +DV+SWN+++ GY+ G+M+ +F MPERN+ SWN +I
Sbjct: 101 IEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIK 160
Query: 241 GYIDSGSILSAREVFDAM-------PKRNSVSLI-------------------------- 267
GY +G + F M P +++L+
Sbjct: 161 GYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYN 220
Query: 268 --------TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNY 319
+I Y K G ++ A ++F + +DL+S+N MI A + EAL LF+
Sbjct: 221 KVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHE 280
Query: 320 MLKPEINVHPDKMTLASVISACSQLGDLEH-WRWIESHINDFGVVLDDHLATALVDLYAK 378
M I+ PDK+T V+ AC +G +E + S DF ++ + +VDL ++
Sbjct: 281 MKNSGIS--PDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSR 338
Query: 379 SGSIDKAYELFHGLR-KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGP-NLVTYT 436
+G + +A E + + K D V ++ ++ + + E+++ + P N +
Sbjct: 339 AGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELI--KLEPRNPANFV 396
Query: 437 GILTAYNHAGLVEEGYWCFNSMKDNGL 463
+ Y AG ++ +M+D G
Sbjct: 397 MLSNIYGDAGRFDDAARLKVAMRDTGF 423
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 50/274 (18%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMG-LCPTSHAISSALKSCARIQ 118
+ ++ + FSW +I+ ++Q G+ E + + +M G + P ++ L +CA++
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLG 202
Query: 119 DKLGGVSIHGQVHVLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G +H LGY+ V V+ AL+D+Y K G + A +VF + ++++SWN+++
Sbjct: 203 AFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 178 SGYLKAGDLDEAQHLF----------DKIPGKDVIS--------------WNSMISGY-- 211
+G G EA +LF DK+ V+ +NSM + +
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 212 --------------SKAGNMDQANSLFQKMPER-NLASWNTMIAG-----YIDSGSILSA 251
S+AG + QA KMP + + W T++ +D G + A
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEV--A 380
Query: 252 REVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKL 285
E + RN + + + Y +G D A +L
Sbjct: 381 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARL 414
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 298/541 (55%), Gaps = 52/541 (9%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV----SI 126
S+ +I+ ++Q Q+ EA+ L+ +M+ +G+ +++ + +C+ LGG+ +
Sbjct: 140 SYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH----LGGIWDCRML 195
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
L + V+V T LL +Y + ARK+FDEM E+N+V+WN +L+GY KAG +
Sbjct: 196 QSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLI 255
Query: 187 DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM------------------P 228
++A+ LFD+I KD++SW +MI G + +D+A + +M
Sbjct: 256 EQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSAS 315
Query: 229 ERNLASWN---------------------TMIAGYIDSGSILSAREVFDAMPKRNSVSLI 267
R++ S T+I Y S I A + F+A K + S
Sbjct: 316 ARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRN 375
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV 327
+IAG+ K+G V+ A ++FDQ +KD+ S+NAMI+ YAQ+ P+ AL LF M+ V
Sbjct: 376 ALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS-QV 434
Query: 328 HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
PD +T+ SV SA S LG LE + ++N + +D+L A++D+YAK GSI+ A
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 388 LFH---GLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNH 444
+FH + + ++A+I G +G A A+ L+ + I PN +T+ G+L+A H
Sbjct: 495 IFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCH 554
Query: 445 AGLVEEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWG 503
AGLVE G F SMK D+G+ P + HYG MVDLLG+AG L+EA E+I MP + + +WG
Sbjct: 555 AGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWG 614
Query: 504 ALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKN 563
LL A R H NVE+ E+A ++ G +LS++YA+ GRW+D +R ++ ++
Sbjct: 615 MLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRD 674
Query: 564 V 564
V
Sbjct: 675 V 675
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 134/578 (23%), Positives = 258/578 (44%), Gaps = 120/578 (20%)
Query: 103 TSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVF 162
T A+ SAL SCA D G IH +V G D+ Y+ ++L++Y+K + A VF
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 163 DEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANS 222
+ A+ + S+N ++ GY+++ L +A LFD +P + +S+ ++I GY++ +A
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 223 LFQKMPERNLASWNTMIAGYIDSGSIL--------------------------------- 249
LF++M + +A I + S L
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 250 ------SAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIAC 303
AR++FD MP+RN V+ M+ GYSK+G ++ A +LFDQ+ EKD++S+ MI
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ-------------------- 343
+ ++ EAL + ML+ + P ++ + ++SA ++
Sbjct: 280 CLRKNQLDEALVYYTEMLR--CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFD 337
Query: 344 -----LGDLEHWRWIESHI----NDFGVVLDDHLAT--ALVDLYAKSGSIDKAYELFHGL 392
+ H+ + + I F + DH+A+ AL+ + K+G +++A E+F
Sbjct: 338 CYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQT 397
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVEEG 451
+D+ +++AMI G+ + A+ LF +M+ + + P+ +T + +A + G +EEG
Sbjct: 398 HDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEG 457
Query: 452 YWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA------------------------- 486
+ + + + P + ++D+ + G ++ A
Sbjct: 458 KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGS 517
Query: 487 ------------YELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD--- 531
Y + ++P +PN+ + +L AC VELG+ + ++SD
Sbjct: 518 ATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFE---SMKSDHGI 574
Query: 532 --TVGYYSLLSSIYANLGRWDDAKKL--RMGVKGKNVI 565
+ +Y + + GR ++AK++ +M VK +I
Sbjct: 575 EPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMI 612
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 201/408 (49%), Gaps = 29/408 (7%)
Query: 22 IHAHILINGLHHLEPLF----IHHILLWDV--NNYKP--LSHYVHPILHNLHNPDSFSWG 73
+H + L L LF +++ W+V N Y L + + D SWG
Sbjct: 215 LHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWG 274
Query: 74 CVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL 133
+I +K Q EA+ Y +M R G+ P+ + L + AR G+ +HG +
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF 193
G+D ++Q ++ Y+ D+ A + F+ + ++ S N+L++G++K G +++A+ +F
Sbjct: 335 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 394
Query: 194 DKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN--TMIAGYIDSGSILSA 251
D+ KD+ SWN+MISGY+++ + A LF++M + + TM++ + S+ S
Sbjct: 395 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 454
Query: 252 RE--------VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQ---MDEKDLLSYNAM 300
E F +P ++++ +I Y+K G +++A +F Q + + +NA+
Sbjct: 455 EEGKRAHDYLNFSTIPPNDNLT-AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR-WIESHIND 359
I A + K AL+L++ + + + P+ +T V+SAC G +E + + ES +D
Sbjct: 514 ICGSATHGHAKLALDLYSDL--QSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSD 571
Query: 360 FGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGF 407
G+ D +VDL K+G +++A E+ K+ V MI+G
Sbjct: 572 HGIEPDIKHYGCMVDLLGKAGRLEEAKEMI----KKMPVKADVMIWGM 615
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 168/522 (32%), Positives = 289/522 (55%), Gaps = 18/522 (3%)
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
L P + +++ + F + ++L+ +++ GL P + + LKS R++ + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
+HG G + YV +L+ +Y+ +G + KVFDEM +++VVSWN L+S Y+
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 184 GDLDEAQHLFDKIPGKDVISWN-----SMISGYSKAGNMDQANSLFQKMP---ERNLASW 235
G ++A +F ++ + + ++ S +S S N++ +++ + E ++
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
N ++ + G + AR VFD+M +N +M+ GY +G +D A LF++ KD++
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
+ AM+ Y Q ++ EALELF M + PD L S+++ C+Q G LE +WI
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTA--GIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
+IN+ V +D + TALVD+YAK G I+ A E+F+ +++RD +++++IYG +NG +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 416 AIKLFEQMLGENIGPNL--VTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGI 472
A+ L+ +M EN+G L +T+ +LTA NH G V EG F+SM + + P +H
Sbjct: 364 ALDLYYEM--ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSC 421
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPN---ADVWGALLLACRLHNNVELGEIAVQHCIKLE 529
++DLL RAG LDEA ELI M + + V+ +LL A R + NV++ E + K+E
Sbjct: 422 LIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVE 481
Query: 530 SDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
++LL+S+YA+ RW+D +R +K + K PGCS
Sbjct: 482 VSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCS 523
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 178/347 (51%), Gaps = 15/347 (4%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCAR 116
H + + D SW +I + G+F +A+ ++ +M Q L I S L +C+
Sbjct: 101 HKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSA 160
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
+++ G I+ V V ++ V + AL+D++ K G + AR VFD M +KNV W S+
Sbjct: 161 LKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSM 219
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
+ GY+ G +DEA+ LF++ P KDV+ W +M++GY + D+A LF+ M + N
Sbjct: 220 VFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDN 279
Query: 237 ----TMIAGYIDSGSILSAREVFDAMPKRNSVSL-----ITMIAGYSKSGDVDSAHKLFD 287
+++ G +G++ + + + + N V++ ++ Y+K G +++A ++F
Sbjct: 280 FVLVSLLTGCAQTGALEQGKWIHGYINE-NRVTVDKVVGTALVDMYAKCGCIETALEVFY 338
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
++ E+D S+ ++I A N AL+L+ M + V D +T +V++AC+ G +
Sbjct: 339 EIKERDTASWTSLIYGLAMNGMSGRALDLYYEM--ENVGVRLDAITFVAVLTACNHGGFV 396
Query: 348 EHWRWI-ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
R I S V + L+DL ++G +D+A EL +R
Sbjct: 397 AEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 205/687 (29%), Positives = 330/687 (48%), Gaps = 118/687 (17%)
Query: 3 ATKLT-TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILL-WDVNNYKPLSHYVHPI 60
TK T + +K C T++ K H + GL + + ++ + LS + +
Sbjct: 31 CTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLS-FAKEV 89
Query: 61 LHNLHNPDS-FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
N + + F + +IR ++ G EA+ L+++M G+ P + L +CA+ +
Sbjct: 90 FENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRA 149
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
K G+ IHG + +GY ++VQ +L+ Y++ G++ +ARKVFDEM+E+NVVSW S++ G
Sbjct: 150 KGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICG 209
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNS--------------------------------- 206
Y + +A LF ++ + ++ NS
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 207 ---MISG----YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM- 258
M+S Y K +D A LF + NL N M + Y+ G A VF+ M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 259 ---PKRNSVSLITMIAG-----------------------------------YSKSGDVD 280
+ + +S+++ I+ Y K D
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 281 SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN-------------- 326
+A ++FD+M K ++++N+++A Y +N + A E F M PE N
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM--PEKNIVSWNTIISGLVQG 447
Query: 327 ------------------VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
V+ D +T+ S+ SAC LG L+ +WI +I G+ LD L
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 369 ATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENI 428
T LVD++++ G + A +F+ L RD+ A++A I + G A AI+LF+ M+ + +
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 429 GPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAY 487
P+ V + G LTA +H GLV++G F SM K +G+ P HYG MVDLLGRAG L+EA
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 488 ELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLG 547
+LI +MP +PN +W +LL ACR+ NVE+ A + L + G Y LLS++YA+ G
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 548 RWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
RW+D K+R+ +K K + K PG S Q
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 205/687 (29%), Positives = 330/687 (48%), Gaps = 118/687 (17%)
Query: 3 ATKLT-TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILL-WDVNNYKPLSHYVHPI 60
TK T + +K C T++ K H + GL + + ++ + LS + +
Sbjct: 31 CTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLS-FAKEV 89
Query: 61 LHNLHNPDS-FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
N + + F + +IR ++ G EA+ L+++M G+ P + L +CA+ +
Sbjct: 90 FENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRA 149
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
K G+ IHG + +GY ++VQ +L+ Y++ G++ +ARKVFDEM+E+NVVSW S++ G
Sbjct: 150 KGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICG 209
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNS--------------------------------- 206
Y + +A LF ++ + ++ NS
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 207 ---MISG----YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM- 258
M+S Y K +D A LF + NL N M + Y+ G A VF+ M
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 259 ---PKRNSVSLITMIAG-----------------------------------YSKSGDVD 280
+ + +S+++ I+ Y K D
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 281 SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN-------------- 326
+A ++FD+M K ++++N+++A Y +N + A E F M PE N
Sbjct: 390 TAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM--PEKNIVSWNTIISGLVQG 447
Query: 327 ------------------VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
V+ D +T+ S+ SAC LG L+ +WI +I G+ LD L
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 369 ATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENI 428
T LVD++++ G + A +F+ L RD+ A++A I + G A AI+LF+ M+ + +
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 429 GPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAY 487
P+ V + G LTA +H GLV++G F SM K +G+ P HYG MVDLLGRAG L+EA
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 488 ELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLG 547
+LI +MP +PN +W +LL ACR+ NVE+ A + L + G Y LLS++YA+ G
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 548 RWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
RW+D K+R+ +K K + K PG S Q
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/637 (30%), Positives = 313/637 (49%), Gaps = 90/637 (14%)
Query: 22 IHAHILINGLHHLEPLFIHHI--LLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFF 79
IH H+L L + ++ L N + H I H NP +W +IR +
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINP--IAWDLMIRAY 78
Query: 80 SQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCV 139
+ +A+ LY +M G+ PT + LK+CA ++ G IH V+ + T +
Sbjct: 79 ASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDM 138
Query: 140 YVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL------------------ 181
YV TAL+D Y+K G++ A KVFDEM ++++V+WN+++SG+
Sbjct: 139 YVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRI 198
Query: 182 ------------------KAGDLDE--AQHLFDKIPG--KDVISWNSMISGYSKAGNMDQ 219
+AG L E A H + G D++ ++ Y+K+ +
Sbjct: 199 DGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIY 258
Query: 220 ANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLIT----------- 268
A +F ++N +W+ MI GY+++ I A EVF M ++V+++T
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGC 318
Query: 269 ------------------------------MIAGYSKSGDVDSAHKLFDQMDEKDLLSYN 298
+I+ Y+K G + A + F ++ KD++SYN
Sbjct: 319 ARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYN 378
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
++I N +P+E+ LF+ M + PD TL V++ACS L L H +
Sbjct: 379 SLITGCVVNCRPEESFRLFHEMRTS--GIRPDITTLLGVLTACSHLAALGHGSSCHGYCV 436
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIK 418
G ++ + AL+D+Y K G +D A +F + KRD+V+++ M++GFGI+G +A+
Sbjct: 437 VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALS 496
Query: 419 LFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK--DNGLVPLVDHYGIMVDL 476
LF M + P+ VT IL+A +H+GLV+EG FNSM D ++P +DHY M DL
Sbjct: 497 LFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDL 556
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY 536
L RAG+LDEAY+ + MP +P+ V G LL AC + N ELG V ++ +T
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGN-EVSKKMQSLGETTESL 615
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
LLS+ Y+ RW+DA ++RM K + ++KTPG SW
Sbjct: 616 VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 138/329 (41%), Gaps = 47/329 (14%)
Query: 109 SALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDL---YSKMGDVGTARKVFDEM 165
S L++C R ++ + G IH H+L + T L++L Y+ +V AR VFDE+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQ--HLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 166 AEK--NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQ 219
N ++W+ ++ Y ++A L+ K+ V ++ ++ + +D
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 220 ANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSK 275
+ + + A+ ++ Y G + A +VFD MPKR+ V+ MI+G+S
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 276 SGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
+ LF M D LS P+ T+
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLS--------------------------------PNLSTIV 209
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
+ A + G L + + + G D + T ++D+YAKS I A +F K+
Sbjct: 210 GMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKK 269
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQML 424
+ V +SAMI G+ N +A ++F QML
Sbjct: 270 NEVTWSAMIGGYVENEMIKEAGEVFFQML 298
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 194/639 (30%), Positives = 316/639 (49%), Gaps = 83/639 (12%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
K+ ++++H Q HA I+++G + L L +++ + +Y I ++ PD
Sbjct: 26 FFKRSTSISHLAQTHAQIILHGFRNDISLLTK--LTQRLSDLGAI-YYARDIFLSVQRPD 82
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQR-MGLCPTSHAISSALKSCARIQDKLGGVSIH 127
F + ++R FS ++S++ +++ L P S + A+ + + +D G IH
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH 142
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
GQ V G D+ + + + ++ +Y K V ARKVFD M EK+ + WN+++SGY K
Sbjct: 143 GQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 188 EAQHLF-----------------DKIP----------GKDVISWNS-------------M 207
E+ +F D +P G + S +
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYID----------------SGSILSA 251
IS YSK G + ++LF++ + ++ ++N MI GY SG+ L +
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 252 REVFDAMPKRNSVSLITMIAGY--------------------SKSGDVDSAHKLFDQMDE 291
+ +P + LI I GY SK +++SA KLFD+ E
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
K L S+NAMI+ Y QN ++A+ LF M K E + P+ +T+ ++SAC+QLG L +
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS--PNPVTITCILSACAQLGALSLGK 440
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
W+ + +++TAL+ +YAK GSI +A LF + K++ V ++ MI G+G++G
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHG 500
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHY 470
+ +A+ +F +ML I P VT+ +L A +HAGLV+EG FNSM G P V HY
Sbjct: 501 QGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES 530
MVD+LGRAG L A + I M +P + VW LL ACR+H + L + +L+
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDP 620
Query: 531 DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
D VGY+ LLS+I++ + A +R K + + K PG
Sbjct: 621 DNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 299/573 (52%), Gaps = 71/573 (12%)
Query: 1 MVATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPI 60
+ L ++K+CST + A ++ L+ + + + + ++K L V
Sbjct: 771 LAPPNLKKIIKQCSTPKLLESALAAMIKTSLN--QDCRLMNQFITACTSFKRLDLAV-ST 827
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ + P+ F + + + F I ++ LYV+M R + P+S+ SS +K+ + +
Sbjct: 828 MTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS-FASR 886
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G S+ + G+ V +QT L+D YS G + ARK
Sbjct: 887 FGE-SLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARK-------------------- 925
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA 240
+FD++P +D I+W +M+S Y + +MD ANSL +M E+N A+ N +I
Sbjct: 926 -----------VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLIN 974
Query: 241 GYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAM 300
GY+ G++ A +F+ MP ++ +S TMI GYS
Sbjct: 975 GYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYS-------------------------- 1008
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
QN + +EA+ +F M+ E + PD++T+++VISAC+ LG LE + + +
Sbjct: 1009 -----QNKRYREAIAVFYKMM--EEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 1061
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
G VLD ++ +ALVD+Y+K GS+++A +F L K++L ++++I G +G A +A+K+F
Sbjct: 1062 GFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMF 1121
Query: 421 EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGR 479
+M E++ PN VT+ + TA HAGLV+EG + SM D+ +V V+HYG MV L +
Sbjct: 1122 AKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSK 1181
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
AG + EA ELI NM +PNA +WGALL CR+H N+ + EIA + LE GYY LL
Sbjct: 1182 AGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLL 1241
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIK-TPGCS 571
S+YA RW D ++R ++ + K PG S
Sbjct: 1242 VSMYAEQNRWRDVAEIRGRMRELGIEKICPGTS 1274
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 188/645 (29%), Positives = 320/645 (49%), Gaps = 97/645 (15%)
Query: 15 TLNHAKQIHAHILINGL---HHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFS 71
+++ K +H H++ G H L L + + L + Y + + S
Sbjct: 30 SISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIT-------YARKLFEEMPQSSLLS 82
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGL--CPTSHAISSALKSCARIQDKLGGVSIHGQ 129
+ VIR + ++G + +A+S++++M G+ P + K+ ++ G+ +HG+
Sbjct: 83 YNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGR 142
Query: 130 VHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEA 189
+ + YVQ ALL +Y G V AR VFD M ++V+SWN+++SGY + G +++A
Sbjct: 143 ILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDA 202
Query: 190 QHLFD---------------------------------------KIPGKDVISWNSMISG 210
+FD K G + N++++
Sbjct: 203 LMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 211 YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSL 266
Y K G MD+A +F +M R++ +W MI GY + G + +A E+ M + N+V++
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 267 -----------------------------------ITMIAGYSKSGDVDSAHKLFDQMDE 291
++I+ Y+K VD ++F +
Sbjct: 323 ASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASK 382
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
++A+IA QN +AL LF M + + V P+ TL S++ A + L DL
Sbjct: 383 YHTGPWSAIIAGCVQNELVSDALGLFKRMRRED--VEPNIATLNSLLPAYAALADLRQAM 440
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGF 407
I ++ G + AT LV +Y+K G+++ A+++F+G++++ D+V + A+I G+
Sbjct: 441 NIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPL 466
G++G +A+++F +M+ + PN +T+T L A +H+GLVEEG F M ++ +
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCI 526
+HY +VDLLGRAG LDEAY LI +P +P + VWGALL AC H NV+LGE+A
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 527 KLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+LE + G Y LL++IYA LGRW D +K+R ++ + K PG S
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHS 665
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 304/573 (53%), Gaps = 33/573 (5%)
Query: 21 QIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFS 80
Q+HAH + +G+ + L + + N L + I+ N W +I ++
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFN---LHNEAQSIIENSDILHPLPWNVLIASYA 120
Query: 81 QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVY 140
+ F E ++ Y +M G+ P + S LK+C D G +HG + V Y + +Y
Sbjct: 121 KNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLY 180
Query: 141 VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI--PG 198
V AL+ +Y + ++G AR++FD M E++ VSWN++++ Y G EA LFDK+ G
Sbjct: 181 VCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSG 240
Query: 199 KDV--ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYID------SGSILS 250
+V I+WN + G + GN A L +M RN + +A I G+I
Sbjct: 241 VEVSVITWNIISGGCLQTGNYVGALGLISRM--RNFPTSLDPVAMIIGLKACSLIGAIRL 298
Query: 251 AREV--------FDAMPK-RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMI 301
+E+ +D + RN+ LITM YSK D+ A +F Q +E L ++N++I
Sbjct: 299 GKEIHGLAIHSSYDGIDNVRNT--LITM---YSKCKDLRHALIVFRQTEENSLCTWNSII 353
Query: 302 ACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFG 361
+ YAQ +K +EA L ML P+ +TLAS++ C+++ +L+H + +I
Sbjct: 354 SGYAQLNKSEEASHLLREMLVA--GFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 362 VVLD-DHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
D L +LVD+YAKSG I A ++ + KRD V Y+++I G+G G A+ LF
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 421 EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGR 479
++M I P+ VT +L+A +H+ LV EG F M+ + G+ P + H+ MVDL GR
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
AG+L +A ++I NMP +P+ W LL AC +H N ++G+ A + ++++ + GYY L+
Sbjct: 532 AGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLI 591
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+++YA G W ++R ++ V K PGC+W
Sbjct: 592 ANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAW 624
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 153/352 (43%), Gaps = 24/352 (6%)
Query: 105 HAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDE 164
H+ +S L +C ++ L GV +H G + + L+ YS A+ + +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 165 MAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQA 220
+ + WN L++ Y K +E + ++ K D ++ S++ + +D A
Sbjct: 104 SDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE--TLDVA 161
Query: 221 ------NSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYS 274
S+ + +L N +I+ Y ++ AR +FD M +R++VS +I Y+
Sbjct: 162 FGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 275 KSGDVDSAHKLFDQM----DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPD 330
G A +LFD+M E ++++N + Q AL L + M ++ P
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPV 281
Query: 331 KMTLASVISACSQLGDLEHWRWIES---HINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
M + + ACS +G + + I H + G+ D++ L+ +Y+K + A
Sbjct: 282 AMIIG--LKACSLIGAIRLGKEIHGLAIHSSYDGI---DNVRNTLITMYSKCKDLRHALI 336
Query: 388 LFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
+F + L ++++I G+ ++ +A L +ML PN +T IL
Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASIL 388
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 314/642 (48%), Gaps = 88/642 (13%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
L+ KC+ ++ +Q H + NGL + + L+ Y + V + PD
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLV---FDQIPEPD 106
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHG 128
+ W ++R + + +E V LY + + G S ALK+C +QD G IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 129 Q-VHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
Q V V +D V T LLD+Y+K G++ +A KVF+++ +NVV W S+++GY+K +
Sbjct: 167 QLVKVPSFDNVVL--TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 188 EAQHLFDKIPGKDVI----------------------SW-----------------NSMI 208
E LF+++ +V+ W S++
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 209 SGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSV 264
Y K G++ A +F + +L W MI GY +GS+ A +F M K N V
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 265 SLITMIAG----------------------------------YSKSGDVDSAHKLFDQMD 290
++ ++++G Y+K A +F+
Sbjct: 345 TIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMES 404
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
EKD++++N++I+ ++QN EAL LF+ M +V P+ +T+AS+ SAC+ LG L
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE--SVTPNGVTVASLFSACASLGSLAVG 462
Query: 351 RWIESHINDFGVVLDD--HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
+ ++ G + H+ TAL+D YAK G A +F + +++ + +SAMI G+G
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 522
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLV 467
G +++LFE+ML + PN T+T IL+A H G+V EG F+SM KD P
Sbjct: 523 KQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
HY MVD+L RAG L++A ++I MP QP+ +GA L C +H+ +LGEI ++ +
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD 642
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
L D YY L+S++YA+ GRW+ AK++R +K + + K G
Sbjct: 643 LHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAG 684
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/547 (21%), Positives = 239/547 (43%), Gaps = 97/547 (17%)
Query: 10 MKKCSTL---NHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHY--VHPILHNL 64
+K C+ L ++ K+IH ++ P F + +L ++ Y H + +++
Sbjct: 149 LKACTELQDLDNGKKIHCQLV------KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDI 202
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ W +I + + E + L+ +M+ + + + + +C ++ G
Sbjct: 203 TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGK 262
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
HG + G + + T+LLD+Y K GD+ AR+VF+E + ++V W +++ GY G
Sbjct: 263 WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 185 DLDEAQHLFDKIPGKDV----ISWNSMISG------------------------------ 210
++EA LF K+ G ++ ++ S++SG
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANA 382
Query: 211 ----YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----N 262
Y+K A +F+ E+++ +WN++I+G+ +GSI A +F M N
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 263 SVSLITMIAG-------------------------------------YSKSGDVDSAHKL 285
V++ ++ + Y+K GD SA +
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
FD ++EK+ ++++AMI Y + +LELF MLK + P++ T S++SAC G
Sbjct: 503 FDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQ--QKPNESTFTSILSACGHTG 560
Query: 346 DL-EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAM 403
+ E ++ S D+ T +VD+ A++G +++A ++ + + D+ + A
Sbjct: 561 MVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT-AYNHAGLVEEGYWCFNSMKDNG 462
++G G++ R + ++ML ++ P+ +Y +++ Y G + N MK G
Sbjct: 621 LHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRG 678
Query: 463 LVPLVDH 469
L + H
Sbjct: 679 LSKIAGH 685
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 191/601 (31%), Positives = 299/601 (49%), Gaps = 85/601 (14%)
Query: 57 VHPILHNLHNPDSF-SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
+H L+ + S +W IR + +E++ L+ +M+R G P + K+CA
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA 63
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
R+ D +H + + + V+V TA +D++ K V A KVF+ M E++ +WN+
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 176 LLSGYLKAGDLDEAQHLFDKIP-------------------------------------G 198
+LSG+ ++G D+A LF ++ G
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 199 KDV--ISWNSMISGYSKAGNMDQANSLFQKMP--ERNLASWNTMIAGYIDSGSILSA--- 251
DV N+ IS Y K G++D A +F+ + +R + SWN+M Y G A
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 252 -----REVFD---------AMPKRNSVSLI----------------------TMIAGYSK 275
RE F A +N +L T I+ YSK
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSK 303
Query: 276 SGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
S D SA LFD M + +S+ MI+ YA+ EAL LF+ M+K PD +TL
Sbjct: 304 SEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKS--GEKPDLVTLL 361
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAYELFHGLRK 394
S+IS C + G LE +WI++ + +G D+ + AL+D+Y+K GSI +A ++F +
Sbjct: 362 SLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPE 421
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
+ +V ++ MI G+ +NG +A+KLF +M+ + PN +T+ +L A H+G +E+G+
Sbjct: 422 KTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEY 481
Query: 455 FNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHN 513
F+ MK + P +DHY MVDLLGR G L+EA ELI NM +P+A +WGALL AC++H
Sbjct: 482 FHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHR 541
Query: 514 NVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
NV++ E A + LE Y +++IYA G WD ++R +K +N+ K PG S
Sbjct: 542 NVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVI 601
Query: 574 Q 574
Q
Sbjct: 602 Q 602
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 199/478 (41%), Gaps = 92/478 (19%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
Y + + D+ +W ++ F Q G +A SL+ +M+ + P S + + ++S +
Sbjct: 105 YAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFD--EMAEKNVVSW 173
+ ++H LG D V V + Y K GD+ +A+ VF+ + ++ VVSW
Sbjct: 165 FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 174 NSLLSGYLKAGDLDEA---------------------------------------QHLFD 194
NS+ Y G+ +A H
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 195 KIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREV 254
+D+ + N+ IS YSK+ + A LF M R SW MI+GY + G + A +
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 255 FDAMPKRNS----VSLITMIAG------------------------------------YS 274
F AM K V+L+++I+G YS
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYS 404
Query: 275 KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
K G + A +FD EK ++++ MIA YA N EAL+LF+ M+ +++ P+ +T
Sbjct: 405 KCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI--DLDYKPNHITF 462
Query: 335 ASVISACSQLGDLEH-WRW--IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
+V+ AC+ G LE W + I + + LD + + +VDL + G +++A EL
Sbjct: 463 LAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHY--SCMVDLLGRKGKLEEALELIRN 520
Query: 392 LR-KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVT-YTGILTAYNHAGL 447
+ K D + A++ I+ A + E + N+ P + Y + Y AG+
Sbjct: 521 MSAKPDAGIWGALLNACKIHRNVKIAEQAAESLF--NLEPQMAAPYVEMANIYAAAGM 576
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 302/579 (52%), Gaps = 43/579 (7%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L L+ +CS+L KQI ++ L + L I+ ++ + + + Y ILH++
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLR-DDLIINKVVTF-LGKSADFASYSSVILHSIR 66
Query: 66 NP-DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ SFS+ ++ ++ + + Y G P K+C + G
Sbjct: 67 SVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGK 126
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
IHG V +G+ +YVQ +L+ Y G+ A KV
Sbjct: 127 QIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV----------------------- 163
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP-ERNLASWNTMIAGYI 243
F ++P +DV+SW +I+G+++ G +A F KM E NLA++ ++
Sbjct: 164 --------FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSG 215
Query: 244 DSGSILSAREVFDAMPKRNS-VSLIT---MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNA 299
G + + + + KR S +SL T +I Y K + A ++F ++++KD +S+N+
Sbjct: 216 RVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNS 275
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIND 359
MI+ + KEA++LF+ M + + PD L SV+SAC+ LG ++H RW+ +I
Sbjct: 276 MISGLVHCERSKEAIDLFSLM-QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT 334
Query: 360 FGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKL 419
G+ D H+ TA+VD+YAK G I+ A E+F+G+R +++ ++A++ G I+G ++++
Sbjct: 335 AGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRY 394
Query: 420 FEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN--GLVPLVDHYGIMVDLL 477
FE+M+ PNLVT+ L A H GLV+EG F+ MK L P ++HYG M+DLL
Sbjct: 395 FEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLL 454
Query: 478 GRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNV-ELGEIAVQHCIKLESDTVGYY 536
RAG LDEA EL+ MP +P+ + GA+L AC+ + EL + + + +E + G Y
Sbjct: 455 CRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVY 514
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQR 575
LLS+I+A RWDD ++R +K K + K PG S+ ++
Sbjct: 515 VLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIEK 553
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/585 (30%), Positives = 293/585 (50%), Gaps = 79/585 (13%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ ++ D+F W +I+ F+ G +IEAV Y +M G+ + +KS A I
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G IH V LG+ + VYV +L+ LY K+G A KVF+EM E+++VSWNS++SG
Sbjct: 146 LEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISG 205
Query: 180 YLKAGD--------------------------LDEAQHLFDKIPGK-------------- 199
YL GD L H++ GK
Sbjct: 206 YLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG 265
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP 259
DV+ S++ YSK G + A +F M +RN+ +WN MI Y +G + A F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 260 KRN--------SVSLI----------------------------TMIAGYSKSGDVDSAH 283
++N S++L+ +I Y + G + SA
Sbjct: 326 EQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAE 385
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
+FD+M EK+++S+N++IA Y QN K ALELF + + PD T+AS++ A ++
Sbjct: 386 VIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV--PDSTTIASILPAYAE 443
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
L R I ++I + + +LV +YA G ++ A + F+ + +D+V+++++
Sbjct: 444 SLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSI 503
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNG 462
I + ++G ++ LF +M+ + PN T+ +L A + +G+V+EG+ F SMK + G
Sbjct: 504 IMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYG 563
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV 522
+ P ++HYG M+DL+GR G A + MP P A +WG+LL A R H ++ + E A
Sbjct: 564 IDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAA 623
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKT 567
+ K+E D G Y LL ++YA GRW+D ++++ ++ K + +T
Sbjct: 624 EQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRT 668
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 200/478 (41%), Gaps = 126/478 (26%)
Query: 158 ARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI--------------------- 196
A ++FDEM + + WN ++ G+ G EA + ++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 197 -----PGK-------------DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTM 238
GK DV NS+IS Y K G A +F++MPER++ SWN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 239 IAGYIDSGSILSAREVFDAM------PKRNS----------------------------- 263
I+GY+ G S+ +F M P R S
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 264 -----VSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFN 318
+ + +++ YSK G+V A ++F+ M +++++++N MI CYA+N + +A F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 319 YMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAK 378
M + + PD +T +++ A + L R I + G + L TAL+D+Y +
Sbjct: 323 KM-SEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGE 377
Query: 379 SGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGI 438
G + A +F + ++++++++++I + NG+ A++LF+++ ++ P+ T I
Sbjct: 378 CGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 439 LTAYN-----------HAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDL----------- 476
L AY HA +V+ YW N++ N LV + G + D
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWS-NTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 477 ---------------LGRAG-WLDEAYELIINMPTQPNADVWGALLLACRLHNNVELG 518
GR WL + +I PN + +LL AC + V+ G
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWL---FSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 171/346 (49%), Gaps = 25/346 (7%)
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM----PERNL 232
L G+ + +++A LFD++ D WN MI G++ G +A + +M + +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQ 288
++ +I S+ +++ + K VS + ++I+ Y K G A K+F++
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS-----Q 343
M E+D++S+N+MI+ Y +L LF MLK PD+ + S + ACS +
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK--CGFKPDRFSTMSALGACSHVYSPK 248
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
+G H + S I V+ + T+++D+Y+K G + A +F+G+ +R++VA++ M
Sbjct: 249 MGKEIHCHAVRSRIETGDVM----VMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 404 IYGFGINGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
I + NGR +DA F++M +N + P+++T +L A + EG G
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRRG 360
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
+P + ++D+ G G L A E+I + + N W +++ A
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAA 405
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Query: 243 IDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIA 302
I + L R+ + + N +L + G++ S ++ A +LFD+M++ D +N MI
Sbjct: 44 ISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIK 103
Query: 303 CYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGV 362
+ EA++ ++ M+ V D T VI + + + LE + I + + G
Sbjct: 104 GFTSCGLYIEAVQFYSRMVFA--GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGF 161
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQ 422
V D ++ +L+ LY K G A ++F + +RD+V++++MI G+ G ++ LF++
Sbjct: 162 VSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKE 221
Query: 423 MLGENIGPNLVTYTGILTAYNH 444
ML P+ + L A +H
Sbjct: 222 MLKCGFKPDRFSTMSALGACSH 243
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 289/547 (52%), Gaps = 48/547 (8%)
Query: 74 CVIRFF----SQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
CV + F + K + +AVS + + G+ ++S L+ C + G IH
Sbjct: 12 CVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRH 71
Query: 130 VHVLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDE 188
+ + G+ + L+ +Y K G A KVFD+M +N+ SWN+++SGY+K+G L
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVR 131
Query: 189 AQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL---------------- 232
A+ +FD +P +DV+SWN+M+ GY++ GN+ +A +++ +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 233 ---------ASWNTMIAGYIDS--------------GSILSAREVFDAMPKRNSVSLITM 269
A ++AG++ + G + SA+ FD M ++ T+
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTL 251
Query: 270 IAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
I+GY+K GD+++A KLF +M EK+ +S+ A+IA Y + AL+LF M+ + V P
Sbjct: 252 ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA--LGVKP 309
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
++ T +S + A + + L H + I ++ V + + ++L+D+Y+KSGS++ + +F
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 390 HGLR-KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLV 448
K D V ++ MI +G A+++ + M+ + PN T IL A +H+GLV
Sbjct: 370 RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 449 EEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLL 507
EEG F SM +G+VP +HY ++DLLGRAG E I MP +P+ +W A+L
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 508 ACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKT 567
CR+H N ELG+ A IKL+ ++ Y LLSSIYA+ G+W+ +KLR +K + V K
Sbjct: 490 VCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKE 549
Query: 568 PGCSWTQ 574
SW +
Sbjct: 550 KAVSWIE 556
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 213/423 (50%), Gaps = 48/423 (11%)
Query: 6 LTTLMKKC---STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPL--------- 53
L +L+++C +L K IH H+ I G L +H++ + KP+
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 54 ------------SHYVHP--------ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYV 93
S YV + ++ D SW ++ ++Q G EA+ Y
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 94 QMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMG 153
+ +R G+ + + L +C + + HGQV V G+ + V + +++D Y+K G
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 154 DVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSK 213
+ +A++ FDEM K++ W +L+SGY K GD++ A+ LF ++P K+ +SW ++I+GY +
Sbjct: 229 QMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR 288
Query: 214 AGNMDQANSLFQKM------PERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----NS 263
G+ ++A LF+KM PE+ ++++ + S+ +E+ M + N+
Sbjct: 289 QGSGNRALDLFRKMIALGVKPEQ--FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 264 VSLITMIAGYSKSGDVDSAHKLFDQMDEK-DLLSYNAMIACYAQNSKPKEALELFNYMLK 322
+ + ++I YSKSG ++++ ++F D+K D + +N MI+ AQ+ +AL + + M+K
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 323 PEINVHPDKMTLASVISACSQLGDLEH-WRWIESHINDFGVVLDDHLATALVDLYAKSGS 381
V P++ TL +++ACS G +E RW ES G+V D L+DL ++G
Sbjct: 407 --FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 382 IDK 384
+
Sbjct: 465 FKE 467
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 305/584 (52%), Gaps = 83/584 (14%)
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMG-LCPTSHAISSALKSCARIQDKLGGVSIHG 128
FSW ++ ++++G F EA+ LY +M +G + P + L++C I D G +H
Sbjct: 161 FSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHV 220
Query: 129 QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDE 188
V GY+ + V AL+ +Y K GDV +AR +FD M ++++SWN+++SGY + G E
Sbjct: 221 HVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHE 280
Query: 189 AQHLF--------------------------DKIPGKDVISW-------------NSMIS 209
LF D+ G+D+ ++ NS+
Sbjct: 281 GLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQ 340
Query: 210 GYSKAGNMDQANSLFQKMPERNLASWNTMIAGY-------------------------ID 244
Y AG+ +A LF +M +++ SW TMI+GY I
Sbjct: 341 MYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 245 SGSILSA----------REVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMD 290
++LSA E+ K +S + +I YSK +D A +F +
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
K+++S+ ++IA N++ EAL M ++ + P+ +TL + ++AC+++G L
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQM---KMTLQPNAITLTAALAACARIGALMCG 517
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
+ I +H+ GV LDD L AL+D+Y + G ++ A+ F+ +K+D+ +++ ++ G+
Sbjct: 518 KEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSER 576
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
G+ S ++LF++M+ + P+ +T+ +L + + +V +G F+ M+D G+ P + HY
Sbjct: 577 GQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHY 636
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES 530
+VDLLGRAG L EA++ I MP P+ VWGALL ACR+H+ ++LGE++ QH +L+
Sbjct: 637 ACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDK 696
Query: 531 DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+VGYY LL ++YA+ G+W + K+R +K + GCSW +
Sbjct: 697 KSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 198/425 (46%), Gaps = 91/425 (21%)
Query: 83 GQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQ 142
G+ EA+ L MQ + + + ++ C + + G ++ V +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 143 TALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK------- 195
A L ++ + G++ A VF +M+E+N+ SWN L+ GY K G DEA L+ +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 196 ----------------IP----GK-------------DVISWNSMISGYSKAGNMDQANS 222
IP GK D+ N++I+ Y K G++ A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 223 LFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAG------ 272
LF +MP R++ SWN MI+GY ++G E+F AM + ++L ++I+
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 273 -----------------------------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIAC 303
Y +G A KLF +M+ KD++S+ MI+
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE-----HWRWIESHIN 358
Y N P +A++ Y + + +V PD++T+A+V+SAC+ LGDL+ H I++ +
Sbjct: 373 YEYNFLPDKAID--TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIK 418
+ +V A L+++Y+K IDKA ++FH + ++++++++++I G +N R +A+
Sbjct: 431 SYVIV-----ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 419 LFEQM 423
QM
Sbjct: 486 FLRQM 490
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/532 (21%), Positives = 215/532 (40%), Gaps = 95/532 (17%)
Query: 16 LNHAKQIHAHILING----LHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFS 71
L K++H H++ G + + L ++ DV + + L + D S
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL-------FDRMPRRDIIS 264
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
W +I + + G E + L+ M+ + + P ++S + +C + D+ G IH V
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 132 VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY----------- 180
G+ + V +L +Y G A K+F M K++VSW +++SGY
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 181 --------------------LKA----GDLDEAQHLFDKIPGKDVISW----NSMISGYS 212
L A GDLD L +IS+ N++I+ YS
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 213 KAGNMDQANSLFQKMPERNLASWNTMIAG------------------------------- 241
K +D+A +F +P +N+ SW ++IAG
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAA 504
Query: 242 ---YIDSGSILSAREVFDAMPKRNSVSLITMIAG-----YSKSGDVDSAHKLFDQMDEKD 293
G+++ +E+ A R V L + Y + G +++A F+ +KD
Sbjct: 505 LAACARIGALMCGKEI-HAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKD 562
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
+ S+N ++ Y++ + +ELF+ M+K V PD++T S++ CS+ +
Sbjct: 563 VTSWNILLTGYSERGQGSMVVELFDRMVKSR--VRPDEITFISLLCGCSKSQMVRQGLMY 620
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGINGR 412
S + D+GV + +VDL ++G + +A++ + D + A++ I+ +
Sbjct: 621 FSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHK 680
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV 464
D +L Q + E ++ Y + Y G E MK+NGL
Sbjct: 681 I-DLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLT 731
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 121/245 (49%), Gaps = 15/245 (6%)
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI 267
+ G G +++A L M E +A + + A+E K S++L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQE---EGSKVYSIALS 122
Query: 268 TM-----------IAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALEL 316
+M +A + + G++ A +F +M E++L S+N ++ YA+ EA+ L
Sbjct: 123 SMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCL 182
Query: 317 FNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLY 376
++ ML V PD T V+ C + DL + + H+ +G LD + AL+ +Y
Sbjct: 183 YHRMLWVG-GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 377 AKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYT 436
K G + A LF + +RD+++++AMI G+ NG + ++LF M G ++ P+L+T T
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301
Query: 437 GILTA 441
+++A
Sbjct: 302 SVISA 306
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 167/475 (35%), Positives = 272/475 (57%), Gaps = 17/475 (3%)
Query: 109 SALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLD--LYSKMGD-VGTARKVFDEM 165
S L+ C++ Q++L IH ++ G Y T L + S D + A+ VFD
Sbjct: 19 SCLQRCSK-QEELK--QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGF 75
Query: 166 AEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQAN 221
+ WN ++ G+ + + + + L+ ++ + ++ S++ S ++
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 222 SLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
+ ++ E ++ + N++I Y +G+ A +FD +P+ + VS ++I GY K+G
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
+D A LF +M EK+ +S+ MI+ Y Q KEAL+LF+ M +V PD ++LA+
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS--DVEPDNVSLANA 253
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
+SAC+QLG LE +WI S++N + +D L L+D+YAK G +++A E+F ++K+ +
Sbjct: 254 LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
A++A+I G+ +G +AI F +M I PN++T+T +LTA ++ GLVEEG F S
Sbjct: 314 QAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYS 373
Query: 458 M-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVE 516
M +D L P ++HYG +VDLLGRAG LDEA I MP +PNA +WGALL ACR+H N+E
Sbjct: 374 MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIE 433
Query: 517 LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
LGE + I ++ G Y ++I+A +WD A + R +K + V K PGCS
Sbjct: 434 LGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 218/443 (49%), Gaps = 35/443 (7%)
Query: 8 TLMKKCSTLNHAKQIHAHILINGL---HHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
+ +++CS KQIHA +L GL + F+ + +++ P Y +
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP---YAQIVFDGF 75
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTS----HAISSALKSCARIQDK 120
PD+F W +IR FS + ++ LY QRM LC ++ + S LK+C+ +
Sbjct: 76 DRPDTFLWNLMIRGFSCSDEPERSLLLY---QRM-LCSSAPHNAYTFPSLLKACSNLSAF 131
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
IH Q+ LGY+ VY +L++ Y+ G+ A +FD + E + VSWNS++ GY
Sbjct: 132 EETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGY 191
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA 240
+KAG +D A LF K+ K+ ISW +MISGY +A +A LF +M ++ N +A
Sbjct: 192 VKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLA 251
Query: 241 GYIDSGSILSARE--------VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK 292
+ + + L A E + + +SV +I Y+K G+++ A ++F + +K
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK 311
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
+ ++ A+I+ YA + +EA+ F M K + + P+ +T +V++ACS G +E +
Sbjct: 312 SVQAWTALISGYAYHGHGREAISKFMEMQK--MGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 353 I-ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGIN 410
I S D+ + +VDL ++G +D+A + K + V + A++ I+
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 411 GRASDAIKLFEQMLGENIGPNLV 433
LGE IG L+
Sbjct: 430 KNIE---------LGEEIGEILI 443
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 288/557 (51%), Gaps = 51/557 (9%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQ-RMGLCPTSHAISSALKSCAR 116
+ + ++ ++ S+ +I F + G+F EA LY + + S+ + S +
Sbjct: 133 YELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGK 192
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
+ V + + V +C ++++ Y KMG + AR +FD M E+NV++W ++
Sbjct: 193 WNE---AVRVFQGMAVKEVVSC----SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAM 245
Query: 177 LSGYLKAGDLDEAQHLF---------------------------------------DKIP 197
+ GY KAG ++ LF ++P
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP 305
Query: 198 GK-DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFD 256
+ D+ NS++S YSK G M +A ++F M ++ SWN++I G + I A E+F+
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFE 365
Query: 257 AMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALEL 316
MP ++ VS MI G+S G++ +LF M EKD +++ AMI+ + N +EAL
Sbjct: 366 KMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCW 425
Query: 317 FNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLY 376
F+ ML+ E V P+ T +SV+SA + L DL I + +V D + +LV +Y
Sbjct: 426 FHKMLQKE--VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMY 483
Query: 377 AKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYT 436
K G+ + AY++F + + ++V+Y+ MI G+ NG A+KLF + PN VT+
Sbjct: 484 CKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFL 543
Query: 437 GILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT 495
+L+A H G V+ G+ F SMK + + P DHY MVDLLGR+G LD+A LI MP
Sbjct: 544 ALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPC 603
Query: 496 QPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
+P++ VWG+LL A + H V+L E+A + I+LE D+ Y +LS +Y+ +G+ D ++
Sbjct: 604 KPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRI 663
Query: 556 RMGVKGKNVIKTPGCSW 572
K K + K PG SW
Sbjct: 664 MNIKKSKRIKKDPGSSW 680
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/472 (24%), Positives = 229/472 (48%), Gaps = 57/472 (12%)
Query: 137 TCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG------------ 184
T ++ + + +++ G++ A +F +M+ +++VSW +++S Y + G
Sbjct: 48 TAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM 107
Query: 185 --------------------DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLF 224
DL +A LF IP K+ +S+ +MI+G+ +AG D+A L+
Sbjct: 108 PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY 167
Query: 225 QKMPE--RNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSA 282
+ P R+ + N +++GY+ +G A VF M + VS +M+ GY K G + A
Sbjct: 168 AETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDA 227
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
LFD+M E++++++ AMI Y + ++ LF M + E +V + TLA + AC
Sbjct: 228 RSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRM-RQEGDVKVNSNTLAVMFKACR 286
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
I ++ + D L +L+ +Y+K G + +A +F ++ +D V++++
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+I G + S+A +LFE+M G+ ++V++T ++ ++ G + + F G
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELF------G 396
Query: 463 LVPLVDH--YGIMVDLLGRAGWLDEA---YELIINMPTQPNADVWGALLLA-CRLHNNVE 516
++P D+ + M+ G+ +EA + ++ PN+ + ++L A L + +E
Sbjct: 397 MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Query: 517 LGEIAVQHCIKLESDTVGYYSL---LSSIYANLGRWDDAKKLRMGVKGKNVI 565
+I H ++ + V S+ L S+Y G +DA K+ + N++
Sbjct: 457 GLQI---HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIV 505
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 283/524 (54%), Gaps = 13/524 (2%)
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQR-MGLCPTSHAISSALKSCARIQD 119
L + D +W +I +S G AV Y M R T + + LK +
Sbjct: 95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH 154
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G IHGQV LG+++ + V + LL +Y+ +G + A+KVF + ++N V +NSL+ G
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SW 235
L G +++A LF + KD +SW +MI G ++ G +A F++M + L +
Sbjct: 215 LLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDE 291
+++ G+I +++ + + N I +I Y K + A +FD+M +
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ 333
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
K+++S+ AM+ Y Q + +EA+++F M + I+ PD TL ISAC+ + LE
Sbjct: 334 KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID--PDHYTLGQAISACANVSSLEEGS 391
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
G++ ++ +LV LY K G ID + LF+ + RD V+++AM+ + G
Sbjct: 392 QFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFG 451
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHY 470
RA + I+LF++M+ + P+ VT TG+++A + AGLVE+G F M + G+VP + HY
Sbjct: 452 RAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY 511
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES 530
M+DL R+G L+EA I MP P+A W LL ACR N+E+G+ A + I+L+
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDP 571
Query: 531 DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
Y+LLSSIYA+ G+WD +LR G++ KNV K PG SW +
Sbjct: 572 HHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 215/455 (47%), Gaps = 54/455 (11%)
Query: 126 IHGQV-HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
IHG + L Y ++ ++ Y+ M AR+VFD + + N+ SWN+LL Y KAG
Sbjct: 28 IHGNIIRALPYPE-TFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAG 86
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP---------------- 228
+ E + F+K+P +D ++WN +I GYS +G + A + M
Sbjct: 87 LISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTML 146
Query: 229 ------------------------ERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSV 264
E L + ++ Y + G I A++VF + RN+V
Sbjct: 147 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTV 206
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
+++ G G ++ A +LF M EKD +S+ AMI AQN KEA+E F M
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL--ATALVDLYAKSGSI 382
+ + D+ SV+ AC LG + + I + I DH+ +AL+D+Y K +
Sbjct: 266 LKM--DQYPFGSVLPACGGLGAINEGKQIHACI--IRTNFQDHIYVGSALIDMYCKCKCL 321
Query: 383 DKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAY 442
A +F ++++++V+++AM+ G+G GRA +A+K+F M I P+ T ++A
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Query: 443 NHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVW 502
+ +EEG +GL+ V +V L G+ G +D++ L M + +A W
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSW 440
Query: 503 GALLLA----CRLHNNVELGEIAVQHCIKLESDTV 533
A++ A R ++L + VQH +K + T+
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 151/330 (45%), Gaps = 18/330 (5%)
Query: 16 LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCV 75
+N KQIHA I+ + +++ L+ K L HY + + + SW +
Sbjct: 286 INEGKQIHACIIRTNFQ--DHIYVGSALIDMYCKCKCL-HYAKTVFDRMKQKNVVSWTAM 342
Query: 76 IRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY 135
+ + Q G+ EAV +++ MQR G+ P + + A+ +CA + G HG+ G
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL 402
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK 195
V V +L+ LY K GD+ + ++F+EM ++ VSW +++S Y + G E LFDK
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK 462
Query: 196 IP----GKDVISWNSMISGYSKAGNMDQANSLFQKMPER-----NLASWNTMIAGYIDSG 246
+ D ++ +IS S+AG +++ F+ M ++ ++ MI + SG
Sbjct: 463 MVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Query: 247 SILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVD----SAHKLFDQMDEKDLLSYNAMI 301
+ A + MP +++ T+++ G+++ +A L ++D Y +
Sbjct: 523 RLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI-ELDPHHPAGYTLLS 581
Query: 302 ACYAQNSKPKEALELFNYMLKPEINVHPDK 331
+ YA K +L M + + P +
Sbjct: 582 SIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 279/582 (47%), Gaps = 46/582 (7%)
Query: 5 KLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
+L TL+ H KQIH +L + + + LL Y +L L
Sbjct: 3 ELKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQL 62
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSL--YVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
W +I FS +S Y M+R G+ P+ H LK+ +++D
Sbjct: 63 QTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDS-N 121
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
H + G D+ +V+ NSL+SGY
Sbjct: 122 PFQFHAHIVKFGLDSDPFVR-------------------------------NSLISGYSS 150
Query: 183 AGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGY 242
+G D A LFD KDV++W +MI G+ + G+ +A F +M + +A+ +
Sbjct: 151 SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 243 IDSGS----ILSAREVFDAMPKRNSVSLITMIAG-----YSKSGDVDSAHKLFDQMDEKD 293
+ + + R V + V I Y K D A K+FD+M ++
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
++++ A+IA Y Q+ + + +F MLK +V P++ TL+SV+SAC+ +G L R +
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKS--DVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
++ + ++ T L+DLY K G +++A +F L ++++ ++AMI GF +G A
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 414 SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGI 472
DA LF ML ++ PN VT+ +L+A H GLVEEG F SMK + P DHY
Sbjct: 389 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYAC 448
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDT 532
MVDL GR G L+EA LI MP +P VWGAL +C LH + ELG+ A IKL+
Sbjct: 449 MVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSH 508
Query: 533 VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G Y+LL+++Y+ WD+ ++R +K + V+K+PG SW +
Sbjct: 509 SGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 286/567 (50%), Gaps = 67/567 (11%)
Query: 8 TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNP 67
+L+ C + +HA IL G+ L ++ P Y I N
Sbjct: 34 SLIHACKDTASLRHVHAQILRRGV--LSSRVAAQLVSCSSLLKSP--DYSLSIFRNSEER 89
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
+ F +IR ++ +F +V ++ M R+G+ P LKS +++ + G ++H
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALH 149
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
D +V+ +L+D+Y+K G + A +VF+E
Sbjct: 150 AATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESP--------------------- 188
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGS 247
D+I + ++ WN +I+GY +A +M A +LF+ MPERN SW+T+I GY+DSG
Sbjct: 189 ------DRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGE 242
Query: 248 ILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQN 307
+ A+++F+ MP++N VS T+I G+S++GD ++A + +M EK L
Sbjct: 243 LNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGL------------- 289
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
P++ T+A+V+SACS+ G L I +I D G+ LD
Sbjct: 290 --------------------KPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRA 329
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN 427
+ TALVD+YAK G +D A +F + +D+++++AMI G+ ++GR AI+ F QM+
Sbjct: 330 IGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG 389
Query: 428 IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGRAGWLDEA 486
P+ V + +LTA ++ V+ G F+SM+ D + P + HY ++VDLLGRAG L+EA
Sbjct: 390 EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEA 449
Query: 487 YELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANL 546
+EL+ NMP P+ W AL AC+ H E Q+ ++L+ + G Y L +A+
Sbjct: 450 HELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASK 509
Query: 547 GRWDDAKKLRMGVKGKNVIKTPGCSWT 573
G D +K R+ ++ + IK W+
Sbjct: 510 GNIQDVEKRRLSLQKR--IKERSLGWS 534
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 103/253 (40%), Gaps = 25/253 (9%)
Query: 329 PDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
PD+ S+I AC L H + + I G VL +A LV + S D + +
Sbjct: 27 PDESHFISLIHACKDTASLRH---VHAQILRRG-VLSSRVAAQLVSCSSLLKSPDYSLSI 82
Query: 389 FHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLV 448
F +R+ +A+I G N R +++ F ML + P+ +T+ +L + + G
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF- 141
Query: 449 EEGYWCFNSMKDNGLVPLVDHYGI----MVDLLGRAGWLDEAYELIINMPTQPNAD---V 501
W ++ L VD +VD+ + G L A+++ P + + +
Sbjct: 142 ---RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 502 WGALLLA-CRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVK 560
W L+ CR + +A + G +S L Y + G + AK+L +
Sbjct: 199 WNVLINGYCRAKDM----HMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMP 254
Query: 561 GKNVIKTPGCSWT 573
KNV+ SWT
Sbjct: 255 EKNVV-----SWT 262
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 161/465 (34%), Positives = 257/465 (55%), Gaps = 49/465 (10%)
Query: 153 GDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYS 212
GD+ TA K+FDEM E++VVSW ++++G ++G +D+A+ LF ++P KD +WNSM+ GY
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 213 KAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM-------------- 258
+ G +D A LF++MP +N+ SW TMI G + A ++F M
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 259 ----------------------------PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+ S SLIT A + GD + K+FD+
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD---SRKVFDEKV 287
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
+ + + A+++ Y+ N K ++AL +F+ ML+ I P++ T AS +++CS LG L+
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI--LPNQSTFASGLNSCSALGTLDWG 345
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
+ + G+ D + +LV +Y+ SG+++ A +F + K+ +V+++++I G +
Sbjct: 346 KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQH 405
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD--NGLVPLVD 468
GR A +F QM+ N P+ +T+TG+L+A +H G +E+G F M N + +
Sbjct: 406 GRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQ 465
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKL 528
HY MVD+LGR G L EA ELI M +PN VW ALL ACR+H++V+ GE A L
Sbjct: 466 HYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNL 525
Query: 529 ESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
+S + Y LLS+IYA+ GRW + KLR+ +K ++K PG SW
Sbjct: 526 DSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 208/403 (51%), Gaps = 6/403 (1%)
Query: 155 VGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKA 214
+ AR+VF+++ +V + +++GY ++ L +A +LFD++P +DV+SWNSMISG +
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 215 GNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYS 274
G+M+ A LF +MPER++ SW M+ G SG + A +F MP +++ + +M+ GY
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 275 KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
+ G VD A KLF QM K+++S+ MI QN + EAL+LF ML+ I T
Sbjct: 171 QFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFT- 229
Query: 335 ASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK 394
VI+AC+ + I G + +++++ +L+ YA I + ++F
Sbjct: 230 -CVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
+ ++A++ G+ +N + DA+ +F ML +I PN T+ L + + G ++ G
Sbjct: 289 EQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 455 FNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNN 514
GL +V + +G +++A + I + + W ++++ C H
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVS-WNSIIVGCAQHGR 407
Query: 515 VELGEIAVQHCIKL--ESDTVGYYSLLSSIYANLGRWDDAKKL 555
+ + I+L E D + + LLS+ ++ G + +KL
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSAC-SHCGFLEKGRKL 449
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/602 (28%), Positives = 308/602 (51%), Gaps = 85/602 (14%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
+ + + + D +W ++ + G + +AV L+ +MQ G + L+ C+
Sbjct: 41 FANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
+ G IHG V LG ++ V + +L+ +YS+ G + +RKVF+ M ++N+ SWNS
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNS 160
Query: 176 LLSGYLKAGDLDEAQHLFDKIP----GKDVISWNSMISGYSKAG---------------- 215
+LS Y K G +D+A L D++ D+++WNS++SGY+ G
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAG 220
Query: 216 ---NMDQANSLFQKMPE---------------RNLASWN-----TMIAGYIDSGSILSAR 252
+ +SL Q + E RN ++ T+I YI +G + AR
Sbjct: 221 LKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR 280
Query: 253 EVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNS 308
VFD M +N V+ ++++G S + + A L +M+++ D +++N++ + YA
Sbjct: 281 MVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGV------ 362
KP++AL++ M E V P+ ++ ++ S CS+ G+ + + + + GV
Sbjct: 341 KPEKALDVIGKM--KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 363 -----------------------------VLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+ D ++ATALVD+Y KSG + A E+F G++
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
+ L +++ M+ G+ + GR + I F ML + P+ +T+T +L+ ++GLV+EG+
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK 518
Query: 454 CFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLH 512
F+ M+ G++P ++H MVDLLGR+G+LDEA++ I M +P+A +WGA L +C++H
Sbjct: 519 YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Query: 513 NNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
++EL EIA + LE Y ++ ++Y+NL RW+D +++R ++ V SW
Sbjct: 579 RDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSW 638
Query: 573 TQ 574
Q
Sbjct: 639 IQ 640
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 228/462 (49%), Gaps = 25/462 (5%)
Query: 123 GVSIHGQVHVLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G++IHG + G D V +A + Y + +G A K+FDEM +++ ++WN ++ L
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNS-MISGYSKAGNMD------QANSLFQKMP-ERNLA 233
++G+ ++A LF ++ +++S M+ N + Q + ++ E N++
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD--- 290
N++I Y +G + +R+VF++M RN S ++++ Y+K G VD A L D+M+
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 291 -EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
+ D++++N++++ YA K+A+ + M + P +++S++ A ++ G L+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRM--QIAGLKPSTSSISSLLQAVAEPGHLKL 243
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
+ I +I + D ++ T L+D+Y K+G + A +F + +++VA+++++ G
Sbjct: 244 GKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSY 303
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDH 469
DA L +M E I P+ +T+ + + Y G E+ MK+ G+ P V
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 470 YGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALL--LAC--RLHNNVELGEIAV 522
+ + + G A ++ I M + PNA LL L C LH+ E+ +
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCL 423
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNV 564
+ + ++ + L +Y G A ++ G+K K++
Sbjct: 424 RKNLICDAYVA---TALVDMYGKSGDLQSAIEIFWGIKNKSL 462
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 273/537 (50%), Gaps = 61/537 (11%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
Y + ++ P + W +IR +S +A+ Y +M R G P LK+C+
Sbjct: 59 YARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS 118
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
++D G +HG V G++ +YV T LL +Y G+V +V
Sbjct: 119 GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRV-------------- 164
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASW 235
F+ IP +V++W S+ISG+ A F++M + +
Sbjct: 165 -----------------FEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKAN 207
Query: 236 NTMIAGYI----DSGSILSAR------------EVFDAMPKRNSVSLITMIAGYSKSGDV 279
T++ + I++ + F + N + ++I Y+K GD+
Sbjct: 208 ETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDL 267
Query: 280 DSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVIS 339
+A LFD M E+ L+S+N++I Y+QN +EAL +F ML ++ + PDK+T SVI
Sbjct: 268 RTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTFLSVIR 325
Query: 340 A-----CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK 394
A CSQLG + I ++++ G V D + ALV++YAK+G + A + F L K
Sbjct: 326 ASMIQGCSQLG-----QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK 380
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGE-NIGPNLVTYTGILTAYNHAGLVEEGYW 453
+D +A++ +I G +G ++A+ +F++M + N P+ +TY G+L A +H GLVEEG
Sbjct: 381 KDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQR 440
Query: 454 CFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLH 512
F M+D +GL P V+HYG MVD+L RAG +EA L+ MP +PN ++WGALL C +H
Sbjct: 441 YFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 500
Query: 513 NNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
N+EL + + E G Y LLS+IYA GRW D K +R +K K V K G
Sbjct: 501 ENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLG 557
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 188/584 (32%), Positives = 304/584 (52%), Gaps = 56/584 (9%)
Query: 6 LTTLMKKCSTL---NHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYV--HPI 60
L+T++ CS L KQIHAHIL GL L ++L +++Y + H +
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLM--NVL---IDSYVKCGRVIAAHKL 306
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ + N + SW ++ + Q EA+ L+ M + GL P +A SS L SCA
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA----- 361
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
+H LG+ T V+ Y+ ++G V NSL+ Y
Sbjct: 362 --------SLHALGFGTQVHA-------YTIKANLGNDSYVT-----------NSLIDMY 395
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGN---MDQANSLFQKMPER----NLA 233
K L +A+ +FD DV+ +N+MI GYS+ G + +A ++F+ M R +L
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLL 455
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
++ +++ S+ ++++ M K + + +I YS + + +FD+M
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELF-NYMLKPEINVHPDKMTLASVISACSQLGDLE 348
KDL+ +N+M A Y Q S+ +EAL LF L E PD+ T A++++A L ++
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE---RPDEFTFANMVTAAGNLASVQ 572
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
+ + G+ + ++ AL+D+YAK GS + A++ F RD+V ++++I +
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYA 632
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVD 468
+G A+++ E+M+ E I PN +T+ G+L+A +HAGLVE+G F M G+ P +
Sbjct: 633 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETE 692
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKL 528
HY MV LLGRAG L++A ELI MPT+P A VW +LL C NVEL E A + I
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILS 752
Query: 529 ESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+ G +++LS+IYA+ G W +AKK+R +K + V+K PG SW
Sbjct: 753 DPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSW 796
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 227/497 (45%), Gaps = 63/497 (12%)
Query: 4 TKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSH--YVHPIL 61
+L L L++ +H I++ GL ++ +IL +N Y Y +
Sbjct: 48 ARLLQLRASDDLLHYQNVVHGQIIVWGLEL--DTYLSNIL---INLYSRAGGMVYARKVF 102
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGL-CPTSHAISSALKSCARIQDK 120
+ + SW ++ + G + E++ ++++ R P + +SS +++C+ + +
Sbjct: 103 EKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGR 162
Query: 121 LGGVSIHGQVHVL--GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
+ Q ++ G+D VYV T L+D Y
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFY----------------------------- 193
Query: 179 GYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTM 238
LK G++D A+ +FD +P K ++W +MISG K G + LF ++ E N+ +
Sbjct: 194 --LKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYI 251
Query: 239 IAGYIDSGSILSARE--------VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
++ + + SIL E + + ++ + +I Y K G V +AHKLF+ M
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP 311
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
K+++S+ +++ Y QN+ KEA+ELF M K + PD +S++++C+ L L
Sbjct: 312 NKNIISWTTLLSGYKQNALHKEAMELFTSMSK--FGLKPDMYACSSILTSCASLHALGFG 369
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGF--- 407
+ ++ + D ++ +L+D+YAK + A ++F D+V ++AMI G+
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV 467
G +A+ +F M I P+L+T+ +L A A L G S + +GL+
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGL----SKQIHGLMF-- 481
Query: 468 DHYGIMVDLLGRAGWLD 484
YG+ +D+ + +D
Sbjct: 482 -KYGLNLDIFAGSALID 497
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 123/240 (51%), Gaps = 4/240 (1%)
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
+I YS++G + A K+F++M E++L+S++ M++ + +E+L +F + +
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD-S 143
Query: 329 PDKMTLASVISACSQLGDLEHWR--WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
P++ L+S I ACS L W ++S + G D ++ T L+D Y K G+ID A
Sbjct: 144 PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYAR 203
Query: 387 ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
+F L ++ V ++ MI G GR+ +++LF Q++ +N+ P+ + +L+A +
Sbjct: 204 LVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILP 263
Query: 447 LVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+E G + GL +++D + G + A++L MP + N W LL
Sbjct: 264 FLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK-NIISWTTLL 322
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/468 (34%), Positives = 267/468 (57%), Gaps = 18/468 (3%)
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G IH + G+ + + LL L+ K G + AR+VFDE+ + + ++N ++SGYL
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 182 KAGDLDEAQHLFDKIP--GKDVISWN-SMI--SGYSKAGNMDQANSLFQKMPERNLAS-- 234
K G + E L ++ G+ + SM+ + S+ M SL + + R +
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 235 ------WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQ 288
++ Y+ SG + SAR VF+ M N V +MI+GY G V+ A ++F+
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 289 MDEKDLLSYNAMIACYAQNSK-PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
KD++ YNAM+ ++++ + K +++++ M + HP+ T ASVI ACS L
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRA--GFHPNISTFASVIGACSVLTSH 289
Query: 348 EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGF 407
E + + + I GV + ++L+D+YAK G I+ A +F ++++++ ++++MI G+
Sbjct: 290 EVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGY 349
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPL 466
G NG +A++LF +M I PN VT+ G L+A +H+GLV++GY F SM +D + P
Sbjct: 350 GKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPK 409
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCI 526
++HY +VDL+GRAG L++A+E MP +P++D+W ALL +C LH NVEL IA
Sbjct: 410 MEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Query: 527 KLESDT-VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
KL +D G Y LS++YA+ +WD+ K+R +K + + KT G SWT
Sbjct: 470 KLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 196/410 (47%), Gaps = 57/410 (13%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHI---LINGLHHLEPLFIHHILLWDVNNYKPLSHYVH 58
++ KL L KC L++A+Q+ + ++ +++ ++ H L+ K L V
Sbjct: 71 ISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLV------KELLLLVQ 124
Query: 59 PILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQ 118
+ ++ D ++ V++ + +G + LC HA +K +
Sbjct: 125 RMSYSGEKADGYTLSMVLKASNSRGS--------TMILPRSLCRLVHA--RIIKCDVELD 174
Query: 119 DKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
D L TAL+D Y K G + +AR VF+ M ++NVV S++S
Sbjct: 175 DVL--------------------ITALVDTYVKSGKLESARTVFETMKDENVVCCTSMIS 214
Query: 179 GYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQAN-SLFQKMPERNLASWNT 237
GY+ G +++A+ +F+ KD++ +N+M+ G+S++G + + ++ M +
Sbjct: 215 GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 238 MIAGYIDSGSILSAREV---FDAMPKRNSV--------SLITMIAGYSKSGDVDSAHKLF 286
A I + S+L++ EV A ++ V SL+ M Y+K G ++ A ++F
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM---YAKCGGINDARRVF 331
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
DQM EK++ S+ +MI Y +N P+EALELF M E + P+ +T +SACS G
Sbjct: 332 DQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRM--KEFRIEPNYVTFLGALSACSHSGL 389
Query: 347 LEH-WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
++ + ES D+ + +VDL ++G ++KA+E + +R
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 136/266 (51%), Gaps = 17/266 (6%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIE-AVSLYVQMQRMGLCPTSHAISSALKSCARIQ 118
I + D + ++ FS+ G+ + +V +Y+ MQR G P +S + +C+ +
Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLT 287
Query: 119 DKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
G +H Q+ G T + + ++LLD+Y+K G + AR+VFD+M EKNV SW S++
Sbjct: 288 SHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMID 347
Query: 179 GYLKAGDLDEAQHLFDKIP----GKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS 234
GY K G+ +EA LF ++ + +++ +S S +G +D+ +F+ M +R+ +
Sbjct: 348 GYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESM-QRDYSM 406
Query: 235 WNTM--IAGYID----SGSILSAREVFDAMPKRNSVSL-ITMIAGYSKSGDVD----SAH 283
M A +D +G + A E AMP+R + +++ + G+V+ +A
Sbjct: 407 KPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAAS 466
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSK 309
+LF +K +Y A+ YA N K
Sbjct: 467 ELFKLNADKRPGAYLALSNVYASNDK 492
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/574 (30%), Positives = 297/574 (51%), Gaps = 71/574 (12%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQM----------------------------QRMG 99
D +SW V+ F++ G+ A L+ M + +
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN 182
Query: 100 LCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTAR 159
+ +++ LK+CA ++ G IH Q+ + G + + ++L+++Y+K GD+ A
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 160 KVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMD- 218
+ +++ E + S ++L+SGY G ++E++ LFD+ + VI WNSMISGY A NM
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY-IANNMKM 301
Query: 219 QANSLFQKM------PERNLAS--------------------------------WNTMIA 240
+A LF +M R LA+ +T++
Sbjct: 302 EALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLD 361
Query: 241 GYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAM 300
Y GS + A ++F + +++ L +MI Y G +D A ++F++++ K L+S+N+M
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSM 421
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
++QN E LE F+ M K +++ D+++L+SVISAC+ + LE + +
Sbjct: 422 TNGFSQNGCTVETLEYFHQMHK--LDLPTDEVSLSSVISACASISSLELGEQVFARATIV 479
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
G+ D ++++L+DLY K G ++ +F + K D V +++MI G+ NG+ +AI LF
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLF 539
Query: 421 EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGR 479
++M I P +T+ +LTA N+ GLVEEG F SMK D+G VP +H+ MVDLL R
Sbjct: 540 KKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLAR 599
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
AG+++EA L+ MP + +W ++L C + +G+ A + I+LE + Y L
Sbjct: 600 AGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQL 659
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
S+I+A G W+ + +R ++ NV K PG SWT
Sbjct: 660 SAIFATSGDWESSALVRKLMRENNVTKNPGSSWT 693
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 187/387 (48%), Gaps = 74/387 (19%)
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG 198
V V LL +YS+ G +G AR +FDEM ++N SWN+++ GY+ +G+ + FD +P
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM 258
+D SWN ++SG++KAG + A LF MPE+++ + N+++ GYI +G A +F +
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 259 P-KRNSVSLITMIAG-----------------------------------YSKSGD---- 278
++++L T++ Y+K GD
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 279 ---------------------------VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPK 311
V+ + LFD+ + ++ +N+MI+ Y N+
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATA 371
EAL LFN M D TLA+VI+AC LG LE + + H FG++ D +A+
Sbjct: 302 EALVLFNEMRNE---TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 372 LVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPN 431
L+D+Y+K GS +A +LF + D + ++MI + GR DA ++FE++ EN +
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERI--EN--KS 414
Query: 432 LVTYTGILTAYNHAGLVEEGYWCFNSM 458
L+++ + ++ G E F+ M
Sbjct: 415 LISWNSMTNGFSQNGCTVETLEYFHQM 441
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 198/380 (52%), Gaps = 40/380 (10%)
Query: 201 VISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK 260
VI N ++ YS++G M A +LF +MP+RN SWNTMI GY++SG ++ FD MP+
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 261 RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM 320
R+ S +++G++K+G++ A +LF+ M EKD+++ N+++ Y N +EAL LF
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLF--- 178
Query: 321 LKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSG 380
E+N D +TL +V+ AC++L L+ + I + I GV D + ++LV++YAK G
Sbjct: 179 --KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
Query: 381 SIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
+ A + +R+ D + SA+I G+ GR +++ LF++ + + + +++
Sbjct: 237 DLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCV----ILWNSMIS 292
Query: 441 AYNHAGLVEEGYWCFNSMK-----DNGLVPLVDHYGIMVDLL----------GRAGWLDE 485
Y + E FN M+ D+ + V + I + L + G +D
Sbjct: 293 GYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLID- 351
Query: 486 AYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYAN 545
++++ G+ + AC+L + VE DT+ S++ +Y +
Sbjct: 352 --DIVVASTLLDMYSKCGSPMEACKLFSEVE------------SYDTILLNSMI-KVYFS 396
Query: 546 LGRWDDAKKLRMGVKGKNVI 565
GR DDAK++ ++ K++I
Sbjct: 397 CGRIDDAKRVFERIENKSLI 416
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 232/506 (45%), Gaps = 51/506 (10%)
Query: 3 ATKLTTLMKKCSTLNH---AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHP 59
A LTT++K C+ L KQIHA ILI G+ + + ++ ++ Y
Sbjct: 187 AITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY--- 243
Query: 60 ILHNLHNPDSFSWGCVI-------RFFSQKGQF------------------------IEA 88
+L + PD S +I R +G F +EA
Sbjct: 244 MLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEA 303
Query: 89 VSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDL 148
+ L+ +M R S +++ + +C + G +H G + V + LLD+
Sbjct: 304 LVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDM 362
Query: 149 YSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMI 208
YSK G A K+F E+ + + NS++ Y G +D+A+ +F++I K +ISWNSM
Sbjct: 363 YSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMT 422
Query: 209 SGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI- 267
+G+S+ G + F +M + +L + ++ I + + +S+ E+ + + R ++ +
Sbjct: 423 NGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLD 482
Query: 268 -------TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM 320
++I Y K G V+ ++FD M + D + +N+MI+ YA N + EA++LF M
Sbjct: 483 SDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKM 542
Query: 321 LKPEINVHPDKMTLASVISACSQLGDLEHWRWI-ESHINDFGVVLDDHLATALVDLYAKS 379
+ P ++T V++AC+ G +E R + ES D G V D + +VDL A++
Sbjct: 543 --SVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 380 GSIDKAYELFHGLR-KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGI 438
G +++A L + D +S+++ G NG + K E+++ E N V Y +
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKII-ELEPENSVAYVQL 659
Query: 439 LTAYNHAGLVEEGYWCFNSMKDNGLV 464
+ +G E M++N +
Sbjct: 660 SAIFATSGDWESSALVRKLMRENNVT 685
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 254/445 (57%), Gaps = 30/445 (6%)
Query: 154 DVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEA--------QHLFDKIPGKDVISWN 205
D+ A K+F++M ++N SWN+++ G+ ++ D D+A + + D+ + ++
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSES-DEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVF------ 255
S++ +K G + + + + + ++ Y+ G + AR +F
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 256 -------DAMPKRNSVSL-ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQN 307
D + + L MI GY + GD +A LFD+M ++ ++S+N MI+ Y+ N
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
K+A+E+F M K +I P+ +TL SV+ A S+LG LE W+ + D G+ +DD
Sbjct: 253 GFFKDAVEVFREMKKGDI--RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN 427
L +AL+D+Y+K G I+KA +F L + +++ +SAMI GF I+G+A DAI F +M
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 428 IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEA 486
+ P+ V Y +LTA +H GLVEEG F+ M +GL P ++HYG MVDLLGR+G LDEA
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 487 YELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANL 546
E I+NMP +P+ +W ALL ACR+ NVE+G+ + + G Y LS++YA+
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQ 490
Query: 547 GRWDDAKKLRMGVKGKNVIKTPGCS 571
G W + ++R+ +K K++ K PGCS
Sbjct: 491 GNWSEVSEMRLRMKEKDIRKDPGCS 515
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 204/430 (47%), Gaps = 36/430 (8%)
Query: 13 CSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSH----YVHPILHNLHNPD 68
C T+ QIHA + I + L IL + + L H Y H I + + +
Sbjct: 33 CRTIRDLSQIHA-VFIKSGQMRDTLAAAEILRFCATS--DLHHRDLDYAHKIFNQMPQRN 89
Query: 69 SFSWGCVIRFFSQ--KGQFIEAVSLYVQMQRMGLC-PTSHAISSALKSCARIQDKLGGVS 125
FSW +IR FS+ + + + A++L+ +M P S LK+CA+ G
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVF-DEMAEKN-------------VV 171
IHG G+ +V + L+ +Y G + AR +F + EK+ +V
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIV 209
Query: 172 SWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERN 231
WN ++ GY++ GD A+ LFDK+ + V+SWN+MISGYS G A +F++M + +
Sbjct: 210 LWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD 269
Query: 232 LASWNTMIAGYIDSGSILSAREV--------FDAMPKRNSVSLITMIAGYSKSGDVDSAH 283
+ + + + S L + E+ D+ + + V +I YSK G ++ A
Sbjct: 270 IRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAI 329
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
+F+++ +++++++AMI +A + + +A++ F M + V P + ++++ACS
Sbjct: 330 HVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA--GVRPSDVAYINLLTACSH 387
Query: 344 LGDLEH-WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYS 401
G +E R+ ++ G+ +VDL +SG +D+A E + K D V +
Sbjct: 388 GGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWK 447
Query: 402 AMIYGFGING 411
A++ + G
Sbjct: 448 ALLGACRMQG 457
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 299/582 (51%), Gaps = 28/582 (4%)
Query: 8 TLMKKCSTLNHAKQIHAHIL-INGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH- 65
L++ C++ N KQ+ A I+ N + P+ ++ + Y + N
Sbjct: 39 VLLENCNSRNQFKQVLAQIMRFNLICDTFPM--SRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
NP+ F + +I S E LY M R + P +K+ + + +
Sbjct: 97 NPNVFVYNTMISAVSSSKN--ECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQ 151
Query: 126 IHGQVHVLGYDTCV----YVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
IH + V G C+ Y+ +L+ Y ++G+ G A KVF M +V S+N ++ GY
Sbjct: 152 IHCHIIVSG---CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYA 208
Query: 182 KAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKMPER------N 231
K G EA L+ K+ D + S++ ++ + + R N
Sbjct: 209 KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 232 LASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
L N ++ Y A+ FDAM K++ S TM+ G+ + GD+++A +FDQM +
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPK 328
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+DL+S+N+++ Y++ + + Y + V PD++T+ S+IS + G+L H R
Sbjct: 329 RDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGR 388
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
W+ + + D L++AL+D+Y K G I++A+ +F ++D+ +++MI G +G
Sbjct: 389 WVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHG 448
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHY 470
A++LF +M E + PN VT +LTA +H+GLVEEG FN MKD G P +HY
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHY 508
Query: 471 GIMVDLLGRAGWLDEAYELI-INMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLE 529
G +VDLL RAG ++EA +++ MP +P+ +WG++L ACR ++E E+A+ +KLE
Sbjct: 509 GSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLE 568
Query: 530 SDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+ G Y LLS+IYA +GRW + K R ++ + V KT G S
Sbjct: 569 PEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 250/473 (52%), Gaps = 48/473 (10%)
Query: 145 LLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV--- 201
L+ Y+ + DV +ARKVFDE+ E+NV+ N ++ Y+ G E +F + G +V
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 202 ------------------------------------ISWNSMISGYSKAGNMDQANSLFQ 225
N ++S Y K G + +A +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 226 KMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITMIAGYSKSG--DV 279
+M R++ SWN+++ GY + A EV M ++ ++ +++ S + +V
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 280 DSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVIS 339
+F +M +K L+S+N MI Y +N+ P EA+EL++ M PD +++ SV+
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD--GFEPDAVSITSVLP 317
Query: 340 ACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA 399
AC L + I +I ++ + L AL+D+YAK G ++KA ++F ++ RD+V+
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
++AMI +G +GR DA+ LF ++ + P+ + + L A +HAGL+EEG CF M
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 460 DN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELG 518
D+ + P ++H MVDLLGRAG + EAY I +M +PN VWGALL ACR+H++ ++G
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 519 EIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+A +L + GYY LLS+IYA GRW++ +R +K K + K PG S
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 167/365 (45%), Gaps = 50/365 (13%)
Query: 75 VIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLG 134
+IR + G + E V ++ M + P + LK+C+ + G IHG +G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 135 YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFD 194
+ ++V L+ +Y K G + AR V DEM+ ++VVSWNSL+ GY + D+A +
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 195 KIP----GKDVISWNSMISGYSKAG--NMDQANSLFQKMPERNLASWNTMIAGYIDSGSI 248
++ D + S++ S N+ +F KM +++L SWN MI Y+ +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMP 290
Query: 249 LSAREVFDAMP----KRNSVSLITMIAG-------------------------------- 272
+ A E++ M + ++VS+ +++
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 350
Query: 273 ---YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
Y+K G ++ A +F+ M +D++S+ AMI+ Y + + +A+ LF+ + + + P
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKL--QDSGLVP 408
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD--DHLATALVDLYAKSGSIDKAYE 387
D + + ++ACS G LE R + D + +HLA +VDL ++G + +AY
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLA-CMVDLLGRAGKVKEAYR 467
Query: 388 LFHGL 392
+
Sbjct: 468 FIQDM 472
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 22/364 (6%)
Query: 223 LFQKMPERNLASWNTMIAGYIDSGSILS--AREVFDAMPKRNSVSLITMIAGYSKSGDVD 280
L QK P+ + ++ Y D ++ + +R + + + + NS + ++ Y+ DV
Sbjct: 33 LDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDL-RCNSSLGVKLMRAYASLKDVA 91
Query: 281 SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA 340
SA K+FD++ E++++ N MI Y N E +++F M NV PD T V+ A
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCG--CNVRPDHYTFPCVLKA 149
Query: 341 CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAY 400
CS G + R I G+ + LV +Y K G + +A + + +RD+V++
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW--CFNSM 458
++++ G+ N R DA+++ +M I + T +L A ++ Y F M
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
Query: 459 KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT---QPNADVWGALLLACRLHNNV 515
LV + +M+ + + EA EL M +P+A ++L AC + +
Sbjct: 270 GKKSLVS----WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 516 ELGEIAVQHCIKLES--DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
LG+ + I+ + + + L +YA G + A+ + +K ++V+ SWT
Sbjct: 326 SLGK-KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV-----SWT 379
Query: 574 QRVS 577
+S
Sbjct: 380 AMIS 383
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
YV + + SW +I + + +EAV LY +M+ G P + +I+S L +C
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
G IHG + + ++ AL+D+Y+K G + AR VF+ M ++VVSW +
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE 229
++S Y +G +A LF K+ D I++ + ++ S AG +++ S F+ M +
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD 438
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 284/531 (53%), Gaps = 21/531 (3%)
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLY---------VQMQRMGLCPTSHAISSALKS 113
NP+ G V+ + +F EA+ + VQ+ P + + ++
Sbjct: 35 KFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQV 94
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSW 173
C++ + G +H + G+ + + LL +Y+K G + ARKVFDEM +++ SW
Sbjct: 95 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW 154
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQA---NSLFQKMP-- 228
N +++GY + G L+EA+ LFD++ KD SW +M++GY K ++A SL Q++P
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 229 ERNLASWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITMIAGYSKSGDVDSAHK 284
N+ + + +A I +E+ + + + V +++ Y K G +D A
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 285 LFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
+FD++ EKD++S+ +MI Y ++S+ +E LF+ ++ P++ T A V++AC+ L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS--CERPNEYTFAGVLNACADL 332
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
E + + ++ G +++LVD+Y K G+I+ A + G K DLV+++++I
Sbjct: 333 TTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLI 392
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGL 463
G NG+ +A+K F+ +L P+ VT+ +L+A HAGLVE+G F S+ + + L
Sbjct: 393 GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRL 452
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
DHY +VDLL R+G ++ +I MP +P+ +W ++L C + N++L E A Q
Sbjct: 453 SHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
K+E + Y +++IYA G+W++ K+R ++ V K PG SWT+
Sbjct: 513 ELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTE 563
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 158/334 (47%), Gaps = 24/334 (7%)
Query: 12 KCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFS 71
KC + K+IH HI+ GL E L+ L D+ I + D S
Sbjct: 232 KC--IRRGKEIHGHIVRAGLDSDEVLWSS---LMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLC--PTSHAISSALKSCARIQDKLGGVSIHGQ 129
W +I + + ++ E SL+ ++ +G C P + + L +CA + + G +HG
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSEL--VGSCERPNEYTFAGVLNACADLTTEELGKQVHGY 344
Query: 130 VHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEA 189
+ +G+D + ++L+D+Y+K G++ +A+ V D + ++VSW SL+ G + G DEA
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 190 QHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS-----WNTMIA 240
FD + D +++ +++S + AG +++ F + E++ S + ++
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 241 GYIDSGSILSAREVFDAMPKRNSVSL-ITMIAGYSKSGDVD----SAHKLFDQMDEKDLL 295
SG + V MP + S L +++ G S G++D +A +LF +++ ++ +
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF-KIEPENPV 523
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
+Y M YA K +E ++ M + + P
Sbjct: 524 TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 557
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 153/471 (32%), Positives = 261/471 (55%), Gaps = 10/471 (2%)
Query: 109 SALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK 168
S L+SC I SIH ++ +D +V L+ + S + V A VF ++
Sbjct: 34 SVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP 228
NV + +++ G++ +G + L+ ++ V+ N +I+ KA ++ + ++
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVL 150
Query: 229 ERNLASWNT----MIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHK 284
+ S + M+ Y SG +++A+++FD MP R+ V+ MI YS+ G + A +
Sbjct: 151 KLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALE 210
Query: 285 LFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
LF + KD + + AMI +N + +ALELF M NV ++ T V+SACS L
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME--NVSANEFTAVCVLSACSDL 268
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
G LE RW+ S + + + L + + AL+++Y++ G I++A +F +R +D+++Y+ MI
Sbjct: 269 GALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMI 328
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GL 463
G ++G + +AI F M+ PN VT +L A +H GL++ G FNSMK +
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
P ++HYG +VDLLGR G L+EAY I N+P +P+ + G LL AC++H N+ELGE +
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAK 448
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+ E+ G Y LLS++YA+ G+W ++ ++R ++ + K PGCS +
Sbjct: 449 RLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 226/471 (47%), Gaps = 26/471 (5%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L ++++ C + H IHA I I H + + ++ V + Y + + +
Sbjct: 32 LISVLRSCKNIAHVPSIHAKI-IRTFHDQDAFVVFELI--RVCSTLDSVDYAYDVFSYVS 88
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
NP+ + + +I F G+ + VSLY +M + P ++ I+S LK+C D
Sbjct: 89 NPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCRE 144
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
IH QV LG+ + V ++++Y K G++ A+K+FDEM +++ V+ +++ Y + G
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
+ EA LF + KD + W +MI G + M++A LF++M N+++ + +
Sbjct: 205 IKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSA 264
Query: 246 GSILSAREV---------FDAMPKRNSV--SLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
S L A E+ M N V +LI M YS+ GD++ A ++F M +KD+
Sbjct: 265 CSDLGALELGRWVHSFVENQRMELSNFVGNALINM---YSRCGDINEARRVFRVMRDKDV 321
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE-HWRWI 353
+SYN MI+ A + EA+ F M+ P+++TL ++++ACS G L+
Sbjct: 322 ISYNTMISGLAMHGASVEAINEFRDMVNR--GFRPNQVTLVALLNACSHGGLLDIGLEVF 379
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGINGR 412
S F V +VDL + G +++AY + + D + ++ I+G
Sbjct: 380 NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN 439
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGL 463
K+ +++ E+ P+ TY + Y +G +E SM+D+G+
Sbjct: 440 MELGEKIAKRLF-ESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGI 489
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 128/288 (44%), Gaps = 13/288 (4%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ ++ D+ W +I + + +A+ L+ +MQ + L +C+ +
Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGA 270
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G +H V + +V AL+++YS+ GD+ AR+VF M +K+V+S+N+++SG
Sbjct: 271 LELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISG 330
Query: 180 YLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP-----ER 230
G EA + F + + + ++ ++++ S G +D +F M E
Sbjct: 331 LAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEP 390
Query: 231 NLASWNTMIAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+ + ++ G + A + +P + + + L T+++ G+++ K+ ++
Sbjct: 391 QIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRL 450
Query: 290 DEK---DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
E D +Y + YA + K KE+ E+ M I P T+
Sbjct: 451 FESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTI 498
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 190/695 (27%), Positives = 319/695 (45%), Gaps = 131/695 (18%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
+ KC T++ K IH +L G+ L L H L+ + LSH V +L D
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGILTLN-LTSH--LISTYISVGCLSHAV-SLLRRFPPSD 89
Query: 69 S--FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
+ + W +IR + G + + L+ M + P ++ K+C I G S
Sbjct: 90 AGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 127 HGQVHVLGYDTCVYVQTALLDL-------------------------------YSKMGDV 155
H V G+ + V+V AL+ + Y+K+G
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 156 GTARKVFDEMAE----------------------------------------KNVVSWNS 175
A ++F M +N+ N
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER----N 231
L+ Y K G +DEA +F + KDV+SWN+M++GYS+ G + A LF+KM E +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 232 LASWNTMIAGYIDSG----SILSAREVFDAMPKRNSVSLITMIAG--------------- 272
+ +W+ I+GY G ++ R++ + K N V+LI++++G
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 273 ---------------------------YSKSGDVDSAHKLFDQMD--EKDLLSYNAMIAC 303
Y+K VD+A +FD + E+D++++ MI
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESH-INDFGV 362
Y+Q+ +ALEL + M + + P+ T++ + AC+ L L + I ++ + +
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQ 422
+ ++ L+D+YAK GSI A +F + ++ V +++++ G+G++G +A+ +F++
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 423 MLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGRAG 481
M + VT +L A +H+G++++G FN MK G+ P +HY +VDLLGRAG
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 482 WLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSS 541
L+ A LI MP +P VW A L CR+H VELGE A + +L S+ G Y+LLS+
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 542 IYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQRV 576
+YAN GRW D ++R ++ K V K PGCSW + +
Sbjct: 690 LYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGI 724
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/592 (29%), Positives = 308/592 (52%), Gaps = 57/592 (9%)
Query: 37 LFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQ 96
+F+ + LL + Y + +L P+ S+ VI +++ + +EAV ++ M
Sbjct: 173 IFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMC 232
Query: 97 RMGLCPTSHAISSAL------KSCARIQDKLG---GVSIHGQVHVLGYDTCVYVQTALLD 147
G+ S +S+ L + C + + G G IH LG+ +++ +LL+
Sbjct: 233 EKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLE 292
Query: 148 LYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY--------------------------- 180
+Y+K D+ A +F EM E NVVSWN ++ G+
Sbjct: 293 IYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVT 352
Query: 181 --------LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL 232
++GD++ + +F IP V +WN+M+SGYS + ++A S F++M +NL
Sbjct: 353 CISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNL 412
Query: 233 ASWNTMIAGYIDSGSILSARE--------VFDAMPKRNSVSLITMIAGYSKSGDVDSAHK 284
T ++ + S + L E V +NS + +IA YS+ ++ +
Sbjct: 413 KPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISEC 472
Query: 285 LFDQ-MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
+FD ++E D+ +N+MI+ + N +AL LF M + + + P++ + A+V+S+CS+
Sbjct: 473 IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV-LCPNETSFATVLSSCSR 531
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
L L H R + G V D + TAL D+Y K G ID A + F + +++ V ++ M
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NG 462
I+G+G NGR +A+ L+ +M+ P+ +T+ +LTA +H+GLVE G +SM+ +G
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV 522
+ P +DHY +VD LGRAG L++A +L P + ++ +W LL +CR+H +V L
Sbjct: 652 IEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVA 711
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI-KTPGCSWT 573
+ ++L+ + Y LLS+ Y++L +WDD+ L+ G+ KN + KTPG SWT
Sbjct: 712 EKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQ-GLMNKNRVHKTPGQSWT 762
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 213/426 (50%), Gaps = 34/426 (7%)
Query: 109 SALKSCARIQD-KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE 167
++L C R + KL G IHG + +G + Y+ LLDLY + GD ARKVFDEM+
Sbjct: 10 ASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV 69
Query: 168 KNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM 227
++V SWN+ L+ K GDL EA +FD +P +DV+SWN+MIS + G ++A ++++M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 228 ------PER-NLASWNTMIAGYIDS--GSILSAREVFDAMPKRNSV--SLITMIAGYSKS 276
P R LAS + + +D G V + K V +L++M Y+K
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSM---YAKC 186
Query: 277 G-DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
G VD ++F+ + + + +SY A+I A+ +K EA+++F M + + V D + L+
Sbjct: 187 GFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQV--DSVCLS 244
Query: 336 SVIS------ACSQLGDL---EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
+++S C L ++ E + I G D HL +L+++YAK+ ++ A
Sbjct: 245 NILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAE 304
Query: 387 ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
+F + + ++V+++ MI GFG R+ +++ +M PN VT +L A +G
Sbjct: 305 LIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSG 364
Query: 447 LVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWG 503
VE G F+S+ P V + M+ +EA M Q P+
Sbjct: 365 DVETGRRIFSSIPQ----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 420
Query: 504 ALLLAC 509
+L +C
Sbjct: 421 VILSSC 426
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 145/650 (22%), Positives = 284/650 (43%), Gaps = 110/650 (16%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPIL 61
+ +L L +C ++A+++ + + ++ + D+ +
Sbjct: 43 LCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGE-------ACEVF 95
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
+ D SW +I +KG +A+ +Y +M G P+ ++S L +C+++ D +
Sbjct: 96 DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 155
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMG---DVGTARKVFDEMAEKNVVSWNSLLS 178
G+ HG G D ++V ALL +Y+K G D G +VF+ +++ N VS+ +++
Sbjct: 156 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGV--RVFESLSQPNEVSYTAVIG 213
Query: 179 GYLKAGDLDEAQHLF----------DKIPGKDVISW------------------------ 204
G + + EA +F D + +++S
Sbjct: 214 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHC 273
Query: 205 --------------NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG----YIDSG 246
NS++ Y+K +M+ A +F +MPE N+ SWN MI G Y
Sbjct: 274 LALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDK 333
Query: 247 SILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ 306
S+ + D+ + N V+ I+++ +SGDV++ ++F + + + ++NAM++ Y+
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
+EA+ F M N+ PDK TL+ ++S+C++L LE + I + + +
Sbjct: 394 YEHYEEAISNFRQMQFQ--NLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNS 451
Query: 367 HLATALVDLYAKSGSIDKAYELFHG-LRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLG 425
H+ + L+ +Y++ ++ + +F + + D+ +++MI GF N + A+ LF +M
Sbjct: 452 HIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 426 ENI-GPNLVTYTGILTAYNHA----------GLVEEGYWCFNSMKDNGLVPLVDHYG--- 471
+ PN ++ +L++ + GLV + + +S + L + G
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEID 571
Query: 472 ------------------IMVDLLGRAGWLDEA---YELIINMPTQPNADVWGALLLACR 510
M+ G G DEA Y +I+ +P+ + ++L AC
Sbjct: 572 SARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631
Query: 511 LHNNVELG-EI--AVQ--HCIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
VE G EI ++Q H I+ E D +Y + GR +DA+KL
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEPELD---HYICIVDCLGRAGRLEDAEKL 678
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/661 (27%), Positives = 325/661 (49%), Gaps = 93/661 (14%)
Query: 1 MVATKLTTLMKKCS----TLNHAKQIHAHILINGLHHLEPLFIHHI-LLWDVNNYKPLSH 55
M ++KL +L+++C+ +L K +H IL GL L I + + ++ H
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 56 YVHPILHNLH-NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKS 113
+ N D + W ++ +S+ F + + ++ ++ +C P S + +K+
Sbjct: 61 ----VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSW 173
+ + G IH V GY V V ++L+ +Y+K + +VFDEM E++V SW
Sbjct: 117 YGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIP--------------------------GKDV------ 201
N+++S + ++G+ ++A LF ++ GK++
Sbjct: 177 NTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
Query: 202 -------ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREV 254
++++ Y K ++ A +FQKMP ++L +WN+MI GY+ G S E+
Sbjct: 237 KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEI 296
Query: 255 FDAM------PKRNSVSLITMIAG---------------------------------YSK 275
+ M P + +++ I M Y K
Sbjct: 297 LNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFK 356
Query: 276 SGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
G+ + A +F + + S+N MI+ Y +A+E+++ M+ + V PD +T
Sbjct: 357 CGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS--VGVKPDVVTFT 414
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
SV+ ACSQL LE + I I++ + D+ L +AL+D+Y+K G+ +A+ +F+ + K+
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCF 455
D+V+++ MI +G +G+ +A+ F++M + P+ VT +L+A HAGL++EG F
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
Query: 456 NSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP-TQPNADVWGALLLACRLHN 513
+ M+ G+ P+++HY M+D+LGRAG L EAYE+I P T NA++ L AC LH
Sbjct: 535 SQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHL 594
Query: 514 NVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
LG+ + ++ D Y +L ++YA+ WD A+++R+ +K + K PGCSW
Sbjct: 595 EHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Query: 574 Q 574
+
Sbjct: 655 E 655
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 169/581 (29%), Positives = 296/581 (50%), Gaps = 87/581 (14%)
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
+ W +++ S++ Q+ E + + M R P + + ALK+C +++ G IHG
Sbjct: 26 YQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGF 85
Query: 130 VH---VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
V LG D +YV ++L+ +Y K G + A ++FDE+ + ++V+W+S++SG+ K G
Sbjct: 86 VKKDVTLGSD--LYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSP 143
Query: 187 DEAQHLF-------DKIPGK---------------------------------DVISWNS 206
+A F D P + D+ NS
Sbjct: 144 YQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 207 MISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM------PK 260
+++ Y+K+ +A +LF+ + E+++ SW+T+IA Y+ +G+ A VF+ M P
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPN 263
Query: 261 RNSVSLI---------------------------------TMIAGYSKSGDVDSAHKLFD 287
+V + ++ Y K + A+ +F
Sbjct: 264 VATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFS 323
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
++ KD++S+ A+I+ + N ++E F+ ML E N PD + + V+ +CS+LG L
Sbjct: 324 RIPRKDVVSWVALISGFTLNGMAHRSIEEFSIML-LENNTRPDAILMVKVLGSCSELGFL 382
Query: 348 EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGF 407
E + S++ +G + + +LV+LY++ GS+ A ++F+G+ +D V ++++I G+
Sbjct: 383 EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGY 442
Query: 408 GINGRASDAIKLFEQML-GENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVP 465
GI+G+ + A++ F M+ + PN VT+ IL+A +HAGL+ EG F M D L P
Sbjct: 443 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAP 502
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHC 525
++HY ++VDLLGR G LD A E+ MP P + G LL ACR+H N E+ E +
Sbjct: 503 NLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKL 562
Query: 526 IKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIK 566
+LES+ GYY L+S++Y G W++ +KLR VK + + K
Sbjct: 563 FELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 603
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 171/349 (48%), Gaps = 24/349 (6%)
Query: 158 ARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNM 217
AR++F EM ++++ WN+LL + +E + F + M K N
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHF-----------SHMFRDEEKPDNF 61
Query: 218 DQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
+L + E ++ MI G++ L + + SLI M Y K G
Sbjct: 62 TLPVAL-KACGELREVNYGEMIHGFVKKDVTLGSDLYVGS-------SLIYM---YIKCG 110
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
+ A ++FD++++ D++++++M++ + +N P +A+E F M+ +V PD++TL ++
Sbjct: 111 RMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS-DVTPDRVTLITL 169
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
+SAC++L + R + + G D L +L++ YAKS + +A LF + ++D+
Sbjct: 170 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDV 229
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
+++S +I + NG A++A+ +F M+ + PN+ T +L A A +E+G
Sbjct: 230 ISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHEL 289
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
GL V +VD+ + +EAY + +P + + W AL+
Sbjct: 290 AIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALI 337
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 178/393 (45%), Gaps = 42/393 (10%)
Query: 6 LTTLMKKCSTLNHAKQ---IHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
L TL+ C+ L++++ +H ++ G + L + + LL + V+ +
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSN--DLSLVNSLLNCYAKSRAFKEAVN-LFK 222
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
+ D SW VI + Q G EA+ ++ M G P + L++CA D
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G H G +T V V TAL+D+Y K A VF + K+VVSW +L+SG+
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 183 AG----DLDE-AQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNT 237
G ++E + L + D I ++ S+ G ++QA +++
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAK------------CFHS 390
Query: 238 MIAGY-IDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS 296
+ Y DS + A +++ YS+ G + +A K+F+ + KD +
Sbjct: 391 YVIKYGFDSNPFIGA----------------SLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWRWIES 355
+ ++I Y + K +ALE FN+M+K V P+++T S++SACS G + E R +
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSS-EVKPNEVTFLSILSACSHAGLIHEGLRIFKL 493
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
+ND+ + + LVDL + G +D A E+
Sbjct: 494 MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 235/423 (55%), Gaps = 41/423 (9%)
Query: 191 HLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILS 250
H+ I D++ N++++ Y+K G++++A +F+KMP+R+ +W T+I+GY
Sbjct: 85 HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD 144
Query: 251 AREVFDAM------PKRNSVSLITMIAG-------------------------------- 272
A F+ M P ++S + A
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLD 204
Query: 273 -YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDK 331
Y++ G +D A +FD ++ ++ +S+NA+IA +A+ S ++ALELF ML+ P
Sbjct: 205 LYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD--GFRPSH 262
Query: 332 MTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
+ AS+ ACS G LE +W+ +++ G L L+D+YAKSGSI A ++F
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 392 LRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
L KRD+V++++++ + +G +A+ FE+M I PN +++ +LTA +H+GL++EG
Sbjct: 323 LAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEG 382
Query: 452 YWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRL 511
+ + MK +G+VP HY +VDLLGRAG L+ A I MP +P A +W ALL ACR+
Sbjct: 383 WHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRM 442
Query: 512 HNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
H N ELG A +H +L+ D G + +L +IYA+ GRW+DA ++R +K V K P CS
Sbjct: 443 HKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACS 502
Query: 572 WTQ 574
W +
Sbjct: 503 WVE 505
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 190/394 (48%), Gaps = 57/394 (14%)
Query: 8 TLMKKCSTLN---HAKQIHAHILINGLHHLEPLFIHHILLWD--VNNYKPLS--HYVHPI 60
TL+KKC+ + +HAHIL + +F H I++ + +N Y +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHIL-------QSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ D +W +I +SQ + +A+ + QM R G P +SS +K+ A +
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G +HG G+D+ V+V +ALLDLY++ G + A+ VFD + +N VSWN+L++G+
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 181 LKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQA---NSLFQKMPERNLA 233
+ ++A LF + S+ S+ S G ++Q ++ K E+ +A
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 234 -SWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK 292
+ NT++ Y SGSI AR++FD + KR+ V
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV---------------------------- 329
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWR 351
S+N+++ YAQ+ KEA+ F M + + + P++++ SV++ACS G L E W
Sbjct: 330 ---SWNSLLTAYAQHGFGKEAVWWFEEMRR--VGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
+ E D G+V + +VDL ++G +++A
Sbjct: 385 YYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 7/237 (2%)
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
D+ +++ C+ L R + +HI D + L+++YAK GS+++A ++F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
+ +RD V ++ +I G+ + R DA+ F QML PN T + ++ A
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
G+ G V ++DL R G +D+A +L+ + N W AL+
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA-QLVFDALESRNDVSWNALIAGH 237
Query: 510 RLHNNVELGEIAVQHCIK--LESDTVGYYSLL----SSIYANLGRWDDAKKLRMGVK 560
+ E Q ++ Y SL S+ + G+W A ++ G K
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 280/532 (52%), Gaps = 55/532 (10%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + ++ SW +I F Q G+ AV L+ +M P CA +
Sbjct: 158 LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPL----------CALVAG 207
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
+ + VLG + G + + R E V ++N+L+ G
Sbjct: 208 LIKNERLSEAAWVLG----------------QYGSLVSGR-------EDLVYAYNTLIVG 244
Query: 180 YLKAGDLDEAQHLFDKIPG---------------KDVISWNSMISGYSKAGNMDQANSLF 224
Y + G ++ A+ LFD+IP K+V+SWNSMI Y K G++ A LF
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 225 QKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHK 284
+M +R+ SWNTMI GY+ + A +F MP R++ S M++GY+ G+V+ A
Sbjct: 305 DQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARH 364
Query: 285 LFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM-LKPEINVHPDKMTLASVISACSQ 343
F++ EK +S+N++IA Y +N KEA++LF M ++ E PD TL S++SA +
Sbjct: 365 YFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE---KPDPHTLTSLLSASTG 421
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSA 402
L +L + I V+ D + AL+ +Y++ G I ++ +F ++ KR+++ ++A
Sbjct: 422 LVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNA 480
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-N 461
MI G+ +G AS+A+ LF M I P+ +T+ +L A HAGLV+E F SM
Sbjct: 481 MIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVY 540
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIA 521
+ P ++HY +V++ G +EA +I +MP +P+ VWGALL ACR++NNV L +A
Sbjct: 541 KIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVA 600
Query: 522 VQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
+ +LE ++ Y LL ++YA++G WD+A ++RM ++ K + K G SW
Sbjct: 601 AEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 211/436 (48%), Gaps = 29/436 (6%)
Query: 151 KMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISG 210
+ G + AR +F+++ +N V+WN+++SGY+K ++++A+ LFD +P +DV++WN+MISG
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISG 111
Query: 211 YSKAGN---MDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI 267
Y G +++A LF +MP R+ SWNTMI+GY + I A +F+ MP+RN+VS
Sbjct: 112 YVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWS 171
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV 327
MI G+ ++G+VDSA LF +M KD A++A +N + EA +
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 328 HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA-------------TALVD 374
++I Q G +E R + I D + DDH +++
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPD--LCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 375 LYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVT 434
Y K G + A LF ++ RD ++++ MI G+ R DA LF +M + +
Sbjct: 290 AYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----S 345
Query: 435 YTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP 494
+ +++ Y G VE F + V + ++ + EA +L I M
Sbjct: 346 WNMMVSGYASVGNVELARHYFEKTPEKHTVS----WNSIIAAYEKNKDYKEAVDLFIRMN 401
Query: 495 TQ---PNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDD 551
+ P+ +LL A N+ LG Q +K V ++ L ++Y+ G +
Sbjct: 402 IEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIME 461
Query: 552 AKKLRMGVKGKNVIKT 567
++++ +K K + T
Sbjct: 462 SRRIFDEMKLKREVIT 477
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 193/424 (45%), Gaps = 72/424 (16%)
Query: 149 YSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD---LDEAQHLFDKIPGKDVISWN 205
Y K ++ ARK+FD M +++VV+WN+++SGY+ G L+EA+ LFD++P +D SWN
Sbjct: 81 YVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWN 140
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVS 265
+MISGY+K + +A LF+KMPERN SW+ MI G+ +G + SA +F MP ++S
Sbjct: 141 TMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP 200
Query: 266 LI-------------------------------------TMIAGYSKSGDVDSAHKLFDQ 288
L T+I GY + G V++A LFDQ
Sbjct: 201 LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQ 260
Query: 289 MDE---------------KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
+ + K+++S+N+MI Y + A LF D+M
Sbjct: 261 IPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF------------DQMK 308
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVV--LDDHLATALVDLYAKSGSIDKAYELFHG 391
IS + + H +E F + D H +V YA G+++ A F
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK 368
Query: 392 LRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
++ V+++++I + N +A+ LF +M E P+ T T +L+A GLV
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSA--STGLVNLR 426
Query: 452 YWC-FNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACR 510
+ + ++P V + ++ + R G + E+ + M + W A++
Sbjct: 427 LGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYA 486
Query: 511 LHNN 514
H N
Sbjct: 487 FHGN 490
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 185/389 (47%), Gaps = 62/389 (15%)
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSV 264
N MI ++G + +A +F+K+ RN +WNTMI+GY+ + AR++FD MPKR+ V
Sbjct: 48 NQMI----RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 265 SLITMIAGYSKSGDV---DSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYML 321
+ TMI+GY G + + A KLFD+M +D S+N MI+ YA+N + EAL LF M
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKM- 162
Query: 322 KPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVL-------DDHLATALVD 374
PE N ++ +++I+ Q G++ D VVL D ALV
Sbjct: 163 -PERNA----VSWSAMITGFCQNGEV-----------DSAVVLFRKMPVKDSSPLCALVA 206
Query: 375 LYAKSGSIDKAY-------ELFHGLRKRDLV-AYSAMIYGFGINGRASDAIKLFEQM--- 423
K+ + +A L G + DLV AY+ +I G+G G+ A LF+Q+
Sbjct: 207 GLIKNERLSEAAWVLGQYGSLVSG--REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDL 264
Query: 424 --------LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD 475
E N+V++ ++ AY G V F+ MKD + + M+D
Sbjct: 265 CGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS----WNTMID 320
Query: 476 LLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGY 535
+++A+ L MP + +A W ++ NVEL + E TV +
Sbjct: 321 GYVHVSRMEDAFALFSEMPNR-DAHSWNMMVSGYASVGNVELARHYFEKTP--EKHTVSW 377
Query: 536 YSLLSSIYANLGRWDDAKKL--RMGVKGK 562
S++++ Y + +A L RM ++G+
Sbjct: 378 NSIIAA-YEKNKDYKEAVDLFIRMNIEGE 405
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 227/373 (60%), Gaps = 9/373 (2%)
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSV 264
N++I ++ G++ A+ LF + + +W++M +GY G I A +FD MP ++ V
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
+ MI G K ++DSA +LFD+ EKD++++NAMI+ Y PKEAL +F M +
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM--RD 268
Query: 325 INVHPDKMTLASVISACSQLGDLE-----HWRWIESHINDFGVVLDDHLATALVDLYAKS 379
HPD +T+ S++SAC+ LGDLE H +E+ + + + AL+D+YAK
Sbjct: 269 AGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKC 328
Query: 380 GSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
GSID+A E+F G++ RDL ++ +I G ++ A +I++FE+M + PN VT+ G++
Sbjct: 329 GSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVI 387
Query: 440 TAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN 498
A +H+G V+EG F+ M+D + P + HYG MVD+LGRAG L+EA+ + +M +PN
Sbjct: 388 LACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPN 447
Query: 499 ADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMG 558
A VW LL AC+++ NVELG+ A + + + D G Y LLS+IYA+ G+WD +K+R
Sbjct: 448 AIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKM 507
Query: 559 VKGKNVIKTPGCS 571
V K G S
Sbjct: 508 FDDTRVKKPTGVS 520
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 222/431 (51%), Gaps = 51/431 (11%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLS-HYVHPILHNLHNP 67
L + C + KQIHA +++NGL + L + L++ + P + Y H + + P
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGL--MSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKP 75
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D V+R +Q + + VSLY +M++ G+ P + + LK+C++++ + G + H
Sbjct: 76 DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFH 135
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
G+V G+ YV+ AL+ ++ GD+G A ++FD+ A+ + V+W+S+ SGY K G +D
Sbjct: 136 GKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKID 195
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGS 247
EA LFD++P KD ++WN MI+G K MD A LF + E+++ +WN MI+GY++ G
Sbjct: 196 EAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGY 255
Query: 248 ILSA----REVFDAMPKRNSVSLITMIAG------------------------------- 272
A +E+ DA + V+++++++
Sbjct: 256 PKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 273 ---------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKP 323
Y+K G +D A ++F + ++DL ++N +I A + + ++E+F M +
Sbjct: 316 PIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQR- 373
Query: 324 EINVHPDKMTLASVISACSQLGDLEHWRWIESHIND-FGVVLDDHLATALVDLYAKSGSI 382
+ V P+++T VI ACS G ++ R S + D + + + +VD+ ++G +
Sbjct: 374 -LKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 383 DKAYELFHGLR 393
++A+ ++
Sbjct: 433 EEAFMFVESMK 443
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 178/601 (29%), Positives = 286/601 (47%), Gaps = 86/601 (14%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEA---VSLYVQMQRMGLCPTSHAISSALKSC 114
H I + + D SW +I +SQ G + + L+ +M+ + P ++ ++ K+
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 115 ARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
+ +Q G H V + +YV T+L+ +Y K G V KVF M E+N +W+
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 175 SLLSGYLKAGDLDEAQHLF-----DKIPGKD----------------------------- 200
+++SGY G ++EA +F +K G D
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 201 -------VISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSARE 253
V N++++ YSK ++++A +F +RN +W+ M+ GY +G L A +
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 254 VFDAM------P---------------------------------KRNSVSLITMIAGYS 274
+F M P +R+ + ++ Y+
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYA 368
Query: 275 KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
K+G + A K FD + E+D+ + ++I+ Y QNS +EAL L+ M + P+ T+
Sbjct: 369 KAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM--KTAGIIPNDPTM 426
Query: 335 ASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK 394
ASV+ ACS L LE + + H G L+ + +AL +Y+K GS++ +F
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN 486
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
+D+V+++AMI G NG+ +A++LFE+ML E + P+ VT+ I++A +H G VE G++
Sbjct: 487 KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFY 546
Query: 455 FNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHN 513
FN M D GL P VDHY MVDLL RAG L EA E I + +W LL AC+ H
Sbjct: 547 FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
Query: 514 NVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
ELG A + + L S Y LS IY LGR D +++ ++ V K GCSW
Sbjct: 607 KCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Query: 574 Q 574
+
Sbjct: 667 E 667
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 136/586 (23%), Positives = 243/586 (41%), Gaps = 143/586 (24%)
Query: 100 LCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTAR 159
L P + + L ++ ++ + G ++HGQ+ G TC+ L++ Y+K G + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 160 KVFDEMAEKNVVSWNSLLSGYLKAGDLDEA---QHLFDKIPGKDVISW------------ 204
+F+ + K+VVSWNSL++GY + G + + LF ++ +D++
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 205 ---------------------------NSMISGYSKAGNMDQANSLFQKMPERNLASWNT 237
S++ Y KAG ++ +F MPERN +W+T
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 238 MIAGYIDSGSILSAREVFDAMPKRN----------------------------------- 262
M++GY G + A +VF+ +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 263 ---------SVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEA 313
S +L+TM YSK ++ A K+FD +++ ++++AM+ Y+QN + EA
Sbjct: 250 NGLLGFVALSNALVTM---YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEA 306
Query: 314 LELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALV 373
++LF+ M I P + T+ V++ACS + LE + + S + G TALV
Sbjct: 307 VKLFSRMFSAGIK--PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV 364
Query: 374 DLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLV 433
D+YAK+G + A + F L++RD+ ++++I G+ N +A+ L+ +M I PN
Sbjct: 365 DMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP 424
Query: 434 TYTGIL-----------------------------------TAYNHAGLVEEGYWCFNSM 458
T +L T Y+ G +E+G F
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRT 484
Query: 459 KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM---PTQPNADVWGALLLACRLHNNV 515
+ +V + M+ L G DEA EL M +P+ + ++ AC V
Sbjct: 485 PNKDVVS----WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFV 540
Query: 516 ELGEIAVQHCIKLESDTVG------YYSLLSSIYANLGRWDDAKKL 555
E G + SD +G +Y+ + + + G+ +AK+
Sbjct: 541 ERGWFY----FNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEF 582
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 115/256 (44%), Gaps = 26/256 (10%)
Query: 324 EINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSID 383
+ ++P TL ++ SQ +L R + I G A LV+ YAK G +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 384 KAYELFHGLRKRDLVAYSAMIYGFGINGRASDA---IKLFEQMLGENIGPNLVTYTGILT 440
KA+ +F+ + +D+V+++++I G+ NG S + ++LF +M ++I PN T GI
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 441 AYNHAGLVEEGYWCFNSMKDNGLVPLVDHYG-IMVD--LLG---RAGWLDEAYELIINMP 494
A + G + + LV + +G I VD L+G +AG +++ ++ MP
Sbjct: 127 AESSLQSSTVG------RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 495 TQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD---------TVGYYSLLSSIYAN 545
+ N W ++ VE I V + E + T SL ++IY
Sbjct: 181 -ERNTYTWSTMVSGYATRGRVEEA-IKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 546 LGRWDDAKKLRMGVKG 561
LGR ++ G+ G
Sbjct: 239 LGRQIHCITIKNGLLG 254
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 214/335 (63%), Gaps = 3/335 (0%)
Query: 242 YIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMI 301
Y G ++SA++VFD MP+R+ VS MI Y+K G+V++A LFD M E+D++S+N MI
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 302 ACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFG 361
YAQ+ P +AL LF +L E PD++T+ + +SACSQ+G LE RWI +
Sbjct: 231 DGYAQHGFPNDALMLFQKLL-AEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSR 289
Query: 362 VVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFE 421
+ L+ + T L+D+Y+K GS+++A +F+ ++D+VA++AMI G+ ++G + DA++LF
Sbjct: 290 IRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFN 349
Query: 422 QMLG-ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGR 479
+M G + P +T+ G L A HAGLV EG F SM ++ G+ P ++HYG +V LLGR
Sbjct: 350 EMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGR 409
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
AG L AYE I NM ++ +W ++L +C+LH + LG+ ++ I L G Y LL
Sbjct: 410 AGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLL 469
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
S+IYA++G ++ K+R +K K ++K PG S +
Sbjct: 470 SNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIE 504
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 236/472 (50%), Gaps = 19/472 (4%)
Query: 5 KLTTLMKKCSTLNHAKQIHAHILI-NGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
KL L+ K +++ QIHA IL N L H ++ L ++ + H + + H
Sbjct: 31 KLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSL-ALFHQ 89
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
+PD F + I S G +A LYVQ+ + P SS LKSC+ KL
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKL-- 147
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
IH V G YV T L+D+Y+K GDV +A+KVFD M E+++VS ++++ Y K
Sbjct: 148 --IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 184 GDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM-----PERNLASWNTM 238
G+++ A+ LFD + +D++SWN MI GY++ G + A LFQK+ P+ + +
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 239 IAGYIDSGSILSAR--EVFDAMPK-RNSVSLIT-MIAGYSKSGDVDSAHKLFDQMDEKDL 294
++ G++ + R VF + R +V + T +I YSK G ++ A +F+ KD+
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWRWI 353
+++NAMIA YA + ++AL LFN M + + P +T + AC+ G + E R
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEM-QGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 384
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGINGR 412
ES ++G+ LV L ++G + +AYE + D V +S+++ ++G
Sbjct: 385 ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV 464
++ E ++G NI N Y + Y G E N MK+ G+V
Sbjct: 445 FVLGKEIAEYLIGLNI-KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIV 495
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 177/592 (29%), Positives = 295/592 (49%), Gaps = 92/592 (15%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRM----GLCPTSHAISSALKSCARIQDKLGGVSI 126
SW +IR FS G E+ L +M P + + L CAR ++ G +
Sbjct: 255 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
HG L D + + AL+D+YSK G + A+ +F KNVVSWN+++ G+ GD
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 374
Query: 187 DEAQHLFDKI--PGKDV---------------------------------------ISWN 205
+ ++ G+DV + N
Sbjct: 375 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVAN 434
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG------------------- 246
+ ++ Y+K G++ A +F + + + SWN +I G+ S
Sbjct: 435 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLP 494
Query: 247 ------SILSA----------REVFDAMPK----RNSVSLITMIAGYSKSGDVDSAHKLF 286
S+LSA +EV + + R+ +++++ Y G++ + LF
Sbjct: 495 DSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
D M++K L+S+N +I Y QN P AL +F M+ I + +++ V ACS L
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG--ISMMPVFGACSLLPS 612
Query: 347 LEHWRWIESHINDFGVVLDD--HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
L R E+H +L+D +A +L+D+YAK+GSI ++ ++F+GL+++ +++AMI
Sbjct: 613 LRLGR--EAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GL 463
G+GI+G A +AIKLFE+M P+ +T+ G+LTA NH+GL+ EG + MK + GL
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELII-NMPTQPNADVWGALLLACRLHNNVELGEIAV 522
P + HY ++D+LGRAG LD+A ++ M + + +W +LL +CR+H N+E+GE
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+LE + Y LLS++YA LG+W+D +K+R + ++ K GCSW +
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 842
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 126/558 (22%), Positives = 230/558 (41%), Gaps = 89/558 (15%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCARIQ 118
+ L + + F W VI +S+ + E + +++M L P +K+CA +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 119 DKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
D G+++HG V V+T L++ +V N+L+S
Sbjct: 202 DVGIGLAVHGLV----------VKTGLVE---------------------DVFVGNALVS 230
Query: 179 GYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERN------- 231
Y G + +A LFD +P ++++SWNSMI +S G +++ L +M E N
Sbjct: 231 FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290
Query: 232 -LASWNTMIAGYIDSGSILSAREVFD-AMPKRNSVSLI---TMIAGYSKSGDVDSAHKLF 286
+A+ T++ I + V A+ R L+ ++ YSK G + +A +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
+ K+++S+N M+ ++ ++ ML +V D++T+ + + C
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
L + + + V ++ +A A V YAK GS+ A +FHG+R + + +++A+I G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 407 --------------------------FGINGRASDAIKLFEQMLGENI---------GPN 431
F + S KL LG+ + +
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 432 LVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELII 491
L Y +L+ Y H G + F++M+D LV + ++ + G+ D A +
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS----WNTVITGYLQNGFPDRALGVFR 586
Query: 492 NM---PTQPNADVWGALLLACRLHNNVELGEIAVQHCIK--LESDTVGYYSLLSSIYANL 546
M Q + AC L ++ LG A + +K LE D SL+ +YA
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI-DMYAKN 645
Query: 547 GRWDDAKKLRMGVKGKNV 564
G + K+ G+K K+
Sbjct: 646 GSITQSSKVFNGLKEKST 663
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 153/341 (44%), Gaps = 52/341 (15%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
Y + H + + SW +I +Q ++ ++QM+ GL P S + S L +C+
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
+++ G +HG + + ++V ++L LY G++ T + +FD M +K++VSWN+
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 176 LLSGYLKAGDLDEAQHLFDK----------------------IPG--------------- 198
+++GYL+ G D A +F + +P
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 627
Query: 199 --KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFD 256
D S+I Y+K G++ Q++ +F + E++ ASWN MI GY G A ++F+
Sbjct: 628 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 687
Query: 257 AMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD-----EKDLLSYNAMIACYAQN 307
M + + ++ + ++ + SG + + DQM + +L Y +I +
Sbjct: 688 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
+ +AL + + E++ D S++S+C +LE
Sbjct: 748 GQLDKALRV----VAEEMSEEADVGIWKSLLSSCRIHQNLE 784
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 30/338 (8%)
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
+S + + GDLD++ + G D S ++ + G + QA+ +R
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASG------KRKDIEMG 103
Query: 237 TMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS 296
I + + L +V +ITM Y+ G D + +FD + K+L
Sbjct: 104 RKIHQLVSGSTRLRNDDVL-------CTRIITM---YAMCGSPDDSRFVFDALRSKNLFQ 153
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESH 356
+NA+I+ Y++N E LE F M+ ++ PD T VI AC+ + D+ +
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMIST-TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 357 INDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDA 416
+ G+V D + ALV Y G + A +LF + +R+LV++++MI F NG + ++
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 417 IKLFEQMLGEN----IGPNLVTYTGILTAYNHAGLVEEGY----WCFNSMKDNGLVPLVD 468
L +M+ EN P++ T +L + G W D LV
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL--- 329
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
++D+ + G + A ++I M N W ++
Sbjct: 330 -NNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMV 365
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 291/587 (49%), Gaps = 83/587 (14%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D+ W ++ +S G+ +E + L+ +M G P S+ I SAL +C G IH
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIH 307
Query: 128 GQV-HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA--- 183
V + + +YV AL+ +Y++ G + A ++ +M +VV+WNSL+ GY++
Sbjct: 308 ASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 184 -------GDLDEAQHLFDKIPGKDVIS----------------------W-------NSM 207
D+ A H D++ +I+ W N++
Sbjct: 368 KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTL 427
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI 267
I YSK F +M +++L SW T+IAGY + + A E+F + K+ + +
Sbjct: 428 IDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEID 486
Query: 268 TMIAG---------------------------------------YSKSGDVDSAHKLFDQ 288
MI G Y K ++ A ++F+
Sbjct: 487 EMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFES 546
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
+ KD++S+ +MI+ A N EA+ELF M+ E + D + L ++SA + L L
Sbjct: 547 IKGKDVVSWTSMISSSALNGNESEAVELFRRMV--ETGLSADSVALLCILSAAASLSALN 604
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
R I ++ G L+ +A A+VD+YA G + A +F + ++ L+ Y++MI +G
Sbjct: 605 KGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYG 664
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLV 467
++G A++LF++M EN+ P+ +++ +L A +HAGL++EG M+ + L P
Sbjct: 665 MHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWP 724
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
+HY +VD+LGRA + EA+E + M T+P A+VW ALL ACR H+ E+GEIA Q ++
Sbjct: 725 EHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLE 784
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
LE G L+S+++A GRW+D +K+R +K + K PGCSW +
Sbjct: 785 LEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 143/568 (25%), Positives = 249/568 (43%), Gaps = 100/568 (17%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
L K ++ +Q+H+ I E F+ L++ L + + +
Sbjct: 89 LCGKRRAVSQGRQLHSRIF-KTFPSFELDFLAGKLVFMYGKCGSLDD-AEKVFDEMPDRT 146
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHG 128
+F+W +I + G+ A++LY M+ G+ + + LK+CA+++D G +H
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHS 206
Query: 129 QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK-NVVSWNSLLSGYLKAGDLD 187
+ LGY + ++ AL+ +Y+K D+ AR++FD EK + V WNS+LS Y +G
Sbjct: 207 LLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 266
Query: 188 EAQHLFDKI----P----------------------GKDVIS--------------WNSM 207
E LF ++ P GK++ + N++
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM----PKRNS 263
I+ Y++ G M QA + ++M ++ +WN++I GY+ + A E F M K +
Sbjct: 327 IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 386
Query: 264 VSLITMIAG-----------------------------------YSKSGDVDSAHKLFDQ 288
VS+ ++IA YSK + F +
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
M +KDL+S+ +IA YAQN EALELF + K + + D+M L S++ A S L +
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI--DEMILGSILRASSVLKSML 504
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
+ I HI G +LD + LVD+Y K ++ A +F ++ +D+V++++MI
Sbjct: 505 IVKEIHCHILRKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYN-----------HAGLVEEGYWCFNS 457
+NG S+A++LF +M+ + + V IL+A H L+ +G+ S
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGS 623
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDE 485
+ V +VD Y DL D
Sbjct: 624 IA----VAVVDMYACCGDLQSAKAVFDR 647
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 201/469 (42%), Gaps = 85/469 (18%)
Query: 6 LTTLMKKCSTLNHAK---QIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
+ + + C ++AK +IHA +L + H E L++ + L+ + IL
Sbjct: 287 IVSALTACDGFSYAKLGKEIHASVLKSSTHSSE-LYVCNALIAMYTRCGKMPQ-AERILR 344
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
++N D +W +I+ + Q + EA+ + M G +++S + + R+ + L
Sbjct: 345 QMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLA 404
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G+ +H V G+D+ + V L+D+YSK + F M +K+++SW ++++GY +
Sbjct: 405 GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQ 464
Query: 183 AGDLDEAQHLFDKIPGK--------------------------------------DVISW 204
EA LF + K D +
Sbjct: 465 NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQ 524
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR--- 261
N ++ Y K NM A +F+ + +++ SW +MI+ +G+ A E+F M +
Sbjct: 525 NELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLS 584
Query: 262 -NSVSL-----------------------------------ITMIAGYSKSGDVDSAHKL 285
+SV+L + ++ Y+ GD+ SA +
Sbjct: 585 ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAV 644
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
FD+++ K LL Y +MI Y + K A+ELF+ M NV PD ++ +++ ACS G
Sbjct: 645 FDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE--NVSPDHISFLALLYACSHAG 702
Query: 346 DLEHWR-WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
L+ R +++ +++ + LVD+ ++ + +A+E ++
Sbjct: 703 LLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 240/407 (58%), Gaps = 10/407 (2%)
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA 233
N L++ Y+K L++A LFD++P ++VISW +MIS YSK +A L M N+
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 234 SWNTMIAGYIDSGSILS-AREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQ 288
+ + S + +S R + + K S + +I ++K G+ + A +FD+
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
M D + +N++I +AQNS+ ALELF M + ++ TL SV+ AC+ L LE
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA--GFIAEQATLTSVLRACTGLALLE 277
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
+++H++ D L ALVD+Y K GS++ A +F+ +++RD++ +S MI G
Sbjct: 278 --LGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLA 335
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLV 467
NG + +A+KLFE+M PN +T G+L A +HAGL+E+G++ F SMK G+ P+
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
+HYG M+DLLG+AG LD+A +L+ M +P+A W LL ACR+ N+ L E A + I
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIA 455
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
L+ + G Y+LLS+IYAN +WD +++R ++ + + K PGCSW +
Sbjct: 456 LDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIE 502
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 155/372 (41%), Gaps = 76/372 (20%)
Query: 95 MQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGD 154
+Q GL S S +K C + G I ++ G+ +++ L+++Y K
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNL 111
Query: 155 VGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF-----DKI-PG---------- 198
+ A ++FD+M ++NV+SW +++S Y K +A L D + P
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 199 --------------------KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTM 238
DV +++I ++K G + A S+F +M + WN++
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 239 IAGYIDSGSILSAREVFDAMPK--------------RNSVSLITMIAG------------ 272
I G+ + A E+F M + R L + G
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ 291
Query: 273 -----------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYML 321
Y K G ++ A ++F+QM E+D+++++ MI+ AQN +EAL+LF M
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM- 350
Query: 322 KPEINVHPDKMTLASVISACSQLGDLEH-WRWIESHINDFGVVLDDHLATALVDLYAKSG 380
P+ +T+ V+ ACS G LE W + S +G+ ++DL K+G
Sbjct: 351 -KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 381 SIDKAYELFHGL 392
+D A +L + +
Sbjct: 410 KLDDAVKLLNEM 421
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 166/365 (45%), Gaps = 47/365 (12%)
Query: 7 TTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHN 66
+++++ C+ ++ + +H I+ GL +F+ L+ DV + +
Sbjct: 166 SSVLRSCNGMSDVRMLHCGIIKEGLE--SDVFVRSALI-DVFAKLGEPEDALSVFDEMVT 222
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
D+ W +I F+Q + A+ L+ +M+R G ++S L++C + L + +
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGL--ALLELGM 280
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
VH++ YD + + AL+D+Y K G + A +VF++M E++V++W++++SG + G
Sbjct: 281 QAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYS 340
Query: 187 DEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGY 242
EA LF+++ + I+ ++ S AG ++ F+ M
Sbjct: 341 QEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM--------------- 385
Query: 243 IDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD-EKDLLSYNAMI 301
++++ P R MI K+G +D A KL ++M+ E D +++ ++
Sbjct: 386 ---------KKLYGIDPVREHYG--CMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Query: 302 -ACYAQNSKPKEALELFNYMLKPEINVHPD---KMTLASVISACSQLGDLEHWRWIESHI 357
AC Q + + L Y K I + P+ TL S I A SQ D I + +
Sbjct: 435 GACRVQRN-----MVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD--SVEEIRTRM 487
Query: 358 NDFGV 362
D G+
Sbjct: 488 RDRGI 492
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 163/535 (30%), Positives = 277/535 (51%), Gaps = 28/535 (5%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMG-LCPTSHAISSALKSCARIQ 118
+ + + D SW VI ++ ++ +A L+ + G + P S I S L CA++
Sbjct: 285 LFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLT 344
Query: 119 DKLGGVSIHGQVHVLGY---DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
D G IH + Y DT V AL+ Y++ GD A F M+ K+++SWN+
Sbjct: 345 DLASGKEIHSYILRHSYLLEDTSV--GNALISFYARFGDTSAAYWAFSLMSTKDIISWNA 402
Query: 176 LLSGYLKAGD-----------LDEAQHLFDKIPGKDVISWNSMISGYSKAGNM---DQAN 221
+L + + L+EA L D + ++ + + G K +
Sbjct: 403 ILDAFADSPKQFQFLNLLHHLLNEAITL-DSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 222 SLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNS-VSLITMIAGYSKSGDVD 280
L E L N ++ Y G++ A ++F + +R + VS ++++GY SG D
Sbjct: 462 GLLHDEEEPKLG--NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHD 519
Query: 281 SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA 340
A LF +M DL +++ M+ YA++ P EA+ +F + + P+ +T+ +++
Sbjct: 520 DAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQAR--GMRPNTVTIMNLLPV 577
Query: 341 CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAY 400
C+QL L R +I G+ D L L+D+YAK GS+ AY +F +RDLV +
Sbjct: 578 CAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMF 636
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+AM+ G+ ++GR +A+ ++ M NI P+ V T +LTA HAGL+++G ++S++
Sbjct: 637 TAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRT 696
Query: 461 -NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGE 519
+G+ P ++ Y VDL+ R G LD+AY + MP +PNA++WG LL AC +N ++LG
Sbjct: 697 VHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGH 756
Query: 520 IAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
H ++ ESD G + L+S++YA +W+ +LR +K K + K GCSW +
Sbjct: 757 SVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLE 811
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 209/455 (45%), Gaps = 99/455 (21%)
Query: 102 PTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDV-GTARK 160
P+S + L C R+ D G S+H + G + V AL+ +Y+K G + A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 161 VFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF----------------DKIP------- 197
FD +A+K+VVSWN++++G+ + + +A F + +P
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 198 ------GKDVISW--------------NSMISGYSKAGNMDQANSLFQKMPERNLASWNT 237
G+ + S+ NS++S Y + G +++A SLF +M ++L SWN
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNV 299
Query: 238 MIAGYIDSGSILSAREVF-------DAMPKRNSVSLIT---------------------- 268
+IAGY + A ++F D P +SV++I+
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSP--DSVTIISILPVCAQLTDLASGKEIHSYIL 357
Query: 269 --------------MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEAL 314
+I+ Y++ GD +A+ F M KD++S+NA++ +A + K + L
Sbjct: 358 RHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFL 417
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH---LATA 371
L +++L I + D +T+ S++ C + + + + + G++ D+ L A
Sbjct: 418 NLLHHLLNEAITL--DSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNA 475
Query: 372 LVDLYAKSGSIDKAYELFHGL-RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGP 430
L+D YAK G+++ A+++F GL +R LV+Y++++ G+ +G DA LF +M
Sbjct: 476 LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM----STT 531
Query: 431 NLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
+L T++ ++ Y + E F ++ G+ P
Sbjct: 532 DLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRP 566
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 132/532 (24%), Positives = 227/532 (42%), Gaps = 122/532 (22%)
Query: 111 LKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV 170
+K+CA + D G ++HG V LG+ C V ++L++Y+K + +K+F +M +
Sbjct: 28 VKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDP 87
Query: 171 VSWNSLLSG-----------YLKAGDL-DEAQ--------------HLFDKIPG------ 198
V WN +L+G + KA DE + L D G
Sbjct: 88 VVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSY 147
Query: 199 -------KDVISWNSMISGYSKAGNM-DQANSLFQKMPERNLASWNTMIAGYIDSGSILS 250
KD + N+++S Y+K G + A + F + ++++ SWN +IAG+ ++ +
Sbjct: 148 IIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMAD 207
Query: 251 AREVFDAM---PKRNSVSLI---------------------------------------- 267
A F M P + + I
Sbjct: 208 AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCN 267
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV 327
++++ Y + G ++ A LF +M KDL+S+N +IA YA N + +A +LF+ ++ +V
Sbjct: 268 SLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG-DV 326
Query: 328 HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAY 386
PD +T+ S++ C+QL DL + I S+I +L+D + AL+ YA+ G AY
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 387 ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
F + +D+++++A++ F + + + L +L E I + VT +L
Sbjct: 387 WAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLK------ 440
Query: 447 LVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+C N ++ G V V Y + +AG L + E P NA
Sbjct: 441 ------FCIN-VQGIGKVKEVHGYSV------KAGLLHDEEE-----PKLGNA------- 475
Query: 507 LACRLHNNVELGEIAVQHCIKL---ESDTVGYYSLLSSIYANLGRWDDAKKL 555
L + G + H I L E T+ Y+ L S Y N G DDA+ L
Sbjct: 476 ---LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQML 524
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/581 (30%), Positives = 302/581 (51%), Gaps = 64/581 (11%)
Query: 3 ATKLTTLMKKCSTLNHAKQIHAHILINGLHH---LEPLFIHHILLWDVNNYKPLSHYVHP 59
A L T++ + TLNH +Q+HA ++I+G L + + + ++ S P
Sbjct: 7 ARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP 66
Query: 60 I-LHNLHNPDSFSWGCVIRFFSQKGQ--FIEAVSLYVQMQRMGLCPTSHAISSALKSCAR 116
N H SW ++ +S+ + + + LY +M+R S + A+K+C
Sbjct: 67 CWKRNRH-----SWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVG 121
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
+ G+ IHG G D YV +L+++Y+++G
Sbjct: 122 LGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGT---------------------- 159
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA-SW 235
++ AQ +FD+IP ++ + W ++ GY K + LF M + LA
Sbjct: 160 ---------MESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDA 210
Query: 236 NTMIA-----GYIDSGSI------LSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHK 284
T+I G + +G + +S R F S+I M Y K +D+A K
Sbjct: 211 LTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM---YVKCRLLDNARK 267
Query: 285 LFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
LF+ +++++ + +I+ +A+ + EA +LF ML+ I P++ TLA+++ +CS L
Sbjct: 268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESI--LPNQCTLAAILVSCSSL 325
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
G L H + + ++ G+ +D T+ +D+YA+ G+I A +F + +R+++++S+MI
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGL 463
FGING +A+ F +M +N+ PN VT+ +L+A +H+G V+EG+ F SM +D G+
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVEL-GEIAV 522
VP +HY MVDLLGRAG + EA I NMP +P A WGALL ACR+H V+L GEIA
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIA- 504
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWD--DAKKLRMGVKG 561
+ + +E + Y LLS+IYA+ G W+ + + +MG+KG
Sbjct: 505 EKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKG 545
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/661 (26%), Positives = 322/661 (48%), Gaps = 89/661 (13%)
Query: 1 MVATKLTTLMKKC---STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYV 57
M + ++L+K C K +HA ++ + L+ I L+ + + V
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
+ D SW ++ + G+ ++A+ ++V+ +GL P + ++ +++C+
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 118 Q-DKLGGVSIHGQVHVLGYDTCVYVQTALLDL--------------YSKMGDVG------ 156
+G V++ + +++ V V +L+D+ + KM ++
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 157 -------------------------------TARKVFDEMAE-------KNVVSWN---- 174
T VF AE K + SW
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 175 -------SLLSGYLKA---GDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNM-DQANSL 223
SL+ Y K G +D+ + +FD++ V+SW ++I+GY K N+ +A +L
Sbjct: 300 LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINL 359
Query: 224 FQKMPERNLASWN--TMIAGYIDSGSILSAR---EVFDAMPKR----NSVSLITMIAGYS 274
F +M + N T + + G++ R +V KR NS ++I+ +
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFV 419
Query: 275 KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
KS ++ A + F+ + EK+L+SYN + +N ++A +L + + + E+ V T
Sbjct: 420 KSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA--FTF 477
Query: 335 ASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK 394
AS++S + +G + I S + G+ + + AL+ +Y+K GSID A +F+ +
Sbjct: 478 ASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
R+++++++MI GF +G A ++ F QM+ E + PN VTY IL+A +H GLV EG+
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 455 FNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHN 513
FNSM +D+ + P ++HY MVDLL RAG L +A+E I MP Q + VW L ACR+H+
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657
Query: 514 NVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
N ELG++A + ++L+ + Y LS+IYA G+W+++ ++R +K +N++K GCSW
Sbjct: 658 NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Query: 574 Q 574
+
Sbjct: 718 E 718
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 208/510 (40%), Gaps = 88/510 (17%)
Query: 83 GQFIEAVSLYVQMQRMGLCPT-SHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYV 141
G AVS M R G+ P S SS LKSC R +D G +H ++ + +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 142 QTALLDLYSKMGDVGTARKVFDEM---AEKNVVSWNSLLSGYLKAGDLDEAQHLFDK--- 195
+L+ LYSK GD A VF+ M +++VVSW+++++ Y G +A +F +
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 196 ---IPG----------------------------------KDVISWNSMISGYSKAGN-M 217
+P DV S+I + K N
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 218 DQANSLFQKMPERNLASWNTMIAGYIDSG-----------SILSARE--------VFDAM 258
+ A +F KM E N+ +W MI + G +LS E VF A
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 259 PKRNSV---------------------SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
+ ++ SL+ M A S G VD K+FD+M++ ++S+
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 298 NAMIACYAQNSK-PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESH 356
A+I Y +N EA+ LF+ M+ + +V P+ T +S AC L D + +
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMI-TQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQ 398
Query: 357 INDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDA 416
G+ + +A +++ ++ KS ++ A F L +++LV+Y+ + G N A
Sbjct: 399 AFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQA 458
Query: 417 IKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDL 476
KL ++ +G + T+ +L+ + G + +G + + GL ++ +
Sbjct: 459 FKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISM 518
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALL 506
+ G +D A + N N W +++
Sbjct: 519 YSKCGSIDTASR-VFNFMENRNVISWTSMI 547
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/466 (30%), Positives = 266/466 (57%), Gaps = 12/466 (2%)
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
R++ + I+ + + G ++ T ++D K+ D+ A ++F++++ NV +NS
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGK-----DVISWNSMISGYSKAGNM---DQANSLFQKM 227
++ Y + ++ ++ K D ++ M + G+ Q + K
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 228 -PERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLF 286
P ++ + N +I Y+ ++ A +VFD M +R+ +S ++++GY++ G + A LF
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
M +K ++S+ AMI+ Y EA++ F M + PD+++L SV+ +C+QLG
Sbjct: 199 HLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA--GIEPDEISLISVLPSCAQLGS 256
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
LE +WI + G + + AL+++Y+K G I +A +LF + +D++++S MI G
Sbjct: 257 LELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISG 316
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVP 465
+ +G A AI+ F +M + PN +T+ G+L+A +H G+ +EG F+ M+ D + P
Sbjct: 317 YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEP 376
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHC 525
++HYG ++D+L RAG L+ A E+ MP +P++ +WG+LL +CR N+++ +A+ H
Sbjct: 377 KIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHL 436
Query: 526 IKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
++LE + +G Y LL++IYA+LG+W+D +LR ++ +N+ KTPG S
Sbjct: 437 VELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGS 482
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 198/397 (49%), Gaps = 15/397 (3%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPIL 61
V +++ + N K+I+A I+I+GL + + D + Y +
Sbjct: 9 VENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMV---DFCDKIEDMDYATRLF 65
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGL-CPTSHAISSALKSCARIQDK 120
+ + NP+ F + +IR ++ + + + +Y Q+ R P KSCA +
Sbjct: 66 NQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC 125
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G +HG + G V + AL+D+Y K D+ A KVFDEM E++V+SWNSLLSGY
Sbjct: 126 YLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGY 185
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLASWN 236
+ G + +A+ LF + K ++SW +MISGY+ G +A F++M E + S
Sbjct: 186 ARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLI 245
Query: 237 TMIAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDEK 292
+++ GS+ + + +R + +I YSK G + A +LF QM+ K
Sbjct: 246 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD-LEHWR 351
D++S++ MI+ YA + A+E FN M + + V P+ +T ++SACS +G E R
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAK--VKPNGITFLGLLSACSHVGMWQEGLR 363
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
+ + D+ + L+D+ A++G +++A E+
Sbjct: 364 YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEI 400
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 237/429 (55%), Gaps = 13/429 (3%)
Query: 159 RKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMD 218
R + D ++++ L+ Y G +D A+ +FDK + + WN++ + AG+ +
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 219 QANSLFQKMPERNLAS--------WNTMIAGYIDSGSILSAREVFDAMPKRNSVS----L 266
+ L+ KM + S +A ++ +E+ + +R S +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 267 ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
T++ Y++ G VD A +F M ++++S++AMIACYA+N K EAL F M++ +
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
P+ +T+ SV+ AC+ L LE + I +I G+ + +ALV +Y + G ++
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 387 ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
+F + RD+V+++++I +G++G AI++FE+ML P VT+ +L A +H G
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 447 LVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGAL 505
LVEEG F +M +D+G+ P ++HY MVDLLGRA LDEA +++ +M T+P VWG+L
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Query: 506 LLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI 565
L +CR+H NVEL E A + LE G Y LL+ IYA WD+ K+++ ++ + +
Sbjct: 461 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 520
Query: 566 KTPGCSWTQ 574
K PG W +
Sbjct: 521 KLPGRCWME 529
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 172/387 (44%), Gaps = 35/387 (9%)
Query: 14 STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSH--YVHPILHNLHNPDSFS 71
S+L+ A ++H HIL NG +P + + Y L Y + +
Sbjct: 91 SSLSDALRVHRHILDNGSDQ-DPFLATKL----IGMYSDLGSVDYARKVFDKTRKRTIYV 145
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSC----ARIQDKLGGVSIH 127
W + R + G E + LY +M R+G+ + LK+C + + G IH
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
+ GY + VY+ T L+D+Y++ G V A VF M +NVVSW+++++ Y K G
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGS 247
EA F ++ M + N S+ Q +I GYI
Sbjct: 266 EALRTFREM----------MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRG 315
Query: 248 ILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQN 307
+ S V A L+TM Y + G ++ ++FD+M ++D++S+N++I+ Y +
Sbjct: 316 LDSILPVISA--------LVTM---YGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW-RWIESHINDFGVVLDD 366
K+A+++F ML P +T SV+ ACS G +E R E+ D G+
Sbjct: 365 GYGKKAIQIFEEMLAN--GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLR 393
+VDL ++ +D+A ++ +R
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMR 449
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 16/234 (6%)
Query: 7 TTLMKKC----STLNH---AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHP 59
T ++K C T+NH K+IHAH+ G + ++I L+ D+ Y
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRG--YSSHVYIMTTLV-DMYARFGCVDYASY 238
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQR--MGLCPTSHAISSALKSCARI 117
+ + + SW +I +++ G+ EA+ + +M R P S + S L++CA +
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G IHG + G D+ + V +AL+ +Y + G + ++VFD M +++VVSWNSL+
Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLI 358
Query: 178 SGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKM 227
S Y G +A +F+++ +++ S++ S G +++ LF+ M
Sbjct: 359 SSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 18/226 (7%)
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+S N +I + K K+A+ + + P + T +I C L +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ------ESSPSQQTYELLILCCGHRSSLSDALRVH 100
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRAS 414
HI D G D LAT L+ +Y+ GS+D A ++F RKR + ++A+ + G
Sbjct: 101 RHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTA-------YNHAGLVEEGYWCFNSMKDNGLVPLV 467
+ + L+ +M + + TYT +L A NH + +G + G V
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH---LMKGKEIHAHLTRRGYSSHV 217
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHN 513
+VD+ R G +D A + MP + N W A ++AC N
Sbjct: 218 YIMTTLVDMYARFGCVDYASYVFGGMPVR-NVVSWSA-MIACYAKN 261
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 217/369 (58%), Gaps = 2/369 (0%)
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP 259
DV N++++ Y ++G + A + +MP R+ SWN++++ Y++ G + AR +FD M
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 260 KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNY 319
+RN S MI+GY+ +G V A ++FD M +D++S+NAM+ YA E LE+FN
Sbjct: 234 ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNK 293
Query: 320 MLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
ML PD TL SV+SAC+ LG L W+ +I+ G+ ++ LATALVD+Y+K
Sbjct: 294 MLDDSTE-KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC 352
Query: 380 GSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
G IDKA E+F KRD+ ++++I ++G DA+++F +M+ E PN +T+ G+L
Sbjct: 353 GKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVL 412
Query: 440 TAYNHAGLVEEGYWCFNSMKDNGLV-PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN 498
+A NH G++++ F M V P ++HYG MVDLLGR G ++EA EL+ +P
Sbjct: 413 SACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEA 472
Query: 499 ADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMG 558
+ + +LL AC+ +E E ++L Y+ +S++YA+ GRW+ R
Sbjct: 473 SILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRN 532
Query: 559 VKGKNVIKT 567
++ + V ++
Sbjct: 533 MRAERVNRS 541
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 213/434 (49%), Gaps = 63/434 (14%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLS-HYVHPILHNL 64
+ + ++ +L +Q HA +L GL H + ++ + N +P + Y H IL+ +
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFH-DTFSASKLVAFAATNPEPKTVSYAHSILNRI 100
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+P+ F+ VIR ++ A++++ +M + P ++ + LK+CA G
Sbjct: 101 GSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGR 160
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
IHG G T V+V+ L+++Y + G ARKV D M ++ VSWNSLLS YL+ G
Sbjct: 161 QIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKG 220
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYID 244
+DEA+ LFD++ ++V SWN MISGY+ AG + +A +F MP R++ SWN M+ Y
Sbjct: 221 LVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAH 280
Query: 245 SGSILSAREVF-----DAMPKRNSVSLITMIAG--------------------------- 272
G EVF D+ K + +L+++++
Sbjct: 281 VGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 340
Query: 273 --------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
YSK G +D A ++F ++D+ ++N++I+ + + K+ALE+F+ M+
Sbjct: 341 LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE- 399
Query: 325 INVHPDKMTLASVISACSQLGDLEHWR----------WIESHINDFGVVLDDHLATALVD 374
P+ +T V+SAC+ +G L+ R +E I +G +VD
Sbjct: 400 -GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYG---------CMVD 449
Query: 375 LYAKSGSIDKAYEL 388
L + G I++A EL
Sbjct: 450 LLGRMGKIEEAEEL 463
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 144/308 (46%), Gaps = 23/308 (7%)
Query: 266 LITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEI 325
L+ A + V AH + +++ + ++N++I YA +S P+ AL +F ML
Sbjct: 77 LVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGP- 135
Query: 326 NVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
V PDK + V+ AC+ E R I G+V D + LV++Y +SG + A
Sbjct: 136 -VFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIA 194
Query: 386 YELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHA 445
++ + RD V++++++ + G +A LF++M N+ ++ +++ Y A
Sbjct: 195 RKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAA 250
Query: 446 GLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM----PTQPNADV 501
GLV+E F+SM +V + MV G +E E+ M +P+
Sbjct: 251 GLVKEAKEVFDSMPVRDVV----SWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFT 306
Query: 502 WGALLLACRLHNNVELGE-IAV---QHCIKLESDTVGYYSL-LSSIYANLGRWDDAKKLR 556
++L AC ++ GE + V +H I++E G+ + L +Y+ G+ D A ++
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIE----GFLATALVDMYSKCGKIDKALEVF 362
Query: 557 MGVKGKNV 564
++V
Sbjct: 363 RATSKRDV 370
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 128/277 (46%), Gaps = 14/277 (5%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
D SW ++ ++ G + E + ++ +M P + S L +CA + G +
Sbjct: 267 DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV 326
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
H + G + ++ TAL+D+YSK G + A +VF ++++V +WNS++S G
Sbjct: 327 HVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLG 386
Query: 187 DEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMP-----ERNLASWNT 237
+A +F ++ + I++ ++S + G +DQA LF+ M E + +
Sbjct: 387 KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC 446
Query: 238 MIAGYIDSGSILSAREVFDAMPK-RNSVSLITMIAGYSKSGDVDSAHKLFDQMDE---KD 293
M+ G I A E+ + +P S+ L +++ + G ++ A ++ +++ E +D
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRD 506
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPD 330
Y M YA + + ++ ++ M +N D
Sbjct: 507 SSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRSLD 543
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/555 (30%), Positives = 279/555 (50%), Gaps = 51/555 (9%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D+ +W ++ +S+ G EA++L+ Q++ P ++ ++ L +CA + + G I
Sbjct: 34 DTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQ 93
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA--EKNVVSWNSLLSGYLKAGD 185
V G+ + V +L+D+Y K D +A KVF +M +N V+W SLL Y+ A
Sbjct: 94 SLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQ 153
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS-----WNTMIA 240
+ A +F ++P + +WN MISG++ G ++ SLF++M E + M A
Sbjct: 154 FEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNA 213
Query: 241 GYIDSGSILSAREVF-----------------------------DAMPKRNSVSLITMIA 271
DS +++ R V DAM + S+ ++T ++
Sbjct: 214 CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS 273
Query: 272 GYS------KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEI 325
S K G+ + A ++F EK+++++ MI Y +N ++AL F M+K
Sbjct: 274 WNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKS-- 331
Query: 326 NVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
V D +V+ ACS L L H + I + G ++ ALV+LYAK G I +A
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 386 YELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHA 445
F + +DLV+++ M++ FG++G A A+KL++ M+ I P+ VT+ G+LT +H+
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 446 GLVEEGYWCFNSMKDNGLVPL-VDHYGIMVDLLGRAGWLDEAYELIINMPT----QPNAD 500
GLVEEG F SM + +PL VDH M+D+ GR G L EA +L + N
Sbjct: 452 GLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNS 511
Query: 501 VWGALLLACRLHNNVELGEIAVQHCIKL-ESDTVGYYSLLSSIYANLGRWDDAKKLRMGV 559
W LL AC H + ELG V +K+ E + LLS++Y + GRW + + +R +
Sbjct: 512 SWETLLGACSTHWHTELGR-EVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREM 570
Query: 560 KGKNVIKTPGCSWTQ 574
+ + KTPGCSW +
Sbjct: 571 VERGMKKTPGCSWIE 585
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 184/408 (45%), Gaps = 51/408 (12%)
Query: 150 SKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV----ISWN 205
+K G + +AR+VFD M E + V+WN++L+ Y + G EA LF ++ D S+
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 206 SMISGYSKAGNMDQANSLFQKMPER-----NLASWNTMIAGYIDSGSILSAREVFDAM-- 258
+++S + GN+ + Q + R +L N++I Y LSA +VF M
Sbjct: 75 AILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFN 318
RN V+ +++ Y + ++A +F +M ++ ++N MI+ +A K + L LF
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 319 YMLKPEINVHPDKMTLASVISACSQ------LGDLEHWRWIE----SHINDFGVVL---- 364
ML+ E PD T +S+++ACS G + H ++ S + VL
Sbjct: 194 EMLESEFK--PDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYT 251
Query: 365 -----DDHLA-------------TALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
DD + +++D K G +KA E+FH ++++V ++ MI G
Sbjct: 252 KLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITG 311
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPL 466
+G NG A++ F +M+ + + Y +L A + L+ G + G
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 371
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADV--WGALLLACRLH 512
+V+L + G + EA ++ N D+ W +L A +H
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDI---ANKDLVSWNTMLFAFGVH 416
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 4/172 (2%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ H + +W +I + + G +A+ +V+M + G+ A + L +C+ +
Sbjct: 293 VFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL 352
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G IHG + G+ YV AL++LY+K GD+ A + F ++A K++VSWN++L
Sbjct: 353 LGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFA 412
Query: 180 YLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKM 227
+ G D+A L+D + D +++ +++ S +G +++ +F+ M
Sbjct: 413 FGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG 429
T+ + AKSG I A ++F G+ + D VA++ M+ + G +AI LF Q+ +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 430 PNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYEL 489
P+ ++T IL+ G V+ G + + +G + ++D+ G+ A ++
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 490 IINMPTQPNADV-WGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGR 548
+M +V W +LL A + N E E A+ +++ ++++ S +A+ G+
Sbjct: 128 FRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGK 184
Query: 549 WDDAKKL 555
+ L
Sbjct: 185 LESCLSL 191
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 258 bits (659), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 171/591 (28%), Positives = 292/591 (49%), Gaps = 85/591 (14%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
I NL +PD SW ++ F A++ V+M+ G+ + S+AL C +
Sbjct: 133 IFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
L G+ + V G ++ + V + + +YS+ G AR+VFDEM+ K+++SWNSLLSG
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSG 249
Query: 180 YLKAGDLD-EAQHLF----------DKIPGKDVISW------------------------ 204
+ G EA +F D + VI+
Sbjct: 250 LSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYES 309
Query: 205 -----NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP 259
N ++S YSK G ++ S+F +M ERN+ SW TMI+ D + FD +
Sbjct: 310 LLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVY 369
Query: 260 KRNSVSLITMIAG-----------------------------------YSKSGDVDSAHK 284
N V+ + +I Y+K ++ A K
Sbjct: 370 P-NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKK 428
Query: 285 LFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
F+ + ++++S+NAMI+ +AQN EAL++F L P++ T SV++A +
Sbjct: 429 AFEDITFREIISWNAMISGFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFA 485
Query: 345 GDL--EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
D+ + + +H+ G+ +++AL+D+YAK G+ID++ ++F+ + +++ +++
Sbjct: 486 EDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTS 545
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-N 461
+I + +G + LF +M+ EN+ P+LVT+ +LTA N G+V++GY FN M +
Sbjct: 546 IISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVY 605
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIA 521
L P +HY MVD+LGRAG L EA EL+ +P P + ++L +CRLH NV++G
Sbjct: 606 NLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKV 665
Query: 522 VQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+ ++++ + G Y + +IYA WD A ++R ++ KNV K G SW
Sbjct: 666 AELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSW 716
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/514 (24%), Positives = 228/514 (44%), Gaps = 95/514 (18%)
Query: 110 ALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKN 169
ALK+C D G IHG G+ + V V A++ +Y K G A +F+ + + +
Sbjct: 84 ALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 170 VVSWNSLLSGYLK-------AGDLDEAQHLFDKIP------------------------- 197
VVSWN++LSG+ + A +FD
Sbjct: 142 VVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 198 ----GKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG------- 246
D++ NS I+ YS++G+ A +F +M +++ SWN++++G G
Sbjct: 202 KTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAV 261
Query: 247 -------------------SILS----------AREVFDAMPKRNSVSLIT----MIAGY 273
S+++ AR++ KR SL+ +++ Y
Sbjct: 262 VIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
SK G +++ +F QM E++++S+ MI+ S +A+ +F M V+P+++T
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFD--GVYPNEVT 374
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+I+A ++ I G V + + + + LYAK +++ A + F +
Sbjct: 375 FVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDIT 434
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG--LVEEG 451
R++++++AMI GF NG + +A+K+F E + PN T+ +L A A V++G
Sbjct: 435 FREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQG 493
Query: 452 YWCFNSMKDNGL--VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
C + GL P+V ++D+ + G +DE+ E + N +Q N VW +++ A
Sbjct: 494 QRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDES-EKVFNEMSQKNQFVWTSIISAY 550
Query: 510 RLHNNVELGEIAVQHCIK--LESDTVGYYSLLSS 541
H + E IK + D V + S+L++
Sbjct: 551 SSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA 584
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/552 (29%), Positives = 281/552 (50%), Gaps = 47/552 (8%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI-QDKLGGVSI 126
D+ + +I FS A++L+ +M+ G P + +S L A + D+ V
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGD----VGTARKVFDEMAEKNVVSWNSLLSGYLK 182
H G V AL+ +YSK + +ARKVFDE+ EK+ SW ++++GY+K
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 183 AGDLDEAQHLFDKIPGK-DVISWNSMISGYSKAGNMDQANSLFQKMPE------------ 229
G D + L + + ++++N+MISGY G +A + ++M
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 230 --RNLASW------------------------NTMIAGYIDSGSILSAREVFDAMPKRNS 263
R A+ N++++ Y G AR +F+ MP ++
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDL 351
Query: 264 VSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKP 323
VS +++GY SG + A +F +M EK++LS+ MI+ A+N +E L+LF+ M +
Sbjct: 352 VSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE 411
Query: 324 EINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSID 383
P + I +C+ LG + + + + G AL+ +YAK G ++
Sbjct: 412 --GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 384 KAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYN 443
+A ++F + D V+++A+I G +G ++A+ ++E+ML + I P+ +T +LTA +
Sbjct: 470 EARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Query: 444 HAGLVEEGYWCFNSMKDNGLVPL-VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVW 502
HAGLV++G F+SM+ +P DHY ++DLL R+G +A +I ++P +P A++W
Sbjct: 530 HAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIW 589
Query: 503 GALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGK 562
ALL CR+H N+ELG IA L + G Y LLS+++A G+W++ ++R ++ +
Sbjct: 590 EALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDR 649
Query: 563 NVIKTPGCSWTQ 574
V K CSW +
Sbjct: 650 GVKKEVACSWIE 661
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 195/391 (49%), Gaps = 60/391 (15%)
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
++HG + G+ ++ L+D+Y K ++ AR++FDE++E + ++ +++SGY +G
Sbjct: 35 AVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASG 94
Query: 185 DLDEAQHLFDKIP--GKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI--- 239
D+ A+ +F+K P +D + +N+MI+G+S + A +LF KM N
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 240 -------------------------AGYIDSGS----------------ILSAREVFDAM 258
AGYI S S + SAR+VFD +
Sbjct: 155 LAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI 214
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK-DLLSYNAMIACYAQNSKPKEALELF 317
+++ S TM+ GY K+G D +L + MD+ L++YNAMI+ Y +EALE+
Sbjct: 215 LEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMV 274
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI---NDFGVVLDDHLATALVD 374
M+ I + D+ T SVI AC+ G L+ + + +++ DF H +LV
Sbjct: 275 RRMVSSGIEL--DEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF----HFDNSLVS 328
Query: 375 LYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVT 434
LY K G D+A +F + +DLV+++A++ G+ +G +A +F++M +NI ++
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIM 388
Query: 435 YTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
+G+ A N G EEG F+ MK G P
Sbjct: 389 ISGL--AEN--GFGEEGLKLFSCMKREGFEP 415
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 135/302 (44%), Gaps = 21/302 (6%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L +L KC + A+ I + L L ++ + K I +
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL-------IFKEMK 378
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+ SW +I ++ G E + L+ M+R G P +A S A+KSCA + G
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
H Q+ +G+D+ + AL+ +Y+K G V AR+VF M + VSWN+L++ + G
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 186 LDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE-RNLASWNTMIA 240
EA +++++ K D I+ ++++ S AG +DQ F M + A
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 241 GYID----SGSILSAREVFDAMPKRNSVSL-ITMIAGYSKSGDVD----SAHKLFDQMDE 291
ID SG A V +++P + + + +++G G+++ +A KLF + E
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 292 KD 293
D
Sbjct: 619 HD 620
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 221/392 (56%), Gaps = 11/392 (2%)
Query: 189 AQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSI 248
A+HLF+ + D++ +NSM GYS+ N + SLF ++ E + N + + ++
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 249 LSAREVFDAMP--------KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAM 300
A E + N T+I Y++ DVDSA +FD++ E ++ YNAM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
I YA+ ++P EAL LF M + P+++TL SV+S+C+ LG L+ +WI +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLK--PNEITLLSVLSSCALLGSLDLGKWIHKYAKKH 259
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
+ TAL+D++AK GS+D A +F +R +D A+SAMI + +G+A ++ +F
Sbjct: 260 SFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMF 319
Query: 421 EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGR 479
E+M EN+ P+ +T+ G+L A +H G VEEG F+ M G+VP + HYG MVDLL R
Sbjct: 320 ERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSR 379
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
AG L++AYE I +P P +W LL AC HNN++L E + +L+ G Y +L
Sbjct: 380 AGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVIL 439
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
S++YA +W+ LR +K + +K PGCS
Sbjct: 440 SNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 197/439 (44%), Gaps = 69/439 (15%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPL-FIHHILLWDVNNYKPLS-HYVHPILHNLHN 66
L+ KC++L QI A+ + + H+E + F+ ++ + + S Y + +
Sbjct: 35 LISKCNSLRELMQIQAYAIKS---HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD + + R +S+ +E SL+V++ G+ P ++ S LK+CA + G +
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
H LG D VYV L+++Y++ DV +AR VFD + E VV +N++++GY +
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 187 DEAQHLFDKIPGK----------------------DVISW-----------------NSM 207
+EA LF ++ GK D+ W ++
Sbjct: 212 NEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN----S 263
I ++K G++D A S+F+KM ++ +W+ MI Y + G + +F+ M N
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDE 331
Query: 264 VSLITMIAGYSKSGDVDSAHKLFDQMDEK-----DLLSYNAMIACYAQNSKPKEALELFN 318
++ + ++ S +G V+ K F QM K + Y +M+ ++ ++A E +
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFID 391
Query: 319 YMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA---TALVDL 375
++ + P M +++ACS +L+ + I + LDD L +L
Sbjct: 392 -----KLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFE----LDDSHGGDYVILSNL 442
Query: 376 YAKSGSIDKAYELFHGLRK 394
YA+ +K +E LRK
Sbjct: 443 YAR----NKKWEYVDSLRK 457
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/584 (29%), Positives = 286/584 (48%), Gaps = 83/584 (14%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
W +I F G ++ LY+ + + S + + AL +C++ ++ G IH V
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 132 VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA-------- 183
+G YV T+LL +YSK G VG A VF + +K + WN++++ Y +
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359
Query: 184 --GDLDEAQHLFDKIPGKDVISWNS-----------------------------MISGYS 212
G + + L D +VIS S +++ YS
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 213 KAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM--------PKRNSV 264
K G A +F+ M E+++ +W ++I+G +G A +VF M P + +
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 265 SLIT---------------------------------MIAGYSKSGDVDSAHKLFDQMDE 291
+ +T +I YSK G + A K+F M
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST 539
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
++++++N+MI+CY++N+ P+ +++LFN ML + PD +++ SV+ A S L +
Sbjct: 540 ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQ--GIFPDSVSITSVLVAISSTASLLKGK 597
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
+ + G+ D HL AL+D+Y K G A +F ++ + L+ ++ MIYG+G +G
Sbjct: 598 SLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG 657
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHY 470
A+ LF++M P+ VT+ +++A NH+G VEEG F MK D G+ P ++HY
Sbjct: 658 DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHY 717
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES 530
MVDLLGRAG L+EAY I MP + ++ +W LL A R H+NVELG ++ + +++E
Sbjct: 718 ANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEP 777
Query: 531 DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+ Y L ++Y G ++A KL +K K + K PGCSW +
Sbjct: 778 ERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIE 821
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 141/544 (25%), Positives = 245/544 (45%), Gaps = 103/544 (18%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCP---TSHAISSALKSCARIQDKLG 122
+P S + G IR QKG++++A+ LY + G P + S LK+C+ + +
Sbjct: 23 SPASINSG--IRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSY 78
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFD-------EMAEKNVVSWNS 175
G +IHG V VLG+ ++ T+L+++Y K G + A +VFD ++ ++V WNS
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 176 LLSGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQA----------- 220
++ GY K E F ++ D S + ++S K GN +
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 221 NSL--------------------------FQKMPER-NLASWNTMIAGYIDSGSILSARE 253
NSL F ++ ++ N+ WN MI G+ SG S+ +
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 254 VFDAMPKRNSVSLI----------------------------------------TMIAGY 273
++ + K NSV L+ ++++ Y
Sbjct: 259 LY-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMY 317
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
SK G V A +F + +K L +NAM+A YA+N AL+LF +M + +V PD T
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQK--SVLPDSFT 375
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
L++VIS CS LG + + + + + + + +AL+ LY+K G AY +F +
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN--IGPNLVTYTGILTAYNHAGLVEEG 451
++D+VA+ ++I G NG+ +A+K+F M ++ + P+ T + A + G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 452 YWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRL 511
SM GLV V ++DL + G + A ++ +M T+ N W + +++C
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNS-MISCYS 553
Query: 512 HNNV 515
NN+
Sbjct: 554 RNNL 557
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 155/342 (45%), Gaps = 18/342 (5%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPIL 61
+ T +T L Q+H ++ GL + +F+ L+ D+ + L +
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTGL--VLNVFVGSSLI-DLYSKCGLPEMALKVF 534
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
++ + +W +I +S+ ++ L+ M G+ P S +I+S L + + L
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLL 594
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G S+HG LG + +++ AL+D+Y K G A +F +M K++++WN ++ GY
Sbjct: 595 KGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 182 KAGDLDEAQHLFDKIP----GKDVISWNSMISGYSKAGNMDQANSLFQKMP-----ERNL 232
GD A LFD++ D +++ S+IS + +G +++ ++F+ M E N+
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG-----DVDSAHKLFD 287
+ M+ +G + A AMP S+ + S++ + SA KL
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLL- 773
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
+M+ + +Y +I Y + EA +L M + ++ P
Sbjct: 774 RMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQP 815
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 272/520 (52%), Gaps = 50/520 (9%)
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHG 128
S W +R + + F E++SLY M R G P + + LKSCA + + G +H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 129 QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDE 188
V G +T +V TAL+ +Y K G V +
Sbjct: 78 HVTKGGCETEPFVLTALISMYCKCGLVA-------------------------------D 106
Query: 189 AQHLFDKIPGKDVIS--WNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG----- 241
A+ +F++ P +S +N++ISGY+ + A +F++M E ++ + + G
Sbjct: 107 ARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC 166
Query: 242 ----YIDSGSILSAREVFDAMPKRNSV--SLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
Y+ G L + V + +V S ITM Y K G V++ +LFD+M K L+
Sbjct: 167 TVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM---YMKCGSVEAGRRLFDEMPVKGLI 223
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
++NA+I+ Y+QN + LEL+ M V PD TL SV+S+C+ LG + +
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSS--GVCPDPFTLVSVLSSCAHLGAKKIGHEVGK 281
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
+ G V + ++ A + +YA+ G++ KA +F + + LV+++AMI +G++G
Sbjct: 282 LVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEI 341
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHYGIMV 474
+ LF+ M+ I P+ + +L+A +H+GL ++G F +MK + L P +HY +V
Sbjct: 342 GLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLV 401
Query: 475 DLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVG 534
DLLGRAG LDEA E I +MP +P+ VWGALL AC++H NV++ E+A I+ E + +G
Sbjct: 402 DLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIG 461
Query: 535 YYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
YY L+S+IY++ + ++R+ ++ + K PG S+ +
Sbjct: 462 YYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 215/345 (62%), Gaps = 6/345 (1%)
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
+++ Y G + SA+ VFD ++ + +++ Y+K+G +D A KLFD+M E++++
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEIN---VHPDKMTLASVISACSQLGDLEHWRW 352
S++ +I Y K KEAL+LF M P+ N V P++ T+++V+SAC +LG LE +W
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 353 IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL-RKRDLVAYSAMIYGFGING 411
+ ++I+ + V +D L TAL+D+YAK GS+++A +F+ L K+D+ AYSAMI + G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 412 RASDAIKLFEQML-GENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDH 469
+ +LF +M +NI PN VT+ GIL A H GL+ EG F M ++ G+ P + H
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 470 YGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLE 529
YG MVDL GR+G + EA I +MP +P+ +WG+LL R+ +++ E A++ I+L+
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELD 400
Query: 530 SDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G Y LLS++YA GRW + K +R ++ K + K PGCS+ +
Sbjct: 401 PMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVE 445
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 187/349 (53%), Gaps = 20/349 (5%)
Query: 56 YVHPILHNLH-NPDSFSWGCVIRFFSQ---KGQFIEAVSLYVQMQRMGLCPTSHAISSAL 111
Y +PI H H +SF W +IR Q +S+Y++M+ + P H L
Sbjct: 10 YANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLL 69
Query: 112 KSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV 171
S G H Q+ + G D +V+T+LL++YS GD+ +A++VFD+ K++
Sbjct: 70 PSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLP 129
Query: 172 SWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM--PE 229
+WNS+++ Y KAG +D+A+ LFD++P ++VISW+ +I+GY G +A LF++M P+
Sbjct: 130 AWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPK 189
Query: 230 RNLA-------SWNTMIAGYIDSGSILSAREVFDAMPKRN-SVSLI---TMIAGYSKSGD 278
N A + +T+++ G++ + V + K + + ++ +I Y+K G
Sbjct: 190 PNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGS 249
Query: 279 VDSAHKLFDQM-DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
++ A ++F+ + +KD+ +Y+AMI C A E +LF+ M + N++P+ +T +
Sbjct: 250 LERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD-NINPNSVTFVGI 308
Query: 338 ISACSQLGDL-EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
+ AC G + E + + I +FG+ +VDLY +SG I +A
Sbjct: 309 LGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEA 357
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 288/565 (50%), Gaps = 31/565 (5%)
Query: 8 TLMKKCSTLNH---AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
+L+ C N +Q+HAH + +GL L + + N L I N
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFN---LLDEAQTITENS 144
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
W +I + + +F E+VS+Y +M G+ S +K+CA + D G
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
+HG + V + +YV AL+ +Y + G V AR++FD M+E++ VSWN++++ Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 185 DLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA 240
L EA L D++ +++WN++ G +AGN A + M N+ + +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 241 GYIDSGSILSAR---EVFDAMPKRNSV----------SLITMIAGYSKSGDVDSAHKLFD 287
+ + S + A +VF + R+ SLITM YS+ D+ A +F
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM---YSRCSDLRHAFIVFQ 381
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
Q++ L ++N++I+ +A N + +E L ML HP+ +TLAS++ +++G+L
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASILPLFARVGNL 439
Query: 348 EHWRWIESHINDFGVVLDDH-LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
+H + +I D L +LVD+YAKSG I A +F +RKRD V Y+++I G
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVP 465
+G G+ A+ F+ M I P+ VT +L+A +H+ LV EG+W F M+ G+
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRL 559
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH- 524
++HY MVDL RAG+LD+A ++ +P +P++ + LL AC +H N +GE A
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKL 619
Query: 525 CIKLESDTVGYYSLLSSIYANLGRW 549
++ + + +G+Y LL+ +YA G W
Sbjct: 620 LLETKPEHLGHYMLLADMYAVTGSW 644
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 204/508 (40%), Gaps = 65/508 (12%)
Query: 105 HAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDE 164
++ +S L +C + + G +H G + + L+ YS + A+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 165 MAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQA 220
+ + WN L+ Y++ E+ ++ ++ K D ++ S+I A +D A
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC--AALLDFA 201
Query: 221 ------NSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYS 274
S+ NL N +I+ Y G + AR +FD M +R++VS +I Y+
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 275 KSGDVDSAHKLFDQM----DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPD 330
+ A KL D+M E ++++N + + AL M NV
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM--RNCNVRIG 319
Query: 331 KMTLASVISACSQLGDLE-----HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
+ + + + ACS +G L+ H I S + D++ +L+ +Y++ + A
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI---DNVRNSLITMYSRCSDLRHA 376
Query: 386 YELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHA 445
+ +F + L ++++I GF N R+ + L ++ML PN +T IL +
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 446 GLVEEG--YWCF----NSMKD-----NGLVPLVDH---------------------YGIM 473
G ++ G + C+ S KD N LV + Y +
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 474 VDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLACRLHNNVELGE---IAVQHCIK 527
+D GR G + A +M +P+ A+L AC N V G ++H
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKL 555
+ + +YS + +Y G D A+ +
Sbjct: 557 IRL-RLEHYSCMVDLYCRAGYLDKARDI 583
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/565 (30%), Positives = 288/565 (50%), Gaps = 31/565 (5%)
Query: 8 TLMKKCSTLNH---AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
+L+ C N +Q+HAH + +GL L + + N L I N
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFN---LLDEAQTITENS 144
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
W +I + + +F E+VS+Y +M G+ S +K+CA + D G
Sbjct: 145 EILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
+HG + V + +YV AL+ +Y + G V AR++FD M+E++ VSWN++++ Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 185 DLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA 240
L EA L D++ +++WN++ G +AGN A + M N+ + +
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 241 GYIDSGSILSAR---EVFDAMPKRNSV----------SLITMIAGYSKSGDVDSAHKLFD 287
+ + S + A +VF + R+ SLITM YS+ D+ A +F
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM---YSRCSDLRHAFIVFQ 381
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
Q++ L ++N++I+ +A N + +E L ML HP+ +TLAS++ +++G+L
Sbjct: 382 QVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS--GFHPNHITLASILPLFARVGNL 439
Query: 348 EHWRWIESHINDFGVVLDDH-LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
+H + +I D L +LVD+YAKSG I A +F +RKRD V Y+++I G
Sbjct: 440 QHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDG 499
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVP 465
+G G+ A+ F+ M I P+ VT +L+A +H+ LV EG+W F M+ G+
Sbjct: 500 YGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRL 559
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH- 524
++HY MVDL RAG+LD+A ++ +P +P++ + LL AC +H N +GE A
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKL 619
Query: 525 CIKLESDTVGYYSLLSSIYANLGRW 549
++ + + +G+Y LL+ +YA G W
Sbjct: 620 LLETKPEHLGHYMLLADMYAVTGSW 644
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/508 (21%), Positives = 204/508 (40%), Gaps = 65/508 (12%)
Query: 105 HAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDE 164
++ +S L +C + + G +H G + + L+ YS + A+ + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 165 MAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQA 220
+ + WN L+ Y++ E+ ++ ++ K D ++ S+I A +D A
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKAC--AALLDFA 201
Query: 221 ------NSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYS 274
S+ NL N +I+ Y G + AR +FD M +R++VS +I Y+
Sbjct: 202 YGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYT 261
Query: 275 KSGDVDSAHKLFDQM----DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPD 330
+ A KL D+M E ++++N + + AL M NV
Sbjct: 262 SEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGM--RNCNVRIG 319
Query: 331 KMTLASVISACSQLGDLE-----HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
+ + + + ACS +G L+ H I S + D++ +L+ +Y++ + A
Sbjct: 320 SVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI---DNVRNSLITMYSRCSDLRHA 376
Query: 386 YELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHA 445
+ +F + L ++++I GF N R+ + L ++ML PN +T IL +
Sbjct: 377 FIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARV 436
Query: 446 GLVEEG--YWCF----NSMKD-----NGLVPLVDH---------------------YGIM 473
G ++ G + C+ S KD N LV + Y +
Sbjct: 437 GNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSL 496
Query: 474 VDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLACRLHNNVELGE---IAVQHCIK 527
+D GR G + A +M +P+ A+L AC N V G ++H
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKL 555
+ + +YS + +Y G D A+ +
Sbjct: 557 IRL-RLEHYSCMVDLYCRAGYLDKARDI 583
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 259/496 (52%), Gaps = 42/496 (8%)
Query: 88 AVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLD 147
+ ++ QMQ + P + S LK+C R+ D G IH Q+ + YV + L+D
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 148 LYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSM 207
+Y+K+G + TA W+ L+ + GKDV+SW +M
Sbjct: 534 MYAKLGKLDTA--------------WDILI-----------------RFAGKDVVSWTTM 562
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI 267
I+GY++ D+A + F++M +R + S + + + + L A + + + VS
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 268 T--------MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNY 319
+ ++ YS+ G ++ ++ F+Q + D +++NA+++ + Q+ +EAL +F
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 320 MLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
M + I+ + T S + A S+ +++ + + + I G + + AL+ +YAK
Sbjct: 683 MNREGID--NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 380 GSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
GSI A + F + ++ V+++A+I + +G S+A+ F+QM+ N+ PN VT G+L
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Query: 440 TAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN 498
+A +H GLV++G F SM GL P +HY +VD+L RAG L A E I MP +P+
Sbjct: 801 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860
Query: 499 ADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMG 558
A VW LL AC +H N+E+GE A H ++LE + Y LLS++YA +WD R
Sbjct: 861 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 920
Query: 559 VKGKNVIKTPGCSWTQ 574
+K K V K PG SW +
Sbjct: 921 MKEKGVKKEPGQSWIE 936
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 229/503 (45%), Gaps = 41/503 (8%)
Query: 20 KQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFF 79
+QIHA IL GL + I L+ N + L+ V L D SW +I
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRV---FDGLRLKDHSSWVAMISGL 263
Query: 80 SQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCV 139
S+ EA+ L+ M +G+ PT +A SS L +C +I+ G +HG V LG+ +
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 140 YVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI--- 196
YV AL+ LY +G++ +A +F M++++ V++N+L++G + G ++A LF ++
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 197 ---PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSARE 253
P + ++ S++ S G + + L + AS N + G++L+
Sbjct: 384 GLEPDSNTLA--SLVVACSADGTLFRGQQLHAYTTKLGFASNNKI------EGALLNL-- 433
Query: 254 VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEA 313
Y+K D+++A F + + ++++ +N M+ Y + +
Sbjct: 434 -------------------YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNS 474
Query: 314 LELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALV 373
+F M EI P++ T S++ C +LGDLE I S I L+ ++ + L+
Sbjct: 475 FRIFRQMQIEEIV--PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 374 DLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLV 433
D+YAK G +D A+++ +D+V+++ MI G+ A+ F QML I + V
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEV 592
Query: 434 TYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
T ++A ++EG +G + +V L R G ++E+Y L
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQ 651
Query: 494 PTQPNADVWGALLLACRLHNNVE 516
+ W AL+ + N E
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNE 674
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 242/570 (42%), Gaps = 82/570 (14%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYV------QMQRM------GLCPT 103
++H + L F C R S A+S+Y+ Q +R+ G+ P
Sbjct: 29 FIHGVPRKLKTRTVFPTLCGTRRAS-----FAAISVYISEDESFQEKRIDSVENRGIRPN 83
Query: 104 SHAISSALKSCARIQDKLG-GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVF 162
+ L+ C + L G +H Q+ LG D+ + L D Y GD+ A KVF
Sbjct: 84 HQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVF 143
Query: 163 DEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANS 222
DEM E+ + +WN ++ + E LF ++ ++V SG +A + S
Sbjct: 144 DEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC---RGGS 200
Query: 223 LFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSA 282
+ + E+ + AR ++ + + ++V +I YS++G VD A
Sbjct: 201 VAFDVVEQ------------------IHARILYQGL-RDSTVVCNPLIDLYSRNGFVDLA 241
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
++FD + KD S+ AMI+ ++N EA+ LF M + + P +SV+SAC
Sbjct: 242 RRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV--LGIMPTPYAFSSVLSACK 299
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
++ LE + + G D ++ ALV LY G++ A +F + +RD V Y+
Sbjct: 300 KIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNT 359
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY---------- 452
+I G G A++LF++M + + P+ T ++ A + G + G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 453 WCFNSMKDNGLVPL----------VDHY-----------GIMVDLLGRAGWLDEAYELII 491
+ N+ + L+ L +D++ +M+ G L ++ +
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 492 NMPTQ---PNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY-SLLSSIYANLG 547
M + PN + ++L C ++ELGE IK Y S+L +YA LG
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 548 RWDDAKKLRMGVKGKNVIKTPGCSWTQRVS 577
+ D A + + GK+V+ SWT ++
Sbjct: 540 KLDTAWDILIRFAGKDVV-----SWTTMIA 564
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 164/338 (48%), Gaps = 34/338 (10%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
IL D SW +I ++Q +A++ + QM G+ +++A+ +CA +Q
Sbjct: 547 ILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQA 606
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G IH Q V G+ + + Q AL+ LYS+ G + + F++ + ++WN+L+SG
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 180 YLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPERNLASW 235
+ ++G+ +EA +F ++ + + ++ S + S+ NM Q + + +
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK------ 720
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
GY + +A +I+ Y+K G + A K F ++ K+ +
Sbjct: 721 ----TGYDSETEVCNA-----------------LISMYAKCGSISDAEKQFLEVSTKNEV 759
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH-WRWIE 354
S+NA+I Y+++ EAL+ F+ M+ NV P+ +TL V+SACS +G ++ + E
Sbjct: 760 SWNAIINAYSKHGFGSEALDSFDQMIHS--NVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
S +++G+ +VD+ ++G + +A E +
Sbjct: 818 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEM 855
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 147/321 (45%), Gaps = 21/321 (6%)
Query: 6 LTTLMKKCS---TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
LT + C+ L +QIHA ++G P + L+ S+
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLA---FE 650
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
D+ +W ++ F Q G EA+ ++V+M R G+ + SA+K+ + +
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H + GYD+ V AL+ +Y+K G + A K F E++ KN VSWN++++ Y K
Sbjct: 711 GKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 183 AGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKM-PERNLASWNT 237
G EA FD++ +V ++ ++S S G +D+ + F+ M E L+
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 238 MIAGYID----SGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVD----SAHKLFDQ 288
+D +G + A+E MP K +++ T+++ +++ +AH L +
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLL-E 889
Query: 289 MDEKDLLSYNAMIACYAQNSK 309
++ +D +Y + YA + K
Sbjct: 890 LEPEDSATYVLLSNLYAVSKK 910
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/599 (28%), Positives = 291/599 (48%), Gaps = 89/599 (14%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
+ + + +W +I +++ E ++L+++MQ G P S ++AL A
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G+ +H V G D + V +L++LY K G+V AR +FD+ K+VV+WNS++
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 178 SGYLKAGDLDEAQHLF----------DKIPGKDVISW----------------------- 204
SGY G EA +F + VI
Sbjct: 268 SGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL 327
Query: 205 ------NSMISGYSKAGNMDQANSLFQKMP-ERNLASWNTMIAGYIDSGSILSAREVFDA 257
+++ YSK M A LF+++ N+ SW MI+G++ + A ++F
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 258 MPK-----------------------------------RNSVSLITMIAGYSKSGDVDSA 282
M + R+S ++ Y K G V+ A
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
K+F +D+KD+++++AM+A YAQ + + A+++F + K + P++ T +S+++ C+
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG--GIKPNEFTFSSILNVCA 505
Query: 343 QL------GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRD 396
G H I+S ++ V ++AL+ +YAK G+I+ A E+F R++D
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCV-----SSALLTMYAKKGNIESAEEVFKRQREKD 560
Query: 397 LVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
LV++++MI G+ +G+A A+ +F++M + + VT+ G+ A HAGLVEEG F+
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFD 620
Query: 457 SM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNV 515
M +D + P +H MVDL RAG L++A ++I NMP + +W +L ACR+H
Sbjct: 621 IMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKT 680
Query: 516 ELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
ELG +A + I ++ + Y LLS++YA G W + K+R + +NV K PG SW +
Sbjct: 681 ELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 216/467 (46%), Gaps = 96/467 (20%)
Query: 61 LHNLHN-------PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
L+N HN D S+ ++ FS+ G+ EA L++ + R+G+ SS LK
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSW 173
A + D+L G +H Q G+ V V T+L+D Y K + RKVFDEM E+NVV+W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPG----------------------------------- 198
+L+SGY + DE LF ++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 199 ----KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREV 254
K + NS+I+ Y K GN+ +A LF K +++ +WN+MI+GY +G L A +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 255 FDAMPKRNSVSL----------------------------------------ITMIAGYS 274
F +M + N V L ++ YS
Sbjct: 283 FYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 275 KSGDVDSAHKLFDQMD-EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
K + A +LF ++ +++S+ AMI+ + QN +EA++LF+ M + V P++ T
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK--GVRPNEFT 399
Query: 334 LASVISACSQLGDLE-HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
+ +++A + E H + ++++ V TAL+D Y K G +++A ++F G+
Sbjct: 400 YSVILTALPVISPSEVHAQVVKTNYERSSTV-----GTALLDAYVKLGKVEEAAKVFSGI 454
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
+D+VA+SAM+ G+ G AIK+F ++ I PN T++ IL
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 185/434 (42%), Gaps = 56/434 (12%)
Query: 179 GYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTM 238
G + + L A +LFDK PG+D S+ S++ G+S+ G +A LF + + ++
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 239 IAGYIDSGSILSAREVFDAMPKRNSVSL---------ITMIAGYSKSGDVDSAHKLFDQM 289
+ + + L E+F + +++ Y K + K+FD+M
Sbjct: 96 FSSVLKVSATL-CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
E++++++ +I+ YA+NS E L LF M P+ T A+ + ++ G
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE--GTQPNSFTFAAALGVLAEEGVGGR 212
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
+ + + G+ ++ +L++LY K G++ KA LF + +V +++MI G+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 410 NGRASDAIKLFEQM--------------------------LGENIGPNLVTY-------- 435
NG +A+ +F M E + ++V Y
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 436 -TGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP 494
T ++ AY+ + + F K+ G V V + M+ + +EA +L M
Sbjct: 333 RTALMVAYSKCTAMLDALRLF---KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 495 ---TQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDD 551
+PN + +L A + + E+ V+ + S TVG + L Y LG+ ++
Sbjct: 390 RKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYE-RSSTVG--TALLDAYVKLGKVEE 446
Query: 552 AKKLRMGVKGKNVI 565
A K+ G+ K+++
Sbjct: 447 AAKVFSGIDDKDIV 460
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/587 (27%), Positives = 295/587 (50%), Gaps = 82/587 (13%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D W ++ +++ G + + M+ + P + L CA GV +H
Sbjct: 203 DCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
G V V G D ++ +LL +YSK G A K+F M+ + V+WN ++SGY+++G ++
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 188 EAQHLFDKIPGK----DVISWNSMISGYSKAGNMD------------------------- 218
E+ F ++ D I+++S++ SK N++
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 219 ----------QANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK----RNSV 264
A ++F + ++ + MI+GY+ +G + + E+F + K N +
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442
Query: 265 SLITM-----------------------------------IAGYSKSGDVDSAHKLFDQM 289
+L+++ I Y+K G ++ A+++F+++
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
++D++S+N+MI AQ+ P A+++F M I D +++++ +SAC+ L
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY--DCVSISAALSACANLPSESF 560
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
+ I + + D + + L+D+YAK G++ A +F ++++++V+++++I G
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620
Query: 410 NGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLV 467
+G+ D++ LF +M+ ++ I P+ +T+ I+++ H G V+EG F SM +D G+ P
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQ 680
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
+HY +VDL GRAG L EAYE + +MP P+A VWG LL ACRLH NVEL E+A +
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD 740
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
L+ GYY L+S+ +AN W+ K+R +K + V K PG SW +
Sbjct: 741 LDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 146/600 (24%), Positives = 261/600 (43%), Gaps = 93/600 (15%)
Query: 2 VATKLTTLMKKCST---LNHAKQIHAHILINGL----HHLEPLFIHHILLWDVNNYKPLS 54
+ +L+ L++ CS L KQ+HA +++N + + E + + + ++ +
Sbjct: 34 IPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF 93
Query: 55 HYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSC 114
+ + +L W +I F + G +A++ Y +M G+ P +K+C
Sbjct: 94 YRL-----DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 115 ARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
+++ G + V LG D +V ++L+ Y + G + K+FD + +K+ V WN
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 175 SLLSGYLKAGDLDEAQHLF-----DKIP--------------------------GKDVIS 203
+L+GY K G LD F D+I G V+S
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 204 W--------NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG--------- 246
NS++S YSK G D A+ LF+ M + +WN MI+GY+ SG
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 247 ----------------SILSAREVFDAMP---------KRNSVSL-----ITMIAGYSKS 276
S+L + F+ + R+S+SL +I Y K
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 277 GDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
V A +F Q + D++ + AMI+ Y N ++LE+F +++K + + P+++TL S
Sbjct: 389 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVK--VKISPNEITLVS 446
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRD 396
++ L L+ R + I G ++ A++D+YAK G ++ AYE+F L KRD
Sbjct: 447 ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRD 506
Query: 397 LVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
+V++++MI + S AI +F QM I + V+ + L+A + G
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 457 SMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVE 516
M + L V ++D+ + G L A + M + N W +++ AC H ++
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAACGNHGKLK 625
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 14/214 (6%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
+ I L D SW +I +Q A+ ++ QM G+C +IS+AL +CA +
Sbjct: 496 YEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANL 555
Query: 118 QDKLGGVSIHGQV--HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
+ G +IHG + H L D VY ++ L+D+Y+K G++ A VF M EKN+VSWNS
Sbjct: 556 PSESFGKAIHGFMIKHSLASD--VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGK-----DVISWNSMISGYSKAGNMDQANSLFQKMPER 230
+++ G L ++ LF ++ K D I++ +IS G++D+ F+ M E
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Query: 231 -NLASWNTMIAGYID----SGSILSAREVFDAMP 259
+ A +D +G + A E +MP
Sbjct: 674 YGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMP 707
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 175/406 (43%), Gaps = 57/406 (14%)
Query: 4 TKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
+ L + K L + KQIH +I+ + + +F+ L+ + +S I
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISL--DIFLTSALIDAYFKCRGVS-MAQNIFSQ 400
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
++ D + +I + G +I+++ ++ + ++ + P + S L + G
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
+HG + G+D + A++D+Y+K G + A ++F+ ++++++VSWNS+++ ++
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQS 520
Query: 184 GDLDEAQHLFDK----------------------IPGK-----------------DVISW 204
+ A +F + +P + DV S
Sbjct: 521 DNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR--- 261
+++I Y+K GN+ A ++F+ M E+N+ SWN++IA + G + + +F M ++
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 262 --NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS-----YNAMIACYAQNSKPKEAL 314
+ ++ + +I+ GDVD + F M E + Y ++ + + + EA
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
E M P PD +++ AC ++E S + D
Sbjct: 701 ETVKSMPFP-----PDAGVWGTLLGACRLHKNVELAEVASSKLMDL 741
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 177/653 (27%), Positives = 307/653 (47%), Gaps = 93/653 (14%)
Query: 8 TLMKKCST---LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHY--VHPILH 62
+L+ CS+ L ++IH HIL N + + +HIL + Y +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHIL-NSNCKYDTILNNHIL----SMYGKCGSLRDAREVFD 126
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
+ + S+ VI +SQ GQ EA+ LY++M + L P A S +K+CA D
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H QV L + + Q AL+ +Y + + A +VF + K+++SW+S+++G+ +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 183 AG-DLDEAQHLFDKIP---------------------------------------GKDVI 202
G + + HL + + + I
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 203 SWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR- 261
+ S+ Y++ G ++ A +F ++ + ASWN +IAG ++G A VF M
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 262 ---NSVSLITMIAG-----------------------------------YSKSGDVDSAH 283
+++SL +++ Y+ D+
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 284 KLF-DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
LF D + D +S+N ++ Q+ +P E L LF ML E PD +T+ +++ C
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE--CEPDHITMGNLLRGCV 484
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
++ L+ + + G+ + + L+D+YAK GS+ +A +F + RD+V++S
Sbjct: 485 EISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWST 544
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DN 461
+I G+ +G +A+ LF++M I PN VT+ G+LTA +H GLVEEG + +M+ ++
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIA 521
G+ P +H +VDLL RAG L+EA I M +P+ VW LL AC+ NV L + A
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKA 664
Query: 522 VQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
++ +K++ + LL S++A+ G W++A LR +K +V K PG SW +
Sbjct: 665 AENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIE 717
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 147/308 (47%), Gaps = 30/308 (9%)
Query: 213 KAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM----PKRNSVSLIT 268
+A + Q NS F+ L ++ ++I S S+ R++ D + K +++
Sbjct: 52 EAFDFAQKNSSFKI----RLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNH 107
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
+++ Y K G + A ++FD M E++L+SY ++I Y+QN + EA+ L+ ML+ ++
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLV-- 165
Query: 329 PDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL--ATALVDLYAKSGSIDKAY 386
PD+ S+I AC+ D+ + + + + + HL AL+ +Y + + A
Sbjct: 166 PDQFAFGSIIKACASSSDVGLGKQLHAQV--IKLESSSHLIAQNALIAMYVRFNQMSDAS 223
Query: 387 ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENI-GPNLVTYTGILTAYNHA 445
+F+G+ +DL+++S++I GF G +A+ ++ML + PN + L A +
Sbjct: 224 RVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC--S 281
Query: 446 GLVEEGY------WCFNS-MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN 498
L+ Y C S + N + + D+ R G+L+ A + + +P+
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCS-----LCDMYARCGFLNSARR-VFDQIERPD 335
Query: 499 ADVWGALL 506
W ++
Sbjct: 336 TASWNVII 343
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 47/286 (16%)
Query: 311 KEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLAT 370
+EALE F++ K + T S+I ACS L R I HI + D L
Sbjct: 48 REALEAFDFAQKNS-SFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNN 106
Query: 371 ALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGP 430
++ +Y K GS+ A E+F + +R+LV+Y+++I G+ NG+ ++AI+L+ +ML E++ P
Sbjct: 107 HILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 431 NLVTYTGILTAYNHAGLVEEG-------------------------YWCFNSMKDNGLVP 465
+ + I+ A + V G Y FN M D V
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRV- 225
Query: 466 LVDHYGI-MVDLL---------GRAGWLDEAYELIINMPT----QPNADVWGALLLACRL 511
YGI M DL+ + G+ EA + M + PN ++G+ L AC
Sbjct: 226 ---FYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSS 282
Query: 512 HNNVELGEIAVQHCIK--LESDTVGYYSLLSSIYANLGRWDDAKKL 555
+ G CIK L + + S L +YA G + A+++
Sbjct: 283 LLRPDYGSQIHGLCIKSELAGNAIAGCS-LCDMYARCGFLNSARRV 327
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 256/440 (58%), Gaps = 19/440 (4%)
Query: 151 KMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL--DEAQHLFDKIPGKDVISWNSMI 208
++ ++ AR +FD + N + ++L+ Y + L A F + + V N I
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFI 128
Query: 209 -------SGY-SKAGNMDQANS-LFQKMPERNLASWNTMIAGYIDSGS-ILSAREVFDAM 258
+ Y S A + ++ LF+ + ++ Y S S I AR++FD M
Sbjct: 129 YPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEM 188
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFN 318
+RN VS M++GY++SGD+ +A LF+ M E+D+ S+NA++A QN EA+ LF
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 319 YMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAK 378
M+ E ++ P+++T+ V+SAC+Q G L+ + I + + D ++ +LVDLY K
Sbjct: 249 RMIN-EPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGK 307
Query: 379 SGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG---PNLVTY 435
G++++A +F K+ L A+++MI F ++GR+ +AI +FE+M+ NI P+ +T+
Sbjct: 308 CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 436 TGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP 494
G+L A H GLV +G F+ M + G+ P ++HYG ++DLLGRAG DEA E++ M
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427
Query: 495 TQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKK 554
+ + +WG+LL AC++H +++L E+AV++ + L + GY ++++++Y +G W++A++
Sbjct: 428 MKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARR 487
Query: 555 LRMGVKGKNVIKTPGCSWTQ 574
R +K +N K PG W++
Sbjct: 488 ARKMIKHQNAYKPPG--WSR 505
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 214/426 (50%), Gaps = 26/426 (6%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLS----HYVHPIL 61
++ ++ K LNH KQ+ + ++++GL H H L + + + L Y I
Sbjct: 27 ISAVISKSRHLNHLKQVQSFMIVSGLSH------SHFLCFKLLRFCTLRLCNLSYARFIF 80
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQF--IEAVSLYVQMQRMGLCPTSHAISS-ALKSCARIQ 118
P++ + V+ +S A S + M + +H I LKS +
Sbjct: 81 DRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLS 140
Query: 119 DKLGGVSIHGQVHVLGYDTCVYVQTALLDLY-SKMGDVGTARKVFDEMAEKNVVSWNSLL 177
+H + G+ V VQTALL Y S + + AR++FDEM+E+NVVSW ++L
Sbjct: 141 SAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAML 200
Query: 178 SGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER-----NL 232
SGY ++GD+ A LF+ +P +DV SWN++++ ++ G +A SLF++M N
Sbjct: 201 SGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNE 260
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQ 288
+ +++ +G++ A+ + +R+ S + +++ Y K G+++ A +F
Sbjct: 261 VTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKM 320
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN-VHPDKMTLASVISACSQLGDL 347
+K L ++N+MI C+A + + +EA+ +F M+K IN + PD +T +++AC+ G +
Sbjct: 321 ASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLV 380
Query: 348 EHWR-WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIY 405
R + + N FG+ L+DL ++G D+A E+ ++ K D + +++
Sbjct: 381 SKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLN 440
Query: 406 GFGING 411
I+G
Sbjct: 441 ACKIHG 446
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 290/585 (49%), Gaps = 87/585 (14%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D +W ++ + G+ ++A+ ++ M G+ P + + S ++ CA + S+H
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKV-------------------------- 161
GQ+ +D + +LL +YSK GD+ ++ ++
Sbjct: 226 GQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSE 285
Query: 162 -----FDEMA----EKNVVSWNSLLSG--------------------------------- 179
F EM E N+V+ S+LS
Sbjct: 286 KALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLAL 345
Query: 180 ---YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
Y + G L + + + + +++++WNS+IS Y+ G + QA LF++M + +
Sbjct: 346 VELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDA 405
Query: 237 TMIAGYI----DSGSILSAREVF------DAMPKRNSVSLITMIAGYSKSGDVDSAHKLF 286
+A I ++G + +++ D + SLI M YSKSG VDSA +F
Sbjct: 406 FTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDM---YSKSGSVDSASTVF 462
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
+Q+ + ++++N+M+ ++QN EA+ LF+YM + + +++T +VI ACS +G
Sbjct: 463 NQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM--NEVTFLAVIQACSSIGS 520
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
LE +W+ + G+ D TAL+D+YAK G ++ A +F + R +V++S+MI
Sbjct: 521 LEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINA 579
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPL 466
+G++GR AI F QM+ PN V + +L+A H+G VEEG + FN MK G+ P
Sbjct: 580 YGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPN 639
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCI 526
+H+ +DLL R+G L EAY I MP +A VWG+L+ CR+H +++ +
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLS 699
Query: 527 KLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+ +D GYY+LLS+IYA G W++ ++LR +K N+ K PG S
Sbjct: 700 DIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 244/519 (47%), Gaps = 59/519 (11%)
Query: 4 TKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
T+ L + CS+L Q+HAH+L+ G +PL + ++ P S + +
Sbjct: 2 TQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRL--VFEA 59
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG- 122
PDSF +G +I+ A+ LY ++ + S L++CA ++ L
Sbjct: 60 FPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSV 119
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +HG++ G D ++T+LL +Y + G++ A KVFD M +++V+W++L+S L+
Sbjct: 120 GGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLE 179
Query: 183 AGDLDEAQHLF----DKIPGKDVISWNSMISGYSKAGNMDQANS----LFQKMPERNLAS 234
G++ +A +F D D ++ S++ G ++ G + A S + +KM + +
Sbjct: 180 NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETL 239
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
N+++ Y G +LS+ +F+ + K+N+VS MI+ Y++ + EK L
Sbjct: 240 CNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG-----------EFSEKAL 288
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
S++ MI + + P+ +TL SV+S+C +G + +
Sbjct: 289 RSFSEMI----------------------KSGIEPNLVTLYSVLSSCGLIGLIREGK--- 323
Query: 355 SHINDFGVVLD-----DHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
++ F V + + L+ ALV+LYA+ G + + + R++VA++++I +
Sbjct: 324 -SVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDH 469
G A+ LF QM+ + I P+ T ++A +AGLV G + + D
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT---DVSDE 439
Query: 470 Y--GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+ ++D+ ++G +D A + N + W ++L
Sbjct: 440 FVQNSLIDMYSKSGSVDSA-STVFNQIKHRSVVTWNSML 477
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 221/458 (48%), Gaps = 53/458 (11%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+L + + + +W +I ++ +G I+A+ L+ QM + P + ++S++ +C
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 120 KLGGVSIHGQVHVLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
G IHG HV+ D +VQ +L+D+YSK G V +A VF+++ ++VV+WNS+L
Sbjct: 421 VPLGKQIHG--HVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLC 478
Query: 179 GYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS 234
G+ + G+ EA LFD + + +++ ++I S G++++ + K+
Sbjct: 479 GFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL------- 531
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
+I+G +++F +LI M Y+K GD+++A +F M + +
Sbjct: 532 ---IISGL---------KDLF------TDTALIDM---YAKCGDLNAAETVFRAMSSRSI 570
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+S+++MI Y + + A+ FN M+ E P+++ +V+SAC G +E ++
Sbjct: 571 VSWSSMINAYGMHGRIGSAISTFNQMV--ESGTKPNEVVFMNVLSACGHSGSVEEGKYYF 628
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING--- 411
+ + FGV + +DL ++SG + +AY +++ +A A ++G +NG
Sbjct: 629 NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRT---IKEMPFLA-DASVWGSLVNGCRI 684
Query: 412 -RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
+ D IK + L + + + YT + Y G EE ++MK + L + +
Sbjct: 685 HQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Query: 471 GIMVDL-LGRAG-------WLDEAYELIINMPTQPNAD 500
I +D + R G DE Y + N+ N +
Sbjct: 745 AIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEE 782
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 215/337 (63%), Gaps = 5/337 (1%)
Query: 238 MIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD--EKDLL 295
+I Y G + AR++FD M ++ ++AGY K G++D A L + M ++ +
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEV 216
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
S+ +I+ YA++ + EA+E+F ML NV PD++TL +V+SAC+ LG LE I S
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLME--NVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
+++ G+ L A++D+YAKSG+I KA ++F + +R++V ++ +I G +G ++
Sbjct: 275 YVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAE 334
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMV 474
A+ +F +M+ + PN VT+ IL+A +H G V+ G FNSM+ G+ P ++HYG M+
Sbjct: 335 ALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMI 394
Query: 475 DLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVG 534
DLLGRAG L EA E+I +MP + NA +WG+LL A +H+++ELGE A+ IKLE + G
Sbjct: 395 DLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSG 454
Query: 535 YYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
Y LL+++Y+NLGRWD+++ +R +KG V K G S
Sbjct: 455 NYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGES 491
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 254/518 (49%), Gaps = 45/518 (8%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
+T+L + L KQ H +++I GL+ + L + + +N L Y + + +
Sbjct: 18 VTSLKIHGNNLKTLKQSHCYMIITGLNR-DNLNVAK-FIEACSNAGHL-RYAYSVFTHQP 74
Query: 66 NPDSFSWGCVIRFFS---QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
P+++ +IR S + A+++Y ++ + P + LK R+ D
Sbjct: 75 CPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWF 134
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G IHGQV V G+D+ V+V T L+ +Y G +G ARK+FDEM K+V WN+LL+GY K
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 183 AGDLDEAQHLFDKIPG--KDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWN 236
G++DEA+ L + +P ++ +SW +ISGY+K+G +A +FQ+M N+ +
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL 254
Query: 237 TMIAGYIDSGSILSAREVFDAMPKR---NSVSL-ITMIAGYSKSGDVDSAHKLFDQMDEK 292
+++ D GS+ + + R +VSL +I Y+KSG++ A +F+ ++E+
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 314
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG--DLEHW 350
+++++ +IA A + EAL +FN M+K V P+ +T +++SACS +G DL
Sbjct: 315 NVVTWTTIIAGLATHGHGAEALAMFNRMVKA--GVRPNDVTFIAILSACSHVGWVDLGK- 371
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR-------DLVAYSAM 403
R S + +G+ + ++DL ++G + +A E+ + + L+A S +
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNV 431
Query: 404 IYGFGINGRA-SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+ + RA S+ IKL G Y + Y++ G +E N MK G
Sbjct: 432 HHDLELGERALSELIKLEPNNSG--------NYMLLANLYSNLGRWDESRMMRNMMKGIG 483
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNAD 500
+ + I V+ + Y+ I T P +
Sbjct: 484 VKKMAGESSIEVE--------NRVYKFISGDLTHPQVE 513
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/335 (38%), Positives = 208/335 (62%), Gaps = 3/335 (0%)
Query: 238 MIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
+I+ Y + G + S +VF+++P + V M+ ++ GDV A KLF+ M E+D +++
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
NAMI+ YAQ + +EAL +F+ M + V + + + SV+SAC+QLG L+ RW S+I
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKV--NGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
+ + LAT LVDLYAK G ++KA E+F G+ ++++ +S+ + G +NG +
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 418 KLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDL 476
+LF M + + PN VT+ +L + G V+EG F+SM++ G+ P ++HYG +VDL
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY 536
RAG L++A +I MP +P+A VW +LL A R++ N+ELG +A + ++LE+ G Y
Sbjct: 387 YARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAY 446
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
LLS+IYA+ WD+ +R +K K V K PGCS
Sbjct: 447 VLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 204/390 (52%), Gaps = 16/390 (4%)
Query: 15 TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGC 74
T +QIHA + ++G + L H + ++++K L Y + IL P F+
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLD-YANQILDRSEKPTLFALNS 76
Query: 75 VIRFFSQKGQFIEAVSLYVQMQRMG--LCPTSHAISSALKSCARIQDKLGGVSIHGQVHV 132
+IR + ++ Y ++ G L P ++ ++ +++C ++ + G+ +HG
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 133 LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHL 192
G+D +VQT L+ LY+++G + + KVF+ + + V ++++ + GD+ A+ L
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 193 FDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSI 248
F+ +P +D I+WN+MISGY++ G +A ++F M + N + ++++ G++
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 249 LSAREVFDAMPKRNSVSL-----ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIAC 303
R + +RN + + T++ Y+K GD++ A ++F M+EK++ ++++ +
Sbjct: 257 DQGRWAHSYI-ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWRWIESHINDFGV 362
A N ++ LELF+ M + V P+ +T SV+ CS +G + E R +S N+FG+
Sbjct: 316 LAMNGFGEKCLELFSLM--KQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGI 373
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGL 392
LVDLYA++G ++ A + +
Sbjct: 374 EPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 119/259 (45%), Gaps = 32/259 (12%)
Query: 279 VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
+D A+++ D+ ++ L + N+MI + ++ P+++ + + +L ++ PD T+ ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK-------------- 384
AC+ L E + G D H+ T L+ LYA+ G +D
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 385 -----------------AYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN 427
A +LF G+ +RD +A++AMI G+ G + +A+ +F M E
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 428 IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAY 487
+ N V +L+A G +++G W + ++ N + V +VDL + G +++A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 488 ELIINMPTQPNADVWGALL 506
E+ M + N W + L
Sbjct: 296 EVFWGM-EEKNVYTWSSAL 313
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 213/361 (59%), Gaps = 3/361 (0%)
Query: 221 NSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVD 280
+ F+ E + T+I Y G++ AR VFD M KR+ MI GY + GD+
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMK 165
Query: 281 SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA 340
+A +LFD M K++ S+ +I+ ++QN EAL++F M K + +V P+ +T+ SV+ A
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDK-SVKPNHITVVSVLPA 224
Query: 341 CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL-RKRDLVA 399
C+ LG+LE R +E + + G + ++ A +++Y+K G ID A LF L +R+L +
Sbjct: 225 CANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCS 284
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
+++MI +G+ +A+ LF QML E P+ VT+ G+L A H G+V +G F SM+
Sbjct: 285 WNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Query: 460 D-NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELG 518
+ + + P ++HYG M+DLLGR G L EAY+LI MP +P+A VWG LL AC H NVE+
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Query: 519 EIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQRVSL 578
EIA + KLE G ++S+IYA +WD ++R +K + + K G S+ V +
Sbjct: 405 EIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGV 464
Query: 579 N 579
+
Sbjct: 465 D 465
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 203/427 (47%), Gaps = 49/427 (11%)
Query: 16 LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCV 75
+N KQ+HAH L G+ + L +L+ P Y + + N +F + +
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLI-------PNLVYARKLFDHHQNSCTFLYNKL 53
Query: 76 IRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY 135
I+ + Q E++ LY + GL P+ H + + A +H Q G+
Sbjct: 54 IQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK 195
++ + T L+ Y+K+G + AR+VFDEM++++V WN++++GY + GD+ A LFD
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 196 IPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN--TMIA--------GYIDS 245
+P K+V SW ++ISG+S+ GN +A +F M + N T+++ G ++
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 246 GSILS--ARE--VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQM-DEKDLLSYNAM 300
G L ARE FD + N+ I YSK G +D A +LF+++ ++++L S+N+M
Sbjct: 234 GRRLEGYARENGFFDNIYVCNAT-----IEMYSKCGMIDVAKRLFEELGNQRNLCSWNSM 288
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG----------DLEHW 350
I A + K EAL LF ML+ PD +T ++ AC G +E
Sbjct: 289 IGSLATHGKHDEALTLFAQMLRE--GEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEV 346
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL-RKRDLVAYSAMIYGFGI 409
I + +G ++DL + G + +AY+L + K D V + ++
Sbjct: 347 HKISPKLEHYG---------CMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSF 397
Query: 410 NGRASDA 416
+G A
Sbjct: 398 HGNVEIA 404
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 172/648 (26%), Positives = 302/648 (46%), Gaps = 86/648 (13%)
Query: 8 TLMKKCSTLNHAKQ---IHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
+++K C+ L A+ ++ IL G LF+ + L+ D+ + L + +
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFE--SDLFVGNALV-DMYSRMGLLTRARQVFDEM 167
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
D SW +I +S G + EA+ +Y +++ + P S +SS L + + G
Sbjct: 168 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
+HG G ++ V V L+ +Y K AR+VFDEM ++ VS+N+++ GYLK
Sbjct: 228 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 185 DLDEAQHLF---------DKIPGKDVIS-----------------------------WNS 206
++E+ +F D + V+ N
Sbjct: 288 MVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 207 MISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM----PKRN 262
+I Y+K G+M A +F M ++ SWN++I+GYI SG ++ A ++F M + +
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 263 SVSLITMIA-----------------------------------GYSKSGDVDSAHKLFD 287
++ + +I+ Y+K G+V + K+F
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
M D +++N +I+ + L++ M K E V PD T + C+ L
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE--VVPDMATFLVTLPMCASLAAK 525
Query: 348 EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGF 407
+ I + FG + + AL+++Y+K G ++ + +F + +RD+V ++ MIY +
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV-PL 466
G+ G A++ F M I P+ V + I+ A +H+GLV+EG CF MK + + P+
Sbjct: 586 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 645
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCI 526
++HY +VDLL R+ + +A E I MP +P+A +W ++L ACR ++E E + I
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705
Query: 527 KLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+L D GY L S+ YA L +WD +R +K K++ K PG SW +
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 253/525 (48%), Gaps = 50/525 (9%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
++ + S LN ++IHA ++ GL + F L+ ++++ + +
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSD--FFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+ + W +IR FS+ G F EA+ Y +++ + P + S +K+CA + D G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
++ Q+ +G+++ ++V AL+D+YS+MG + AR+VFDEM +++VSWNSL+SGY G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 186 LDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSL----FQKMPERNLASWNT 237
+EA ++ ++ D + +S++ + + Q L + + N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 238 MIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
++A Y+ AR VFD M R+SVS TMI GY K V+ + ++F
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF----------- 296
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
E L+ F PD +T++SV+ AC L DL ++I +++
Sbjct: 297 -------------LENLDQFK----------PDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
G VL+ + L+D+YAK G + A ++F+ + +D V+++++I G+ +G +A+
Sbjct: 334 LKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAM 393
Query: 418 KLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLL 477
KLF+ M+ + +TY +++ ++ G ++ +G+ + ++D+
Sbjct: 394 KLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 478 GRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV 522
+ G + ++ ++ +M T W ++ AC V G+ A
Sbjct: 454 AKCGEVGDSLKIFSSMGTGDTV-TWNTVISAC-----VRFGDFAT 492
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/398 (35%), Positives = 231/398 (58%), Gaps = 14/398 (3%)
Query: 189 AQHLFDKIPGK-DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNT-----MIAGY 242
A +F KI +V WN++I GY++ GN A SL+++M L +T +I
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 243 IDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYN 298
+ + + + SLI +++ Y+ GDV SA+K+FD+M EKDL+++N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
++I +A+N KP+EAL L+ M I PD T+ S++SAC+++G L + + ++
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIK 418
G+ + H + L+DLYA+ G +++A LF + ++ V+++++I G +NG +AI+
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 419 LFEQMLG-ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDL 476
LF+ M E + P +T+ GIL A +H G+V+EG+ F M++ + P ++H+G MVDL
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYY 536
L RAG + +AYE I +MP QPN +W LL AC +H + +L E A ++LE + G Y
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 537 SLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
LLS++YA+ RW D +K+R + V K PG S +
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 467
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 195/412 (47%), Gaps = 71/412 (17%)
Query: 6 LTTLMKKC---------STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVN-NYKPLSH 55
L +++KC S++ +QIHA + +G+ + H++ + V+ P
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 56 YVHPILHNLHNP-DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKS 113
Y H + + P + F W +IR +++ G I A SLY +M+ GL P +H +K+
Sbjct: 71 YAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSW 173
+ D G +IH V G+ + +YVQ +LL LY+ GDV +A KVFD+M EK++V+W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE 229
NS+++G+ + G +EA L+ ++ K D + S++S +K G + + M +
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK 250
Query: 230 ----RNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKL 285
RNL S N ++ Y G + A+ +FD M +NSVS ++I G
Sbjct: 251 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG------------- 297
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
A N KEA+ELF YM E + P ++T ++ ACS G
Sbjct: 298 ------------------LAVNGFGKEAIELFKYMESTE-GLLPCEITFVGILYACSHCG 338
Query: 346 ----DLEHWRW------IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
E++R IE I FG +VDL A++G + KAYE
Sbjct: 339 MVKEGFEYFRRMREEYKIEPRIEHFG---------CMVDLLARAGQVKKAYE 381
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 25/292 (8%)
Query: 9 LMKKCSTLNHAK---QIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L+K +T+ + IH+ ++ +G L +++ + LL N ++ + + +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSL--IYVQNSLLHLYANCGDVAS-AYKVFDKMP 183
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
D +W VI F++ G+ EA++LY +M G+ P I S L +CA K+G ++
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA----KIGALT 239
Query: 126 IHGQVHV----LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
+ +VHV +G ++ LLDLY++ G V A+ +FDEM +KN VSW SL+ G
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 182 KAGDLDEAQHLFDKIPGKD-----VISWNSMISGYSKAGNMDQANSLFQKMPER-----N 231
G EA LF + + I++ ++ S G + + F++M E
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 232 LASWNTMIAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSA 282
+ + M+ +G + A E +MP + N V T++ + GD D A
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/587 (28%), Positives = 300/587 (51%), Gaps = 42/587 (7%)
Query: 7 TTLMKKCSTLNHAK---QIHAHIL-----INGLHHLEPLFIHHILLWDVNNYKPLSHYVH 58
++++ C+ L+ + Q+HAH L +G+ L ++ +N +
Sbjct: 285 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYA----KCDNMQD----AQ 336
Query: 59 PILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQ 118
+ N N + S+ +I +SQ+ +A+ L+ ++ GL ++S ++CA ++
Sbjct: 337 ILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVK 396
Query: 119 DKLGGVSIHGQV--HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
G+ I+G L D CV A +D+Y K + A +VFDEM ++ VSWN++
Sbjct: 397 GLSEGLQIYGLAIKSSLSLDVCV--ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 177 LSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMI---SGYSKAGNMDQANSLFQKMPE 229
++ + + G E LF + D ++ S++ +G S M+ +S+ +
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMA 514
Query: 230 RNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQM 289
N + ++I Y G I A ++ +R +V SG ++ K+ ++
Sbjct: 515 SNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV-----------SGTMEELEKMHNKR 563
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
++ +S+N++I+ Y + ++A LF M+ E+ + PDK T A+V+ C+ L
Sbjct: 564 LQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM--EMGITPDKFTYATVLDTCANLASAGL 621
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
+ I + + + D ++ + LVD+Y+K G + + +F +RD V ++AMI G+
Sbjct: 622 GKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAH 681
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVD 468
+G+ +AI+LFE+M+ ENI PN VT+ IL A H GL+++G F MK D GL P +
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLP 741
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLH-NNVELGEIAVQHCIK 527
HY MVD+LG++G + A ELI MP + + +W LL C +H NNVE+ E A ++
Sbjct: 742 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 801
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
L+ Y+LLS++YA+ G W+ LR ++G + K PGCSW +
Sbjct: 802 LDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVE 848
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 157/652 (24%), Positives = 268/652 (41%), Gaps = 140/652 (21%)
Query: 3 ATKLTTLMKKCS---TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYK-------- 51
T + + K+C+ L KQ HAH++I+G F+ + LL N +
Sbjct: 48 TTNFSFVFKECAKQGALELGKQAHAHMIISGFR--PTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 52 ----PLSHYV--------HPILHNLHNPDSF----------SWGCVIRFFSQKGQFIEAV 89
PL V + +++ +SF SW ++ + Q G+ ++++
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSI 165
Query: 90 SLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLY 149
++V M R G+ + LK C+ ++D G+ IHG V +G DT V +ALLD+Y
Sbjct: 166 EVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMY 225
Query: 150 SKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP------------ 197
+K + +VF + EKN VSW+++++G ++ L A F ++
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 198 ---------------------------GKDVISWNSMISGYSKAGNMDQANSLFQKMPER 230
D I + + Y+K NM A LF
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 231 NLASWNTMIAGY----------------IDSG---SILSAREVFDA-------------- 257
N S+N MI GY + SG +S VF A
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 258 -MPKRNSVSLITMIAG-----YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPK 311
+ ++S+SL +A Y K + A ++FD+M +D +S+NA+IA + QN K
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGY 465
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATA 371
E L LF ML+ I PD+ T S++ AC+ G L + I S I G+ + + +
Sbjct: 466 ETLFLFVSMLRSRI--EPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 372 LVDLYAKSGSIDKA-------------------YELFHGLRKRDL-VAYSAMIYGFGING 411
L+D+Y+K G I++A E H R +++ V+++++I G+ +
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYG 471
++ DA LF +M+ I P+ TY +L + G + L V
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICS 642
Query: 472 IMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
+VD+ + G L ++ L+ + + W A++ H GE A+Q
Sbjct: 643 TLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGK---GEEAIQ 690
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/603 (27%), Positives = 304/603 (50%), Gaps = 92/603 (15%)
Query: 57 VHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCAR 116
V + N+ + +W +I ++ + G+ EA + M RM + P+ + + + +
Sbjct: 167 VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSI 226
Query: 117 IQDKLGGVSIHGQVHVLG--YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
+ +G + LG Y ++V ++ + +Y+++GD+ ++R+VFD E+N+ WN
Sbjct: 227 SRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 175 SLLSGYLKAGDLDEAQHLF-DKIPGKDVIS------------------------------ 203
+++ Y++ L E+ LF + I K+++S
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK 346
Query: 204 ---------WNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG-------- 246
NS++ YS+ G++ ++ +F M ER++ SWNTMI+ ++ +G
Sbjct: 347 NFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLML 406
Query: 247 -----------------SILSA------REVFD---AMPKRNSVSLITM----IAGYSKS 276
++LSA +E+ A R + M I YSKS
Sbjct: 407 VYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKS 466
Query: 277 GDVDSAHKLFDQMD--EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
G + + KLF+ E+D ++N+MI+ Y QN ++ +F ML E N+ P+ +T+
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML--EQNIRPNAVTV 524
Query: 335 ASVISACSQLGDLEHWRWIESHINDFGVVLDDHL--ATALVDLYAKSGSIDKAYELFHGL 392
AS++ ACSQ+G ++ + + H LD ++ A+ALVD+Y+K+G+I A ++F
Sbjct: 525 ASILPACSQIGSVDLGKQL--HGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
++R+ V Y+ MI G+G +G AI LF M I P+ +T+ +L+A +++GL++EG
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 453 WCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN-ADVWGALLLACR 510
F M++ + P +HY + D+LGR G ++EAYE + + + N A++WG+LL +C+
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCK 702
Query: 511 LHNNVELGEIAVQHCIKLE--SDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTP 568
LH +EL E + K + + GY LLS++YA +W K+R G++ K + K
Sbjct: 703 LHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEV 762
Query: 569 GCS 571
G S
Sbjct: 763 GRS 765
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 120/550 (21%), Positives = 232/550 (42%), Gaps = 74/550 (13%)
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPT--SHAISSALKSCARIQDKL 121
+ P + W +I F EA+ Y +M++ ++ SS LK+CA ++
Sbjct: 65 IPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLK 124
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G ++H + ++ V +L+++Y + A F+
Sbjct: 125 AGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN---APDCFE------------------ 163
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNT 237
D + +FD + K+V++WN++IS Y K G +A F M + S+
Sbjct: 164 ----YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVN 219
Query: 238 MIAGYIDSGSILSAREVFDAMPK------RNSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
+ S SI A + M K ++ + + I+ Y++ GD++S+ ++FD E
Sbjct: 220 VFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+++ +N MI Y QN E++ELF + + + D++T SA S L +E R
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK-EIVSDEVTYLLAASAVSALQQVELGR 338
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
++ L + +L+ +Y++ GS+ K++ +F +R+RD+V+++ MI F NG
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTA-----------YNHAGLVEEGY-------W 453
+ + L +M + + +T T +L+A HA L+ +G +
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY 458
Query: 454 CFNSMKDNGLVPLVDH--------------YGIMVDLLGRAGWLDEAYELIINMPTQ--- 496
+ +GL+ + + M+ + G ++ + + M Q
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 497 PNADVWGALLLACRLHNNVELGEIAVQHCIKLESD-TVGYYSLLSSIYANLGRWDDAKKL 555
PNA ++L AC +V+LG+ I+ D V S L +Y+ G A+ +
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDM 578
Query: 556 RMGVKGKNVI 565
K +N +
Sbjct: 579 FSQTKERNSV 588
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/463 (20%), Positives = 187/463 (40%), Gaps = 66/463 (14%)
Query: 172 SWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER- 230
S S LS + G+ A+ LFD IP + WN++I G+ +A + +M +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 231 -----NLASWNTMIAGYIDSGSILSAREVFDAMPK--RNSV-----SLITMIAGYSKSGD 278
+ ++++ + ++ ++ + + V + + +NS SL+ M + D
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 279 V---DSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
D K+FD M K+++++N +I+ Y + + EA F M++ E V P ++
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRME--VKPSPVSFV 218
Query: 336 SVISACSQLGDLEHWRWIESHINDFG--VVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+V A S ++ + G V D + ++ + +YA+ G I+ + +F
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLG-ENIGPNLVTY----------------- 435
+R++ ++ MI + N ++I+LF + +G + I + VTY
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 436 ------------------TGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLL 477
++ Y+ G V + + F SM++ +V + M+
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS----WNTMISAF 394
Query: 478 GRAGWLDEAYELIINMPTQP---NADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVG 534
+ G DE L+ M Q + ALL A N E+G+ I+ G
Sbjct: 395 VQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG 454
Query: 535 YYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQRVS 577
S L +Y+ G ++KL +G + +W +S
Sbjct: 455 MNSYLIDMYSKSGLIRISQKL---FEGSGYAERDQATWNSMIS 494
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/547 (28%), Positives = 265/547 (48%), Gaps = 83/547 (15%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPIL 61
+ L + + T QIHA +++ + + I+ P S+Y I
Sbjct: 5 LTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAP-SYYTRLIF 63
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
++ P+ F + ++FS+ + + LY Q R G+ P + + +KS R
Sbjct: 64 DSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF---- 119
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G+ V LG+ YV+ ++D+Y K V +ARKVFD+++++ WN ++SGY
Sbjct: 120 -GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG 241
K G+ +EA LFD +P DV+SW MI+G++K +++ A F +MPE+++ SWN M++G
Sbjct: 179 KWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSG 238
Query: 242 YIDSGSILSAREVFDAMPK--------------------------RNSVSLI-------- 267
Y +G A +F+ M + R+ V LI
Sbjct: 239 YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLN 298
Query: 268 -----TMIAGYSKSGDVDSAHKLF--------------------------------DQMD 290
++ ++K D+ SA ++F D M
Sbjct: 299 CFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP 358
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
+++++S+N++IA YA N + A+E F M+ + PD++T+ SV+SAC + DLE
Sbjct: 359 KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYG-DSKPDEVTMISVLSACGHMADLELG 417
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
I +I + L+D +L+ +YA+ G++ +A +F +++RD+V+Y+ + F N
Sbjct: 418 DCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAAN 477
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
G + + L +M E I P+ VTYT +LTA N AGL++EG F S+++ PL DHY
Sbjct: 478 GDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----PLADHY 533
Query: 471 GIMVDLL 477
M DLL
Sbjct: 534 ACM-DLL 539
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 178/630 (28%), Positives = 300/630 (47%), Gaps = 77/630 (12%)
Query: 9 LMKKCSTLNHAKQIHAHILINGL--------HHLEPLFIHHILLWDVNNYKPLSHYVHPI 60
L+ C T +Q+HA +L++ +L ++ LL D N V
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARN-------VFET 114
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ + D W +++ G + A+ LY M++ GL + + L++C R +
Sbjct: 115 VSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRAC-RYLGR 173
Query: 121 LGGV-SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G + H QV +G ++V LL LY K G +G A +F EM +N +SWN ++ G
Sbjct: 174 FGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKG 233
Query: 180 YLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASW 235
+ + D + A +F+ + + D ++W S++S +S+ G + F M A
Sbjct: 234 FSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVS 293
Query: 236 NTMIAGYIDSGSILSAREVFDA-------------MPKRNSVSLITMIAGYSKSGDVDSA 282
+A + + L A + + +P RN+ +I Y K G V A
Sbjct: 294 GEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNA-----LIHVYGKQGKVKDA 348
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELF------NYMLKPEINV--------- 327
LF Q+ K + S+N++I + K EAL LF N++ + NV
Sbjct: 349 EHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG 408
Query: 328 ----------------------HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD 365
+ +T+ ++S C++L L R I H+ + +
Sbjct: 409 CNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSEN 468
Query: 366 DHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLG 425
+ ALV++YAK G + + +F +R +DL++++++I G+G++G A A+ +F++M+
Sbjct: 469 ILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMIS 528
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLD 484
P+ + +L+A +HAGLVE+G F SM K GL P +HY +VDLLGR G+L
Sbjct: 529 SGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLK 588
Query: 485 EAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYA 544
EA E++ NMP +P V GALL +CR+H NV++ E LE + G Y LLS+IY+
Sbjct: 589 EASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYS 648
Query: 545 NLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
GRW+++ +R K K++ K G SW +
Sbjct: 649 AGGRWEESANVRALAKKKDLKKVSGSSWIE 678
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 274/487 (56%), Gaps = 23/487 (4%)
Query: 105 HAISSALKSCARIQD-KLGGVSIHGQVHVLGYDTCVYVQTALLDL------YSKMGDV-G 156
H + L+SC+ D K+ IHG + + V+V + LL L ++K ++ G
Sbjct: 13 HPKLALLQSCSSFSDLKI----IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLG 68
Query: 157 TARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYS 212
A +F ++ N+ +N L+ + + +A + ++ D I++ +I S
Sbjct: 69 YAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASS 128
Query: 213 KAGNM---DQANSLFQKMPERN-LASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLIT 268
+ + +Q +S + +N + N+++ Y + G I +A +F M R+ VS +
Sbjct: 129 EMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTS 188
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
M+AGY K G V++A ++FD+M ++L +++ MI YA+N+ ++A++LF +M + V
Sbjct: 189 MVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKRE--GVV 246
Query: 329 PDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
++ + SVIS+C+ LG LE ++ + ++ L TALVD++ + G I+KA +
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 389 FHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLV 448
F GL + D +++S++I G ++G A A+ F QM+ P VT+T +L+A +H GLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 449 EEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLL 507
E+G + +MK D+G+ P ++HYG +VD+LGRAG L EA I+ M +PNA + GALL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 508 ACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKT 567
AC+++ N E+ E IK++ + GYY LLS+IYA G+WD + LR +K K V K
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 568 PGCSWTQ 574
PG S +
Sbjct: 487 PGWSLIE 493
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 201/393 (51%), Gaps = 19/393 (4%)
Query: 8 TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLW----DVNNYKP--LSHYVHPIL 61
L++ CS+ + K IH +L H + +F+ LL D KP L Y + I
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRT--HLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
+ NP+ F + +IR FS + +A Y QM + + P + +K+ + ++ L
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G H Q+ G+ VYV+ +L+ +Y+ G + A ++F +M ++VVSW S+++GY
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG 241
K G ++ A+ +FD++P +++ +W+ MI+GY+K ++A LF+ M + + T++
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 242 YIDSGSILSAREVFD-----AMPKRNSVSLI---TMIAGYSKSGDVDSAHKLFDQMDEKD 293
I S + L A E + + +V+LI ++ + + GD++ A +F+ + E D
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
LS++++I A + +A+ F+ M+ + P +T +V+SACS G +E I
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMI--SLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 354 -ESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
E+ D G+ +VD+ ++G + +A
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 235/400 (58%), Gaps = 14/400 (3%)
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGY-- 242
D++ + +F + + N+MI +S + + LF+ + + N + + +
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 243 ---IDSGSILSAREV----FDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
I SG +L ++ F +S+ + T++ YS + A K+FD++ ++D +
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTV 180
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEIN--VHPDKMTLASVISACSQLGDLEHWRWI 353
S+N + +CY +N + ++ L LF+ M K +++ V PD +T + AC+ LG L+ + +
Sbjct: 181 SWNVLFSCYLRNKRTRDVLVLFDKM-KNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
I++ G+ +L+ LV +Y++ GS+DKAY++F+G+R+R++V+++A+I G +NG
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 414 SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN--GLVPLVDHYG 471
+AI+ F +ML I P T TG+L+A +H+GLV EG F+ M+ + P + HYG
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYG 359
Query: 472 IMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD 531
+VDLLGRA LD+AY LI +M +P++ +W LL ACR+H +VELGE + H I+L+++
Sbjct: 360 CVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
Query: 532 TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
G Y LL + Y+ +G+W+ +LR +K K + PGCS
Sbjct: 420 EAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCS 459
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 182/426 (42%), Gaps = 63/426 (14%)
Query: 18 HAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLS-HYVHPILHNLHNPDSFSWGCVI 76
H +QIHA +L L +F HH L + P +Y + NP +I
Sbjct: 26 HLRQIHALLLRTSLIRNSDVF-HHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMI 84
Query: 77 RFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISS-ALKSCARIQDKLGGVSIHGQVHVLGY 135
R FS E L+ ++R P + SS ALK C + D LGG+ IHG++ G+
Sbjct: 85 RAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGF 144
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK 195
+ + T L+DLYS + A KVFDE+ +++ VSWN L S YL+ + LFDK
Sbjct: 145 LSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDK 204
Query: 196 IP-----------------------------GKDVISW-------------NSMISGYSK 213
+ GK V + N+++S YS+
Sbjct: 205 MKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSR 264
Query: 214 AGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITM 269
G+MD+A +F M ERN+ SW +I+G +G A E F+ M K +L +
Sbjct: 265 CGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGL 324
Query: 270 IAGYSKSGDVDSAHKLFDQMD------EKDLLSYNAMIACYAQNSKPKEALELFNYMLKP 323
++ S SG V FD+M + +L Y ++ + +A Y L
Sbjct: 325 LSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKA-----YSLIK 379
Query: 324 EINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGV-VLDDHLATALVDLYAKSGSI 382
+ + PD +++ AC GD+E + SH+ + D++ L++ Y+ G
Sbjct: 380 SMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYV--LLLNTYSTVGKW 437
Query: 383 DKAYEL 388
+K EL
Sbjct: 438 EKVTEL 443
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 238/436 (54%), Gaps = 34/436 (7%)
Query: 143 TALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG 198
T+ ++L ++ G + A K F +M E N +++ +LLSG GD
Sbjct: 40 TSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG---CGDFTSGSE------- 89
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG-YIDSGSILSAREVFDA 257
+ ++ GY+ +D RN T I G Y G AR VFD
Sbjct: 90 ----ALGDLLHGYACKLGLD-----------RNHVMVGTAIIGMYSKRGRFKKARLVFDY 134
Query: 258 MPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELF 317
M +NSV+ TMI GY +SG VD+A K+FD+M E+DL+S+ AMI + + +EAL F
Sbjct: 135 MEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWF 194
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
M V PD + + + ++AC+ LG L W+ ++ + ++ +L+DLY
Sbjct: 195 REMQIS--GVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYC 252
Query: 378 KSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTG 437
+ G ++ A ++F+ + KR +V+++++I GF NG A +++ F +M + P+ VT+TG
Sbjct: 253 RCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTG 312
Query: 438 ILTAYNHAGLVEEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ 496
LTA +H GLVEEG F MK D + P ++HYG +VDL RAG L++A +L+ +MP +
Sbjct: 313 ALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Query: 497 PNADVWGALLLACRLH-NNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
PN V G+LL AC H NN+ L E ++H L + Y +LS++YA G+W+ A K+
Sbjct: 373 PNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKM 432
Query: 556 RMGVKGKNVIKTPGCS 571
R +KG + K PG S
Sbjct: 433 RRKMKGLGLKKQPGFS 448
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 170/337 (50%), Gaps = 16/337 (4%)
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI---QDKLGGVS 125
+ SW I ++ G+ EA + M G+ P + L C + LG +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL- 94
Query: 126 IHGQVHVLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
+HG LG D V V TA++ +YSK G AR VFD M +KN V+WN+++ GY+++G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYID 244
+D A +FDK+P +D+ISW +MI+G+ K G ++A F++M + I ++
Sbjct: 155 QVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 245 SGSILSA--------REVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS 296
+ + L A R V K N ++I Y + G V+ A ++F M+++ ++S
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH-WRWIES 355
+N++I +A N E+L F M E PD +T ++ACS +G +E R+ +
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKM--QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
D+ + LVDLY+++G ++ A +L +
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM 369
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 11/242 (4%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D SW +I F +KG EA+ + +MQ G+ P AI +AL +C + G+ +H
Sbjct: 170 DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVH 229
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
V + V V +L+DLY + G V AR+VF M ++ VVSWNS++ G+ G+
Sbjct: 230 RYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAH 289
Query: 188 EAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP-----ERNLASWNTM 238
E+ F K+ K D +++ ++ S G +++ FQ M + + +
Sbjct: 290 ESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCL 349
Query: 239 IAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSG-DVDSAHKLFDQMDEKDLLS 296
+ Y +G + A ++ +MP K N V + +++A S G ++ A +L + + ++ S
Sbjct: 350 VDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKS 409
Query: 297 YN 298
++
Sbjct: 410 HS 411
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 270/549 (49%), Gaps = 85/549 (15%)
Query: 109 SALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK 168
S L+ C R G +H + G + L+D+Y K + A KVFD M E+
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLFDKI------PGKDVISWN----------------- 205
NVVSW++L+SG++ GDL + LF ++ P + S N
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 206 ----------------SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSIL 249
S++ YSK G +++A +F+++ +R+L SWN MIAG++ +G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 250 SAREVFDAMPKRN------------------SVSLI------------------------ 267
A + F M + N S +I
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 268 -TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
+++ Y K G + SA K FDQ+ EK ++S++++I YAQ + EA+ LF + E+N
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL--QELN 308
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
D L+S+I + L + +++ L+ + ++VD+Y K G +D+A
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 387 ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
+ F ++ +D+++++ +I G+G +G ++++F +ML NI P+ V Y +L+A +H+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 447 LVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGAL 505
+++EG F+ + + +G+ P V+HY +VDLLGRAG L EA LI MP +PN +W L
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 506 LLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI 565
L CR+H ++ELG+ + +++++ Y ++S++Y G W++ R K +
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 566 KTPGCSWTQ 574
K G SW +
Sbjct: 549 KEAGMSWVE 557
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
+ L S++ C++ G + + ++ G L+ + L+D+Y K AY++F
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
+ +R++V++SA++ G +NG ++ LF +M + I PN T++ L A +E
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+G G +V+ +VD+ + G ++EA E + + W A++
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA-EKVFRRIVDRSLISWNAMI 180
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/582 (29%), Positives = 287/582 (49%), Gaps = 52/582 (8%)
Query: 6 LTTLMKKCST---LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
T+L+ C+ L Q H+ I+ L + LF+ + L+ D+ I
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKL--AKNLFVGNALV-DMYAKCGALEDARQIFE 487
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
+ + D+ +W +I + Q EA L+ +M G+ ++S LK+C +
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H G D ++ ++L+D+YSK
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSK------------------------------- 576
Query: 183 AGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTM 238
G + +A+ +F +P V+S N++I+GYS+ N+++A LFQ+M R + ++ T+
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATI 635
Query: 239 IAGYIDSGSILSAREVFDAMPKRNSVSL-----ITMIAGYSKSGDVDSAHKLFDQMDE-K 292
+ S+ + + KR S I+++ Y S + A LF ++ K
Sbjct: 636 VEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPK 695
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
++ + M++ ++QN +EAL+ + M V PD+ T +V+ CS L L R
Sbjct: 696 SIVLWTGMMSGHSQNGFYEEALKFYKEMRHD--GVLPDQATFVTVLRVCSVLSSLREGRA 753
Query: 353 IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR-DLVAYSAMIYGFGING 411
I S I LD+ + L+D+YAK G + + ++F +R+R ++V+++++I G+ NG
Sbjct: 754 IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHY 470
A DA+K+F+ M +I P+ +T+ G+LTA +HAG V +G F M G+ VDH
Sbjct: 814 YAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES 530
MVDLLGR G+L EA + I +P+A +W +LL ACR+H + GEI+ + I+LE
Sbjct: 874 ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEP 933
Query: 531 DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
Y LLS+IYA+ G W+ A LR ++ + V K PG SW
Sbjct: 934 QNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSW 975
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 238/527 (45%), Gaps = 62/527 (11%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D +W ++ +S G+ + + +V + + P S L +CAR + G IH
Sbjct: 124 DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIH 183
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
+ +G + Y AL+D+Y+K + AR+VF+ + + N V W L SGY+KAG +
Sbjct: 184 CSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPE 243
Query: 188 EAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI 243
EA +F+++ + D +++ ++I+ Y + G + A LF +M ++ +WN MI+G+
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHG 303
Query: 244 DSGSILSAREVFDAMPK------RNSVSLI------------------------------ 267
G A E F M K R+++ +
Sbjct: 304 KRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY 363
Query: 268 ---TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
++++ YSK +++A K+F+ ++EK+ + +NAMI YA N + + +ELF M
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
N+ D T S++S C+ DLE S I + + + ALVD+YAK G+++
Sbjct: 424 YNI--DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALED 481
Query: 385 AYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNH 444
A ++F + RD V ++ +I + + S+A LF++M I + L A H
Sbjct: 482 ARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTH 541
Query: 445 AGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP----TQPNAD 500
+ +G GL + ++D+ + G + +A ++ ++P NA
Sbjct: 542 VHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL 601
Query: 501 VWG---------ALLLACRLHNNVELGEIA----VQHCIKLESDTVG 534
+ G +L L V EI V+ C K ES T+G
Sbjct: 602 IAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/537 (21%), Positives = 225/537 (41%), Gaps = 103/537 (19%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + +PD +W +I ++G A+ + M++ + T + S L + + +
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVAN 342
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G+ +H + LG + +YV ++L+ +YSK + A KVF+ + EKN V WN+++ G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 180 YLKAGDLDEAQHLF---------------------------------------DKIPGKD 200
Y G+ + LF K K+
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 201 VISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK 260
+ N+++ Y+K G ++ A +F++M +R+ +WNT+I Y+ + E FD +
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDE---NESEAFDLFKR 519
Query: 261 RNSVSLI------------------------------------------TMIAGYSKSGD 278
N ++ ++I YSK G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 279 VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
+ A K+F + E ++S NA+IA Y+QN+ +EA+ LF ML +N P ++T A+++
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVN--PSEITFATIV 636
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLD-DHLATALVDLYAKSGSIDKAYELFHGLRK-RD 396
AC + L I G + ++L +L+ +Y S + +A LF L +
Sbjct: 637 EACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKS 696
Query: 397 LVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG----- 451
+V ++ M+ G NG +A+K +++M + + P+ T+ +L + + EG
Sbjct: 697 IVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Query: 452 --YWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+ + + + L+D Y D+ G + DE M + N W +L+
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE-------MRRRSNVVSWNSLI 806
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 195/427 (45%), Gaps = 47/427 (11%)
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G ++H + +LG D+ + A++DLY+K V A K FD + EK+V +WNS+LS Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 183 AG----------DLDEAQHLFDKIPGKDVIS------------------------WNSMI 208
G L E Q +K V+S NS
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 209 SG-----YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP---- 259
G Y+K + A +F+ + + N W + +GY+ +G A VF+ M
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 260 KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNY 319
+ + ++ +T+I Y + G + A LF +M D++++N MI+ + + A+E F
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN 317
Query: 320 MLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
M K +V + TL SV+SA + +L+ + + G+ + ++ ++LV +Y+K
Sbjct: 318 MRKS--SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 380 GSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
++ A ++F L +++ V ++AMI G+ NG + ++LF M + T+T +L
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Query: 440 TAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNA 499
+ + +E G + + L + +VD+ + G L++A ++ M + N
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV 495
Query: 500 DVWGALL 506
W ++
Sbjct: 496 -TWNTII 501
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/520 (21%), Positives = 209/520 (40%), Gaps = 117/520 (22%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+P++ W C+ + + G EAV ++ +M+ G P D L V+
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP----------------DHLAFVT 266
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
+ ++ Y ++G + AR +F EM+ +VV+WN ++SG+ K G
Sbjct: 267 V-------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC 307
Query: 186 LDEAQHLFDKIPGKDVISW---------------------------------------NS 206
A F + V S +S
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 207 MISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----- 261
++S YSK M+ A +F+ + E+N WN MI GY +G E+F M
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNID 427
Query: 262 --NSVSLITMIAG--------------------------------YSKSGDVDSAHKLFD 287
SL++ A Y+K G ++ A ++F+
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
+M ++D +++N +I Y Q+ EA +LF M + D LAS + AC+ + L
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM--NLCGIVSDGACLASTLKACTHVHGL 545
Query: 348 EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGF 407
+ + G+ D H ++L+D+Y+K G I A ++F L + +V+ +A+I G+
Sbjct: 546 YQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY 605
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV 467
N +A+ LF++ML + P+ +T+ I+ A + + G + G
Sbjct: 606 SQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEG 664
Query: 468 DHYGI-MVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
++ GI ++ + + + EA L + + + +W ++
Sbjct: 665 EYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 160/342 (46%), Gaps = 33/342 (9%)
Query: 248 ILSAREVFDAMPKRNSVSLI--------TMIAG--------------YSKSGDVDSAHKL 285
+ +R+VFD MP+R +++L ++I G Y+K V A K
Sbjct: 58 LFKSRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQ 117
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
FD + EKD+ ++N+M++ Y+ KP + L F + + +I P+K T + V+S C++
Sbjct: 118 FDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI--FPNKFTFSIVLSTCARET 174
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
++E R I + G+ + + ALVD+YAK I A +F + + V ++ +
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
G+ G +A+ +FE+M E P+ + + ++ Y G +++ F M P
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----P 290
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINM---PTQPNADVWGALLLACRLHNNVELGEIAV 522
V + +M+ G+ G A E NM + G++L A + N++LG +
Sbjct: 291 DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVH 350
Query: 523 QHCIKLE-SDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKN 563
IKL + + S L S+Y+ + + A K+ ++ KN
Sbjct: 351 AEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/432 (32%), Positives = 231/432 (53%), Gaps = 13/432 (3%)
Query: 158 ARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSK 213
A +VF + NV+ +N+++ Y G E+ F + + D ++ ++ S
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 214 AGNMDQANSLFQKMPERNLASWNTMIAG----YIDSGSILSAREVFDAMPKRNSVSLITM 269
++ + ++ + G Y G + A++VFD M +RN V M
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 270 IAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
I G+ SGDV+ LF QM E+ ++S+N+MI+ ++ + +EALELF M+ + P
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD--P 232
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD-DHLATALVDLYAKSGSIDKAYEL 388
D+ T+ +V+ + LG L+ +WI S G+ D + ALVD Y KSG ++ A +
Sbjct: 233 DEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAI 292
Query: 389 FHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE-NIGPNLVTYTGILTAYNHAGL 447
F +++R++V+++ +I G +NG+ I LF+ M+ E + PN T+ G+L ++ G
Sbjct: 293 FRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQ 352
Query: 448 VEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
VE G F M + L +HYG MVDL+ R+G + EA++ + NMP NA +WG+LL
Sbjct: 353 VERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLL 412
Query: 507 LACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIK 566
ACR H +V+L E+A +K+E G Y LLS++YA GRW D +K+R +K + K
Sbjct: 413 SACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRK 472
Query: 567 TPGCSWTQRVSL 578
+ G S VS+
Sbjct: 473 STGQSTICDVSV 484
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 218/409 (53%), Gaps = 30/409 (7%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHI-LLWDVNNYKPLSHYVHPI 60
+ KL L+ +T +IHAH+L + LH L H I + ++N S Y + +
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSN----SDYANRV 58
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
++ NP+ + +I+ +S G +E++S + M+ G+ + + LKSC+ + D
Sbjct: 59 FSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDL 118
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G +HG++ G+ ++ +++LY+ G +G A+KVFDEM+E+NVV WN ++ G+
Sbjct: 119 RFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGF 178
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWN 236
+GD++ HLF ++ + ++SWNSMIS SK G +A LF +M ++ A+
Sbjct: 179 CDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVV 238
Query: 237 TMIA-----GYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
T++ G +D+G + + + K ++ Y KSGD+++A +F +M
Sbjct: 239 TVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQR 298
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
++++S+N +I+ A N K + ++LF+ M++ E V P++ T V++ CS G +E
Sbjct: 299 RNVVSWNTLISGSAVNGKGEFGIDLFDAMIE-EGKVAPNEATFLGVLACCSYTGQVERGE 357
Query: 352 WIESHINDFGVVLD--------DHLATALVDLYAKSGSIDKAYELFHGL 392
+ FG++++ +H A+VDL ++SG I +A++ +
Sbjct: 358 EL------FGLMMERFKLEARTEHYG-AMVDLMSRSGRITEAFKFLKNM 399
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 222/412 (53%), Gaps = 44/412 (10%)
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----- 259
+ ++ Y + G+ A LF +MPER+L SWN++I+GY G + EV M
Sbjct: 70 DQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVG 129
Query: 260 -KRNSVSLITMIAG-----------------------------------YSKSGDVDSAH 283
+ N V+ ++MI+ Y K+GD+ S+
Sbjct: 130 FRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSC 189
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
KLF+ + K+L+S+N MI + QN ++ L FN + + PD+ T +V+ +C
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN--MSRRVGHEPDQATFLAVLRSCED 247
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
+G + + I I G + + TAL+DLY+K G ++ + +FH + D +A++AM
Sbjct: 248 MGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAM 307
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNG 462
+ + +G DAIK FE M+ I P+ VT+T +L A +H+GLVEEG F +M K
Sbjct: 308 LAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYR 367
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV 522
+ P +DHY MVDLLGR+G L +AY LI MP +P++ VWGALL ACR++ + +LG A
Sbjct: 368 IDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAA 427
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+ +LE Y +LS+IY+ G W DA ++R +K K +++ GCS+ +
Sbjct: 428 ERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 183/462 (39%), Gaps = 79/462 (17%)
Query: 4 TKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWD--VNNYKPLSHYV--HP 59
+ L +K C ++ + +H ++ + + H + D V Y L H V
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVV-------KSVSYRHGFIGDQLVGCYLRLGHDVCAEK 87
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM--QRMGLCPTSHAISSALKSCARI 117
+ + D SW +I +S +G + + +M +G P S + +C
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
K G IHG V G V V A ++ Y K GD+ ++ K+F++++ KN+VSWN+++
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 178 SGYLKAG-----------------DLDEAQHL-----------------------FDKIP 197
+L+ G + D+A L F
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 198 GKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDA 257
G I+ +++ YSK G ++ ++++F ++ + +W M+A Y G A + F+
Sbjct: 268 GNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 258 MP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK-----DLLSYNAMIACYAQNS 308
M + V+ ++ S SG V+ F+ M ++ L Y+ M+ ++
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISAC-----SQLGDLEHWRWIESHINDFGVV 363
++A Y L E+ + P +++ AC +QLG R E
Sbjct: 387 LLQDA-----YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPR----- 436
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
D L ++Y+ SG A + + ++++ LV S Y
Sbjct: 437 -DGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSY 477
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 230/415 (55%), Gaps = 14/415 (3%)
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPE-RNL 232
N L+ Y+K +++ A+ LFD++ +V+SW S+ISGY+ G A S+FQKM E R +
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPV 127
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMP--------KRNSVSLITMIAGYSKSGDVDSAHK 284
A + S L+ + + +RN V +++ Y K DV++A +
Sbjct: 128 PPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARR 187
Query: 285 LFDQMDE--KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
+FD M ++++S+ +MI YAQN++ EA+ELF + ++ LASVISACS
Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACS 247
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
LG L+ + + G + +AT+L+D+YAK GS+ A ++F +R +++Y++
Sbjct: 248 SLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTS 307
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN- 461
MI +G A+KLF++M+ I PN VT G+L A +H+GLV EG + M +
Sbjct: 308 MIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKY 367
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAYEL--IINMPTQPNADVWGALLLACRLHNNVELGE 519
G+VP HY +VD+LGR G +DEAYEL I + + A +WGALL A RLH VE+
Sbjct: 368 GVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVS 427
Query: 520 IAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
A + I+ Y LS+ YA G W+D++ LR+ +K +K CSW +
Sbjct: 428 EASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 172/356 (48%), Gaps = 34/356 (9%)
Query: 37 LFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM- 95
L I ++ L ++N + L + P+ SW VI ++ G+ A+S++ +M
Sbjct: 70 LVISYVKLKEINTARKL-------FDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 96 QRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDV 155
+ + P + +S K+C+ + + G +IH ++ + G + V ++L+D+Y K DV
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 156 GTARKVFDEMA--EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSK 213
TAR+VFD M +NVVSW S+++ Y + EA LF S+N+ ++ S
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR--------SFNAALT--SD 232
Query: 214 AGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGY 273
N S+ W + G + G S N+V +++ Y
Sbjct: 233 RANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES-----------NTVVATSLLDMY 281
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
+K G + A K+F ++ ++SY +MI A++ + A++LF+ M+ IN P+ +T
Sbjct: 282 AKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRIN--PNYVT 339
Query: 334 LASVISACSQLGDL-EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
L V+ ACS G + E ++ +GVV D T +VD+ + G +D+AYEL
Sbjct: 340 LLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYEL 395
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/568 (28%), Positives = 281/568 (49%), Gaps = 59/568 (10%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + + ++ +W ++ + Q G+ EA+ L+ M++ G+ PT +S+ L + A
Sbjct: 230 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA---- 285
Query: 120 KLGGVSIHGQVHVL----GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
+GGV Q H + G + + T+LL+ Y K+G + A VFD M EK+VV+WN
Sbjct: 286 NMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 176 LLSGYLKAGDLDEAQHL----------FDKIP----------------GK---------- 199
++SGY++ G +++A ++ +D + GK
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 200 ---DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFD 256
D++ ++++ Y+K G++ A +F E++L WNT++A Y +SG A +F
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 257 AMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNS 308
M N ++ +I ++G VD A +F QM +L+S+ M+ QN
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNG 525
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI-NDFGVVLDDH 367
+EA+ M E + P+ ++ +SAC+ L L R I +I +
Sbjct: 526 CSEEAILFLRKM--QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN 427
+ T+LVD+YAK G I+KA ++F +L +AMI + + G +AI L+ + G
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 428 IGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEA 486
+ P+ +T T +L+A NHAG + + F + + P ++HYG+MVDLL AG ++A
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKA 703
Query: 487 YELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANL 546
LI MP +P+A + +L+ +C EL + + ++ E + G Y +S+ YA
Sbjct: 704 LRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVE 763
Query: 547 GRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G WD+ K+R +K K + K PGCSW Q
Sbjct: 764 GSWDEVVKMREMMKAKGLKKKPGCSWIQ 791
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/554 (24%), Positives = 261/554 (47%), Gaps = 49/554 (8%)
Query: 16 LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCV 75
L+ KQIHA IL NG + +I L+ L + L + FSW +
Sbjct: 86 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDAL-EIAEVLFSKLRVRNVFSWAAI 144
Query: 76 IRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY 135
I + G A+ +V+M + P + + + K+C ++ G +HG V G
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK 195
+ CV+V ++L D+Y K G LD+A +FD+
Sbjct: 205 EDCVFVASSLADMYGK-------------------------------CGVLDDASKVFDE 233
Query: 196 IPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA---------GYIDSG 246
IP ++ ++WN+++ GY + G ++A LF M ++ + ++ G ++ G
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Query: 247 SILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ 306
A + + M N + +++ Y K G ++ A +FD+M EKD++++N +I+ Y Q
Sbjct: 294 KQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 352
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
++A+ + M ++ D +TLA+++SA ++ +L+ + ++ + D
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKY--DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE 426
LA+ ++D+YAK GSI A ++F ++DL+ ++ ++ + +G + +A++LF M E
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLE 470
Query: 427 NIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA 486
+ PN++T+ I+ + G V+E F M+ +G++P + + M++ + + G +EA
Sbjct: 471 GVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEA 530
Query: 487 YELIINMPT---QPNADVWGALLLACRLHNNVELGEIAVQHCIK--LESDTVGYYSLLSS 541
+ M +PNA L AC ++ +G + I+ S V + L
Sbjct: 531 ILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVD 590
Query: 542 IYANLGRWDDAKKL 555
+YA G + A+K+
Sbjct: 591 MYAKCGDINKAEKV 604
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 7/216 (3%)
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
SY ++ +N + KEAL L M + + P+ ++ C DL + I +
Sbjct: 37 SYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPE--IYGEILQGCVYERDLSTGKQIHA 94
Query: 356 HI---NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGR 412
I DF ++++ T LV YAK +++ A LF LR R++ +++A+I G
Sbjct: 95 RILKNGDF-YARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGI 472
A+ F +ML I P+ + A G + +GL V
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
+ D+ G+ G LD+A ++ +P + NA W AL++
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDR-NAVAWNALMVG 248
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/583 (29%), Positives = 298/583 (51%), Gaps = 64/583 (10%)
Query: 6 LTTLMKKC---STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
+T+++ C S + A Q+HA + +G + + I ++ + LS V L
Sbjct: 354 VTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLD 413
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
++ + + +I FSQ + +A+ L+ +M + GL ++ S L L
Sbjct: 414 DIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV-------LD 464
Query: 123 GVSIHGQVHVLGYDTCVYVQTAL-LDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
+++ QVH GY +++ L LDL VG+ SL + Y
Sbjct: 465 CLNLGKQVH--GYT----LKSGLVLDL-----TVGS-----------------SLFTLYS 496
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG 241
K G L+E+ LF IP KD W SMISG+++ G + +A LF +M + + + +A
Sbjct: 497 KCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLA- 555
Query: 242 YIDSGSILSAREVFDAMPKRNSVSLITMIAG--------------YSKSGDVDSAHKLFD 287
++L+ ++P+ + T+ AG YSK G + A +++D
Sbjct: 556 -----AVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
++ E D +S +++I+ Y+Q+ ++ LF M+ + D ++S++ A + +
Sbjct: 611 RLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM--DSFAISSILKAAALSDES 668
Query: 348 EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGF 407
+ ++I G+ + + ++L+ +Y+K GSID + F + DL+A++A+I +
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASY 728
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPL 466
+G+A++A++++ M + P+ VT+ G+L+A +H GLVEE Y+ NSM KD G+ P
Sbjct: 729 AQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPE 788
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCI 526
HY MVD LGR+G L EA I NM +P+A VWG LL AC++H VELG++A + I
Sbjct: 789 NRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAI 848
Query: 527 KLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
+LE G Y LS+I A +G WD+ ++ R +KG V K PG
Sbjct: 849 ELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/559 (23%), Positives = 239/559 (42%), Gaps = 89/559 (15%)
Query: 16 LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCV 75
L K + AH+L L + +L W N+ + + PD S +
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMAD--AAKLFDTIPQPDVVSCNIM 121
Query: 76 IRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY 135
I + Q F E++ + +M +G + S + +C+ +Q L + +GY
Sbjct: 122 ISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGY 181
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFD- 194
V++AL+D++SK A KVF + NV WN++++G L+ + LF
Sbjct: 182 FFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHE 241
Query: 195 -------------------------------------KIPGKDVISWNSMISGYSKAGNM 217
K +DV +++ Y+K G+M
Sbjct: 242 MCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHM 301
Query: 218 DQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAG- 272
+A +F ++P ++ SW M++GY S SA E+F M + N+ ++ ++I+
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 273 ----------------------------------YSKSGDVDSAHKLFDQMDEKDLLS-Y 297
YSKSGD+D + ++F+ +D+ +
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV 421
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA--CSQLGDLEHWRWIES 355
N MI ++Q+ KP +A+ LF ML+ + D+ ++ S++S C LG H ++S
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQE--GLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKS 479
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
G+VLD + ++L LY+K GS++++Y+LF G+ +D +++MI GF G +
Sbjct: 480 -----GLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLRE 534
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD 475
AI LF +ML + P+ T +LT + + G G+ +D +V+
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVN 594
Query: 476 LLGRAGWLDEAYELIINMP 494
+ + G L A ++ +P
Sbjct: 595 MYSKCGSLKLARQVYDRLP 613
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 165/589 (28%), Positives = 287/589 (48%), Gaps = 57/589 (9%)
Query: 2 VATKLTTLMKKCSTLNH--AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHP 59
VAT + TL + ++ +QIH ++ G P + VN Y
Sbjct: 60 VATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSL----VNMYAKCGLMRRA 115
Query: 60 IL-HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQ 118
+L D F + +I F G ++A+ Y +M+ G+ P + S LK ++
Sbjct: 116 VLVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME 175
Query: 119 DKLGGVS-IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
L V +HG LG+D+ YV + L+ YSK V
Sbjct: 176 --LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSV---------------------- 211
Query: 178 SGYLKAGDLDEAQHLFDKIPGKD-VISWNSMISGYSKAGNMDQANSLFQKMPERNLA--- 233
++AQ +FD++P +D + WN++++GYS+ + A +F KM E +
Sbjct: 212 ---------EDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSR 262
Query: 234 -SWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLIT----MIAGYSKSGDVDSAHKLFDQ 288
+ ++++ + SG I + R + K S S I +I Y KS ++ A+ +F+
Sbjct: 263 HTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEA 322
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
MDE+DL ++N+++ + L LF ML + PD +TL +V+ C +L L
Sbjct: 323 MDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS--GIRPDIVTLTTVLPTCGRLASLR 380
Query: 349 HWRWIESHINDFGVV----LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
R I ++ G++ ++ + +L+D+Y K G + A +F +R +D +++ MI
Sbjct: 381 QGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMI 440
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGL 463
G+G+ A+ +F M + P+ +T+ G+L A +H+G + EG M+ +
Sbjct: 441 NGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNI 500
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
+P DHY ++D+LGRA L+EAYEL I+ P N VW ++L +CRLH N +L +A +
Sbjct: 501 LPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGK 560
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+LE + G Y L+S++Y G++++ +R ++ +NV KTPGCSW
Sbjct: 561 RLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSW 609
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 309 KPKEALELFNYMLKPEINVHPDK------MTLASVISACSQLGDLEHWRWIESHINDFGV 362
KP AL + +I +P + T + + C+Q D + I + G
Sbjct: 32 KPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGF 91
Query: 363 VLDDHLA-TALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFE 421
+ D A T+LV++YAK G + +A +F G +RD+ Y+A+I GF +NG DA++ +
Sbjct: 92 LDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYR 150
Query: 422 QMLGENIGPNLVTYTGIL 439
+M I P+ T+ +L
Sbjct: 151 EMRANGILPDKYTFPSLL 168
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 251/447 (56%), Gaps = 27/447 (6%)
Query: 145 LLDLYSKMGDVGTAR----KVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKD 200
+L L ++ G V A+ K+ E +V N L++ Y K G ++ A+ +FD + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 201 VISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREV-FDAM- 258
++SWN+MI Y++ +A +F +M I+ S+LSA V DA+
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTIS------SVLSACGVNCDALE 180
Query: 259 -PKRNSVSLITMI-----AG------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ 306
K + +S+ T I G Y+K G + A ++F+ M +K +++++M+A Y Q
Sbjct: 181 CKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ 240
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
N +EAL L Y +++ ++ TL+SVI ACS L L + + + I G +
Sbjct: 241 NKNYEEALLL--YRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE 426
+A++ VD+YAK GS+ ++Y +F +++++L ++ +I GF + R + + LFE+M +
Sbjct: 299 FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 427 NIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDE 485
+ PN VT++ +L+ H GLVEEG F M+ GL P V HY MVD+LGRAG L E
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 486 AYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYAN 545
AYELI ++P P A +WG+LL +CR++ N+EL E+A + +LE + G + LLS+IYA
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Query: 546 LGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+W++ K R ++ +V K G SW
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSW 505
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 163/361 (45%), Gaps = 81/361 (22%)
Query: 111 LKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV 170
L+ CAR + + HG++ + + V + L++ YSK G V AR+VFD M E+++
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 171 VSWNSLLSGYLKAGDLDEAQHLFDKIPG-------------------------------- 198
VSWN+++ Y + EA +F ++
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 199 --KDVISWN-----SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG----S 247
K I N +++ Y+K G + A +F+ M +++ +W++M+AGY+ + +
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA 247
Query: 248 ILSAREVFDAMPKRNSVSLITMIAG----------------------------------- 272
+L R ++N +L ++I
Sbjct: 248 LLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDM 307
Query: 273 YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
Y+K G + ++ +F ++ EK+L +N +I+ +A++++PKE + LF M + +HP+++
Sbjct: 308 YAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD--GMHPNEV 365
Query: 333 TLASVISACSQLGDLEH-WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
T +S++S C G +E R+ + +G+ + + +VD+ ++G + +AYEL
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 392 L 392
+
Sbjct: 426 I 426
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 61/330 (18%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQV 130
SW +I +++ EA+ ++++M+ G + ISS L +C D L ++
Sbjct: 129 SWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC----KKL 184
Query: 131 HVLGYDTCV----YVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
H L TC+ YV TALLDLY+K G + A +VF+ M +K+ V+W+S+++GY++ +
Sbjct: 185 HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 187 DEAQHLFDK--------------------------IPGK-------------DVISWNSM 207
+EA L+ + I GK +V +S
Sbjct: 245 EEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA 304
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----NS 263
+ Y+K G++ ++ +F ++ E+NL WNT+I+G+ +F+ M + N
Sbjct: 305 VDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNE 364
Query: 264 VSLITMIAGYSKSGDVDSAHKLFDQMD-----EKDLLSYNAMIACYAQNSKPKEALELFN 318
V+ ++++ +G V+ + F M +++ Y+ M+ + EA EL
Sbjct: 365 VTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 319 YMLKPEINVHPDKMTLASVISACSQLGDLE 348
I P S++++C +LE
Sbjct: 425 -----SIPFDPTASIWGSLLASCRVYKNLE 449
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 106/209 (50%), Gaps = 9/209 (4%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ ++ + S +W ++ + Q + EA+ LY + QRM L +SS + +C+ +
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
+ G +H + G+ + V+V ++ +D+Y+K G + + +F E+ EKN+ WN+++SG
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 180 YLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPER----- 230
+ K E LF+K+ + ++++S++S G +++ F+ M
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 231 NLASWNTMIAGYIDSGSILSAREVFDAMP 259
N+ ++ M+ +G + A E+ ++P
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIP 427
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 279/593 (47%), Gaps = 83/593 (13%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRM--GLCPTSHAISSALKSCA 115
+ + + D SW +I+ + EA+ L+ M+ + + P + +S LK+C
Sbjct: 60 RQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG 119
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
+ + G S+H + VYV ++LLD+Y ++G + + +VF EM +N V+W +
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTA 179
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVIS-------------------------------- 203
+++G + AG E F ++ + +S
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 204 -------WNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFD 256
NS+ + Y++ G M LF+ M ER++ SW ++I Y G + A E F
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 257 AM------PKRNSVSLI---------------------------------TMIAGYSKSG 277
M P + + + +M+ YS G
Sbjct: 300 KMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCG 359
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
++ SA LF M +D++S++ +I Y Q +E + F++M + P LAS+
Sbjct: 360 NLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS--GTKPTDFALASL 417
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
+S + +E R + + FG+ + + ++L+++Y+K GSI +A +F + D+
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDI 477
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
V+ +AMI G+ +G++ +AI LFE+ L P+ VT+ +LTA H+G ++ G+ FN
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537
Query: 458 MKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVE 516
M++ + P +HYG MVDLL RAG L +A ++I M + + VW LL+AC+ ++E
Sbjct: 538 MQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIE 597
Query: 517 LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
G A + ++L+ L++IY++ G ++A +R +K K VIK PG
Sbjct: 598 RGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/547 (24%), Positives = 238/547 (43%), Gaps = 99/547 (18%)
Query: 6 LTTLMKKC---STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHP--I 60
L+ ++K C S + + + +HA+ + L L +++ LL + YK + +
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSL--LSSVYVGSSLL---DMYKRVGKIDKSCRV 165
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ ++ +W +I G++ E ++ + +M R ++ + ALK+CA ++
Sbjct: 166 FSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQV 225
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G +IH V V G+ T + V +L +Y++ G++ +F+ M+E++VVSW SL+ Y
Sbjct: 226 KYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAY 285
Query: 181 LKAGDLDEAQHLFDKIPGKDV-------------------ISW----------------- 204
+ G +A F K+ V + W
Sbjct: 286 KRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSL 345
Query: 205 ---NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG--------------- 246
NSM+ YS GN+ A+ LFQ M R++ SW+T+I GY +G
Sbjct: 346 SVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQS 405
Query: 247 ----------SILS----------AREVFDAMP-----KRNSVSLITMIAGYSKSGDVDS 281
S+LS R+V A+ ++NS ++I YSK G +
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSIKE 464
Query: 282 AHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
A +F + D D++S AMI YA++ K KEA++LF LK + PD +T SV++AC
Sbjct: 465 ASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK--VGFRPDSVTFISVLTAC 522
Query: 342 SQLGDLE-HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVA 399
+ G L+ + + + + +VDL ++G + A ++ + + K+D V
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 400 YSAMIYGFGINGRASDAIKLFEQM--LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
++ ++ G + E++ L LVT I Y+ G +EE +
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANI---YSSTGNLEEAANVRKN 639
Query: 458 MKDNGLV 464
MK G++
Sbjct: 640 MKAKGVI 646
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 209/526 (39%), Gaps = 132/526 (25%)
Query: 153 GDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI--------PGKDVIS- 203
G++ AR+VFD+M ++VSW S++ Y+ A + DEA LF + P V+S
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 204 --------------------------------WNSMISGYSKAGNMDQANSLFQKMPERN 231
+S++ Y + G +D++ +F +MP RN
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 232 LASWNTMIAGYIDSGSILSAREVFDAMPKRNSVS-------LITMIAG------------ 272
+W +I G + +G F M + +S + AG
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 273 --------------------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKE 312
Y++ G++ LF+ M E+D++S+ ++I Y + + +
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 313 ALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES-HINDFGVVLDDHLAT- 370
A+E F M + V P++ T AS+ SAC+ L L W E H N + L+D L+
Sbjct: 294 AVETFIKMRNSQ--VPPNEQTFASMFSACASLSRLV---WGEQLHCNVLSLGLNDSLSVS 348
Query: 371 -ALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG 429
+++ +Y+ G++ A LF G+R RD++++S +I G+ G + K F M
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 430 PNLVTYTGILTAYNHAGLVEEGY------WCF----NSMKDNGLVPLVDHYG-------- 471
P +L+ + ++E G CF NS + L+ + G
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMI 468
Query: 472 -------------IMVDLLGRAGWLDEAYELI---INMPTQPNADVWGALLLACRLHNNV 515
M++ G EA +L + + +P++ + ++L AC +
Sbjct: 469 FGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQL 528
Query: 516 ELGEIAVQHCIKLESDTVG------YYSLLSSIYANLGRWDDAKKL 555
+LG H + +T +Y + + GR DA+K+
Sbjct: 529 DLG----FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKM 570
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 18/281 (6%)
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM------ 227
NS L + AG+L A+ +FDK+P D++SW S+I Y A N D+A LF M
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 228 --PERNLASWNTMIAGY---IDSGSILSAREVFDAMPKRNSV--SLITMIAGYSKSGDVD 280
P+ ++ S G I G L A V ++ V SL+ M Y + G +D
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM---YKRVGKID 160
Query: 281 SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA 340
+ ++F +M ++ +++ A+I + KE L F+ M + E D T A + A
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSE--ELSDTYTFAIALKA 218
Query: 341 CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAY 400
C+ L +++ + I +H+ G V +A +L +Y + G + LF + +RD+V++
Sbjct: 219 CAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSW 278
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
+++I + G+ A++ F +M + PN T+ + +A
Sbjct: 279 TSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSA 319
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 143/331 (43%), Gaps = 47/331 (14%)
Query: 276 SGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
+G++ +A ++FD+M D++S+ ++I Y + EAL LF+ M + V PD L+
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
V+ AC Q ++ + + ++ ++ ++ ++L+D+Y + G IDK+ +F + R
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR 172
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQM---------------LGENIGPNLVTY----- 435
+ V ++A+I G GR + + F +M L G V Y
Sbjct: 173 NAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 436 ---------------TGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRA 480
+ T Y G +++G F +M + +V + ++ R
Sbjct: 233 THVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS----WTSLIVAYKRI 288
Query: 481 GWLDEAYELIINMPTQ---PNADVWGALLLACRLHNNVELGEIAVQHCIKLE---SDTVG 534
G +A E I M PN + ++ AC + + GE HC L +D++
Sbjct: 289 GQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGE--QLHCNVLSLGLNDSLS 346
Query: 535 YYSLLSSIYANLGRWDDAKKLRMGVKGKNVI 565
+ + +Y+ G A L G++ +++I
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 189/647 (29%), Positives = 308/647 (47%), Gaps = 102/647 (15%)
Query: 20 KQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSW-GCVIRF 78
+QI I +GL L LF+ L+ LS Y + + + ++ + G ++
Sbjct: 228 EQIMCTIQKSGL--LTDLFVGSGLVSAFAKSGSLS-YARKVFNQMETRNAVTLNGLMVGL 284
Query: 79 FSQK-GQFIEAVSLYVQMQRM-GLCPTSHAISSALKSCARIQDKLG---GVSIHGQVHVL 133
QK G+ EA L++ M M + P S+ I + + +++G G +HG V
Sbjct: 285 VRQKWGE--EATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITT 342
Query: 134 G-YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHL 192
G D V + L+++Y+K G + AR+VF M +K+ VSWNS+++G + G EA
Sbjct: 343 GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVER 402
Query: 193 F------DKIPGK---------------------------------DVISWNSMISGYSK 213
+ D +PG +V N++++ Y++
Sbjct: 403 YKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 462
Query: 214 AGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREV--FDAMPKRNSVSLIT--- 268
G +++ +F MPE + SWN++I S L V +A ++ IT
Sbjct: 463 TGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSS 522
Query: 269 -----------------------------------MIAGYSKSGDVDSAHKLFDQMDEK- 292
+IA Y K G++D K+F +M E+
Sbjct: 523 VLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERR 582
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
D +++N+MI+ Y N +AL+L +ML + D A+V+SA + + LE R
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFML--QTGQRLDSFMYATVLSAFASVATLE--RG 638
Query: 353 IESHINDFGVVLDDHL--ATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
+E H L+ + +ALVD+Y+K G +D A F+ + R+ ++++MI G+ +
Sbjct: 639 MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARH 698
Query: 411 GRASDAIKLFEQM-LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVD 468
G+ +A+KLFE M L P+ VT+ G+L+A +HAGL+EEG+ F SM D+ GL P ++
Sbjct: 699 GQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIE 758
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHN--NVELGEIAVQHCI 526
H+ M D+LGRAG LD+ + I MP +PN +W +L AC N ELG+ A +
Sbjct: 759 HFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF 818
Query: 527 KLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
+LE + Y LL ++YA GRW+D K R +K +V K G SW
Sbjct: 819 QLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 228/530 (43%), Gaps = 90/530 (16%)
Query: 16 LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYV--HPILHNLHNPDSFSWG 73
L +++H H++ GL F+ I VN Y + + + + DS SW
Sbjct: 329 LKKGREVHGHVITTGLVD----FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWN 384
Query: 74 CVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL 133
+I Q G FIEAV Y M+R + P S + S+L SCA ++ G IHG+ L
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA-GDLDEAQHL 192
G D V V AL+ LY++ G + RK+F M E + VSWNS++ ++ L EA
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 193 F----------DKIP----------------GKDV-------------ISWNSMISGYSK 213
F ++I GK + + N++I+ Y K
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK 564
Query: 214 AGNMDQANSLFQKMPE-RNLASWNTMIAGYI----------------------DS---GS 247
G MD +F +M E R+ +WN+MI+GYI DS +
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 248 ILSAREVFDAMPKRNSVSLITMIAG--------------YSKSGDVDSAHKLFDQMDEKD 293
+LSA + + V ++ A YSK G +D A + F+ M ++
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH-WRW 352
S+N+MI+ YA++ + +EAL+LF M K + PD +T V+SACS G LE ++
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETM-KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 353 IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI--N 410
ES + +G+ + + D+ ++G +DK + + + V + G N
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
GR ++ K +ML + N V Y + Y G E+ MKD
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKD 853
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 50/455 (10%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK--LGGVSIHG 128
SW C++ +S+ G+ EA+ M + G+ +A S L++C I L G IHG
Sbjct: 69 SWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHG 128
Query: 129 QVHVLGYDTCVYVQTALLDLYSK-MGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
+ L Y V L+ +Y K +G VG A F ++ KN VSWNS++S Y +AGD
Sbjct: 129 LMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR 188
Query: 188 EAQHLFDKI----PGKDVISWNSMISGYSKAGN-----MDQANSLFQKMP-ERNLASWNT 237
A +F + ++ S+++ ++Q QK +L +
Sbjct: 189 SAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG 248
Query: 238 MIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
+++ + SGS+ AR+VF+ M RN+V+L ++ G + + A KLF M
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-------- 300
Query: 298 NAMIACYAQNSKPKEALELFN----YMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
N+MI + P+ + L + Y L E+ + + H I
Sbjct: 301 NSMI-----DVSPESYVILLSSFPEYSLAEEVGLKKGREV---------------HGHVI 340
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
+ + DF V + LV++YAK GSI A +F+ + +D V++++MI G NG
Sbjct: 341 TTGLVDFMV----GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF 396
Query: 414 SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIM 473
+A++ ++ M +I P T L++ + G G+ V +
Sbjct: 397 IEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456
Query: 474 VDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
+ L G+L+E ++ +MP W +++ A
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVS-WNSIIGA 490
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 209/449 (46%), Gaps = 27/449 (6%)
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-CARIQDKL 121
++ +S SW +I +SQ G A ++ MQ G PT + S + + C+ + +
Sbjct: 165 DIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDV 224
Query: 122 GGVS-IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
+ I + G T ++V + L+ ++K G + ARKVF++M +N V+ N L+ G
Sbjct: 225 RLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGL 284
Query: 181 LKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA 240
++ +EA LF + NSMI ++ + L PE +LA +
Sbjct: 285 VRQKWGEEATKLF--------MDMNSMIDVSPESYVI-----LLSSFPEYSLAEEVGLKK 331
Query: 241 GYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAM 300
G G +++ V D M + L+ M A K G + A ++F M +KD +S+N+M
Sbjct: 332 GREVHGHVITTGLV-DFMVGIGN-GLVNMYA---KCGSIADARRVFYFMTDKDSVSWNSM 386
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
I QN EA+E + M + +I P TL S +S+C+ L + + I
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDI--LPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA-SDAIKL 419
G+ L+ ++ AL+ LYA++G +++ ++F + + D V+++++I + R+ +A+
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 420 F--EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLL 477
F Q G+ + N +T++ +L+A + E G N + ++
Sbjct: 505 FLNAQRAGQKL--NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACY 562
Query: 478 GRAGWLDEAYELIINMPTQPNADVWGALL 506
G+ G +D ++ M + + W +++
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/517 (31%), Positives = 256/517 (49%), Gaps = 31/517 (5%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ H + P+ SW C+I F KG A+ V+MQR GL A+ LK+C+
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDE---MAEKNVVSWNSL 176
G +H V G ++ + +AL+D+YS G + A VF + +V WNS+
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
LSG+L + + A L +I D+ + +SG K + N
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKI----------------CINYVN 357
Query: 237 TMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS 296
+ + S ++S E+ D + V L ++ G++ AHKLF ++ KD+++
Sbjct: 358 LRLGLQVHSLVVVSGYEL-DYIVGSILVDL------HANVGNIQDAHKLFHRLPNKDIIA 410
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESH 356
++ +I ++ A LF ++K + + D+ +++++ CS L L + I
Sbjct: 411 FSGLIRGCVKSGFNSLAFYLFRELIK--LGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 357 INDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDA 416
G + ATALVD+Y K G ID LF G+ +RD+V+++ +I GFG NGR +A
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEA 528
Query: 417 IKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVD 475
+ F +M+ I PN VT+ G+L+A H+GL+EE +MK GL P ++HY +VD
Sbjct: 529 FRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVD 588
Query: 476 LLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGY 535
LLG+AG EA ELI MP +P+ +W +LL AC H N L + + +K D
Sbjct: 589 LLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSV 648
Query: 536 YSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
Y+ LS+ YA LG WD K+R K K K G SW
Sbjct: 649 YTSLSNAYATLGMWDQLSKVREAAK-KLGAKESGMSW 684
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 131/548 (23%), Positives = 245/548 (44%), Gaps = 58/548 (10%)
Query: 12 KCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFS 71
K + I AH++ G+ + +FI + ++ +++ LS H + + + +
Sbjct: 17 KVQAFKRGESIQAHVIKQGIS--QNVFIANNVISMYVDFRLLSD-AHKVFDEMSERNIVT 73
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQV 130
W ++ ++ G+ +A+ LY +M S+ LK+C + D G+ ++ ++
Sbjct: 74 WTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
Query: 131 HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQ 190
V + +++D+Y K G + A F E+ + SWN+L+SGY KAG +DEA
Sbjct: 134 GKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAV 193
Query: 191 HLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGY--IDSGSI 248
LF ++P +V+SWN +ISG+ G+ L + E + + G G +
Sbjct: 194 TLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 249 LSARE-----VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD---EKDLLSYNAM 300
L+ + V + + + ++ +I YS G + A +F Q + +N+M
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
++ + N + + AL L + + ++ D TL+ + C +L + S +
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCF--DSYTLSGALKICINYVNLRLGLQVHSLVVVS 371
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
G LD + + LVDL+A G+I A++LFH L +D++A+S +I G +G S A LF
Sbjct: 372 GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLF 431
Query: 421 EQMLG------ENIGPNL-----------------------------VTYTGILTAYNHA 445
+++ + I N+ VT T ++ Y
Sbjct: 432 RELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKC 491
Query: 446 GLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYEL---IINMPTQPNADVW 502
G ++ G F+ M + +V GI+V G+ G ++EA+ +IN+ +PN +
Sbjct: 492 GEIDNGVVLFDGMLERDVVSWT---GIIVG-FGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Query: 503 GALLLACR 510
LL ACR
Sbjct: 548 LGLLSACR 555
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 174/345 (50%), Gaps = 15/345 (4%)
Query: 107 ISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA 166
I++ L+ C ++Q G SI V G V++ ++ +Y + A KVFDEM+
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 167 EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNS-MISGYSKA----GNMDQAN 221
E+N+V+W +++SGY G ++A L+ ++ + + N M S KA G++
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 222 SLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
+++++ + NL N+++ Y+ +G ++ A F + + +S S T+I+GY K+G
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
+D A LF +M + +++S+N +I+ + P+ ALE M + + + D L
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVL--DGFALPCG 244
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR---K 394
+ ACS G L + + + G+ +AL+D+Y+ GS+ A ++FH +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
+ +++M+ GF IN A+ L Q+ ++ + T +G L
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGAL 349
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 181/663 (27%), Positives = 314/663 (47%), Gaps = 98/663 (14%)
Query: 2 VATKLTTLMKKC---STLNHAKQIHAHILINGL-HHLEPLFIHHILLWDVNNYKPLSHYV 57
+A+ + L +KC + L A+QIHA +L G E + ++ L+ L
Sbjct: 93 IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQ-A 151
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIE-AVSLYVQMQRMGLCPTSHAISSALKSCAR 116
+ + + + S+ + +S+ F A L M + P S +S ++ CA
Sbjct: 152 RKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAV 211
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
++D L G S++ Q+ LGY V VQT++L +YS GD+ +AR++FD + ++ V+WN++
Sbjct: 212 LEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTM 271
Query: 177 LSGYLKAGDLDEAQHLFDK--IPGKDVISW------------------------------ 204
+ G LK +++ F + G D +
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS 331
Query: 205 -------NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG----SILSARE 253
N+++ Y G+M +A +F ++ NL SWN++I+G ++G ++L R
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRR 391
Query: 254 VF------------------DAMPKR-----------------NSVSL-ITMIAGYSKSG 277
+ A P+R SV + T+++ Y K+
Sbjct: 392 LLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNR 451
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
+ +SA K+FD M E+D++ + MI +++ + A++ F M + E N D +L+SV
Sbjct: 452 EAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR-EKN-RSDGFSLSSV 509
Query: 338 ISACSQL-----GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
I ACS + G++ H I + F V+ + ALVD+Y K+G + A +F
Sbjct: 510 IGACSDMAMLRQGEVFHCLAIRT---GFDCVMS--VCGALVDMYGKNGKYETAETIFSLA 564
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
DL +++M+ + +G A+ FEQ+L P+ VTY +L A +H G +G
Sbjct: 565 SNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGK 624
Query: 453 WCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN-ADVWGALLLACRL 511
+ +N MK+ G+ HY MV+L+ +AG +DEA ELI P N A++W LL AC
Sbjct: 625 FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVN 684
Query: 512 HNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
N+++G A + +KL+ + + LLS++YA GRW+D ++R ++G K PG S
Sbjct: 685 TRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLS 744
Query: 572 WTQ 574
W +
Sbjct: 745 WIE 747
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 178/395 (45%), Gaps = 33/395 (8%)
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWN--SMISGYSKAGNMDQANSL----FQK- 226
N+L+S Y++ L++A+ +FDK+P +++++ S + Y G+ + + FQ
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 227 --MPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLIT--------MIAGYSKS 276
MP +AS + S ++L A+ T +I+ Y +
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 277 GDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSK-PKEALELFNYMLKPEINVHPDKMTLA 335
G ++ A K+FD+M ++++SYNA+ + Y++N A L +M V P+ T
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEY--VKPNSSTFT 203
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
S++ C+ L D+ + S I G + + T+++ +Y+ G ++ A +F + R
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT------AYNHAGLVE 449
D VA++ MI G N + D + F ML + P TY+ +L +Y+ L+
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
+S+ D +PL + ++D+ G + EA+ + PN W +++ C
Sbjct: 324 ARIIVSDSLAD---LPLDN---ALLDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGC 376
Query: 510 RLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYA 544
+ E + + +++ + Y+ ++I A
Sbjct: 377 SENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 210/372 (56%), Gaps = 4/372 (1%)
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSV 264
++I Y G ++ A +F +M + NL +WN +I + ARE+FD M RN
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHT 204
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
S M+AGY K+G+++SA ++F +M +D +S++ MI A N E+ F + +
Sbjct: 205 SWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
++ P++++L V+SACSQ G E + + + G + AL+D+Y++ G++
Sbjct: 265 MS--PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPM 322
Query: 385 AYELFHGLR-KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYN 443
A +F G++ KR +V++++MI G ++G+ +A++LF +M + P+ +++ +L A +
Sbjct: 323 ARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
Query: 444 HAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVW 502
HAGL+EEG F+ MK + P ++HYG MVDL GR+G L +AY+ I MP P A VW
Sbjct: 383 HAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 503 GALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGK 562
LL AC H N+EL E Q +L+ + G LLS+ YA G+W D +R + +
Sbjct: 443 RTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQ 502
Query: 563 NVIKTPGCSWTQ 574
+ KT S +
Sbjct: 503 RIKKTTAWSLVE 514
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 205/432 (47%), Gaps = 63/432 (14%)
Query: 8 TLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNP 67
+L+ C L QIH + G+ + F ++L + Y +L P
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVD-TDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKSCARIQDKLGGVSI 126
D+F + ++R +S+ + +V+++V+M R G P S + + +K+ + G +
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
H Q G ++ ++V T L+ +Y G V ARKVFDEM + N+V+WN++++ + D+
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 187 DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG 246
A+ +FDK+ ++ SWN M++GY KAG ++ A +F +MP R+ SW+TMI G +G
Sbjct: 189 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 248
Query: 247 ----SILSAREVFDAMPKRNSVSLITMIAG------------------------------ 272
S L RE+ A N VSL +++
Sbjct: 249 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 308
Query: 273 -----YSKSGDVDSAHKLFDQMDEKD-LLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
YS+ G+V A +F+ M EK ++S+ +MIA A + + +EA+ LFN M
Sbjct: 309 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEM--TAYG 366
Query: 327 VHPDKMTLASVISACSQLGDLEHWR----------WIESHINDFGVVLDDHLATALVDLY 376
V PD ++ S++ ACS G +E IE I +G +VDLY
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG---------CMVDLY 417
Query: 377 AKSGSIDKAYEL 388
+SG + KAY+
Sbjct: 418 GRSGKLQKAYDF 429
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 240/412 (58%), Gaps = 13/412 (3%)
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM----PE 229
LL Y K L++A+ + D++P K+V+SW +MIS YS+ G+ +A ++F +M +
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 230 RNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKL 285
N ++ T++ I + + +++ + K N S I +++ Y+K+G + A ++
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
F+ + E+D++S A+IA YAQ +EALE+F+ + ++ P+ +T AS+++A S L
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS--PNYVTYASLLTALSGLA 268
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
L+H + H+ + L +L+D+Y+K G++ A LF + +R ++++AM+
Sbjct: 269 LLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLV 328
Query: 406 GFGINGRASDAIKLFEQMLGE-NIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM--KDNG 462
G+ +G + ++LF M E + P+ VT +L+ +H + + G F+ M + G
Sbjct: 329 GYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYG 388
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV 522
P +HYG +VD+LGRAG +DEA+E I MP++P A V G+LL ACR+H +V++GE
Sbjct: 389 TKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVG 448
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+ I++E + G Y +LS++YA+ GRW D +R + K V K PG SW Q
Sbjct: 449 RRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 181/391 (46%), Gaps = 57/391 (14%)
Query: 15 TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGC 74
L +++HAH++ +L ++ LL L +L + + SW
Sbjct: 67 ALRDGQRVHAHMIKT--RYLPATYLRTRLLIFYGKCDCLED-ARKVLDEMPEKNVVSWTA 123
Query: 75 VIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLG 134
+I +SQ G EA++++ +M R P ++ L SC R G IHG +
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 135 YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFD 194
YD+ ++V ++LLD+Y+K G + AR++F+ + E++VVS ++++GY + G +EA +F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 195 KIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASW----NTMIAGYIDSG 246
++ + + +++ S+++ S +D + R L + N++I Y G
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCG 303
Query: 247 SILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ 306
++ AR +FD MP+R ++S M+ GYSK G
Sbjct: 304 NLSYARRLFDNMPERTAISWNAMLVGYSKHG----------------------------- 334
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
+E LELF M + E V PD +TL +V+S CS H R ++ +N F ++
Sbjct: 335 --LGREVLELFRLM-RDEKRVKPDAVTLLAVLSGCS------HGRMEDTGLNIFDGMVAG 385
Query: 367 HLAT--------ALVDLYAKSGSIDKAYELF 389
T +VD+ ++G ID+A+E
Sbjct: 386 EYGTKPGTEHYGCIVDMLGRAGRIDEAFEFI 416
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 258/490 (52%), Gaps = 21/490 (4%)
Query: 101 CPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTC--VYVQTALLDLYSKMGDVGTA 158
C + + L+ CA G +H + G Y+ AL Y+ G++ TA
Sbjct: 3 CLSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTA 62
Query: 159 RKVFDE--MAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK-------DVISWNSMIS 209
+K+FDE ++EK+ V W +LLS + + G L + LF ++ K V+ + +
Sbjct: 63 QKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCA 122
Query: 210 GYSKAGNMDQANSLFQKMPE-RNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLIT 268
G Q + + KM ++ N ++ Y G + + +F+ + +++ VS
Sbjct: 123 KLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTV 182
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
++ K ++ ++F +M E++ +++ M+A Y +E LEL M+
Sbjct: 183 VLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMV-FRCGHG 241
Query: 329 PDKMTLASVISACSQLGDLEHWRWI-------ESHINDFGVVLDDHLATALVDLYAKSGS 381
+ +TL S++SAC+Q G+L RW+ E + + D + TALVD+YAK G+
Sbjct: 242 LNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 382 IDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
ID + +F +RKR++V ++A+ G ++G+ I +F QM+ E + P+ +T+T +L+A
Sbjct: 302 IDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSA 360
Query: 442 YNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADV 501
+H+G+V+EG+ CF+S++ GL P VDHY MVDLLGRAG ++EA L+ MP PN V
Sbjct: 361 CSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVV 420
Query: 502 WGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKG 561
G+LL +C +H VE+ E + I++ Y L+S++Y GR D A LR ++
Sbjct: 421 LGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRK 480
Query: 562 KNVIKTPGCS 571
+ + K PG S
Sbjct: 481 RGIRKIPGLS 490
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 203/411 (49%), Gaps = 43/411 (10%)
Query: 5 KLTTLMKKC---STLNHAKQIHAHILINGLHHLEPLFIHHILLW------DVNNYKPLSH 55
K+ L++ C S L K++HA + +GL ++ + L ++ + L
Sbjct: 8 KVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFD 67
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
+ L D+ W ++ FS+ G + ++ L+V+M+R + ++ CA
Sbjct: 68 EI-----PLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCA 122
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
+++D HG +G T V V AL+D+Y K G V +++F+E+ EK+VVSW
Sbjct: 123 KLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTV 182
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER----- 230
+L +K L+ + +F ++P ++ ++W M++GY AG + L +M R
Sbjct: 183 VLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL 242
Query: 231 NLASWNTMIAGYIDSGSILSAREVFDAMPKRN--------------SVSLITMIAGYSKS 276
N + +M++ SG+++ R V K+ +L+ M Y+K
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDM---YAKC 299
Query: 277 GDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
G++DS+ +F M +++++++NA+ + A + K + +++F M++ V PD +T +
Sbjct: 300 GNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR---EVKPDDLTFTA 356
Query: 337 VISACSQLGDL-EHWRWIESHINDFGVVLD-DHLATALVDLYAKSGSIDKA 385
V+SACS G + E WR S + +G+ DH A +VDL ++G I++A
Sbjct: 357 VLSACSHSGIVDEGWRCFHS-LRFYGLEPKVDHYA-CMVDLLGRAGLIEEA 405
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/592 (26%), Positives = 282/592 (47%), Gaps = 85/592 (14%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGL---CPTSHAISSALKSCAR 116
+ + + D +W +I Q G+ + +M G P + ++C+
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
+ G +HG G + +VQ+++ YSK G+ A F E+ ++++ SW S+
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSI 302
Query: 177 LSGYLKAGDLDEAQHLFDKIPGK------------------------------------- 199
++ ++GD++E+ +F ++ K
Sbjct: 303 IASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF 362
Query: 200 --DVISWNSMISGYSKAGNMDQANSLFQKMPER-NLASWNTMIAGY-------------- 242
D NS++S Y K + A LF ++ E N +WNTM+ GY
Sbjct: 363 SLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFR 422
Query: 243 --------IDS-------------GSILSAREVFDAMPKRN---SVSLI-TMIAGYSKSG 277
IDS G++L + + + K + ++S++ ++I Y K G
Sbjct: 423 KIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMG 482
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
D+ A ++F + D +++++NAMIA Y + ++A+ LF+ M+ N P +TL ++
Sbjct: 483 DLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSE--NFKPSSITLVTL 539
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
+ AC G LE + I +I + ++ L+ AL+D+YAK G ++K+ ELF ++D
Sbjct: 540 LMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDA 599
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
V ++ MI G+G++G AI LF+QM ++ P T+ +L+A HAGLVE+G F
Sbjct: 600 VCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLK 659
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVEL 517
M + P + HY +VDLL R+G L+EA +++MP P+ +WG LL +C H E+
Sbjct: 660 MHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEM 719
Query: 518 GEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
G + + + GYY +L+++Y+ G+W++A++ R ++ V K G
Sbjct: 720 GIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/586 (21%), Positives = 247/586 (42%), Gaps = 92/586 (15%)
Query: 15 TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNY-KPLSHYVHPILHNLHNPDSFSWG 73
+L ++ +A I+ GL E +F+ L+ +Y KP + + H + D F W
Sbjct: 39 SLESLRKHNALIITGGLS--ENIFVASKLISSYASYGKP--NLSSRVFHLVTRRDIFLWN 94
Query: 74 CVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQV-HV 132
+I+ G + ++ + M G P + +CA + G +HG V
Sbjct: 95 SIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKH 154
Query: 133 LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHL 192
G+D V + + YSK G + A VFDEM +++VV+W +++SG+++ G+ +
Sbjct: 155 GGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGY 214
Query: 193 FDKI--PGKDVISWN----------------------------------------SMISG 210
K+ G DV N SM S
Sbjct: 215 LCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSF 274
Query: 211 YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR--------- 261
YSK+GN +A F+++ + ++ SW ++IA SG + + ++F M +
Sbjct: 275 YSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVI 334
Query: 262 ------------------------------NSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
+S ++++ Y K + A KLF ++ E
Sbjct: 335 SCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE 394
Query: 292 K-DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
+ + ++N M+ Y + + +ELF + + + D + SVIS+CS +G +
Sbjct: 395 EGNKEAWNTMLKGYGKMKCHVKCIELFRKI--QNLGIEIDSASATSVISSCSHIGAVLLG 452
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
+ + ++ + L + +L+DLY K G + A+ +F +++ ++AMI +
Sbjct: 453 KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHC 511
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
++ AI LF++M+ EN P+ +T +L A + G +E G + + +
Sbjct: 512 EQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS 571
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVE 516
++D+ + G L+++ EL + Q +A W ++ +H +VE
Sbjct: 572 AALIDMYAKCGHLEKSREL-FDAGNQKDAVCWNVMISGYGMHGDVE 616
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 171/654 (26%), Positives = 303/654 (46%), Gaps = 101/654 (15%)
Query: 8 TLMKKCSTLNHAK---QIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
+L+K C++L IH +L+NG +I L+ + L+H + +
Sbjct: 51 SLLKACASLQRLSFGLSIHQQVLVNGFS--SDFYISSSLVNLYAKFGLLAH-ARKVFEEM 107
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
D W +I +S+ G EA SL +M+ G+ P + L I
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---Q 164
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
+H + G+D + V ++L+LY K VG A+ +FD+M ++++VSWN+++SGY G
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 185 DLDEAQHLFDKIPGK---------------------------------------DVISWN 205
++ E L ++ G D+
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNS-- 263
++I+ Y K G + + + + +P +++ W MI+G + G A VF M + S
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 264 -------------------------------------VSLITMIAGYSKSGDVDSAHKLF 286
+L ++I Y+K G +D + +F
Sbjct: 345 SSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIF 404
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ--- 343
++M+E+DL+S+NA+I+ YAQN +AL LF M K + D T+ S++ ACS
Sbjct: 405 ERMNERDLVSWNAIISGYAQNVDLCKALLLFEEM-KFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 344 --LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYS 401
+G L H I S I +V TALVD+Y+K G ++ A F + +D+V++
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLV-----DTALVDMYSKCGYLEAAQRCFDSISWKDVVSWG 518
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KD 460
+I G+G +G+ A++++ + L + PN V + +L++ +H G+V++G F+SM +D
Sbjct: 519 ILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRD 578
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEI 520
G+ P +H +VDLL RA +++A++ T+P+ DV G +L ACR + E+ +I
Sbjct: 579 FGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDI 638
Query: 521 AVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+ I+L+ G+Y L +A + RWDD + ++ + K PG W++
Sbjct: 639 ICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPG--WSK 690
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 249/529 (47%), Gaps = 92/529 (17%)
Query: 76 IRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY 135
I S G + +S + M L P + S LK+CA +Q G+SIH QV V G+
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK 195
+ Y+ ++L++LY+K G + ARKVF+EM E++VV W +++ Y +AG + EA L ++
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 196 I------PGK------------------------------DVISWNSMISGYSKAGNMDQ 219
+ PG D+ NSM++ Y K ++
Sbjct: 138 MRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD 197
Query: 220 ANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM------PKRNS---------- 263
A LF +M +R++ SWNTMI+GY G++ ++ M P + +
Sbjct: 198 AKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGT 257
Query: 264 --------------------------VSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
+LITM Y K G ++++++ + + KD++ +
Sbjct: 258 MCDLEMGRMLHCQIVKTGFDVDMHLKTALITM---YLKCGKEEASYRVLETIPNKDVVCW 314
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
MI+ + + ++AL +F+ ML+ ++ + +ASV+++C+QLG + + ++
Sbjct: 315 TVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE--AIASVVASCAQLGSFDLGASVHGYV 372
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
G LD +L+ +YAK G +DK+ +F + +RDLV+++A+I G+ N A+
Sbjct: 373 LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKAL 432
Query: 418 KLFEQMLGENIGP-NLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP--LVDHYGIMV 474
LFE+M + + + T +L A + AG + G + + + P LVD +V
Sbjct: 433 LLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVD--TALV 490
Query: 475 DLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
D+ + G+L EA + + + + WG L+ H G+IA++
Sbjct: 491 DMYSKCGYL-EAAQRCFDSISWKDVVSWGILIAGYGFHGK---GDIALE 535
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 136/315 (43%), Gaps = 43/315 (13%)
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESH 356
+N+ I + + K+ L F+ ML ++ PD T S++ AC+ L L I
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKL--LPDTFTFPSLLKACASLQRLSFGLSIHQQ 71
Query: 357 INDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDA 416
+ G D +++++LV+LYAK G + A ++F +R+RD+V ++AMI + G +A
Sbjct: 72 VLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEA 131
Query: 417 IKLFEQMLGENIGPNLVT----YTGILTAYN----HAGLVEEGYWC----FNSMKDNGLV 464
L +M + I P VT +G+L H V G+ C NSM + L
Sbjct: 132 CSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLN--LY 189
Query: 465 PLVDHYGIMVDLLGR------------------AGWLDEAYELIINMP---TQPNADVWG 503
DH G DL + G + E +L+ M +P+ +G
Sbjct: 190 CKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFG 249
Query: 504 ALLLACRLHNNVELGEIAVQHCIKLESDT-VGYYSLLSSIYANLGRWDDAKKLRMGVKGK 562
A L ++E+G + +K D + + L ++Y G+ + + ++ + K
Sbjct: 250 ASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Query: 563 NVIKTPGCSWTQRVS 577
+V+ WT +S
Sbjct: 310 DVV-----CWTVMIS 319
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 199/307 (64%), Gaps = 5/307 (1%)
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
+I K G+ A K+ +++++++N MI Y +N + +EAL+ ML ++
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSF-TDIK 162
Query: 329 PDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
P+K + AS ++AC++LGDL H +W+ S + D G+ L+ L++ALVD+YAK G I + E+
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 389 FHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLV 448
F+ +++ D+ ++AMI GF +G A++AI++F +M E++ P+ +T+ G+LT +H GL+
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 449 EEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLL 507
EEG F M + + P ++HYG MVDLLGRAG + EAYELI +MP +P+ +W +LL
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 508 ACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKT 567
+ R + N ELGEIA+Q+ K +S G Y LLS+IY++ +W+ A+K+R + + + K
Sbjct: 343 SSRTYKNPELGEIAIQNLSKAKS---GDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 568 PGCSWTQ 574
G SW +
Sbjct: 400 KGKSWLE 406
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 118/248 (47%), Gaps = 35/248 (14%)
Query: 151 KMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEA-QHLFDKIPGKDV----ISWN 205
K+G+ G A+KV +++NV++WN ++ GY++ +EA + L + + D+ S+
Sbjct: 110 KIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFA 169
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVS 265
S ++ ++ G++ A + M IDSG L N++
Sbjct: 170 SSLAACARLGDLHHAKWVHSLM---------------IDSGIEL------------NAIL 202
Query: 266 LITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEI 325
++ Y+K GD+ ++ ++F + D+ +NAMI +A + EA+ +F+ M
Sbjct: 203 SSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE-- 260
Query: 326 NVHPDKMTLASVISACSQLGDLEHWR-WIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
+V PD +T +++ CS G LE + + F + A+VDL ++G + +
Sbjct: 261 HVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKE 320
Query: 385 AYELFHGL 392
AYEL +
Sbjct: 321 AYELIESM 328
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 105/210 (50%), Gaps = 10/210 (4%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAV-SLYVQMQRMGLCPTSHAISSALKSCARIQ 118
+L N + + +W +I + + Q+ EA+ +L + + P + +S+L +CAR+
Sbjct: 120 VLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLG 179
Query: 119 DKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
D +H + G + + +AL+D+Y+K GD+GT+R+VF + +V WN++++
Sbjct: 180 DLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMIT 239
Query: 179 GYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER---- 230
G+ G EA +F ++ + D I++ +++ S G +++ F M R
Sbjct: 240 GFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQ 299
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMP 259
L + M+ +G + A E+ ++MP
Sbjct: 300 PKLEHYGAMVDLLGRAGRVKEAYELIESMP 329
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/532 (29%), Positives = 253/532 (47%), Gaps = 83/532 (15%)
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H LG D + V +L+++Y K+ G AR VFD M+E++++SWNS+++G +
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 183 AGDLDEAQHLFDKI------PGK----------------------------------DVI 202
G EA LF ++ P + D
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 203 SWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR- 261
++I YS+ M +A LF++ +L +WN M+AGY S ++F M K+
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 262 ---NSVSLITMIAG-----------------------------------YSKSGDVDSAH 283
+ +L T+ Y K GD+ +A
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
FD + D +++ MI+ +N + + A +F+ M + V PD+ T+A++ A S
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM--RLMGVLPDEFTIATLAKASSC 630
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
L LE R I ++ D + T+LVD+YAK GSID AY LF + ++ A++AM
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK-DNG 462
+ G +G + ++LF+QM I P+ VT+ G+L+A +H+GLV E Y SM D G
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV 522
+ P ++HY + D LGRAG + +A LI +M + +A ++ LL ACR+ + E G+
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVA 810
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
++LE Y LLS++YA +WD+ K R +KG V K PG SW +
Sbjct: 811 TKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIE 862
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 206/466 (44%), Gaps = 96/466 (20%)
Query: 12 KCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHY--VHPILHNLHNPDS 69
K +L +Q+H L GL + L + + L +N Y L + + N+ D
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLM--LTVSNSL---INMYCKLRKFGFARTVFDNMSERDL 381
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
SW VI +Q G +EAV L++Q+ R GL P + ++S LK+ + + + G+S+ Q
Sbjct: 382 ISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPE---GLSLSKQ 438
Query: 130 VHV----LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
VHV + + +V TAL+D YS+ + A +F E ++V+WN++++GY ++ D
Sbjct: 439 VHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHD 497
Query: 186 LDEAQHLFDKI-------------------------------------PGKDVISWNS-- 206
+ LF + G D+ W S
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSG 557
Query: 207 MISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM------PK 260
++ Y K G+M A F +P + +W TMI+G I++G A VF M P
Sbjct: 558 ILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPD 617
Query: 261 RNSVSLI---------------------------------TMIAGYSKSGDVDSAHKLFD 287
+++ + +++ Y+K G +D A+ LF
Sbjct: 618 EFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFK 677
Query: 288 QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
+++ ++ ++NAM+ AQ+ + KE L+LF M + + PDK+T V+SACS G +
Sbjct: 678 RIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM--KSLGIKPDKVTFIGVLSACSHSGLV 735
Query: 348 -EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
E ++ + S D+G+ + + L D ++G + +A L +
Sbjct: 736 SEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 198/461 (42%), Gaps = 68/461 (14%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQF----IEAVSLYVQMQRMGLCPTSH-AISSA 110
Y + + + D SW ++ ++Q + I+ L ++ R + TS +S
Sbjct: 92 YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 111 LKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV 170
LK C S HG +G D +V AL+++Y K G V + +F+EM ++V
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 171 VSWNSLLSGYLKAG------DLDEAQH------------LFDKIPGKD------------ 200
V WN +L YL+ G DL A H L +I G D
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANG 271
Query: 201 --------VISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMIAGYIDSGSI 248
+I N +S Y +G F M E ++ ++ M+A + S+
Sbjct: 272 NDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 249 LSAREVFDAMPKRNSVSLI-----TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIAC 303
++V M + + L+ ++I Y K A +FD M E+DL+S+N++IA
Sbjct: 332 ALGQQV-HCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAG 390
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD-LEHWRWIESHINDFGV 362
AQN EA+ LF +L+ + PD+ T+ SV+ A S L + L + + H
Sbjct: 391 IAQNGLEVEAVCLFMQLLR--CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN 448
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQ 422
V D ++TAL+D Y+++ + +A LF DLVA++AM+ G+ + +KLF
Sbjct: 449 VSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFAL 507
Query: 423 M--LGENIG----PNLVTYTGILTAYN-----HAGLVEEGY 452
M GE + G L A N HA ++ GY
Sbjct: 508 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 175/383 (45%), Gaps = 55/383 (14%)
Query: 111 LKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV 170
L++ D + G H ++ + ++ L+ +YSK G + AR+VFD+M ++++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 171 VSWNSLLSGYLKAGD-----LDEAQHLFDKIPGKDVI-------------------SWNS 206
VSWNS+L+ Y ++ + + +A LF +I +DV+ W S
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 207 ---------------------MISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
+++ Y K G + + LF++MP R++ WN M+ Y++
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 246 GSILSAREVFDAM------PKRNSVSLITMIAGY-SKSGDVDSAHKLFDQMDEKDLLSYN 298
G A ++ A P ++ L+ I+G S +G V S D +++ N
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRN 284
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
++ Y + + L+ F M+ E +V D++T +++ ++ L + +
Sbjct: 285 KGLSEYLHSGQYSALLKCFADMV--ESDVECDQVTFILMLATAVKVDSLALGQQVHCMAL 342
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIK 418
G+ L ++ +L+++Y K A +F + +RDL++++++I G NG +A+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 419 LFEQMLGENIGPNLVTYTGILTA 441
LF Q+L + P+ T T +L A
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKA 425
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/431 (20%), Positives = 184/431 (42%), Gaps = 62/431 (14%)
Query: 6 LTTLMKKCSTLNH----AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPIL 61
+T+++K S+L +KQ+H H + ++++ F+ L+ + + + IL
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAI--KINNVSDSFVSTALIDAYSRNRCMKE--AEIL 474
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
HN D +W ++ ++Q + + L+ M + G +++ K+C +
Sbjct: 475 FERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G +H GYD ++V + +LD+Y K GD+ A+ FD + + V+W +++SG +
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 182 KAGDLDEAQHLFDK------IPGKDVISW------------------------------- 204
+ G+ + A H+F + +P + I+
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 205 --NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP--- 259
S++ Y+K G++D A LF+++ N+ +WN M+ G G ++F M
Sbjct: 655 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG 714
Query: 260 -KRNSVSLITMIAGYSKSGDVDSAHKLFDQMD-----EKDLLSYNAMIACYAQNSKPKEA 313
K + V+ I +++ S SG V A+K M + ++ Y+ + + K+A
Sbjct: 715 IKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQA 774
Query: 314 LELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALV 373
L M ++ ++++AC GD E + + + + + LD L
Sbjct: 775 ENLIESM-----SMEASASMYRTLLAACRVQGDTETGKRVATKLLELE-PLDSSAYVLLS 828
Query: 374 DLYAKSGSIDK 384
++YA + D+
Sbjct: 829 NMYAAASKWDE 839
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 263/501 (52%), Gaps = 51/501 (10%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
E++ ++ +M L PT S + SC+ G +HG GY+ V A +
Sbjct: 274 ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATM 330
Query: 147 DLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNS 206
+YS D G A KVF+ + E KD+++WN+
Sbjct: 331 TMYSSFEDFGAAHKVFESLEE-------------------------------KDLVTWNT 359
Query: 207 MISGYSKAGNMDQANSLFQKM----PERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN 262
MIS Y++A A S++++M + + ++ +++A +D L E+ A +
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLD----LDVLEMVQACIIKF 415
Query: 263 SVSLI-----TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELF 317
+S +I+ YSK+G ++ A LF++ K+L+S+NA+I+ + N P E LE F
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
+ +L+ E+ + PD TL++++S C L +++ G + + AL+++Y+
Sbjct: 476 SCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYS 535
Query: 378 KSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE-NIGPNLVTYT 436
+ G+I + E+F+ + ++D+V+++++I + +G +A+ ++ M E + P+ T++
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFS 595
Query: 437 GILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELI-INMP 494
+L+A +HAGLVEEG FNSM + +G++ VDH+ +VDLLGRAG LDEA L+ I+
Sbjct: 596 AVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEK 655
Query: 495 T-QPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAK 553
T DVW AL AC H +++LG++ + ++ E D Y LS+IYA G W +A+
Sbjct: 656 TIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAE 715
Query: 554 KLRMGVKGKNVIKTPGCSWTQ 574
+ R + +K GCSW +
Sbjct: 716 ETRRAINMIGAMKQRGCSWMR 736
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 215/444 (48%), Gaps = 31/444 (6%)
Query: 79 FSQKGQFIEAVSLYVQMQR-MGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDT 137
++ G+ A+ L+ + R L P +++S A+ + ++D + G +H G
Sbjct: 31 LTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLC 90
Query: 138 CVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP 197
+V LL LY ++G++ + +K FDE+ E +V SW +LLS K GD++ A +FDK+P
Sbjct: 91 HSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMP 150
Query: 198 GKDVIS-WNSMISGYSKAGNMDQANSLFQKMPE---RNLASWNTMIAGYIDSGSILSARE 253
+D ++ WN+MI+G ++G + + LF++M + R+ I D GS+ ++
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQ 210
Query: 254 VFDAMPK-----RNSV--SLITMIAGYSKSGDVDSAHKLFDQMD--EKDLLSYNAMIACY 304
V + K +SV +LITM Y V A +F++ D +D +++N +I
Sbjct: 211 VHSLVIKAGFFIASSVVNALITM---YFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGL 267
Query: 305 AQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS--QLGDLEHWRWIESHINDFGV 362
A K E+L +F ML E ++ P +T SV+ +CS +G H I++ + +
Sbjct: 268 A-GFKRDESLLVFRKML--EASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTL 324
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQ 422
V + A + +Y+ A+++F L ++DLV ++ MI + A+ ++++
Sbjct: 325 V-----SNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 423 MLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGW 482
M + P+ T+ +L ++E C GL ++ ++ + G
Sbjct: 380 MHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKF---GLSSKIEISNALISAYSKNGQ 436
Query: 483 LDEAYELIINMPTQPNADVWGALL 506
+++A +L+ + N W A++
Sbjct: 437 IEKA-DLLFERSLRKNLISWNAII 459
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 30/286 (10%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
H + +L D +W +I ++Q A+S+Y +M +G+ P S L + +
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
D L V + G + + + AL+ YSK G + A +F+ KN++SWN+++
Sbjct: 403 -DVLEMV--QACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 178 SGYLKAGDLDEAQHLFDKIPGKDV----------------ISWNSMISGYSKAGNMDQAN 221
SG+ G E F + +V +S +S++ G+ A
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLM-----LGSQTHAY 514
Query: 222 SLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDS 281
L + L N +I Y G+I ++ EVF+ M +++ VS ++I+ YS+ G+ ++
Sbjct: 515 VLRHGQFKETLIG-NALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 282 AHKLFDQMDEK-----DLLSYNAMIACYAQNSKPKEALELFNYMLK 322
A + M ++ D +++A+++ + +E LE+FN M++
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE 619
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 17/196 (8%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQM--QRMGLCPTSHAISSALKSCARIQDKLGGVSIHG 128
SW +I F G E + + + + + P ++ +S+ L C + G H
Sbjct: 454 SWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 129 QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDE 188
V G + AL+++YS+ G + + +VF++M+EK+VVSWNSL+S Y + G+ +
Sbjct: 514 YVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGEN 573
Query: 189 AQHLFDKI--PGK---DVISWNSMISGYSKAGNMDQANSLFQKMPE-----RNLASWNTM 238
A + + + GK D ++++++S S AG +++ +F M E RN+ ++ +
Sbjct: 574 AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCL 633
Query: 239 I-----AGYIDSGSIL 249
+ AG++D L
Sbjct: 634 VDLLGRAGHLDEAESL 649
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 235/431 (54%), Gaps = 17/431 (3%)
Query: 154 DVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI--------PGKDVISWN 205
D+ A VF + KN WN+++ G+ ++ + A +F + P + +++
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYP 130
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKR 261
S+ Y + G L + + L NTM+ Y+ G ++ A +F M
Sbjct: 131 SVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF 190
Query: 262 NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYML 321
+ V+ +MI G++K G +D A LFD+M +++ +S+N+MI+ + +N + K+AL++F M
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM- 249
Query: 322 KPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGS 381
E +V PD T+ S+++AC+ LG E RWI +I L+ + TAL+D+Y K G
Sbjct: 250 -QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGC 308
Query: 382 IDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
I++ +F K+ L +++MI G NG A+ LF ++ + P+ V++ G+LTA
Sbjct: 309 IEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTA 368
Query: 442 YNHAGLVEEGYWCFNSMKDNGLV-PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNAD 500
H+G V F MK+ ++ P + HY +MV++LG AG L+EA LI NMP + +
Sbjct: 369 CAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 501 VWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVK 560
+W +LL ACR NVE+ + A + KL+ D Y LLS+ YA+ G +++A + R+ +K
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMK 488
Query: 561 GKNVIKTPGCS 571
+ + K GCS
Sbjct: 489 ERQMEKEVGCS 499
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 247/534 (46%), Gaps = 64/534 (11%)
Query: 4 TKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
T L + +CST+ KQIHA ++ GL + + +L + + + +Y + +
Sbjct: 26 TYLRLIDTQCSTMRELKQIHASLIKTGLIS-DTVTASRVLAFCCASPSDM-NYAYLVFTR 83
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC------PTSHAISSALKSCARI 117
+++ + F W +IR FS+ A+S+++ M LC P S K+ R+
Sbjct: 84 INHKNPFVWNTIIRGFSRSSFPEMAISIFIDM----LCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G +HG V G + +++ +L +Y G + A ++F M +VV+WNS++
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199
Query: 178 SGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNT 237
G+ K G +D+AQ+LFD++P ++ +SWNSMISG+ + G A +F++M E+++
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259
Query: 238 MIAGYIDSGSILSARE--------VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+ +++ + L A E + + NS+ + +I Y K G ++ +F+
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECA 319
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-- 347
+K L +N+MI A N + A++LF+ + + + PD ++ V++AC+ G++
Sbjct: 320 PKKQLSCWNSMILGLANNGFEERAMDLFSELERS--GLEPDSVSFIGVLTACAHSGEVHR 377
Query: 348 --EHWR------WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLV 398
E +R IE I + T +V++ +G +++A L + + D V
Sbjct: 378 ADEFFRLMKEKYMIEPSIKHY---------TLMVNVLGGAGLLEEAEALIKNMPVEEDTV 428
Query: 399 AYSAMIYGFGING------RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
+S+++ G RA+ +K + E G Y + AY GL EE
Sbjct: 429 IWSSLLSACRKIGNVEMAKRAAKCLKKLDP--DETCG-----YVLLSNAYASYGLFEEAV 481
Query: 453 WCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQP-NADVWGAL 505
MK+ + V I VD E +E I T P +A+++ L
Sbjct: 482 EQRLLMKERQMEKEVGCSSIEVDF--------EVHEFISCGGTHPKSAEIYSLL 527
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 257/513 (50%), Gaps = 43/513 (8%)
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
F W +IR +++ QF +SL+ Q+ R P + + + + D G IHG
Sbjct: 72 FLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHG- 130
Query: 130 VHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEA 189
+ + S +G FD++ +V Y KAG + EA
Sbjct: 131 ----------------IAIVSGLG--------FDQICGSAIVK------AYSKAGLIVEA 160
Query: 190 QHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDS 245
LF IP D+ WN MI GY G D+ +LF M R N + + +G ID
Sbjct: 161 SKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDP 220
Query: 246 GSILSAREVFDAMPKRN----SVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMI 301
+L A V K N S ++ YS+ + SA +F+ + E DL++ +++I
Sbjct: 221 SLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLI 280
Query: 302 ACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFG 361
Y++ KEAL LF + PD + +A V+ +C++L D + + S++ G
Sbjct: 281 TGYSRCGNHKEALHLFAELRMS--GKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 362 VVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFE 421
+ LD + +AL+D+Y+K G + A LF G+ ++++V+++++I G G++G AS A + F
Sbjct: 339 LELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFT 398
Query: 422 QMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRA 480
++L + P+ +T++ +L H+GL+ +G F MK G+ P +HY MV L+G A
Sbjct: 399 EILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMA 458
Query: 481 GWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK-LESDTVGYYSLL 539
G L+EA+E ++++ ++ + GALL C +H N L E+ ++ K E Y +L
Sbjct: 459 GKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVML 518
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
S++YA GRWD+ ++LR G+ K PG SW
Sbjct: 519 SNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 91/172 (52%), Gaps = 4/172 (2%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ +++ PD + +I +S+ G EA+ L+ +++ G P ++ L SCA + D
Sbjct: 264 VFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSD 323
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
+ G +H V LG + + V +AL+D+YSK G + A +F + EKN+VS+NSL+ G
Sbjct: 324 SVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Query: 180 YLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKM 227
G A F +I D I++++++ +G +++ +F++M
Sbjct: 384 LGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERM 435
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 277/544 (50%), Gaps = 41/544 (7%)
Query: 40 HHILLWD-VNNY--KPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQ 96
HHIL + + +Y K L + + + D +W +I ++ A + +M
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 97 RMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMG-DV 155
+ G P +SS LKSC ++ G +HG V LG + +YV A++++Y+ +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 156 GTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGY 211
A +F ++ KN V+W +L++G+ HL D I G K ++ N+ ++ Y
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGF---------THLGDGIGGLKMYKQMLLENAEVTPY 214
Query: 212 SKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIA 271
+ R AS +++ G S++ R +P NS+ +
Sbjct: 215 CIT------------IAVRASASIDSVTTGKQIHASVIK-RGFQSNLPVMNSI-----LD 256
Query: 272 GYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDK 331
Y + G + A F +M++KDL+++N +I+ + S EAL +F P+
Sbjct: 257 LYCRCGYLSEAKHYFHEMEDKDLITWNTLIS-ELERSDSSEALLMFQRF--ESQGFVPNC 313
Query: 332 MTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
T S+++AC+ + L + + I G + LA AL+D+YAK G+I + +F
Sbjct: 314 YTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGE 373
Query: 392 L-RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEE 450
+ +R+LV++++M+ G+G +G ++A++LF++M+ I P+ + + +L+A HAGLVE+
Sbjct: 374 IVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEK 433
Query: 451 GYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
G FN M+ G+ P D Y +VDLLGRAG + EAYEL+ MP +P+ WGA+L AC
Sbjct: 434 GLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Query: 510 RLHN-NVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTP 568
+ H N + +A + ++L+ VG Y +LS IYA G+W D ++R ++ K
Sbjct: 494 KAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEA 553
Query: 569 GCSW 572
G SW
Sbjct: 554 GMSW 557
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 114/229 (49%), Gaps = 3/229 (1%)
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFN 318
PK++ + +I Y + G V+ A LFD+M ++D++++ AMI YA ++ A E F+
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 319 YMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAK 378
M+K P++ TL+SV+ +C + L + + + G+ ++ A++++YA
Sbjct: 101 EMVKQ--GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYAT 158
Query: 379 -SGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTG 437
S +++ A +F ++ ++ V ++ +I GF G +K+++QML EN T
Sbjct: 159 CSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI 218
Query: 438 ILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA 486
+ A V G S+ G + ++DL R G+L EA
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEA 267
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 275/564 (48%), Gaps = 45/564 (7%)
Query: 17 NHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVI 76
H QIHA ++ G + L I L+ +S Y + L + +I
Sbjct: 31 RHITQIHAFVISTG-NLLNGSSISRDLIASCGRIGEIS-YARKVFDELPQRGVSVYNSMI 88
Query: 77 RFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYD 136
+S+ E + LY QM + P S + +K+C G ++ + GY
Sbjct: 89 VVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYK 148
Query: 137 TCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI 196
V+V +++L+LY +K G +DEA+ LF K+
Sbjct: 149 NDVFVCSSVLNLY-------------------------------MKCGKMDEAEVLFGKM 177
Query: 197 PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI----DSGSILSAR 252
+DVI W +M++G+++AG +A +++M ++ G + D G R
Sbjct: 178 AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGR 237
Query: 253 EVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNS 308
V + + N V +++ Y+K G ++ A ++F +M K +S+ ++I+ +AQN
Sbjct: 238 SVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNG 297
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
+A E M + PD +TL V+ ACSQ+G L+ R + +I V LD
Sbjct: 298 LANKAFEAVVEM--QSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVT 354
Query: 369 ATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENI 428
ATAL+D+Y+K G++ + E+F + ++DLV ++ MI +GI+G + + LF +M NI
Sbjct: 355 ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNI 414
Query: 429 GPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAY 487
P+ T+ +L+A +H+GLVE+G F+ M + + P HY ++DLL RAG ++EA
Sbjct: 415 EPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEAL 474
Query: 488 ELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLG 547
++I + +W ALL C H N+ +G+IA ++L D++G +L+S+ +A
Sbjct: 475 DMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATAN 534
Query: 548 RWDDAKKLRMGVKGKNVIKTPGCS 571
+W + K+R ++ + K PG S
Sbjct: 535 KWKEVAKVRKLMRNGAMEKVPGYS 558
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 246/472 (52%), Gaps = 16/472 (3%)
Query: 111 LKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV 170
L+ CAR + ++H + LG C + L+++Y K G A +VFDEM ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 171 VSWNSLLSGY----LKAGDLDEAQHLFDKIPGK-DVISWNSMISGYSKAGNMDQANSLFQ 225
++W S+L+ L L + + D +++++ + G++D +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 226 KMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDS 281
A+ ++++ Y G + SA+ VFD++ +N++S M++GY+KSG +
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 282 AHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
A +LF + K+L S+ A+I+ + Q+ K EA +F M + +++ D + L+S++ AC
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDI-LDPLVLSSIVGAC 248
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYS 401
+ L R + + G ++ AL+D+YAK + A ++F +R RD+V+++
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KD 460
++I G +G+A A+ L++ M+ + PN VT+ G++ A +H G VE+G F SM KD
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD 368
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEI 520
G+ P + HY ++DLLGR+G LDEA LI MP P+ W ALL AC+ ++G
Sbjct: 369 YGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIR 428
Query: 521 AVQHCI---KLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
H + KL+ + Y LLS+IYA+ W + R + V K PG
Sbjct: 429 IADHLVSSFKLKDPST--YILLSNIYASASLWGKVSEARRKLGEMEVRKDPG 478
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 224/451 (49%), Gaps = 17/451 (3%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
L + TL AK +HAHI+ G+ PL + L+ SH + + + + D
Sbjct: 12 LCARNRTLTTAKALHAHIVKLGIVQCCPL--ANTLVNVYGKCGAASHALQ-VFDEMPHRD 68
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMG-LCPTSHAISSALKSCARIQDKLGGVSIH 127
+W V+ +Q + +S++ + L P S+ +K+CA + G +H
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
V Y V+++L+D+Y+K G + +A+ VFD + KN +SW +++SGY K+G +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI---- 243
EA LF +P K++ SW ++ISG+ ++G +A S+F +M + + ++ I
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 244 -DSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYN 298
+ + ++ R+V + S + +I Y+K DV +A +F +M +D++S+
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWT 308
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI-ESHI 357
++I AQ+ + ++AL L++ M+ V P+++T +I ACS +G +E R + +S
Sbjct: 309 SLIVGMAQHGQAEKALALYDDMVSH--GVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGINGRASDA 416
D+G+ T L+DL +SG +D+A L H + D ++A++ GR
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 417 IKLFEQMLGENIGPNLVTYTGILTAYNHAGL 447
I++ + ++ + TY + Y A L
Sbjct: 427 IRIADHLVSSFKLKDPSTYILLSNIYASASL 457
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 191/304 (62%), Gaps = 4/304 (1%)
Query: 273 YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
Y+ GDV SA+K+FD+M EKDL+++N++I +A+N KP+EAL L+ M I PD
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK--PDGF 90
Query: 333 TLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
T+ S++SAC+++G L + + ++ G+ + H + L+DLYA+ G +++A LF +
Sbjct: 91 TIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLG-ENIGPNLVTYTGILTAYNHAGLVEEG 451
++ V+++++I G +NG +AI+LF+ M E + P +T+ GIL A +H G+V+EG
Sbjct: 151 VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEG 210
Query: 452 YWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACR 510
+ F M++ + P ++H+G MVDLL RAG + +AYE I +MP QPN +W LL AC
Sbjct: 211 FEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACT 270
Query: 511 LHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGC 570
+H + +L E A ++LE + G Y LLS++YA+ RW D +K+R + V K PG
Sbjct: 271 VHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGH 330
Query: 571 SWTQ 574
S +
Sbjct: 331 SLVE 334
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 136/283 (48%), Gaps = 59/283 (20%)
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +IH V G+ + +YVQ +LL LY+ GDV +A KVFD+M EK++V+WNS+++G+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 183 AGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE----RNLAS 234
G +EA L+ ++ K D + S++S +K G + + M + RNL S
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
N ++ Y G + A+ +FD M +NSVS ++I G
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG---------------------- 164
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG----DLEHW 350
A N KEA+ELF YM E + P ++T ++ ACS G E++
Sbjct: 165 ---------LAVNGFGKEAIELFKYMESTE-GLLPCEITFVGILYACSHCGMVKEGFEYF 214
Query: 351 RW------IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
R IE I FG +VDL A++G + KAYE
Sbjct: 215 RRMREEYKIEPRIEHFG---------CMVDLLARAGQVKKAYE 248
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 22/280 (7%)
Query: 19 AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRF 78
+ IH+ ++ +G L +++ + LL N ++ + + + D +W VI
Sbjct: 7 GETIHSVVIRSGFGSL--IYVQNSLLHLYANCGDVAS-AYKVFDKMPEKDLVAWNSVING 63
Query: 79 FSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHV----LG 134
F++ G+ EA++LY +M G+ P I S L +CA K+G +++ +VHV +G
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA----KIGALTLGKRVHVYMIKVG 119
Query: 135 YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFD 194
++ LLDLY++ G V A+ +FDEM +KN VSW SL+ G G EA LF
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 195 KIPGKD-----VISWNSMISGYSKAGNMDQANSLFQKMPER-----NLASWNTMIAGYID 244
+ + I++ ++ S G + + F++M E + + M+
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 245 SGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSAH 283
+G + A E +MP + N V T++ + GD D A
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
+LG+ H I S FG ++ ++ +L+ LYA G + AY++F + ++DLVA+++
Sbjct: 5 RLGETIHSVVIRS---GFGSLI--YVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNS 59
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+I GF NG+ +A+ L+ +M + I P+ T +L+A G + G M G
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
L + +++DL R G ++EA L M N+ W +L++
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVG 164
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 160/608 (26%), Positives = 292/608 (48%), Gaps = 88/608 (14%)
Query: 18 HAKQIHAHILINGLHHLEP-LFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVI 76
H Q+HA I++ ++P F+ L+ +H + + ++FS+ ++
Sbjct: 40 HVLQLHARIVV---FSIKPDNFLASKLISFYTRQDRFRQALH-VFDEITVRNAFSYNALL 95
Query: 77 RFFSQKGQFIEAVSLYVQ------MQRMGLCPTSHAISSALKSCARIQDK-LGGVS--IH 127
++ + + +A SL++ P S +IS LK+ + D LG ++ +H
Sbjct: 96 IAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVH 155
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
G V G+D+ V+V N +++ Y K +++
Sbjct: 156 GFVIRGGFDSDVFVG-------------------------------NGMITYYTKCDNIE 184
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM-------------------- 227
A+ +FD++ +DV+SWNSMISGYS++G+ + +++ M
Sbjct: 185 SARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQAC 244
Query: 228 --------------------PERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI 267
+ +L+ N +I Y GS+ AR +FD M +++SV+
Sbjct: 245 GQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYG 304
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV 327
+I+GY G V A LF +M+ L ++NAMI+ QN+ +E + F M++
Sbjct: 305 AIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIR--CGS 362
Query: 328 HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
P+ +TL+S++ + + +L+ + I + G + ++ T+++D YAK G + A
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 388 LFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGL 447
+F + R L+A++A+I + ++G + A LF+QM P+ VT T +L+A+ H+G
Sbjct: 423 VFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGD 482
Query: 448 VEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+ F+SM + P V+HY MV +L RAG L +A E I MP P A VWGALL
Sbjct: 483 SDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALL 542
Query: 507 LACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIK 566
+ ++E+ A ++E + G Y++++++Y GRW++A+ +R +K + K
Sbjct: 543 NGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKK 602
Query: 567 TPGCSWTQ 574
PG SW +
Sbjct: 603 IPGTSWIE 610
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 167/603 (27%), Positives = 288/603 (47%), Gaps = 86/603 (14%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
Y + + + DS SW +I ++ G+ +A L+ M+R G ++ S LK A
Sbjct: 53 YANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIA 112
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
++ G +HG V GY+ VYV ++L+D+Y+K V A + F E++E N VSWN+
Sbjct: 113 SVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNA 172
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVISWN--------SMISGYSKAGNMDQANSLFQKM 227
L++G+++ D+ A L + K ++ + +++ + Q ++ K+
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 228 P-ERNLASWNTMIAGYIDSGSILSAREVFDAM-PKRNSVSLITMIAGYSKSGDVDSAHKL 285
+ + N MI+ Y D GS+ A+ VFD + ++ +S +MIAG+SK +SA +L
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 286 FDQMD----EKDLLSY-----------------------------------NAMIACYAQ 306
F QM E D+ +Y NA+I+ Y Q
Sbjct: 293 FIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 352
Query: 307 --NSKPKEALELF-------------------------------NYMLKPEINVHPDKMT 333
++AL LF +Y+ EI V D
Sbjct: 353 FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKV--DDYA 410
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL- 392
++++ +CS L L+ + I + G V ++ + ++L+ +Y+K G I+ A + F +
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
K VA++AMI G+ +G ++ LF QM +N+ + VT+T ILTA +H GL++EG
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
Query: 453 WCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRL 511
N M+ + P ++HY VDLLGRAG +++A ELI +MP P+ V L CR
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 590
Query: 512 HNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+E+ H +++E + Y LS +Y++L +W++ ++ +K + V K PG S
Sbjct: 591 CGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWS 650
Query: 572 WTQ 574
W +
Sbjct: 651 WIE 653
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/492 (23%), Positives = 216/492 (43%), Gaps = 96/492 (19%)
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFD--KI 196
+YV +LD Y K G +G A +FDEM +++ VSWN+++SGY G L++A LF K
Sbjct: 35 IYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKR 94
Query: 197 PGKDVISW-------------------------------------NSMISGYSKAGNMDQ 219
G DV + +S++ Y+K ++
Sbjct: 95 SGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVED 154
Query: 220 ANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSL------------- 266
A F+++ E N SWN +IAG++ I +A + M + +V++
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD 214
Query: 267 -----------------------IT----MIAGYSKSGDVDSAHKLFDQM-DEKDLLSYN 298
IT MI+ Y+ G V A ++FD + KDL+S+N
Sbjct: 215 DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWN 274
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
+MIA ++++ + A ELF M + V D T ++SACS + + +
Sbjct: 275 SMIAGFSKHELKESAFELFIQMQRHW--VETDIYTYTGLLSACSGEEHQIFGKSLHGMVI 332
Query: 359 DFGVVLDDHLATALVDLYAK--SGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDA 416
G+ AL+ +Y + +G+++ A LF L+ +DL++++++I GF G + DA
Sbjct: 333 KKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDA 392
Query: 417 IKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDL 476
+K F + I + ++ +L + + ++ G +G V ++ +
Sbjct: 393 VKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVM 452
Query: 477 LGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV----QHC---IKLE 529
+ G ++ A + + ++ + W A++L H LG++++ Q C +KL
Sbjct: 453 YSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG---LGQVSLDLFSQMCNQNVKL- 508
Query: 530 SDTVGYYSLLSS 541
D V + ++L++
Sbjct: 509 -DHVTFTAILTA 519
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 41/282 (14%)
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP 259
D+ N ++ Y K G + AN LF +MP+R+ SWNTMI+GY G + A +F M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 260 KRNS----VSLITMIAG-----------------------------------YSKSGDVD 280
+ S S ++ G Y+K V+
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 281 SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA 340
A + F ++ E + +S+NA+IA + Q K A L M + + V D T A +++
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM-EMKAAVTMDAGTFAPLLTL 212
Query: 341 CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL-RKRDLVA 399
+ + + + G+ + + A++ YA GS+ A +F GL +DL++
Sbjct: 213 LDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLIS 272
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
+++MI GF + A +LF QM + ++ TYTG+L+A
Sbjct: 273 WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 171/398 (42%), Gaps = 48/398 (12%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L TL+ N KQ+HA +L GL H + I + ++ + +S
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQH--EITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+ D SW +I FS+ A L++QMQR + + + L +C+ + ++ G S
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKM--GDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
+HG V G + AL+ +Y + G + A +F+ + K+++SWNS+++G+ +
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 184 GDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPERNLAS----W 235
G ++A F + ++ ++++++ S + + + S
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 236 NTMIAGYIDSGSILSAREVFDAM-PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK-- 292
+++I Y G I SAR+ F + K ++V+ MI GY++ G + LF QM +
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 293 --DLLSYNAMIACYAQNSKPKEALELFN-----YMLKPEIN------------------- 326
D +++ A++ + +E LEL N Y ++P +
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 327 -------VHPDKMTLASVISACSQLGDLEHWRWIESHI 357
++PD M L + + C G++E + +H+
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHL 604
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 158/344 (45%), Gaps = 26/344 (7%)
Query: 7 TTLMKKCSTLNH---AKQIHAHILINGLHHL----EPLFIHHILLWDVNNYKPLSHYVHP 59
T L+ CS H K +H ++ GL + L +I LS
Sbjct: 309 TGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALS----- 363
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ +L + D SW +I F+QKG +AV + ++ + +A S+ L+SC+ +
Sbjct: 364 LFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLAT 423
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK-NVVSWNSLLS 178
G IH G+ + +V ++L+ +YSK G + +ARK F +++ K + V+WN+++
Sbjct: 424 LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMIL 483
Query: 179 GYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKM-PERNLA 233
GY + G + LF ++ ++V +++ ++++ S G + + L M P +
Sbjct: 484 GYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQ 543
Query: 234 SWNTMIAGYID----SGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSAHKLFD- 287
A +D +G + A+E+ ++MP + + L T + G+++ A ++ +
Sbjct: 544 PRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANH 603
Query: 288 --QMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
+++ +D +Y ++ Y+ K +E + M + + P
Sbjct: 604 LLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVP 647
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/591 (27%), Positives = 267/591 (45%), Gaps = 118/591 (19%)
Query: 66 NP--DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
NP ++ SW +I + + G +EA +L+ +MQ G+ P + + S L+ C + L G
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM-AEKNVVSWNSLLSGYLK 182
IHG G+D V V LL +Y++ + A +F+ M EKN V+W S+L+GY +
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 183 AGDLDEAQHLFDKIPGK---------------------------------------DVIS 203
G +A F + + ++
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 204 WNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN- 262
+++I Y+K M+ A +L + M ++ SWN+MI G + G I A +F M +R+
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 263 -------------------------------------SVSLI--TMIAGYSKSGDVDSAH 283
+ L+ ++ Y+K G +DSA
Sbjct: 325 KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
K+F+ M EKD++S+ A++ N EAL+LF M I PDK+ ASV+SA ++
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT--PDKIVTASVLSASAE 442
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
L LE + + + G + +LV +Y K GS++ A +F+ + RDL+ ++ +
Sbjct: 443 LTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCL 502
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGL 463
I G+ NG DA + F+ M T Y G+
Sbjct: 503 IVGYAKNGLLEDAQRYFDSM---------------RTVY-------------------GI 528
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
P +HY M+DL GR+G + +L+ M +P+A VW A+L A R H N+E GE A +
Sbjct: 529 TPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAK 588
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
++LE + Y LS++Y+ GR D+A +R +K +N+ K PGCSW +
Sbjct: 589 TLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVE 639
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 213/490 (43%), Gaps = 95/490 (19%)
Query: 166 AEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQ 225
A++ + N LL K+G +DEA+ +FDK+P +D +WN+MI YS + + A LF+
Sbjct: 24 ADRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFR 83
Query: 226 KMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK--------------RNSVSLITMIA 271
P +N SWN +I+GY SGS + A +F M R SL+ ++
Sbjct: 84 SNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLR 143
Query: 272 G-------------------------YSKSGDVDSAHKLFDQMD-EKDLLSYNAMIACYA 305
G Y++ + A LF+ M+ EK+ +++ +M+ Y+
Sbjct: 144 GEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYS 203
Query: 306 QNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD 365
QN +A+E F L+ E N ++ T SV++AC+ + + I G +
Sbjct: 204 QNGFAFKAIECFRD-LRREGN-QSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN 261
Query: 366 DHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLG 425
++ +AL+D+YAK ++ A L G+ D+V++++MI G G +A+ +F +M
Sbjct: 262 IYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHE 321
Query: 426 ENIGPNLVTYTGILTAY------------NHAGLVEEGYWCFNSMKDNGLVPLVDHYGIM 473
++ + T IL + H +V+ GY + + +N LV + GIM
Sbjct: 322 RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYK-LVNNALVDMYAKRGIM 380
Query: 474 VDLL---------------------GRAGWLDEAYELIINMPT---QPNADVWGALLLAC 509
L G DEA +L NM P+ V ++L A
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSAS 440
Query: 510 RLHNNVELGEIAVQHCIKLESDTVGYYSLLS------SIYANLGRWDDAKKLRMGVKGKN 563
+E G+ + IK G+ S LS ++Y G +DA + ++ ++
Sbjct: 441 AELTLLEFGQQVHGNYIK-----SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRD 495
Query: 564 VIKTPGCSWT 573
+I +WT
Sbjct: 496 LI-----TWT 500
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 165/382 (43%), Gaps = 46/382 (12%)
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
N ++ SG + AR++FD MP+R+ + TMI YS S + A KLF K+ +
Sbjct: 32 NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
S+NA+I+ Y ++ EA LF M + P++ TL SV+ C+ L L I
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSD--GIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGINGRAS 414
H G LD ++ L+ +YA+ I +A LF + +++ V +++M+ G+ NG A
Sbjct: 150 HTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAF 209
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMV 474
AI+ F + E N T+ +LTA G + +G + ++
Sbjct: 210 KAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALI 269
Query: 475 DLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC--------------RLH-------- 512
D+ + ++ A L+ M + W ++++ C R+H
Sbjct: 270 DMYAKCREMESARALLEGMEVD-DVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDD 328
Query: 513 ------------NNVELGEIAVQHCIKLESDTVGYY---SLLSSIYANLGRWDDAKKLRM 557
+ E+ + HC+ +++ Y + L +YA G D A K+
Sbjct: 329 FTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFE 388
Query: 558 GVKGKNVIKTPGCSWTQRVSLN 579
G+ K+VI SWT V+ N
Sbjct: 389 GMIEKDVI-----SWTALVTGN 405
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 248/537 (46%), Gaps = 89/537 (16%)
Query: 120 KLGGVSIHGQ-VHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
+LG V +H + V L ++ L+++YSK+ +AR V +NVVSW SL+S
Sbjct: 23 RLGRV-VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLIS 81
Query: 179 GYLKAGDLDEAQHLFDK--------------------------IPGK------------- 199
G + G A F + + GK
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRIL 141
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVF---- 255
DV S Y K D A LF ++PERNL +WN I+ + G A E F
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 256 --DAMPKRNSVSLIT-----------------------------------MIAGYSKSGD 278
D P NS++ +I Y K
Sbjct: 202 RIDGHP--NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQ 259
Query: 279 VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
+ S+ +F +M K+ +S+ +++A Y QN + ++A L Y+ + V ++SV+
Sbjct: 260 IRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL--YLRSRKDIVETSDFMISSVL 317
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV 398
SAC+ + LE R I +H V + +ALVD+Y K G I+ + + F + +++LV
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLV 377
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGP--NLVTYTGILTAYNHAGLVEEGYWCFN 456
+++I G+ G+ A+ LFE+M GP N +T+ +L+A + AG VE G F+
Sbjct: 378 TRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD 437
Query: 457 SMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNV 515
SM+ G+ P +HY +VD+LGRAG ++ AYE I MP QP VWGAL ACR+H
Sbjct: 438 SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKP 497
Query: 516 ELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+LG +A ++ KL+ G + LLS+ +A GRW +A +R +KG + K G SW
Sbjct: 498 QLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSW 554
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/604 (25%), Positives = 278/604 (46%), Gaps = 89/604 (14%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
+ + + + S+ +I ++Q G + +A+ L+++ + L + AL C
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
D G +HG V V G V++ L+D+YSK G + A +FD E++ VSWNS
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGK------------------------------------ 199
L+SGY++ G +E +L K+
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 200 ------DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSIL---- 249
D++ +++ Y+K G++ +A LF MP +N+ ++N MI+G++ I
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 250 -SAREVFDAMPKR------NSVSLI---------------------------------TM 269
A ++F M +R ++ S++ +
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 270 IAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
I Y+ G + + F ++D+ S+ +MI C+ QN + + A +LF + I P
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI--RP 457
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
++ T++ ++SAC+ L I+ + G+ + T+ + +YAKSG++ A ++F
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
++ D+ YSAMI +G A++A+ +FE M I PN + G+L A H GLV
Sbjct: 518 IEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVT 577
Query: 450 EGYWCFNSMK-DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
+G F MK D + P H+ +VDLLGR G L +A LI++ Q + W ALL +
Sbjct: 578 QGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Query: 509 CRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTP 568
CR++ + +G+ + ++LE + G Y LL +IY + G A+++R ++ + V K P
Sbjct: 638 CRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEP 697
Query: 569 GCSW 572
SW
Sbjct: 698 ALSW 701
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 227/534 (42%), Gaps = 132/534 (24%)
Query: 148 LYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF----------DKIP 197
+Y K ++G AR++FD M E+N++S+NSL+SGY + G ++A LF DK
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 198 -----------------------------GKDVISWNSMISGYSKAGNMDQANSLFQKMP 228
+ V N +I YSK G +DQA SLF +
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 229 ERNLASWNTMIAGYIDSGSILSAREVFDAMPK--RNSVSLITMIAG-------------- 272
ER+ SWN++I+GY+ G +A E + + K R+ ++L T G
Sbjct: 211 ERDQVSWNSLISGYVRVG---AAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGF 267
Query: 273 -----------------------------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIAC 303
Y+K+G + A KLF M K++++YNAMI+
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 304 YAQ-----NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
+ Q + EA +LF M + + P T + V+ ACS LE+ R I + I
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRR--GLEPSPSTFSVVLKACSAAKTLEYGRQIHALIC 385
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIK 418
D+ + +AL++LYA GS + + F K+D+ ++++MI N + A
Sbjct: 386 KNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFD 445
Query: 419 LFEQMLGENIGPNLVTYTGILTA-YNHAGL----------VEEGYWCFNSMK-------- 459
LF Q+ +I P T + +++A + A L ++ G F S+K
Sbjct: 446 LFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYA 505
Query: 460 DNGLVPLVDH------------YGIMVDLLGRAGWLDEAYELIINMPT---QPNADVWGA 504
+G +PL + Y M+ L + G +EA + +M T +PN +
Sbjct: 506 KSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLG 565
Query: 505 LLLACRLHNNVELGEIAVQHCIKLE---SDTVGYYSLLSSIYANLGRWDDAKKL 555
+L+AC H + + C+K + + +++ L + GR DA+ L
Sbjct: 566 VLIAC-CHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENL 618
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 4 TKLTTLMKKCS---TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPI 60
+ + ++K CS TL + +QIHA I N E FI L+ ++ +
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDE--FIGSALI-ELYALMGSTEDGMQC 415
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ D SW +I Q Q A L+ Q+ + P + +S + +CA
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G I G G D V+T+ + +Y+K G++ A +VF E+ +V ++++++S
Sbjct: 476 SSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSL 535
Query: 181 LKAGDLDEAQHLFDKI 196
+ G +EA ++F+ +
Sbjct: 536 AQHGSANEALNIFESM 551
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/585 (27%), Positives = 279/585 (47%), Gaps = 58/585 (9%)
Query: 6 LTTLMKKC---STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
+ L+++C +++ K I AH+L +G P I L D + Y +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGF----PAEISGSKLVDASLKCGDIDYARQVFD 123
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
+ +W +I + + + EAV +Y M + P + +SS K+ + + +
Sbjct: 124 GMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 123 GVSIHGQVHVLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
HG +LG + V+V +AL+D+Y +
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMY-------------------------------V 212
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM-PERNLASWNTMIA 240
K G EA+ + D++ KDV+ ++I GYS+ G +A FQ M E+ + T +
Sbjct: 213 KFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 241 GYIDSGSI-----------LSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQM 289
I G++ L + F++ + SL+TM Y + VD + ++F +
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALA-SQTSLLTM---YLRCSLVDDSLRVFKCI 328
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
+ + +S+ ++I+ QN + + AL F M++ I P+ TL+S + CS L E
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIK--PNSFTLSSALRGCSNLAMFEE 386
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
R I + +G D + + L+DLY K G D A +F L + D+++ + MIY +
Sbjct: 387 GRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQ 446
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDH 469
NG +A+ LFE+M+ + PN VT +L A N++ LVEEG F+S + + ++ DH
Sbjct: 447 NGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDH 506
Query: 470 YGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLE 529
Y MVDLLGRAG L+EA E++ P+ +W LL AC++H VE+ E + +++E
Sbjct: 507 YACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIE 565
Query: 530 SDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G L+S++YA+ G+W+ +++ +K + K P SW +
Sbjct: 566 PGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVE 610
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/512 (21%), Positives = 212/512 (41%), Gaps = 88/512 (17%)
Query: 103 TSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVF 162
T+H S L+ C + G +I + G+ + + L+D K GD+ AR+VF
Sbjct: 64 TTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVF 122
Query: 163 DEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVI----SWNSMISGYS-----K 213
D M+E+++V+WNSL++ +K EA ++ + +V+ + +S+ +S K
Sbjct: 123 DGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK 182
Query: 214 AGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGY 273
++ + N+ + ++ Y+ G A+ V D + +++ V + +I GY
Sbjct: 183 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
S+ G+ EA++ F ML + V P++ T
Sbjct: 243 SQKGE-------------------------------DTEAVKAFQSMLVEK--VQPNEYT 269
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
ASV+ +C L D+ + + I + G T+L+ +Y + +D + +F +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
+ V+++++I G NGR A+ F +M+ ++I PN T + L ++ + EEG
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 454 CFNSMKDNGLVPLVDHYG--IMVDLLGRAGWLDEA------------------------- 486
+ G D Y ++DL G+ G D A
Sbjct: 390 IHGIVTKYGFDR--DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQN 447
Query: 487 ---------YELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTV---- 533
+E +IN+ QPN ++LLAC NN L E + D +
Sbjct: 448 GFGREALDLFERMINLGLQPNDVTVLSVLLAC---NNSRLVEEGCELFDSFRKDKIMLTN 504
Query: 534 GYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI 565
+Y+ + + GR ++A+ L V +++
Sbjct: 505 DHYACMVDLLGRAGRLEEAEMLTTEVINPDLV 536
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 255/503 (50%), Gaps = 27/503 (5%)
Query: 75 VIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLG 134
+I ++++G +AV L+ M G P S ++ LKS + G IH V G
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 135 YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFD 194
+ ++T ++++Y K G + A++VFD+MA K V+ L+ GY +AG +A LF
Sbjct: 215 LCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274
Query: 195 KIPGKDVISWNSMI-SGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSARE 253
+ + V W+S + S KA + E NL + S E
Sbjct: 275 DLVTEGV-EWDSFVFSVVLKAC---------ASLEELNLGKQIHACVAKLGLES-----E 319
Query: 254 VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEA 313
V P ++ Y K +SA + F ++ E + +S++A+I+ Y Q S+ +EA
Sbjct: 320 VSVGTP---------LVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 314 LELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALV 373
++ F + ++ + T S+ ACS L D + + ++ + +AL+
Sbjct: 371 VKTFKSLRSKNASI-LNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALI 429
Query: 374 DLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLV 433
+Y+K G +D A E+F + D+VA++A I G G AS+A++LFE+M+ + PN V
Sbjct: 430 TMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 489
Query: 434 TYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIIN 492
T+ +LTA +HAGLVE+G C ++M + + P +DHY M+D+ R+G LDEA + + N
Sbjct: 490 TFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKN 549
Query: 493 MPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDA 552
MP +P+A W L C H N+ELGEIA + +L+ + Y L ++Y G+W++A
Sbjct: 550 MPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEA 609
Query: 553 KKLRMGVKGKNVIKTPGCSWTQR 575
++ + + + K CSW Q
Sbjct: 610 AEMMKLMNERMLKKELSCSWIQE 632
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/530 (22%), Positives = 217/530 (40%), Gaps = 94/530 (17%)
Query: 79 FSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTC 138
S+ + EA +M + G+ +S++ ++C ++ G +H ++ + +
Sbjct: 58 LSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPS 117
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF----- 193
V +Q +L +Y + + A K+FDEM+E N VS +++S Y + G LD+A LF
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLA 177
Query: 194 --DKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG----YIDSGS 247
DK P + +++ +D + + L S ++ G Y+ G
Sbjct: 178 SGDKPPSS---MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 248 ILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQN 307
++ A+ VFD M + V+ ++ GY+++G A KLF DL++
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF-----VDLVT----------- 278
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
E +E D + V+ AC+ L +L + I + + G+ +
Sbjct: 279 ----EGVEW-------------DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN 427
+ T LVD Y K S + A F +R+ + V++SA+I G+ + +A+K F+ + +N
Sbjct: 322 VGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 428 IGP-NLVTYTGI-----------------------------------LTAYNHAGLVEEG 451
N TYT I +T Y+ G +++
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 452 YWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRL 511
F SM + +V G A +E +++ +PN+ + A+L AC
Sbjct: 442 NEVFESMDNPDIVAWTAFISGHA-YYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSH 500
Query: 512 HNNVELGEIAVQHCIKLE------SDTVGYYSLLSSIYANLGRWDDAKKL 555
VE G +HC+ + T+ +Y + IYA G D+A K
Sbjct: 501 AGLVEQG----KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKF 546
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 193/308 (62%), Gaps = 3/308 (0%)
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV 327
+++ Y SG+V++A+K+F++M E++++S+ AMI+ +AQ + L+L++ M K +
Sbjct: 160 SLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD- 218
Query: 328 HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
P+ T +++SAC+ G L R + G+ H++ +L+ +Y K G + A+
Sbjct: 219 -PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 388 LFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAG 446
+F +D+V++++MI G+ +G A AI+LFE M+ ++ P+ +TY G+L++ HAG
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 447 LVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
LV+EG FN M ++GL P ++HY +VDLLGR G L EA ELI NMP +PN+ +WG+LL
Sbjct: 338 LVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 507 LACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIK 566
+CR+H +V G A + + LE D + L+++YA++G W +A +R +K K +
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 567 TPGCSWTQ 574
PGCSW +
Sbjct: 458 NPGCSWIE 465
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 177/379 (46%), Gaps = 44/379 (11%)
Query: 95 MQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGD 154
++R G ++ +SSA++SC +D G H G+ + VY+ ++L+ LY G+
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 155 VGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISG 210
V A KVF+EM E+NVVSW +++SG+ + +D L+ K+ + ++ +++S
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 211 YSKAGNMDQANSLFQKMPERNLASW----NTMIAGYIDSGSILSAREVFDAMPKRNSVSL 266
+ +G + Q S+ + L S+ N++I+ Y G + A +FD ++ VS
Sbjct: 231 CTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSW 290
Query: 267 ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
+MIAGY++ G +A+ELF M+ P+
Sbjct: 291 NSMIAGYAQHG-------------------------------LAMQAIELFELMM-PKSG 318
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
PD +T V+S+C G ++ R + + + G+ + + + LVDL + G + +A
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEAL 378
Query: 387 ELFHGL-RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNL-VTYTGILTAYNH 444
EL + K + V + ++++ ++G I+ E+ L + P+ T+ + Y
Sbjct: 379 ELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL--MLEPDCAATHVQLANLYAS 436
Query: 445 AGLVEEGYWCFNSMKDNGL 463
G +E MKD GL
Sbjct: 437 VGYWKEAATVRKLMKDKGL 455
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 13/286 (4%)
Query: 57 VHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCAR 116
+ + + + SW +I F+Q+ + + LY +M++ P + ++ L +C
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
G S+H Q +G + +++ +L+ +Y K GD+ A ++FD+ + K+VVSWNS+
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSM 293
Query: 177 LSGYLKAGDLDEAQHLFDKIPGK-----DVISWNSMISGYSKAGNMDQANSLFQKMPERN 231
++GY + G +A LF+ + K D I++ ++S AG + + F M E
Sbjct: 294 IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHG 353
Query: 232 LASWNTMIAGYID----SGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSAHKLF 286
L + +D G + A E+ + MP K NSV +++ GDV + +
Sbjct: 354 LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAA 413
Query: 287 DQ--MDEKDLLSYNAMIA-CYAQNSKPKEALELFNYMLKPEINVHP 329
++ M E D + + +A YA KEA + M + +P
Sbjct: 414 EERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNP 459
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
D L+S + +C D G + D +L ++LV LY SG ++ AY++F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
+ +R++V+++AMI GF R +KL+ +M PN T+T +L+A +G +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
+G GL + ++ + + G L +A+ I + + + W +++
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR-IFDQFSNKDVVSWNSMIAGY 297
Query: 510 RLH----NNVELGEIAVQHCIKLESDTVGYYSLLSS 541
H +EL E+ + + D + Y +LSS
Sbjct: 298 AQHGLAMQAIELFELMMPKS-GTKPDAITYLGVLSS 332
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 246/442 (55%), Gaps = 15/442 (3%)
Query: 142 QTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHL------FDK 195
QT S GDV A K ++++ WN ++ G+ + + +++ + F
Sbjct: 45 QTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGL 104
Query: 196 IPGKDVISWNSMISGYSKAGNMDQANSL----FQKMPERNLASWNTMIAGYIDSGSILSA 251
+P D +++ ++ S+ N SL + E +L NT+I Y SA
Sbjct: 105 LP--DHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 252 REVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPK 311
R++FD MP +N V+ +++ Y+KSGDV SA +FD+M E+D++++++MI Y + +
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATA 371
+ALE+F+ M++ + +++T+ SVI AC+ LG L + + +I D + L L T+
Sbjct: 223 KALEIFDQMMRMG-SSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 372 LVDLYAKSGSIDKAYELFH--GLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG 429
L+D+YAK GSI A+ +F+ +++ D + ++A+I G +G ++++LF +M I
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 430 PNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYEL 489
P+ +T+ +L A +H GLV+E + F S+K++G P +HY MVD+L RAG + +A++
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 490 IINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRW 549
I MP +P + GALL C H N+EL E + I+L+ G Y L+++YA ++
Sbjct: 402 ISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 461
Query: 550 DDAKKLRMGVKGKNVIKTPGCS 571
A+ +R ++ K V K G S
Sbjct: 462 RAARSMREAMEKKGVKKIAGHS 483
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 208/395 (52%), Gaps = 18/395 (4%)
Query: 7 TTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHN 66
+ L +C +++ +IH ++ GL EP F+ L + + Y + L L +
Sbjct: 12 SILRHQCKSMSELYKIHTLLITLGLSEEEP-FVSQTLSFSALSSSGDVDYAYKFLSKLSD 70
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P ++ W VIR FS +++S+Y+QM R GL P +KS +R+ ++ G S+
Sbjct: 71 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 130
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
H V G + +++ L+ +Y D +ARK+FDEM KN+V+WNS+L Y K+GD+
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 187 DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN--TMIA---- 240
A+ +FD++ +DV++W+SMI GY K G ++A +F +M + N TM++
Sbjct: 191 VSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICA 250
Query: 241 ----GYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQ--MDEKDL 294
G ++ G + R + D + ++I Y+K G + A +F + + E D
Sbjct: 251 CAHLGALNRGKTVH-RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDA 309
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWRWI 353
L +NA+I A + +E+L+LF+ M + +I+ PD++T +++ACS G + E W +
Sbjct: 310 LMWNAIIGGLASHGFIRESLQLFHKMRESKID--PDEITFLCLLAACSHGGLVKEAWHFF 367
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
+S +H A +VD+ +++G + A++
Sbjct: 368 KSLKESGAEPKSEHYA-CMVDVLSRAGLVKDAHDF 401
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 224 bits (570), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 268/527 (50%), Gaps = 49/527 (9%)
Query: 5 KLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNL 64
KL ++ C +IH +++ GL + + V + + Y I ++
Sbjct: 30 KLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIR----YASSIFEHV 85
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
N + F + +IR +S + A S++ Q++ GL + + LKSC+R
Sbjct: 86 SNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSR-------- 137
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
+ CV + L + + G + VF ++ N+L+ Y G
Sbjct: 138 -----------ELCVSIGEGLHGIALRSGFM-----VFTDL-------RNALIHFYCVCG 174
Query: 185 DLDEAQHLFDKIPGK-DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMI 239
+ +A+ +FD++P D ++++++++GY + A LF+ M + N+++ + +
Sbjct: 175 KISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFL 234
Query: 240 AGYIDSGSILSAREVFDAMPKRN---SVSLITMIAG-YSKSGDVDSAHKLFDQMDEKDLL 295
+ D G + A K + LIT + G Y K+G + SA ++FD KD++
Sbjct: 235 SAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVV 294
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
++N MI YA+ +E + L M K E + P+ T ++S+C+ R +
Sbjct: 295 TWNCMIDQYAKTGLLEECVWLLRQM-KYE-KMKPNSSTFVGLLSSCAYSEAAFVGRTVAD 352
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
+ + + LD L TALVD+YAK G ++KA E+F+ ++ +D+ +++AMI G+G +G A +
Sbjct: 353 LLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLARE 412
Query: 416 AIKLFEQMLGEN--IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGI 472
A+ LF +M EN + PN +T+ +L A +H GLV EG CF M + P V+HYG
Sbjct: 413 AVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGC 472
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGE 519
+VDLLGRAG L+EAYELI N+P ++ W ALL ACR++ N +LGE
Sbjct: 473 VVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGE 519
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 221/408 (54%), Gaps = 28/408 (6%)
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
L A + +IP V +N++IS N Q + F + ++ L+S + + +
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFS-LYDQILSSRSNFVRPNEFT 114
Query: 246 GSILSAREVFDAMPKRNSVSL------------------ITMIAGYSKSGDVDSAHKLFD 287
L FDA R+ +L ++ Y+ G + A LF+
Sbjct: 115 YPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFE 174
Query: 288 QMDEKDLLSYNAMIACYAQNSK---PKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
++ E DL ++N ++A YA + + +E L LF M V P++++L ++I +C+ L
Sbjct: 175 RIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM-----QVRPNELSLVALIKSCANL 229
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
G+ W ++ + L+ + T+L+DLY+K G + A ++F + +RD+ Y+AMI
Sbjct: 230 GEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMI 289
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGL 463
G ++G + I+L++ ++ + + P+ T+ ++A +H+GLV+EG FNSMK G+
Sbjct: 290 RGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGI 349
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
P V+HYG +VDLLGR+G L+EA E I MP +PNA +W + L + + H + E GEIA++
Sbjct: 350 EPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALK 409
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
H + LE + G Y LLS+IYA + RW D +K R +K V K+PG S
Sbjct: 410 HLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 170/404 (42%), Gaps = 72/404 (17%)
Query: 5 KLTTLMKKCSTLNHAKQIHAHILINGL-HHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
+ L+ KC +L + KQIHA I+ GL HH PL L +++ LS Y IL
Sbjct: 11 RCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPL----SKLLHLSSTVCLS-YALSILRQ 65
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIE---AVSLYVQM---QRMGLCPTSHAISSALKSCA-R 116
+ NP F + +I + A SLY Q+ + + P S K+
Sbjct: 66 IPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFD 125
Query: 117 IQDKLGGVSIHGQVHVLGYDTCV----YVQTALLDLYSKMGDVGTARKVFDEMAEKNVVS 172
Q G ++H HVL + V +VQ AL+ Y+ G + AR +F+ + E ++ +
Sbjct: 126 AQWHRHGRALHA--HVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLAT 183
Query: 173 WNSLLSGYLKAGDLD---EAQHLFDKI---PG---------------------------- 198
WN+LL+ Y + ++D E LF ++ P
Sbjct: 184 WNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVL 243
Query: 199 KDVISWN-----SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSARE 253
K+ ++ N S+I YSK G + A +F +M +R+++ +N MI G G E
Sbjct: 244 KNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIE 303
Query: 254 VFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD-----EKDLLSYNAMIACY 304
++ ++ + +S + + I+ S SG VD ++F+ M E + Y ++
Sbjct: 304 LYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLL 363
Query: 305 AQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
++ + +EA E M V P+ S + + GD E
Sbjct: 364 GRSGRLEEAEECIKKM-----PVKPNATLWRSFLGSSQTHGDFE 402
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 220/394 (55%), Gaps = 17/394 (4%)
Query: 192 LFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSA 251
LF +P D +NS+I SK + +++M N++ N I S + LSA
Sbjct: 63 LFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSA 122
Query: 252 REVFDAMPKRNSVS--------LITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIAC 303
+ + VS ++ YSK GD++ A ++FD+M EK ++++N++++
Sbjct: 123 LRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSG 182
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
+ QN EA+++F M E PD T S++SAC+Q G + W+ +I G+
Sbjct: 183 FEQNGLADEAIQVFYQM--RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLD 240
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
L+ L TAL++LY++ G + KA E+F +++ ++ A++AMI +G +G A++LF +M
Sbjct: 241 LNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM 300
Query: 424 LGENIGP--NLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRA 480
++ GP N VT+ +L+A HAGLVEEG + M K L+P V+H+ MVD+LGRA
Sbjct: 301 -EDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 481 GWLDEAYELIINMPTQPNAD---VWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYS 537
G+LDEAY+ I + A +W A+L AC++H N +LG + I LE D G++
Sbjct: 360 GFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHV 419
Query: 538 LLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+LS+IYA G+ D+ +R G+ N+ K G S
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYS 453
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 180/382 (47%), Gaps = 44/382 (11%)
Query: 20 KQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFF 79
+Q+HAH+++ G L I L + + ++ Y H + ++ PD F + VI+
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITL--ACSARAIA-YTHLLFLSVPLPDDFLFNSVIKST 82
Query: 80 SQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCV 139
S+ + V+ Y +M + P+++ +S +KSCA + G +H V G+
Sbjct: 83 SKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDT 142
Query: 140 YVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK 199
YVQ AL+ YSK GD+ AR+VFD M EK++V+WNSL+SG+ + G DEA +F ++
Sbjct: 143 YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRES 202
Query: 200 ----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSA 251
D ++ S++S ++ G + + + Q + N+ +I Y G + A
Sbjct: 203 GFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKA 262
Query: 252 REVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPK 311
REVFD M + N + MI+ Y G A +LF++M++
Sbjct: 263 REVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED-------------------- 302
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN-DFGVVLDDHLAT 370
+ P+ +T +V+SAC+ G +E R + + + ++
Sbjct: 303 ------------DCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV 350
Query: 371 ALVDLYAKSGSIDKAYELFHGL 392
+VD+ ++G +D+AY+ H L
Sbjct: 351 CMVDMLGRAGFLDEAYKFIHQL 372
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 128/271 (47%), Gaps = 7/271 (2%)
Query: 262 NSVSLITMIAGYSKSGD-VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM 320
S SL+T + + S + H LF + D +N++I ++ P + + M
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRM 98
Query: 321 LKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSG 380
L NV P T SVI +C+ L L + + H G LD ++ ALV Y+K G
Sbjct: 99 LSS--NVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG 156
Query: 381 SIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
++ A ++F + ++ +VA+++++ GF NG A +AI++F QM P+ T+ +L+
Sbjct: 157 DMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLS 216
Query: 441 AYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNAD 500
A G V G W + GL V +++L R G + +A E+ M + N
Sbjct: 217 ACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVA 275
Query: 501 VWGALLLACRLHNNVELGEIAVQHCIKLESD 531
W A++ A H G+ AV+ K+E D
Sbjct: 276 AWTAMISAYGTHG---YGQQAVELFNKMEDD 303
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 243/444 (54%), Gaps = 15/444 (3%)
Query: 144 ALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK 199
AL++ ++ + ++V+ M E N +L ++K G + +A+ LFD+IP +
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPER 187
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVF 255
++ S+ S+ISG+ GN +A LF+ M E ++ M+ GSI +++
Sbjct: 188 NLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLH 247
Query: 256 DAMPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPK 311
K N+ +I YSK GD++ A F+ M EK +++N +IA YA + +
Sbjct: 248 VCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSE 307
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATA 371
EAL L M +++ D+ TL+ +I ++L LE + + + G + TA
Sbjct: 308 EALCLLYDMRDSGVSI--DQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTA 365
Query: 372 LVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPN 431
LVD Y+K G +D A +F L ++++++++A++ G+ +GR +DA+KLFE+M+ N+ PN
Sbjct: 366 LVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPN 425
Query: 432 LVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLDEAYELI 490
VT+ +L+A ++GL E+G+ F SM + +G+ P HY M++LLGR G LDEA I
Sbjct: 426 HVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFI 485
Query: 491 INMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWD 550
P + ++W ALL ACR+ N+ELG + + + + +G Y ++ ++Y ++G+
Sbjct: 486 RRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTA 545
Query: 551 DAKKLRMGVKGKNVIKTPGCSWTQ 574
+A + ++ K + P C+W +
Sbjct: 546 EAAGVLETLESKGLSMMPACTWVE 569
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 199/462 (43%), Gaps = 86/462 (18%)
Query: 84 QFIEAVSLYVQMQ-RMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQ 142
+F EA L+ ++ R + +++C R++ ++G + G++ Y+
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 143 TALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI------ 196
+L ++ K G + AR++FDE+ E+N+ S+ S++SG++ G+ EA LF +
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 197 --------------------PGKDV--------ISWNSMISG-----YSKAGNMDQANSL 223
GK + + N+ +S YSK G+++ A
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 224 FQKMPERNLASWNTMIAGYI----------------DSG--------SIL---SAREVFD 256
F+ MPE+ +WN +IAGY DSG SI+ S +
Sbjct: 282 FECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKL 341
Query: 257 AMPKRNSVSLI------------TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACY 304
+ K+ SLI ++ YSK G VD+A +FD++ K+++S+NA++ Y
Sbjct: 342 ELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 305 AQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH-WRWIESHINDFGVV 363
A + + +A++LF M+ NV P+ +T +V+SAC+ G E W S G+
Sbjct: 402 ANHGRGTDAVKLFEKMIAA--NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIK 459
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV-AYSAMIYGFGINGRASDAIKLFEQ 422
+++L + G +D+A + V ++A++ + + E+
Sbjct: 460 PRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEK 519
Query: 423 MLGENIGPN-LVTYTGILTAYNHAGLVEEGYWCFNSMKDNGL 463
+ G +GP L Y + YN G E +++ GL
Sbjct: 520 LYG--MGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL 559
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 154/577 (26%), Positives = 273/577 (47%), Gaps = 72/577 (12%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRM-GLCPTSHAISSALKSCARIQ 118
+ L D S ++ F+ G F EA + QMQ + + P + S C +
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 119 DKLGGVSIHG-QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G ++HG V + + V +++D+Y K G A +F +++VSWNS++
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMI 467
Query: 178 SGYLKAGDLDEAQHLFDKIPGK----------------DVISWNSMISGYS------KAG 215
S + + G +A++LF ++ + S +S+I G S K G
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG 527
Query: 216 NMDQANSLFQKMPE-RNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVS--LITMIAG 272
++ A + M E R+L SWN++I+G SG L + F AM + + LIT++
Sbjct: 528 DLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGT 587
Query: 273 YSKSG--------------------------------------DVDSAHKLFDQMDEKDL 294
S SG D++SA K+F + + +L
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNL 647
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
S+N +I+ +QN +E +LF + + P+++T ++SA +QLG +
Sbjct: 648 CSWNCVISALSQNKAGREVFQLFR-----NLKLEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRAS 414
H+ G + ++ ALVD+Y+ G ++ ++F + A++++I G +G
Sbjct: 703 CHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGE 762
Query: 415 DAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGI 472
A++LF+++ + + PN ++ +L+A +H+G ++EG + M++ G+ P+ +H
Sbjct: 763 KAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVW 822
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDT 532
+VD+LGRAG L EAYE I + A VWGALL AC H + +LG+ + ++E D
Sbjct: 823 IVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDN 882
Query: 533 VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
YY L++ Y LG W++A +LR V+ + K PG
Sbjct: 883 ASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPG 919
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 168/358 (46%), Gaps = 25/358 (6%)
Query: 168 KNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM 227
+++ + + LL+ Y + G+L + LFD++ KDVI WNSMI+ ++ G A LF +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 228 PERN---------LASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGD 278
+ LA+ S+L + + +S+ ++ Y+K +
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL-CNALMNLYAKGEN 238
Query: 279 VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
+ SA +F M+ +D++S+N ++ N P+++L+ F M D +T + VI
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS--GQEADTVTFSCVI 296
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLDDHLAT--ALVDLYAKSGSIDKAYELFHGLRKRD 396
SACS + +L + + G + H++ +++ +Y+K G + A +F L RD
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 397 LVAYSAMIYGFGINGRASDAIKLFEQMLG-ENIGPNLVTYTGILT-----AYNHAGLVEE 450
+++ +A++ GF NG +A + QM + I P++ T I + +++ G
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 451 GYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
GY M+ L + ++D+ G+ G +A EL+ T + W +++ A
Sbjct: 417 GYTVRMEMQSRAL----EVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWNSMISA 469
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 160/371 (43%), Gaps = 90/371 (24%)
Query: 141 VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK- 199
+ LL Y + G++ ++ +FDE+ EK+V+ WNS+++ + G A LF ++ K
Sbjct: 124 TSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG 183
Query: 200 --------------------------------------DVISWNSMISGYSKAGNMDQAN 221
D N++++ Y+K N+ A
Sbjct: 184 NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAE 243
Query: 222 SLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----------------NSVS 265
+F M R++ SWNT++ + +G + + F +M +S+
Sbjct: 244 CVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIE 303
Query: 266 LITM-------------------------IAGYSKSGDVDSAHKLFDQMDEKDLLSYNAM 300
+T+ I+ YSK GD ++A +F+++ +D++S NA+
Sbjct: 304 ELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAI 363
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
+ +A N +EA + N M + + PD T+ S+ S C GDL R + ++ +
Sbjct: 364 LNGFAANGMFEEAFGILNQMQSVD-KIQPDIATVVSITSIC---GDLSFSREGRA-VHGY 418
Query: 361 GVVLDDH-----LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
V ++ + +++D+Y K G +A LF RDLV++++MI F NG
Sbjct: 419 TVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHK 478
Query: 416 AIKLFEQMLGE 426
A LF++++ E
Sbjct: 479 AKNLFKEVVSE 489
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 121/580 (20%), Positives = 232/580 (40%), Gaps = 133/580 (22%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMG---------LCPTSHAISSA 110
+ L D W +I +Q G++I AV L+++M G L ++ +
Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHL 203
Query: 111 LKSCARIQDKLGGVSIHGQVHVLGYDTCVY----VQTALLDLYSKMGDVGTARKVFDEMA 166
+ C+ +H L +T + + AL++LY+K ++ +A VF M
Sbjct: 204 SRKCS-------------MLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME 250
Query: 167 EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISW------------------ 204
+++VSWN++++ L G ++ F + G D +++
Sbjct: 251 HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGES 310
Query: 205 -------------------NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
NS+IS YSK G+ + A ++F+++ R++ S N ++ G+ +
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN 370
Query: 246 GSILSAREVFDAM-------PKRNSVSLITMIAG-------------------------- 272
G A + + M P +V IT I G
Sbjct: 371 GMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE 430
Query: 273 --------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
Y K G A LF +DL+S+N+MI+ ++QN +A LF ++
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEY 490
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
T+ +++++C L + + + G L +A + L S
Sbjct: 491 SCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG-----DLTSAFLRLETMS----- 540
Query: 385 AYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE-NIGPNLVTYTGILTAYN 443
RDL +++++I G +G ++++ F+ M E I +L+T G ++A
Sbjct: 541 --------ETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASG 592
Query: 444 HAGLVEEGYWCFNSMKDNGLVPL-VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVW 502
+ GLV +G CF+ + L L ++ + GR ++ A + + + + PN W
Sbjct: 593 NLGLVLQGR-CFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK-VFGLISDPNLCSW 650
Query: 503 GALLLACRLHNNVELGEI-AVQHCIKLESDTVGYYSLLSS 541
++ A L N E+ + +KLE + + + LLS+
Sbjct: 651 NCVISA--LSQNKAGREVFQLFRNLKLEPNEITFVGLLSA 688
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/543 (28%), Positives = 261/543 (48%), Gaps = 50/543 (9%)
Query: 78 FFSQKGQFIEAVSLYVQMQRM---GLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLG 134
F G EA+ ++ +M R + +++ +K A++ + G +HG + G
Sbjct: 96 FAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTG 155
Query: 135 YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV--VSWNSLLSGYLKAGDLDEAQHL 192
D + ++L+ +YSK G +F+ + V V+ N++++ Y + GD+D+A +
Sbjct: 156 NDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSV 215
Query: 193 FDKIPG-KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI-----DSG 246
F + P D ISWN++I+GY++ G ++A + M E L W+ G +
Sbjct: 216 FWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGL-KWDEHSFGAVLNVLSSLK 274
Query: 247 SILSAREVFDAMPKRNSVS-----------------------------------LITMIA 271
S+ +EV + K S S +MI
Sbjct: 275 SLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIV 334
Query: 272 GYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDK 331
GYS G + A +LFD + EK+L+ + AM Y +P LEL + E N PD
Sbjct: 335 GYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNT-PDS 393
Query: 332 MTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
+ + SV+ ACS +E + I H G+++D L TA VD+Y+K G+++ A +F
Sbjct: 394 LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS 453
Query: 392 LRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
+RD V Y+AMI G +G + + + FE M P+ +T+ +L+A H GLV EG
Sbjct: 454 SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEG 513
Query: 452 YWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINM-PTQPNADVWGALLLAC 509
F SM + + P HY M+DL G+A LD+A EL+ + + +A + GA L AC
Sbjct: 514 EKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNAC 573
Query: 510 RLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
+ N EL + + + +E Y +++ YA+ GRWD+ +++R ++GK + G
Sbjct: 574 SWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSG 633
Query: 570 CSW 572
CSW
Sbjct: 634 CSW 636
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 193/409 (47%), Gaps = 34/409 (8%)
Query: 65 HNP---DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
NP D+ SW +I ++Q G EA+ + V M+ GL H+ + L + ++
Sbjct: 218 RNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLK 277
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G +H +V G + +V + ++D+Y K G++ A N+ S +S++ GY
Sbjct: 278 IGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYS 337
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP-----ERNLASWN 236
G + EA+ LFD + K+++ W +M GY N+ Q +S+ + E N
Sbjct: 338 SQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL---NLRQPDSVLELARAFIANETNTPDSL 394
Query: 237 TMIA--------GYIDSGSILSAREVFDA--MPKRNSVSLITMIAGYSKSGDVDSAHKLF 286
M++ Y++ G + + M K+ + + M YSK G+V+ A ++F
Sbjct: 395 VMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDM---YSKCGNVEYAERIF 451
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG- 345
D E+D + YNAMIA A + ++ + F M E PD++T +++SAC G
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM--TEGGFKPDEITFMALLSACRHRGL 509
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
LE ++ +S I + + + T ++DLY K+ +DKA EL G+ D V A+I
Sbjct: 510 VLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGI---DQVEKDAVIL 566
Query: 406 GFGING----RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEE 450
G +N + ++ +K E+ L G N Y I AY +G +E
Sbjct: 567 GAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDE 615
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 170/347 (48%), Gaps = 57/347 (16%)
Query: 145 LLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP-GKDVIS 203
L++LYSK G + AR VFDEM E+NV SWN++++ Y+K ++ EA+ LF+ +D+I+
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 204 WNSMISGYSKA-GNMDQANSLFQKMPERNLAS-W-------------------------- 235
+N+++SG++K G +A +F +M + W
Sbjct: 89 YNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH 148
Query: 236 ---------------NTMIAGYIDSGSILSAREVFDA--MPKRNSVSLITMIAGYSKSGD 278
+++I Y G +F+ + +SV+ MIA Y + GD
Sbjct: 149 GVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGD 208
Query: 279 VDSAHKLFDQMDE-KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
+D A +F + E D +S+N +IA YAQN +EAL++ M E + D+ + +V
Sbjct: 209 IDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM--EENGLKWDEHSFGAV 266
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE--LFHGLRKR 395
++ S L L+ + + + + G + +++ +VD+Y K G++ A L +G
Sbjct: 267 LNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGF--G 324
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAY 442
+L + S+MI G+ G+ +A +LF+ L E NLV +T + Y
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDS-LSE---KNLVVWTAMFLGY 367
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 136/283 (48%), Gaps = 43/283 (15%)
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDA-MPK 260
+S N +++ YSK+G + +A ++F +M ERN+ SWN +IA Y+ ++ ARE+F++ +
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 261 RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM 320
R+ ++ T+++G++K+ +S EA+E+F M
Sbjct: 84 RDLITYNTLLSGFAKTDGCES------------------------------EAIEMFGEM 113
Query: 321 LKPEI-NVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
+ E ++ D T+ +++ ++L ++ + + + G ++L+ +Y+K
Sbjct: 114 HRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKC 173
Query: 380 GSIDKAYELFHG--LRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNL---VT 434
G + +F+G + D VA +AMI + G A+ +F + P L ++
Sbjct: 174 GKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWR------NPELNDTIS 227
Query: 435 YTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLL 477
+ ++ Y G EE SM++NGL +G ++++L
Sbjct: 228 WNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVL 270
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 260/529 (49%), Gaps = 49/529 (9%)
Query: 57 VHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCAR 116
V + + + D+ S+ +I Q G EA+ L +M G P S ++S L C R
Sbjct: 101 VRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTR 160
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
+ SK+ + A + DE +++V+ +L
Sbjct: 161 MGSS-----------------------------SKVARMFHALVLVDERMQESVLLSTAL 191
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
+ YLK D A H+FD++ K+ +SW +MISG N + LF+ M NL
Sbjct: 192 VDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNR 251
Query: 237 TMIAGYIDS------GSIL-------SAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAH 283
+ + + GS L S R A +R + + +TM Y + G+V +
Sbjct: 252 VTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHA-DERLTAAFMTM---YCRCGNVSLSR 307
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
LF+ +D++ +++MI+ YA+ E + L N M K + + +TL +++SAC+
Sbjct: 308 VLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE--GIEANSVTLLAIVSACTN 365
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
L + S I G + L AL+D+YAK GS+ A E+F+ L ++DLV++S+M
Sbjct: 366 STLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSM 425
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGL 463
I +G++G S+A+++F+ M+ + + + IL+A NHAGLVEE F +
Sbjct: 426 INAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHM 485
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVEL-GEIAV 522
++HY ++LLGR G +D+A+E+ INMP +P+A +W +LL AC H +++ G+I
Sbjct: 486 PVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIA 545
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+K E D Y LLS I+ G + A+++R ++ + + K G S
Sbjct: 546 NELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFS 594
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 190/457 (41%), Gaps = 47/457 (10%)
Query: 1 MVATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPI 60
+VA+ L + S+ A+ HA +L++ E + + L+ + + H +
Sbjct: 150 LVASLLALCTRMGSSSKVARMFHALVLVDERMQ-ESVLLSTALVDMYLKFDDHAAAFH-V 207
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ + SW +I + V L+ MQR L P + S L +C +
Sbjct: 208 FDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYG 267
Query: 121 LGGV-SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
V IHG G + A + +Y + G+V +R +F+ ++VV W+S++SG
Sbjct: 268 SSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISG 327
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNS-----MISGYSKAGNMDQANSLFQKMPERNLAS 234
Y + GD E +L +++ K+ I NS ++S + + + A+++ ++ + S
Sbjct: 328 YAETGDCSEVMNLLNQMR-KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS 386
Query: 235 ----WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
N +I Y GS+ +AREVF + +++ VS +MI Y G
Sbjct: 387 HILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHG------------- 433
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
EALE+F M+K V D M +++SAC+ G +E
Sbjct: 434 ------------------HGSEALEIFKGMIKGGHEV--DDMAFLAILSACNHAGLVEEA 473
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL-RKRDLVAYSAMIYGFGI 409
+ I + + + + ++L + G ID A+E+ + K +S+++
Sbjct: 474 QTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACET 533
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
+GR A K+ L ++ N Y + + +G
Sbjct: 534 HGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESG 570
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/530 (27%), Positives = 265/530 (50%), Gaps = 88/530 (16%)
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL-KAGD 185
HG + G +++Q LL Y+K+ + A K+FDEM +N+V+WN L+ G + + GD
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 186 LDEAQHL----FDKIPGKDV----ISW--------------------------------- 204
+ HL +I DV +S+
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCF 178
Query: 205 --NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG---------------- 246
S++ Y K G + +A +F+ + +R+L WN +++ Y+ +G
Sbjct: 179 PSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDK 238
Query: 247 -----------SILSAREV----------FDAMPKRNSVSLITMIAGYSKSGDVDSAHKL 285
S+LSA + F + + ++ Y+KS + A +
Sbjct: 239 NRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDAREC 298
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
F+ M ++++S+NAMI +AQN + +EA+ LF ML N+ PD++T ASV+S+C++
Sbjct: 299 FESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE--NLQPDELTFASVLSSCAKFS 356
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
+ + +++ + G +A +L+ Y+++G++ +A FH +R+ DLV+++++I
Sbjct: 357 AIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIG 416
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
+G A +++++FE ML + + P+ +T+ +L+A +H GLV+EG CF M + +
Sbjct: 417 ALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIE 475
Query: 466 LVD-HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH 524
D HY ++DLLGRAG++DEA +++ +MPT+P+ A C +H E + +
Sbjct: 476 AEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKK 535
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI--KTPGCSW 572
+++E YS+LS+ Y + G W+ A LR + +N KTPGCSW
Sbjct: 536 LLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRER-RNCYNPKTPGCSW 584
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 55/291 (18%)
Query: 109 SALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK 168
S+L S RI+ G IH + + Y + V TALL++Y+K + AR+ F+ M +
Sbjct: 249 SSLLSACRIEQ---GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR 305
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLF----------DKIPGKDVIS--------W------ 204
NVVSWN+++ G+ + G+ EA LF D++ V+S W
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQ 365
Query: 205 ---------------NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSIL 249
NS+IS YS+ GN+ +A F + E +L SW ++I G
Sbjct: 366 AMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAE 425
Query: 250 SAREVFDAMPKR---NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS-----YNAMI 301
+ ++F++M ++ + ++ + +++ S G V + F +M E + Y +I
Sbjct: 426 ESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLI 485
Query: 302 ACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
+ EA ++ N M P LA+ C+ E +W
Sbjct: 486 DLLGRAGFIDEASDVLNSM-----PTEPSTHALAAFTGGCNIHEKRESMKW 531
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 259/534 (48%), Gaps = 61/534 (11%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + D SW ++ F G+ ++A+ L M G +SAL +C
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G +HG V V G Y N + N+L+S
Sbjct: 378 FEKGRILHGLVVVSGL------------FY-------------------NQIIGNALVSM 406
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
Y K G++ E++ + ++P +DV++WN++I GY++ + D+A + FQ M ++S
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS----- 461
Query: 240 AGYIDSGSILSAREVFDAMPKRNSV------------------SLITMIAGYSKSGDVDS 281
YI S+LSA + + +R SLITM Y+K GD+ S
Sbjct: 462 -NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM---YAKCGDLSS 517
Query: 282 AHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
+ LF+ +D ++++++NAM+A A + +E L+L + M V D+ + + +SA
Sbjct: 518 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM--RSFGVSLDQFSFSEGLSAA 575
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYS 401
++L LE + + G D + A D+Y+K G I + ++ R L +++
Sbjct: 576 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 635
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KD 460
+I G +G + F +ML I P VT+ +LTA +H GLV++G ++ + +D
Sbjct: 636 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 695
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEI 520
GL P ++H ++DLLGR+G L EA I MP +PN VW +LL +C++H N++ G
Sbjct: 696 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 755
Query: 521 AVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
A ++ KLE + Y L S+++A GRW+D + +R + KN+ K CSW +
Sbjct: 756 AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 809
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 210/451 (46%), Gaps = 49/451 (10%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG-GVSI 126
+ SW ++ + G ++E + + +M +G+ P+S I+S + +C R GV +
Sbjct: 22 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 81
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
HG V G + VYV TA+L LY G V +RKVF+EM
Sbjct: 82 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM--------------------- 120
Query: 187 DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG 246
P ++V+SW S++ GYS G ++ +++ M + ++ I S
Sbjct: 121 ----------PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Query: 247 SILS----AREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYN 298
+L R++ + K S + ++I+ G+VD A+ +FDQM E+D +S+N
Sbjct: 171 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 230
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW---IES 355
++ A YAQN +E+ +F+ M + D++ +V + S LG ++H +W I
Sbjct: 231 SIAAAYAQNGHIEESFRIFSLMRR-----FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 285
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
+ G + L+ +YA +G +A +F + +DL+++++++ F +GR+ D
Sbjct: 286 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 345
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD 475
A+ L M+ N VT+T L A E+G + +GL +V
Sbjct: 346 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 405
Query: 476 LLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+ G+ G + E+ +++ MP + + W AL+
Sbjct: 406 MYGKIGEMSESRRVLLQMPRR-DVVAWNALI 435
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 176/374 (47%), Gaps = 13/374 (3%)
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
Y K G + A+HLFD +P ++ +SWN+M+SG + G + F+KM + + + +I
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 240 AGYID----SGSIL-SAREVFDAMPKRNSVSLITMIAG----YSKSGDVDSAHKLFDQMD 290
A + SGS+ +V + K +S + + Y G V + K+F++M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
+++++S+ +++ Y+ +P+E ++++ M + + + M+L VIS+C L D
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKDESLG 179
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
R I + G+ + +L+ + G++D A +F + +RD ++++++ + N
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
G ++ ++F M + N T + +L+ H + G + G +V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES 530
++ + AG EA + MPT+ + W + L+A +++ L + + +
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNS-LMASFVNDGRSLDALGLLCSMISSG 357
Query: 531 DTVGYYSLLSSIYA 544
+V Y + S++ A
Sbjct: 358 KSVNYVTFTSALAA 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 128/306 (41%), Gaps = 25/306 (8%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHILINGL----HHLEPLFIHHILLWDVNNYKPLSHYV 57
V + L+ + L K +HA+I+ G H L + D+++ + L
Sbjct: 466 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL---- 521
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
+ L N + +W ++ + G E + L +M+ G+ + S L + A++
Sbjct: 522 ---FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL 578
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G +HG LG++ ++ A D+YSK G++G K+ +++ SWN L+
Sbjct: 579 AVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI 638
Query: 178 SGYLKAGDLDEAQHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQKMP--- 228
S + G +E F ++ PG +++ S+++ S G +D+ + + +
Sbjct: 639 SALGRHGYFEEVCATFHEMLEMGIKPGH--VTFVSLLTACSHGGLVDKGLAYYDMIARDF 696
Query: 229 --ERNLASWNTMIAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSAHKL 285
E + +I SG + A MP K N + +++A G++D K
Sbjct: 697 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 756
Query: 286 FDQMDE 291
+ + +
Sbjct: 757 AENLSK 762
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/534 (28%), Positives = 259/534 (48%), Gaps = 61/534 (11%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + D SW ++ F G+ ++A+ L M G +SAL +C
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G +HG V V G Y N + N+L+S
Sbjct: 361 FEKGRILHGLVVVSGL------------FY-------------------NQIIGNALVSM 389
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
Y K G++ E++ + ++P +DV++WN++I GY++ + D+A + FQ M ++S
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS----- 444
Query: 240 AGYIDSGSILSAREVFDAMPKRNSV------------------SLITMIAGYSKSGDVDS 281
YI S+LSA + + +R SLITM Y+K GD+ S
Sbjct: 445 -NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM---YAKCGDLSS 500
Query: 282 AHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
+ LF+ +D ++++++NAM+A A + +E L+L + M V D+ + + +SA
Sbjct: 501 SQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM--RSFGVSLDQFSFSEGLSAA 558
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYS 401
++L LE + + G D + A D+Y+K G I + ++ R L +++
Sbjct: 559 AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 618
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KD 460
+I G +G + F +ML I P VT+ +LTA +H GLV++G ++ + +D
Sbjct: 619 ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 678
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEI 520
GL P ++H ++DLLGR+G L EA I MP +PN VW +LL +C++H N++ G
Sbjct: 679 FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 738
Query: 521 AVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
A ++ KLE + Y L S+++A GRW+D + +R + KN+ K CSW +
Sbjct: 739 AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 792
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 210/451 (46%), Gaps = 49/451 (10%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG-GVSI 126
+ SW ++ + G ++E + + +M +G+ P+S I+S + +C R GV +
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
HG V G + VYV TA+L LY G V +RKVF+EM
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM--------------------- 103
Query: 187 DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG 246
P ++V+SW S++ GYS G ++ +++ M + ++ I S
Sbjct: 104 ----------PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Query: 247 SILS----AREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYN 298
+L R++ + K S + ++I+ G+VD A+ +FDQM E+D +S+N
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 213
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW---IES 355
++ A YAQN +E+ +F+ M + D++ +V + S LG ++H +W I
Sbjct: 214 SIAAAYAQNGHIEESFRIFSLMRR-----FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
+ G + L+ +YA +G +A +F + +DL+++++++ F +GR+ D
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 328
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD 475
A+ L M+ N VT+T L A E+G + +GL +V
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 476 LLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+ G+ G + E+ +++ MP + + W AL+
Sbjct: 389 MYGKIGEMSESRRVLLQMPRR-DVVAWNALI 418
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 166/358 (46%), Gaps = 13/358 (3%)
Query: 196 IPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYID----SGSIL-S 250
+P ++ +SWN+M+SG + G + F+KM + + + +IA + SGS+
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 251 AREVFDAMPKRNSVSLITMIAG----YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ 306
+V + K +S + + Y G V + K+F++M +++++S+ +++ Y+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
+P+E ++++ M + + + M+L VIS+C L D R I + G+
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE 426
+ +L+ + G++D A +F + +RD ++++++ + NG ++ ++F M
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 427 NIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA 486
+ N T + +L+ H + G + G +V ++ + AG EA
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 487 YELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYA 544
+ MPT+ + W + L+A +++ L + + + +V Y + S++ A
Sbjct: 299 NLVFKQMPTK-DLISWNS-LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAA 354
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 128/306 (41%), Gaps = 25/306 (8%)
Query: 2 VATKLTTLMKKCSTLNHAKQIHAHILINGL----HHLEPLFIHHILLWDVNNYKPLSHYV 57
V + L+ + L K +HA+I+ G H L + D+++ + L
Sbjct: 449 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL---- 504
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
+ L N + +W ++ + G E + L +M+ G+ + S L + A++
Sbjct: 505 ---FNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL 561
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G +HG LG++ ++ A D+YSK G++G K+ +++ SWN L+
Sbjct: 562 AVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI 621
Query: 178 SGYLKAGDLDEAQHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQKMP--- 228
S + G +E F ++ PG +++ S+++ S G +D+ + + +
Sbjct: 622 SALGRHGYFEEVCATFHEMLEMGIKPGH--VTFVSLLTACSHGGLVDKGLAYYDMIARDF 679
Query: 229 --ERNLASWNTMIAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSAHKL 285
E + +I SG + A MP K N + +++A G++D K
Sbjct: 680 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 739
Query: 286 FDQMDE 291
+ + +
Sbjct: 740 AENLSK 745
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 159/523 (30%), Positives = 252/523 (48%), Gaps = 93/523 (17%)
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG-------------- 184
V+ ++ Y+K + AR++FDE+ + + VS+N+L+SGY A
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRK 133
Query: 185 ---------------------DLDEAQHLFDKIPGKDVISW--NSMISGYSKAGNMDQAN 221
DL + H F G D S N+ ++ YSK G + +A
Sbjct: 134 LGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAV 193
Query: 222 SLFQKMPE-RNLASWNTMIAGY----------------------IDS---GSILSAREVF 255
S+F M E R+ SWN+MI Y ID S+L+A
Sbjct: 194 SVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSL 253
Query: 256 D--------------AMPKRNSVSLITMIAGYSKSGDVDS---AHKLFDQMDEKDLLSYN 298
D A +NS +I YSK G D + K+F ++ DL+ +N
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWN 313
Query: 299 AMIACYAQNSK-PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE-----HWRW 352
MI+ Y+ N + +EA++ F M + I PD + V SACS L H
Sbjct: 314 TMISGYSMNEELSEEAVKSFRQMQR--IGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 353 IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGR 412
I+SHI + +++ AL+ LY KSG++ A +F + + + V+++ MI G+ +G
Sbjct: 372 IKSHIPSNRISVNN----ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGH 427
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYG 471
++A+ L+++ML I PN +T+ +L+A H G V+EG FN+MK+ + P +HY
Sbjct: 428 GTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYS 487
Query: 472 IMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD 531
M+DLLGRAG L+EA I MP +P + W ALL ACR H N+ L E A + ++
Sbjct: 488 CMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPL 547
Query: 532 TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
Y +L+++YA+ +W++ +R ++GK + K PGCSW +
Sbjct: 548 AATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIE 590
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 221/498 (44%), Gaps = 61/498 (12%)
Query: 111 LKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV 170
LKS A +D G S+H + Y+ ++LYSK G + AR F E NV
Sbjct: 16 LKSVAE-RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNV 74
Query: 171 VSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER 230
S+N ++ Y K + A+ LFD+IP D +S+N++ISGY+ A A LF++M +
Sbjct: 75 FSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKL 134
Query: 231 NLA----SWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI--TMIAGYSKSGDVDSAHK 284
+ + +IA D ++ F +S S + + YSK G + A
Sbjct: 135 GFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 285 LFDQMDE-KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
+F MDE +D +S+N+MI Y Q+ + +AL L+ M+ + D TLASV++A +
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI--DMFTLASVLNALTS 252
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE---LFHGLRKRDLVAY 400
L L R + G + H+ + L+D Y+K G D Y+ +F + DLV +
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 401 SAMIYGFGINGRAS-DAIKLFEQMLGENIGPNLVTYTGILTA------------------ 441
+ MI G+ +N S +A+K F QM P+ ++ + +A
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAI 372
Query: 442 ------------------YNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
Y +G +++ W F+ M + V + M+ + G
Sbjct: 373 KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS----FNCMIKGYAQHGHG 428
Query: 484 DEA---YELIINMPTQPNADVWGALLLACRLHNNVELGEI---AVQHCIKLESDTVGYYS 537
EA Y+ +++ PN + A+L AC V+ G+ ++ K+E + +YS
Sbjct: 429 TEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA-EHYS 487
Query: 538 LLSSIYANLGRWDDAKKL 555
+ + G+ ++A++
Sbjct: 488 CMIDLLGRAGKLEEAERF 505
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 216/407 (53%), Gaps = 22/407 (5%)
Query: 165 MAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLF 224
+EKN + LL + GD+ A+ +FD++ + WN++ GY + ++ L+
Sbjct: 39 FSEKNSL-LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLY 97
Query: 225 QKMPERNLA----SWNTMIA-----GYIDSGSILSAREV---FDAMPKRNSVSLITMIAG 272
+KM + + ++ ++ G G L A V F + + ++
Sbjct: 98 KKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL----GIVATELVMM 153
Query: 273 YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
Y K G++ SA LF+ M KDL+++NA +A Q ALE FN M + D
Sbjct: 154 YMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF--DSF 211
Query: 333 TLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
T+ S++SAC QLG LE I + + + A +D++ K G+ + A LF +
Sbjct: 212 TVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEM 271
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
++R++V++S MI G+ +NG + +A+ LF M E + PN VT+ G+L+A +HAGLV EG
Sbjct: 272 KQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGK 331
Query: 453 WCFNSM---KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
F+ M D L P +HY MVDLLGR+G L+EAYE I MP +P+ +WGALL AC
Sbjct: 332 RYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGAC 391
Query: 510 RLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLR 556
+H ++ LG+ ++ D Y+ LLS+IYA G+WD K+R
Sbjct: 392 AVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 179/399 (44%), Gaps = 56/399 (14%)
Query: 6 LTTLMKKCSTL-NHAKQIHAHILINGLHH----LEPLFIHHILLWDVNNYKPLSHYVHPI 60
L+ L++ S+ K+IHA +L G L L + +++ D+ Y +
Sbjct: 13 LSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMC-------YARQV 65
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+H P F W + + + + E++ LY +M+ +G+ P +K+ +++ D
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G ++H V G+ V T L+ +Y K G++ +A +F+ M K++V+WN+ L+
Sbjct: 126 SCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVC 185
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
++ G+ A F+K+ D + SM+S + G+++ ++ + + N+
Sbjct: 186 VQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI 245
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK 292
N + ++ G+ +AR +F+ M +RN VS TMI GY+ +GD
Sbjct: 246 IVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD-------------- 291
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWR 351
+EAL LF M + P+ +T V+SACS G + E R
Sbjct: 292 -----------------SREALTLFTTMQNE--GLRPNYVTFLGVLSACSHAGLVNEGKR 332
Query: 352 WIESHI--NDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
+ + ND + +VDL +SG +++AYE
Sbjct: 333 YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEF 371
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 162/599 (27%), Positives = 274/599 (45%), Gaps = 92/599 (15%)
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
+++ DS SW ++ G E + + +++ G P + + + +C + G
Sbjct: 87 MNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLW--FDG 144
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
IHG V G+ VQ ++L +Y+ D +ARK+FDEM+E++V+SW+ ++ Y+++
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQS 203
Query: 184 G--------------------------------------DLDEAQHLFDKIPG---KDVI 202
D+ + H F G DV
Sbjct: 204 KEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 203 SWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR- 261
NS+I YSK ++D A +F + RN+ SWN+++AG++ + A E+F M +
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 262 --------------------------------------NSVSLITMIAGYSKSGDVDSAH 283
N V+L ++I Y+ VD A
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
+ D M KD++S + MI+ A + EA+ +F +M P+ +T+ S+++ACS
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT-----PNAITVISLLNACSV 438
Query: 344 LGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
DL +W + ++D + T++VD YAK G+I+ A F + ++++++++
Sbjct: 439 SADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTV 498
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+I + ING A+ LF++M + PN VTY L+A NH GLV++G F SM +
Sbjct: 499 IISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEED 558
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMP--TQPNADVWGALLLACR-LHNNVELGE 519
P + HY +VD+L RAG +D A ELI N+P + A WGA+L CR + +
Sbjct: 559 HKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITS 618
Query: 520 IAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQRVSL 578
V ++LE Y L SS +A W+D +R VK + V G S + +L
Sbjct: 619 EVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNL 677
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 206/451 (45%), Gaps = 61/451 (13%)
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP----E 229
NS+ Y+K GDL FD + +D +SWN ++ G G ++ F K+ E
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 230 RNLASWNTMIAG----YIDSGSI--LSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAH 283
N ++ +I + D I R F + + S++ M A D SA
Sbjct: 125 PNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQN-SILCMYA----DSDSLSAR 179
Query: 284 KLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
KLFD+M E+D++S++ +I Y Q+ +P L+LF M+ E PD +T+ SV+ AC+
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVH-EAKTEPDCVTVTSVLKACTV 238
Query: 344 LGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
+ D++ R + G L D + +L+D+Y+K +D A+ +F R++V++++
Sbjct: 239 MEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNS 298
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYN-----------HAGLVEEG 451
++ GF N R +A+++F M+ E + + VT +L H ++ G
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 452 YWCFNSMKDNGLV------PLVDHYGIMVDL---------------LGRAGWLDEAYELI 490
Y N + + L+ LVD G ++D L AG DEA +
Sbjct: 359 YES-NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 491 INMPTQPNADVWGALLLACRLHNNVELGE----IAVQHCIKLESDTVGYYSLLSSIYANL 546
+M PNA +LL AC + ++ + IA++ + + +VG + + YA
Sbjct: 418 CHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVG--TSIVDAYAKC 475
Query: 547 GRWDDAKKLRMGVKGKNVIKTPGCSWTQRVS 577
G + A++ + KN+I SWT +S
Sbjct: 476 GAIEMARRTFDQITEKNII-----SWTVIIS 501
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 189/317 (59%), Gaps = 15/317 (4%)
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDEK-DLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
+++ YS GDVD A ++FD+ EK +++ + AMI+ Y +N EA+ELF M +I
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHI--NDFGVVLDDHLATALVDLYAKSGSIDK 384
+ D + + +SAC+ LG ++ I S + +D L +L+++Y KSG +K
Sbjct: 165 L--DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEK 222
Query: 385 AYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN------IGPNLVTYTGI 438
A +LF ++D+ Y++MI+G+ +NG+A ++++LF++M + I PN VT+ G+
Sbjct: 223 ARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGV 282
Query: 439 LTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQP 497
L A +H+GLVEEG F SM D L P H+G MVDL R+G L +A+E I MP +P
Sbjct: 283 LMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKP 342
Query: 498 NADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRM 557
N +W LL AC LH NVELGE + +L+ D VG Y LS+IYA+ G WD+ K+R
Sbjct: 343 NTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRD 402
Query: 558 GVKGKNVIKTPGCSWTQ 574
V+ + + PG SW +
Sbjct: 403 RVRKR---RMPGKSWIE 416
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/428 (23%), Positives = 184/428 (42%), Gaps = 90/428 (21%)
Query: 79 FSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTC 138
F Q F+++ S+ ++ +SSA K+ + L G IH V LG++
Sbjct: 55 FRQSPSFVDSFSVLFAIK----------VSSAQKASS-----LDGRQIHALVRKLGFNAV 99
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAEK-NVVSWNSLLSGYLKAGDLDEAQHLFDKIP 197
+ +QT+L+ YS +GDV AR+VFDE EK N+V W +++S Y + + EA LF ++
Sbjct: 100 IQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME 159
Query: 198 GK-----------------------------------------DVISWNSMISGYSKAGN 216
+ D+ NS+++ Y K+G
Sbjct: 160 AEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE 219
Query: 217 MDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVF----------DAMPKRNSVSL 266
++A LF + +++ ++ +MI GY +G + E+F D + N V+
Sbjct: 220 TEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTF 279
Query: 267 ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYN---------AMIACYAQNSKPKEALELF 317
I ++ S SG V+ + F M ++ YN M+ + ++ K+A E
Sbjct: 280 IGVLMACSHSGLVEEGKRHFKSM----IMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFI 335
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA--TALVDL 375
N M + P+ + +++ ACS G++E ++ I + DH+ AL ++
Sbjct: 336 NQM-----PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELD---RDHVGDYVALSNI 387
Query: 376 YAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTY 435
YA G D+ ++ +RKR + S + G IN S EQ++ I L
Sbjct: 388 YASKGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEFVSGPDNNDEQLMMGEISEVLRCL 447
Query: 436 TGILTAYN 443
+T+++
Sbjct: 448 VSCMTSFD 455
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 33/261 (12%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
W +I +++ +EA+ L+ +M+ + ++ AL +CA LG V + +++
Sbjct: 135 WTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACA----DLGAVQMGEEIY 190
Query: 132 V--------LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
L D + ++ +LL++Y K G+ ARK+FDE K+V ++ S++ GY
Sbjct: 191 SRSIKRKRRLAMD--LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALN 248
Query: 184 GDLDEAQHLFDKIPGKD-----VISWNS-----MISGYSKAGNMDQANSLFQKM-PERNL 232
G E+ LF K+ D VI+ N ++ S +G +++ F+ M + NL
Sbjct: 249 GQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNL 308
Query: 233 ----ASWNTMIAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDV---DSAHK 284
A + M+ + SG + A E + MP K N+V T++ S G+V + +
Sbjct: 309 KPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQR 368
Query: 285 LFDQMDEKDLLSYNAMIACYA 305
++D + Y A+ YA
Sbjct: 369 RIFELDRDHVGDYVALSNIYA 389
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 224/411 (54%), Gaps = 27/411 (6%)
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYS-KAGNMDQANSLFQKMPERNLASWNTMIAGYI 243
D++ A +FD I WN++I + ++A L++KM ER +S + ++
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 244 DSGS-----ILSAREVFDAMPKRNSVSLITMIAG----YSKSGDVDSAHKLFDQMDEKDL 294
++V + K + + G Y G +D A K+FD+M E+ L
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+S+N+MI + + AL+LF M + + PD T+ SV+SAC+ LG L W
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQR---SFEPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 355 SHI---NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
+ + D V +D + +L+++Y K GS+ A ++F G++KRDL +++AMI GF +G
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 412 RASDAIKLFEQMLG--ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVD 468
RA +A+ F++M+ EN+ PN VT+ G+L A NH G V +G F+ M +D + P ++
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA-CRLHNNVELGEIAVQHCIK 527
HYG +VDL+ RAG++ EA +++++MP +P+A +W +LL A C+ +VEL E ++ I
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIG 454
Query: 528 LESD-------TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
+ D G Y LLS +YA+ RW+D +R + + K PGCS
Sbjct: 455 TKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 505
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 177/397 (44%), Gaps = 63/397 (15%)
Query: 5 KLTTLMKKCSTLNHAKQIHAHILINGLHHLEP--LFIHHILLWDVNNYKPLSHYVHPILH 62
++ +L + CS ++ KQ+HA L + EP LF++ +L +++ + +Y +
Sbjct: 50 RIFSLAETCSDMSQLKQLHAFTL-RTTYPEEPATLFLYGKILQLSSSFSDV-NYAFRVFD 107
Query: 63 NLHNPDSFSWGCVIRFFSQK-GQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCARIQDK 120
++ N SF W +IR + + EA LY +M +R P H LK+CA I
Sbjct: 108 SIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGF 167
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY 180
G +H Q+ G+ VYV L+ LY G + ARKVFDEM E+++VSWNS++
Sbjct: 168 SEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDAL 227
Query: 181 LKAGDLDEAQHLFDKIP-----------------------------------------GK 199
++ G+ D A LF ++
Sbjct: 228 VRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 287
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP 259
DV+ NS+I Y K G++ A +FQ M +R+LASWN MI G+ G A FD M
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 260 KR------NSVSLITMIAGYSKSGDVDSAHKLFDQM-----DEKDLLSYNAMIACYAQNS 308
+ NSV+ + ++ + G V+ + FD M E L Y ++ A+
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 407
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
EA+++ M + PD + S++ AC + G
Sbjct: 408 YITEAIDMVMSM-----PMKPDAVIWRSLLDACCKKG 439
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 11/249 (4%)
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMI-ACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
S DV+ A ++FD ++ +N +I AC S+ +EA L+ ML+ PDK
Sbjct: 94 SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE-RGESSPDKH 152
Query: 333 TLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
T V+ AC+ + + + I G D ++ L+ LY G +D A ++F +
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 393 RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
+R LV++++MI G A++LF +M + P+ T +L+A G + G
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGT 271
Query: 453 WCFNSM-----KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLL 507
W + D + LV + ++++ + G L A ++ M + A W A++L
Sbjct: 272 WAHAFLLRKCDVDVAMDVLVKNS--LIEMYCKCGSLRMAEQVFQGMQKRDLAS-WNAMIL 328
Query: 508 ACRLHNNVE 516
H E
Sbjct: 329 GFATHGRAE 337
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 164/572 (28%), Positives = 287/572 (50%), Gaps = 84/572 (14%)
Query: 18 HAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIR 77
+ +HAH++ +G+ L + + + V K L + + P GCV+
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFY-VECGKVLD--ARKVFDEM--PKRDISGCVVM 88
Query: 78 F--FSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY 135
++ G + E++ + +M + GL + + S LK+ + D+ G IH V Y
Sbjct: 89 IGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSY 148
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK 195
++ ++ ++L+D+YSK G++ A+ +F
Sbjct: 149 ESDAFIVSSLIDMYSKF-------------------------------GEVGNARKVFSD 177
Query: 196 IPGKDVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSA 251
+ +D++ +N+MISGY+ D+A +L + M + ++ +WN +I+G+ +
Sbjct: 178 LGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKV 237
Query: 252 REVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPK 311
E+ + M + GY + D++S+ ++I+ N + +
Sbjct: 238 SEILELM----------CLDGY-----------------KPDVVSWTSIISGLVHNFQNE 270
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV--LDDH-- 367
+A + F ML ++P+ T+ +++ AC+ L ++H + I+ + VV L+DH
Sbjct: 271 KAFDAFKQMLTH--GLYPNSATIITLLPACTTLAYMKHGK----EIHGYSVVTGLEDHGF 324
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN 427
+ +AL+D+Y K G I +A LF K+ V +++MI+ + +G A A++LF+QM E
Sbjct: 325 VRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQM--EA 382
Query: 428 IGPNL--VTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLD 484
G L +T+T ILTA +HAGL + G F M++ +VP ++HY MVDLLGRAG L
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLV 442
Query: 485 EAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYA 544
EAYE+I M +P+ VWGALL ACR H N+EL IA +H +LE + G LL+S+YA
Sbjct: 443 EAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYA 502
Query: 545 NLGRWDDAKKLRMGVKGKNVIKTPGCSWTQRV 576
N G W+ +++ +K K + G SW + V
Sbjct: 503 NAGSWESVVRMKKMIKKKRFRRFLGSSWVETV 534
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 154/546 (28%), Positives = 268/546 (49%), Gaps = 86/546 (15%)
Query: 110 ALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKN 169
ALK C+ K + IHG G+ + + ++ L+DLY K GDV ARK+FD +++++
Sbjct: 18 ALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRD 77
Query: 170 VVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV---------------------------- 201
VVSW +++S + + G +A LF ++ +DV
Sbjct: 78 VVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHG 137
Query: 202 -----------ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS----- 245
I ++++S Y++ G M++A F M ER+L SWN MI GY +
Sbjct: 138 SVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADT 197
Query: 246 --------------------GSILSAREVFDAMP--------------KRNSVSLITMIA 271
GS+L A V + R+S + +++
Sbjct: 198 SFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVN 257
Query: 272 GYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ-NSKPKEALELFNYMLKPEINVHPD 330
Y K G + +A KL + ++DLLS A+I ++Q N+ +A ++F M++ + + D
Sbjct: 258 AYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM--D 315
Query: 331 KMTLASVISACSQLGDLEHWRWIESH-INDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
++ ++S++ C+ + + R I + + D L +L+D+YAKSG I+ A F
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
++++D+ +++++I G+G +G AI L+ +M E I PN VT+ +L+A +H G E
Sbjct: 376 EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTE 435
Query: 450 EGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP--TQPNADVWGALL 506
G+ +++M +G+ +H ++D+L R+G+L+EAY LI + ++ WGA L
Sbjct: 436 LGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFL 495
Query: 507 LACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI- 565
ACR H NV+L ++A + +E Y L+S+YA G WD+A R +K
Sbjct: 496 DACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCN 555
Query: 566 KTPGCS 571
K PG S
Sbjct: 556 KAPGYS 561
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 209/481 (43%), Gaps = 91/481 (18%)
Query: 10 MKKCSTLNHAKQ---IHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHN 66
+K CS N KQ IH + + NG L + +L+ D+ + + + +
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGF--CSNLQLKDMLI-DLYLKQGDVKHARKLFDRISK 75
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
D SW +I FS+ G +A+ L+ +M R + S LKSC + G+ I
Sbjct: 76 RDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQI 135
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDL 186
HG V + V++ALL LY++ G + AR FD M E+++VSWN+++ GY
Sbjct: 136 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACA 195
Query: 187 DEAQHLFD------KIP---------------------------------GKDVISWNSM 207
D + LF K P G+ S+
Sbjct: 196 DTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSL 255
Query: 208 ISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILS-AREVFDAMPKRNS--- 263
++ Y K G++ A L + +R+L S +I G+ + S A ++F M + +
Sbjct: 256 VNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMD 315
Query: 264 -------VSLITMIAG------------------------------YSKSGDVDSAHKLF 286
+ + T IA Y+KSG+++ A F
Sbjct: 316 EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAF 375
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
++M EKD+ S+ ++IA Y ++ ++A++L+N M I P+ +T S++SACS G
Sbjct: 376 EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK--PNDVTFLSLLSACSHTGQ 433
Query: 347 LE-HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
E W+ ++ IN G+ + + ++D+ A+SG +++AY L K +V+ S+ +
Sbjct: 434 TELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRS--KEGIVSLSSSTW 491
Query: 406 G 406
G
Sbjct: 492 G 492
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 9/189 (4%)
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
NY+L P + + K+ CS + I + G + L L+DLY
Sbjct: 7 NYLLSPSLYLKALKL--------CSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYL 58
Query: 378 KSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTG 437
K G + A +LF + KRD+V+++AMI F G DA+ LF++M E++ N TY
Sbjct: 59 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118
Query: 438 ILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQP 497
+L + G ++EG S++ + ++ L R G ++EA L + +
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEA-RLQFDSMKER 177
Query: 498 NADVWGALL 506
+ W A++
Sbjct: 178 DLVSWNAMI 186
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/583 (26%), Positives = 271/583 (46%), Gaps = 49/583 (8%)
Query: 6 LTTLMKKCSTL---NHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
TTL+ C+ N Q+HA + G L + ++LL + L +
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD-LACVLFE 208
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
+ DS ++ +I + + G + E++ L+++M++ G P+ S LK+ + D
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H G+ V +LD YSK V
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVL-------------------------- 302
Query: 183 AGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLASWNTM 238
E + LFD++P D +S+N +IS YS+A + + F++M +R + TM
Sbjct: 303 -----ETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 239 IAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDEKDL 294
++ + S+ R++ + S++ +++ Y+K + A +F + ++
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+S+ A+I+ Y Q L+LF M N+ D+ T A+V+ A + L + +
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGS--NLRADQSTFATVLKASASFASLLLGKQLH 475
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRAS 414
+ I G + + + LVD+YAK GSI A ++F + R+ V+++A+I NG
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGE 535
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIM 473
AI F +M+ + P+ V+ G+LTA +H G VE+G F +M G+ P HY M
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACM 595
Query: 474 VDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES--D 531
+DLLGR G EA +L+ MP +P+ +W ++L ACR+H N L E A + +E D
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 532 TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
Y S +S+IYA G W+ + ++ ++ + + K P SW +
Sbjct: 656 AAAYVS-MSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVE 697
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 183/392 (46%), Gaps = 29/392 (7%)
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF 193
G+DT +++ + G V ARKV+DEM KN VS N+++SG++K GD+ A+ LF
Sbjct: 43 GFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLF 102
Query: 194 DKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA------SWNTMIAGYIDS-- 245
D +P + V++W ++ Y++ + D+A LF++M + ++ T++ G D+
Sbjct: 103 DAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVP 162
Query: 246 ----GSI--LSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNA 299
G + + + FD P +VS + ++ Y + +D A LF+++ EKD +++N
Sbjct: 163 QNAVGQVHAFAVKLGFDTNPFL-TVSNV-LLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVH-PDKMTLASVISACSQLGDLEHWRWIESHIN 358
+I Y ++ E++ LF LK + H P T + V+ A L D + + +
Sbjct: 221 LITGYEKDGLYTESIHLF---LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIK 418
G D + ++D Y+K + + LF + + D V+Y+ +I + + ++
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 419 LFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVD---HYG-IMV 474
F +M + +L+ + ++ G + L+ D H G +V
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMG----RQLHCQALLATADSILHVGNSLV 393
Query: 475 DLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
D+ + +EA ELI Q W AL+
Sbjct: 394 DMYAKCEMFEEA-ELIFKSLPQRTTVSWTALI 424
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 218/418 (52%), Gaps = 22/418 (5%)
Query: 169 NVVSWNSLLSGYLKAGDL-DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM 227
NVV + L+ Y K L + +F +P +++ SWN +I +S++G ++ LF +M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 228 PERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSA----- 282
+ + I L A + + ++ + G+S S V SA
Sbjct: 125 WRESCVRPDDFTLPLI-----LRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 283 ---------HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
KLFD M +D + Y AM Y Q + L +F M + D +
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFAL--DSVV 237
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+ S++ AC QLG L+H + + L +L A+ D+Y K +D A+ +F +
Sbjct: 238 MVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMS 297
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
+RD++++S++I G+G++G + KLF++ML E I PN VT+ G+L+A H GLVE+ +
Sbjct: 298 RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWL 357
Query: 454 CFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHN 513
F M++ +VP + HY + D + RAG L+EA + + +MP +P+ V GA+L C+++
Sbjct: 358 YFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYG 417
Query: 514 NVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
NVE+GE + I+L+ YY L+ +Y+ GR+D+A+ LR +K K + K PGCS
Sbjct: 418 NVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 175/383 (45%), Gaps = 56/383 (14%)
Query: 65 HNP--DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKSCARIQDKL 121
H P + FSW +I FS+ G +++ L+++M R P + L++C+ ++
Sbjct: 92 HMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAK 151
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G IH LG+ + ++V +AL+ +Y MG + ARK+FD+M ++ V + ++ GY+
Sbjct: 152 SGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYV 211
Query: 182 KAGDLDEAQHLFDKIP--------------------------GKDVISW----------- 204
+ G+ +F ++ GK V W
Sbjct: 212 QQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN 271
Query: 205 --NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR- 261
N++ Y K +D A+++F M R++ SW+++I GY G ++ + ++FD M K
Sbjct: 272 LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEG 331
Query: 262 ---NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS----YNAMIACYAQNSKPKEAL 314
N+V+ + +++ + G V+ + F M E +++ Y ++ C ++ +EA
Sbjct: 332 IEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAE 391
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVD 374
+ ++ V PD+ + +V+S C G++E + + + T L
Sbjct: 392 KFLE-----DMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVT-LAG 445
Query: 375 LYAKSGSIDKAYELFHGLRKRDL 397
LY+ +G D+A L ++++ +
Sbjct: 446 LYSAAGRFDEAESLRQWMKEKQI 468
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/591 (27%), Positives = 283/591 (47%), Gaps = 104/591 (17%)
Query: 76 IRFFSQKGQFIEAVSLY----VQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQV- 130
+R + G AVSL+ V++Q + A ++ ++CA ++ L G+++H +
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQ------SQQAYAALFQACAEQRNLLDGINLHHHML 86
Query: 131 -HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEA 189
H Y V + L+++Y+K G++ AR+VFD M E+NVVSW +L++GY++AG+ E
Sbjct: 87 SHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEG 146
Query: 190 QHLFDKI---------------------PGKDV-------------ISWNSMISGYSKA- 214
LF + PGK V N++IS Y +
Sbjct: 147 FCLFSSMLSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCH 206
Query: 215 --GNMDQANSLFQKMPERNLASWNTMIAGY----------------------IDSGSIL- 249
+A ++F+ + +NL +WN+MIA + D ++L
Sbjct: 207 DGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLN 266
Query: 250 ---SAREVFDAMPKRNSVSLITMIAGYSKSG--------------------DVDSAHKLF 286
S + D +P S + + + KSG D +KLF
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLF 326
Query: 287 DQMDE-KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
+M +D++++N +I +A P+ A+ LF + + +++ PD T +SV+ AC+ L
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLS--PDWYTFSSVLKACAGLV 383
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
H I + + G + D L +L+ YAK GS+D +F + RD+V++++M+
Sbjct: 384 TARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLK 443
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG-LV 464
+ ++G+ + +F++M +I P+ T+ +L+A +HAG VEEG F SM + +
Sbjct: 444 AYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETL 500
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH 524
P ++HY ++D+L RA EA E+I MP P+A VW ALL +CR H N LG++A
Sbjct: 501 PQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADK 560
Query: 525 CIKL-ESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+L E Y +S+IY G +++A ++ V K P SWT+
Sbjct: 561 LKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTE 611
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
H D +W +I F+ A+ L+ Q+++ L P + SS LK+CA + +
Sbjct: 331 HCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHAL 389
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
SIH QV G+ + +L+ Y+K G + +VFD+M ++VVSWNS+L Y G
Sbjct: 390 SIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Query: 185 DLDEAQHLFDKIP-GKDVISWNSMISGYSKAGNMDQANSLFQKMPER-----NLASWNTM 238
+D +F K+ D ++ +++S S AG +++ +F+ M E+ L + +
Sbjct: 450 QVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACV 509
Query: 239 IAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVD----SAHKLFDQMDEKD 293
I + A EV MP ++V I ++ K G+ +A KL + ++ +
Sbjct: 510 IDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTN 569
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPD 330
+SY M Y EA M + PD
Sbjct: 570 SMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPD 606
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 271/585 (46%), Gaps = 114/585 (19%)
Query: 102 PTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKV 161
P LKSCA++ D + G +H QV G+ V+ TAL+ +Y K+ V A KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 162 FDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFD--KIPGK-------------------- 199
DEM E+ + S N+ +SG L+ G +A +F ++ G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 200 --------------DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
+V S++S YS+ G A +F+K+P +++ ++N I+G +++
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 246 GSILSAREVFDAMPKRNS--------VSLITMIAG------------------------- 272
G + VF+ M K +S V+ IT A
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 273 -------YSKSGDVDSAHKLFDQM-DEKDLLSYNAMIACYAQNSKPKEALELFNYM---- 320
YSK SA+ +F ++ D ++L+S+N++I+ N + + A+ELF +
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 321 LKPE-----------------------------INVHPDKMTLASVISACSQLGDLEHWR 351
LKP+ + + P L S++SACS + L++ +
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGK 388
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL--RKRDLVAYSAMIYGFGI 409
I H+ D + T+L+D+Y K G A +F + +D V ++ MI G+G
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVD 468
+G AI++FE + E + P+L T+T +L+A +H G VE+G F M++ G P +
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKL 528
H G M+DLLGR+G L EA E+I M ++ +LL +CR H + LGE A +L
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAEL 567
Query: 529 ESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWT 573
E + + +LSSIYA L RW+D + +R + K ++K PG S +
Sbjct: 568 EPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLS 612
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
PDS +W +I FSQ G+ IEA + +M + + P+ ++S L +C+ I G
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKE 389
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFD--EMAEKNVVSWNSLLSGYLKA 183
IHG V + ++V T+L+D+Y K G AR++FD E K+ V WN ++SGY K
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 184 GDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTM- 238
G+ + A +F+ + + V ++ +++S S GN+++ + +F+ M E +T
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 239 IAGYID----SGSILSAREVFDAM 258
I ID SG + A+EV D M
Sbjct: 510 IGCMIDLLGRSGRLREAKEVIDQM 533
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 157/491 (31%), Positives = 251/491 (51%), Gaps = 62/491 (12%)
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP- 197
V T+++ Y + GDV A ++F EM E+N+VSW +++SG+ EA LF ++
Sbjct: 231 VVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKK 290
Query: 198 --------GKDVIS---------------------------WN----------SMISGYS 212
G+ +IS W S++ Y+
Sbjct: 291 DVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYA 350
Query: 213 KAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK-RNSVSLITMIA 271
+G + A SL + +L S N +I Y+ +G + A +F+ + + VS +MI
Sbjct: 351 SSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID 408
Query: 272 GYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDK 331
GY ++GDV A LF ++ +KD +++ MI+ QN EA L + M++ + P
Sbjct: 409 GYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVR--CGLKPLN 466
Query: 332 MTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL--ATALVDLYAKSGSIDKAYELF 389
T + ++S+ +L+ + I I D L +LV +YAK G+I+ AYE+F
Sbjct: 467 STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF 526
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
+ ++D V++++MI G +G A A+ LF++ML PN VT+ G+L+A +H+GL+
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLIT 586
Query: 450 EGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
G F +MK+ + P +DHY M+DLLGRAG L EA E I +P P+ V+GALL
Sbjct: 587 RGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGL 646
Query: 509 CRLH---NNVE-LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLR--MGVKGK 562
C L+ + E + E A ++L+ + L ++YA LGR D K++R MG+KG
Sbjct: 647 CGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKG- 705
Query: 563 NVIKTPGCSWT 573
V KTPGCSW
Sbjct: 706 -VKKTPGCSWV 715
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 233/458 (50%), Gaps = 58/458 (12%)
Query: 143 TALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA------------------- 183
T+LL Y+K G + AR +F+ M E+N+V+ N++L+GY+K
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVS 140
Query: 184 -----------GDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL 232
G ++A LFD++P ++V+SWN++++G + G+M++A +F MP R++
Sbjct: 141 WTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV 200
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK 292
SWN MI GYI++ + A+ +F M ++N V+ +M+ GY + GDV A++LF +M E+
Sbjct: 201 VSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER 260
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
+++S+ AMI+ +A N +EAL LF M K V P+ TL S+ AC LG +E R
Sbjct: 261 NIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLG-VEFRRL 319
Query: 353 IE---SHINDFGVVLDDH---LATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
E + + G DH LA +LV +YA SG I A L + DL + + +I
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIINR 377
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPL 466
+ NG A LFE++ + + V++T ++ Y AG V + F + D V
Sbjct: 378 YLKNGDLERAETLFERVKSLH---DKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVT- 433
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPT---QPNADVWGALLLACRLHNNVELGEIAVQ 523
+ +M+ L + EA L+ +M +P + LL + +N++ G+
Sbjct: 434 ---WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI-- 488
Query: 524 HCIKLESDTVGY------YSLLSSIYANLGRWDDAKKL 555
HC+ + T Y + L S+YA G +DA ++
Sbjct: 489 HCV-IAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEI 525
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 146/309 (47%), Gaps = 79/309 (25%)
Query: 175 SLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER 230
+L+ L G L A+HL DKIP + V+ W S++S Y+K G +D+A LF+ MPER
Sbjct: 47 ALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER 106
Query: 231 NLASWNTMIAGYI------------------------------DSGSILSAREVFDAMPK 260
N+ + N M+ GY+ D G A E+FD MP+
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPE 166
Query: 261 RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYM 320
RN VS T++ G ++GD++ A ++FD M +D++S+NAMI Y +N +EA LF
Sbjct: 167 RNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFG-- 224
Query: 321 LKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSG 380
M+ +V++ W T++V Y + G
Sbjct: 225 ----------DMSEKNVVT----------W-------------------TSMVYGYCRYG 245
Query: 381 SIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLG--ENIGPNLVTYTGI 438
+ +AY LF + +R++V+++AMI GF N +A+ LF +M + + PN T +
Sbjct: 246 DVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISL 305
Query: 439 LTAYNHAGL 447
AY GL
Sbjct: 306 --AYACGGL 312
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 115/287 (40%), Gaps = 66/287 (22%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ LH+ D +W +I Q F EA SL M R GL P + S L S +
Sbjct: 422 LFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSN 481
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G IH CV +T +D +++ NSL+S
Sbjct: 482 LDQGKHIH----------CVIAKTT---------------ACYD----PDLILQNSLVSM 512
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
Y K G +++A +F K+ KD +SWNSMI G S G D+A +LF++M
Sbjct: 513 YAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEM------------ 560
Query: 240 AGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS--- 296
+DSG K NSV+ + +++ S SG + +LF M E +
Sbjct: 561 ---LDSGK------------KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGI 605
Query: 297 --YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
Y +MI + K KEA E + + PD +++ C
Sbjct: 606 DHYISMIDLLGRAGKLKEAEEFIS-----ALPFTPDHTVYGALLGLC 647
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 18/233 (7%)
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
G L H R + I G + T+L+ YAK+G +D+A LF + +R++V +AM+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV 464
G+ R ++A LF +M N+V++T +LTA G E+ F+ M + +V
Sbjct: 116 TGYVKCRRMNEAWTLFREM-----PKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH 524
+ +V L R G +++A ++ MP++ + W A++ ++ +E E +
Sbjct: 171 S----WNTLVTGLIRNGDMEKAKQVFDAMPSR-DVVSWNAMIKGYIENDGME--EAKLLF 223
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQRVS 577
E + V + S++ Y G +A +L + +N++ SWT +S
Sbjct: 224 GDMSEKNVVTWTSMVYG-YCRYGDVREAYRLFCEMPERNIV-----SWTAMIS 270
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 225/407 (55%), Gaps = 23/407 (5%)
Query: 184 GDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI 243
GDL A +F IP WN++I G++ + + A S ++ M +++ +S +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 244 DSGSIL---------SAREVFDAMPKRNSVS-----LITMIAGYSKSGDVDSAHKLFDQM 289
L SA + R +S T++ YSK+GD+ SA+KLFD+M
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
+D+ S+NA+IA ++ EA+EL+ M + ++T+ + + ACS LGD++
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETE--GIRRSEVTVVAALGACSHLGDVKE 228
Query: 350 WRWI-ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGF 407
I + ND +V + A +D+Y+K G +DKAY++F K+ +V ++ MI GF
Sbjct: 229 GENIFHGYSNDNVIV-----SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV 467
++G A A+++F+++ I P+ V+Y LTA HAGLVE G FN+M G+ +
Sbjct: 284 AVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNM 343
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIK 527
HYG +VDLL RAG L EA+++I +M P+ +W +LL A ++++VE+ EIA + +
Sbjct: 344 KHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKE 403
Query: 528 LESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+ + G + LLS++YA GRW D ++R ++ K V K PG S+ +
Sbjct: 404 MGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIE 450
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 187/432 (43%), Gaps = 61/432 (14%)
Query: 1 MVATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILL--WDVNNYKPLSHYVH 58
M + T+++KC + + KQ+ +H L G H + F+ LL ++ + LS V
Sbjct: 1 MARVYMETMIQKCVSFSQIKQLQSHFLTAG--HFQSSFLRSRLLERCAISPFGDLSFAVQ 58
Query: 59 PILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM-----QRMGLCPTSHAISS-ALK 112
I + P + W +IR F+ A S Y M +C S LK
Sbjct: 59 -IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLK 117
Query: 113 SCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVS 172
+CAR +H Q++ G + T LLD YSK GD+ +A K+FDEM ++V S
Sbjct: 118 ACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVAS 177
Query: 173 WNSLLSGYLKA-----------------------------------GDLDEAQHLFDKIP 197
WN+L++G + GD+ E +++F
Sbjct: 178 WNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 198 GKDVISWNSMISGYSKAGNMDQANSLFQKMP-ERNLASWNTMIAGYIDSGSILSAREVFD 256
+VI N+ I YSK G +D+A +F++ ++++ +WNTMI G+ G A E+FD
Sbjct: 238 NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFD 297
Query: 257 AMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNS 308
+ K + VS + + +G V+ +F+ M E+++ Y ++ ++
Sbjct: 298 KLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAG 357
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
+ +EA ++ M ++ PD + S++ A D+E I + GV D
Sbjct: 358 RLREAHDIICSM-----SMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDF 412
Query: 369 ATALVDLYAKSG 380
L ++YA G
Sbjct: 413 VL-LSNVYAAQG 423
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 8/243 (3%)
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN----VHP 329
S GD+ A ++F + + +NA+I +A +S P A + ML+ +
Sbjct: 48 SPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRV 107
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
D +T + + AC++ + IN G+ D L T L+D Y+K+G + AY+LF
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
+ RD+ +++A+I G RAS+A++L+++M E I + VT L A +H G V+
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
EG F+ ++ ++ +D+ + G++D+AY++ + + W ++
Sbjct: 228 EGENIFHGYSNDNVIV----SNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 510 RLH 512
+H
Sbjct: 284 AVH 286
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/580 (26%), Positives = 275/580 (47%), Gaps = 53/580 (9%)
Query: 7 TTLMKKCS---TLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
+L++ C+ + H Q HAH++ +GL + + LL P +
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN--VGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
D+ SW ++ + + ++A+ ++V+M GL +SSA+K+C+ + + G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
HG V G++ ++ + L LY G R+ D
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLY------GVNREPVD-------------------- 216
Query: 184 GDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPE-----RNLASWNTM 238
A+ +FD++P DVI W +++S +SK ++A LF M + +++ T+
Sbjct: 217 -----ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 239 IAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
+ + + +E+ + N V +++ Y K G V A ++F+ M +K+
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
+S++A++ Y QN + ++A+E+F M + D +V+ AC+ L + + I
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREMEEK------DLYCFGTVLKACAGLAAVRLGKEIH 385
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRAS 414
G + + +AL+DLY KSG ID A ++ + R+++ ++AM+ NGR
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGE 445
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIM 473
+A+ F M+ + I P+ +++ ILTA H G+V+EG F M K G+ P +HY M
Sbjct: 446 EAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCM 505
Query: 474 VDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNV-ELGEIAVQHCIKLESDT 532
+DLLGRAG +EA L+ + +A +WG LL C + + + E + ++LE
Sbjct: 506 IDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKY 565
Query: 533 VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
Y LLS++Y +GR DA +R + + V KT G SW
Sbjct: 566 HMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSW 605
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 198/436 (45%), Gaps = 48/436 (11%)
Query: 83 GQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQ 142
GQ EA+ + + T +S L++C ++ + G+ H V G +T V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 143 TALLDLYSKMG-DVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP--GK 199
+LL LY K+G + R+VFD K+ +SW S++SGY+ + +A +F ++ G
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 200 DV--ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG-----YIDSGSILSAR 252
D + +S + S+ G + + F + + WN I+ Y + + AR
Sbjct: 160 DANEFTLSSAVKACSELGEV-RLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDAR 218
Query: 253 EVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKE 312
VFD MP E D++ + A+++ +++N +E
Sbjct: 219 RVFDEMP-------------------------------EPDVICWTAVLSAFSKNDLYEE 247
Query: 313 ALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATAL 372
AL LF Y + + PD T +V++AC L L+ + I + G+ + + ++L
Sbjct: 248 ALGLF-YAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSL 306
Query: 373 VDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNL 432
+D+Y K GS+ +A ++F+G+ K++ V++SA++ G+ NG AI++F +M + +L
Sbjct: 307 LDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DL 362
Query: 433 VTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIIN 492
+ +L A V G G V ++DL G++G +D A +
Sbjct: 363 YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 493 MPTQPNADVWGALLLA 508
M + N W A+L A
Sbjct: 423 MSIR-NMITWNAMLSA 437
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 153/331 (46%), Gaps = 54/331 (16%)
Query: 6 LTTLMKKCSTLNH---AKQIHAHILINGL--HHLEPLFIHHIL--LWDVNNYKPLSHYVH 58
L++ +K CS L + H ++ +G +H FI L L+ VN +P+
Sbjct: 166 LSSAVKACSELGEVRLGRCFHGVVITHGFEWNH----FISSTLAYLYGVNR-EPVD--AR 218
Query: 59 PILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQR-MGLCPTSHAISSALKSCARI 117
+ + PD W V+ FS+ + EA+ L+ M R GL P + L +C +
Sbjct: 219 RVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNL 278
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
+ G IHG++ G + V V+++LLD+Y K G V AR+VF+ M++KN VSW++LL
Sbjct: 279 RRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALL 338
Query: 178 SGYLKAGDLDEAQHLFDKIPGKD-----------------------------------VI 202
GY + G+ ++A +F ++ KD VI
Sbjct: 339 GGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 203 SWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR- 261
+++I Y K+G +D A+ ++ KM RN+ +WN M++ +G A F+ M K+
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 262 ---NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+ +S I ++ +G VD F M
Sbjct: 459 IKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/546 (27%), Positives = 261/546 (47%), Gaps = 38/546 (6%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
+ + D +W V+ + Q G+ EAV L +M++ G+ P + +
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTAL-------------LDLYSKMGDVGTARKVF 162
++ + + ++ G V+ TA+ LD++ KM G
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 163 DEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANS 222
M+ + S +++ + + D DV+ NS++ YSK G ++ A
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFID-----DVLVGNSLVDMYSKCGKLEDARK 408
Query: 223 LFQKMPERNLASWNTMIAGYIDSGSILSAREVF----DAMPKRNSVSLITMIAGYSKSGD 278
+F + +++ +WN+MI GY +G A E+F DA + N ++ TMI+GY K+GD
Sbjct: 409 VFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 279 VDSAHKLFDQMD-----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
A LF +M+ +++ ++N +IA Y QN K EALELF M P+ +T
Sbjct: 469 EGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF--MPNSVT 526
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+ S++ AC+ L + R I + + + AL D YAKSG I+ + +F G+
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
+D++ ++++I G+ ++G A+ LF QM + I PN T + I+ A+ G V+EG
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 454 CFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLH 512
F S+ D ++P ++H MV L GRA L+EA + I M Q +W + L CR+H
Sbjct: 647 VFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIH 706
Query: 513 NNVELGEIAVQHCIKLESDTVGYYSLLSSIY---ANLGRWDDAKKLRMGVKGKNVIKTP- 568
++++ A ++ LE + S++S IY A LGR + K R N++K P
Sbjct: 707 GDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR----DNLLKKPL 762
Query: 569 GCSWTQ 574
G SW +
Sbjct: 763 GQSWIE 768
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 227/488 (46%), Gaps = 72/488 (14%)
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF----- 193
V+V+T LL +Y+K G + ARKVFD M E+N+ +W++++ Y + E LF
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK 174
Query: 194 ---------------------DKIPGKDVISW-------------NSMISGYSKAGNMDQ 219
D GK + S NS+++ Y+K G +D
Sbjct: 175 DGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDF 234
Query: 220 ANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN-SVSLIT---MIAGYSK 275
A F++M ER++ +WN+++ Y +G A E+ M K S L+T +I GY++
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 276 SGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDK 331
G D+A L +M+ D+ ++ AMI+ N +AL++F M V P+
Sbjct: 295 LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA--GVVPNA 352
Query: 332 MTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
+T+ S +SACS L + + S G + D + +LVD+Y+K G ++ A ++F
Sbjct: 353 VTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 412
Query: 392 LRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
++ +D+ +++MI G+ G A +LF +M N+ PN++T+ +++ Y G E
Sbjct: 413 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 452 YWCFNSMKDNGLVPL-VDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLL 507
F M+ +G V + +++ + G DEA EL M PN+ +LL
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 508 AC----------RLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRM 557
AC +H V + H +K + L+ YA G + ++ + +
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVK---------NALTDTYAKSGDIEYSRTIFL 583
Query: 558 GVKGKNVI 565
G++ K++I
Sbjct: 584 GMETKDII 591
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 138/557 (24%), Positives = 248/557 (44%), Gaps = 103/557 (18%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
+ ++ + F+W +I +S++ ++ E L+ M + G+ P L+ CA
Sbjct: 135 RKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANC 194
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
D G IH V LG +C+ V ++L +Y+K G++ A K F M E++V++WNS+L
Sbjct: 195 GDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254
Query: 178 SGYLKAGDLDEAQHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERN 231
Y + G +EA L ++ PG +++WN +I GY++ G D A L QKM
Sbjct: 255 LAYCQNGKHEEAVELVKEMEKEGISPG--LVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 232 LA----SWNTMIAGYIDSGSILSA----REVFDAMPKRNSVSLITMIAG----------- 272
+ +W MI+G I +G A R++F A N+V++++ ++
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGS 372
Query: 273 ------------------------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNS 308
YSK G ++ A K+FD + KD+ ++N+MI Y Q
Sbjct: 373 EVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAG 432
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
+A ELF M + N+ P+ +T ++IS
Sbjct: 433 YCGKAYELFTRM--QDANLRPNIITWNTMISG---------------------------- 462
Query: 369 ATALVDLYAKSGSIDKAYELFHGLRK-----RDLVAYSAMIYGFGINGRASDAIKLFEQM 423
Y K+G +A +LF + K R+ ++ +I G+ NG+ +A++LF +M
Sbjct: 463 -------YIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Query: 424 LGENIGPNLVTYTGILTAYNH---AGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRA 480
PN VT +L A + A +V E + C ++ N L + + D ++
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV--LRRN-LDAIHAVKNALTDTYAKS 572
Query: 481 GWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLS 540
G ++ + + + M T+ + W +L+ LH + +A+ + +K + T +L S
Sbjct: 573 GDIEYSRTIFLGMETK-DIITWNSLIGGYVLHGSYGPA-LALFNQMKTQGITPNRGTLSS 630
Query: 541 SIYAN--LGRWDDAKKL 555
I A+ +G D+ KK+
Sbjct: 631 IILAHGLMGNVDEGKKV 647
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 181/356 (50%), Gaps = 19/356 (5%)
Query: 221 NSLFQKMPERNLASWNTMIAGYIDSGS-----ILSAREVFDAMPKRNSVSLITMIAGYSK 275
+SLFQ+ + +++ ++ IDSGS IL AR F + + +++ Y+K
Sbjct: 70 DSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR--FGLFTEPDVFVETKLLSMYAK 127
Query: 276 SGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
G + A K+FD M E++L +++AMI Y++ ++ +E +LF M+K V PD
Sbjct: 128 CGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD--GVLPDDFLFP 185
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
++ C+ GD+E + I S + G+ ++ +++ +YAK G +D A + F +R+R
Sbjct: 186 KILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER 245
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCF 455
D++A+++++ + NG+ +A++L ++M E I P LVT+ ++ YN G +
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 456 NSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM---PTQPNADVWGALLLACR-- 510
M+ G+ V + M+ L G +A ++ M PNA + + AC
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 511 --LHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNV 564
++ E+ IAV+ D V + L +Y+ G+ +DA+K+ VK K+V
Sbjct: 366 KVINQGSEVHSIAVKMGF---IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 183/413 (44%), Gaps = 60/413 (14%)
Query: 152 MGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGY 211
+G + AR F E +V LLS Y K G + +A+ +FD + +++ +W++MI Y
Sbjct: 99 LGRILHAR--FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAY 156
Query: 212 SKAGNMDQANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI 267
S+ + LF+ M + + + ++ G + G + + + + + K S +
Sbjct: 157 SRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 268 ----TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKP 323
+++A Y+K G++D A K F +M E+D++++N+++ Y QN K +EA+EL M K
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 324 EINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSID 383
I+ P +T +I +QLG + + + FG+ D TA++ +G
Sbjct: 277 GIS--PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 384 KAYELF----------------------------------HGLRKR-----DLVAYSAMI 404
+A ++F H + + D++ ++++
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV 464
+ G+ DA K+F+ + +++ T+ ++T Y AG + Y F M+D L
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDV----YTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINM----PTQPNADVWGALLLACRLHN 513
P + + M+ + G EA +L M Q N W L++A + N
Sbjct: 451 PNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN-LIIAGYIQN 502
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 36/306 (11%)
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSK---PKEALELFNYMLKPEINVHPDKM------- 332
KLF K L+Y +NS PK + ++ K E N+ PD+
Sbjct: 2 EKLFVPSFPKTFLNYQT--PAKVENSPELHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRN 59
Query: 333 --------TLASVISACSQLGDLEHWRWIESHIND------------FGVVL--DDHLAT 370
L S+ S++ + + +ES I+ FG+ D + T
Sbjct: 60 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVET 119
Query: 371 ALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGP 430
L+ +YAK G I A ++F +R+R+L +SAMI + R + KLF M+ + + P
Sbjct: 120 KLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP 179
Query: 431 NLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI 490
+ + IL + G VE G + + G+ + ++ + + G LD A +
Sbjct: 180 DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFF 239
Query: 491 INMPTQPNADVWGALLLA-CRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRW 549
M + + W ++LLA C+ + E E+ + + S + +++L Y LG+
Sbjct: 240 RRM-RERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 550 DDAKKL 555
D A L
Sbjct: 299 DAAMDL 304
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 227/436 (52%), Gaps = 29/436 (6%)
Query: 143 TALLDLYSKMGDVGTARKVFDEMAEKNVVS---WNSLLSGYLKAGDLDEAQHLFDKIPGK 199
+ L+ L+S + ARK+FD++ + ++++ W ++ GY + G P
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGS-----------PRD 219
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP 259
+I + M+ + + GN + +L + ++L G I+ +E
Sbjct: 220 ALIVYVDMLCSFIEPGNFSISVALKACVDLKDLR------VGRGIHAQIVKRKE------ 267
Query: 260 KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNY 319
K + V ++ Y +SG D A K+FD M E++++++N++I+ ++ + E LF
Sbjct: 268 KVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRK 327
Query: 320 MLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
M + I TL +++ ACS++ L + I + I D L +L+D+Y K
Sbjct: 328 MQEEMIGF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 380 GSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
G ++ + +F + +DL +++ M+ + ING + I LFE M+ + P+ +T+ +L
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 440 TAYNHAGLVEEGYWCFNSMKDNGLV-PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPN 498
+ + GL E G F MK V P ++HY +VD+LGRAG + EA ++I MP +P+
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPS 505
Query: 499 ADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMG 558
A +WG+LL +CRLH NV +GEIA + LE G Y ++S+IYA+ WD+ K+R
Sbjct: 506 ASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREM 565
Query: 559 VKGKNVIKTPGCSWTQ 574
+K + V K GCSW Q
Sbjct: 566 MKQRGVKKEAGCSWVQ 581
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 165/374 (44%), Gaps = 53/374 (14%)
Query: 7 TTLMKKC---STLNHAKQIHAHILIN-GLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
T L+ C +L+H +I + IL N L H L I L+ V L+ + +
Sbjct: 135 TDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVT 194
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
+ W + +S+ G +A+ +YV M + P + +IS ALK+C ++D
Sbjct: 195 DSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRV 254
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G IH Q+ V LL LY + G ARKVFD M+E+NVV+WNSL+S K
Sbjct: 255 GRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSK 314
Query: 183 AGDLDEAQHLFDK--------------------------IPGK-------------DVIS 203
+ E +LF K + GK DV
Sbjct: 315 KVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPL 374
Query: 204 WNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR-- 261
NS++ Y K G ++ + +F M ++LASWN M+ Y +G+I +F+ M +
Sbjct: 375 LNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV 434
Query: 262 --NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS-----YNAMIACYAQNSKPKEAL 314
+ ++ + +++G S +G + LF++M + +S Y ++ + K KEA+
Sbjct: 435 APDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAV 494
Query: 315 ELFNYM-LKPEINV 327
++ M KP ++
Sbjct: 495 KVIETMPFKPSASI 508
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 239/475 (50%), Gaps = 13/475 (2%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + NP SW ++R + + G EAV ++ +M + + P +H +SS + +C+R
Sbjct: 219 VFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLA 278
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G IH L V T++ D+Y K + +AR+VFD+ K++ SW S +SG
Sbjct: 279 LEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSG 338
Query: 180 YLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMI 239
Y +G EA+ LFD +P ++++SWN+M+ GY A D+A M + N +
Sbjct: 339 YAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTL 398
Query: 240 AGYIDSGSILSARE--------VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
++ S +S + ++ N + ++ Y K G + SA+ F QM E
Sbjct: 399 VWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSE 458
Query: 292 -KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
+D +S+NA++ A+ + ++AL F M ++ P K TLA++++ C+ + L
Sbjct: 459 LRDEVSWNALLTGVARVGRSEQALSFFEGM---QVEAKPSKYTLATLLAGCANIPALNLG 515
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
+ I + G +D + A+VD+Y+K D A E+F RDL+ ++++I G N
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRN 575
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDH 469
GR+ + +LF + E + P+ VT+ GIL A G VE G+ F+SM + P V+H
Sbjct: 576 GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEH 635
Query: 470 YGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQH 524
Y M++L + G L + E ++ MP P + + AC+ + +LG A +
Sbjct: 636 YDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKR 690
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 229/544 (42%), Gaps = 81/544 (14%)
Query: 9 LMKKCST---LNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L + CS+ + A+++ +H++ L P+F+ + + + + +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVT--FSPLPPIFLLNRAIEAYGKCGCVDD-ARELFEEMP 123
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
D SW VI +Q G E ++ +M R G+ T + + LKSC I D
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
+H V GY V ++T+++D+Y K + AR+VFDE+ + VSWN ++ YL+ G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 186 LDEAQHLFDKI--------------------------PGK-------------DVISWNS 206
DEA +F K+ GK D + S
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 207 MISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSL 266
+ Y K ++ A +F + ++L SW + ++GY SG ARE+FD MP+RN VS
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVS- 362
Query: 267 ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
+NAM+ Y + EAL+ M + N
Sbjct: 363 ------------------------------WNAMLGGYVHAHEWDEALDFLTLMRQEIEN 392
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
+ D +TL +++ CS + D++ + I G + +A AL+D+Y K G++ A
Sbjct: 393 I--DNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSAN 450
Query: 387 ELFHGLRK-RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHA 445
F + + RD V+++A++ G GR+ A+ FE M E P+ T +L +
Sbjct: 451 IWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVE-AKPSKYTLATLLAGCANI 509
Query: 446 GLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGAL 505
+ G + +G V G MVD+ + D A E+ T+ + +W ++
Sbjct: 510 PALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSI 568
Query: 506 LLAC 509
+ C
Sbjct: 569 IRGC 572
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 124/403 (30%), Positives = 214/403 (53%), Gaps = 13/403 (3%)
Query: 183 AGDLDEAQHLFDKIPGKDVIS-WNSMISGYSKAGNMDQANSLFQKM-----PERNLASWN 236
G L AQ LFD S WN +I G+S + + + + +M +L ++N
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 237 TMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK 292
+ SI E+ ++ + +++ +++ YS +G V+ A K+FD+M +
Sbjct: 112 FALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVR 171
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
DL+S+N MI C++ +AL ++ M V D TL +++S+C+ + L
Sbjct: 172 DLVSWNVMICCFSHVGLHNQALSMYKRMGNE--GVCGDSYTLVALLSSCAHVSALNMGVM 229
Query: 353 IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGR 412
+ D ++ AL+D+YAK GS++ A +F+G+RKRD++ +++MI G+G++G
Sbjct: 230 LHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGH 289
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYG 471
+AI F +M+ + PN +T+ G+L +H GLV+EG F M L P V HYG
Sbjct: 290 GVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYG 349
Query: 472 IMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD 531
MVDL GRAG L+ + E+I + +W LL +C++H N+ELGE+A++ ++LE+
Sbjct: 350 CMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAF 409
Query: 532 TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G Y L++SIY+ +R ++ ++ PG SW +
Sbjct: 410 NAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIE 452
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 175/395 (44%), Gaps = 54/395 (13%)
Query: 3 ATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
A + +++ C+++ ++IH+H++INGL H +F H + V+ LSH H
Sbjct: 5 ARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKSCARIQDKL 121
+P + W +IR FS + ++ Y +M + P + ALKSC RI+
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
+ IHG V G+ V T+L+ YS G V A KVFDEM +++VSWN ++ +
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 182 KAGDLDEAQHLFDKIPGKDVIS-------------------------------------- 203
G ++A ++ ++ + V
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVF 244
Query: 204 -WNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM---- 258
N++I Y+K G+++ A +F M +R++ +WN+MI GY G + A F M
Sbjct: 245 VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG 304
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS-----YNAMIACYAQNSKPKEA 313
+ N+++ + ++ G S G V + F+ M + L+ Y M+ Y + + + +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENS 364
Query: 314 LELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
LE+ + H D + +++ +C +LE
Sbjct: 365 LEMIY-----ASSCHEDPVLWRTLLGSCKIHRNLE 394
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 193/347 (55%), Gaps = 8/347 (2%)
Query: 231 NLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+L + NT+I Y I SA ++FD P+R+ V+ +I G K+ ++ A +LFD M
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
+DL+S+N++I+ YAQ + +EA++LF+ M+ + + PD + + S +SAC+Q GD +
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVA--LGLKPDNVAIVSTLSACAQSGDWQKG 268
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
+ I + + +D LAT LVD YAK G ID A E+F + L ++AMI G ++
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDH 469
G + F +M+ I P+ VT+ +L +H+GLV+E F+ M+ + + H
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKH 388
Query: 470 YGIMVDLLGRAGWLDEAYELIINMP----TQPNADVWGALLLACRLHNNVELGEIAVQHC 525
YG M DLLGRAG ++EA E+I MP + W LL CR+H N+E+ E A
Sbjct: 389 YGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRV 448
Query: 526 IKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGV-KGKNVIKTPGCS 571
L + G Y ++ +YAN RW++ K+R + + K V K G S
Sbjct: 449 KALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 208/429 (48%), Gaps = 28/429 (6%)
Query: 9 LMKKCSTLNHAKQIHAHILINGL--HHLEPLFIHHILLWDVNNYKP-------LSHYVHP 59
L+K C TL H Q HA + +G + + + +L+ + + P + Y
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 60 ILHNLHNPDSFSWGCVIRFFS-QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQ 118
+ + NP +F + +IR + + + + +V+M+R + P H K+CA +
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 119 --DKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
D ++H Q G + ++ L+ +YS + + +A ++FDE +++VV++N L
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
+ G +KA ++ A+ LFD +P +D++SWNS+ISGY++ + +A LF +M L N
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDN 249
Query: 237 TMIAGYI----DSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
I + SG + + D ++ +S ++ Y+K G +D+A ++F+
Sbjct: 250 VAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
+K L ++NAMI A + + ++ F M+ I PD +T SV+ CS G ++
Sbjct: 310 CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK--PDGVTFISVLVGCSHSGLVD 367
Query: 349 HWRWIESHIND-FGVVLDDHLATALVDLYAKSGSIDKAYELFH-----GLRKRDLVAYSA 402
R + + + V + + DL ++G I++A E+ G + L+A+S
Sbjct: 368 EARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSG 427
Query: 403 MIYGFGING 411
++ G I+G
Sbjct: 428 LLGGCRIHG 436
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 234/438 (53%), Gaps = 22/438 (5%)
Query: 155 VGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI------PGKDVISWNSMI 208
+ A KVFDE+ E +V+S +++ ++K EA F ++ P + ++ ++I
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE--FTFGTVI 100
Query: 209 SGYSKAGNMDQANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKRNSV 264
+ + ++ L + LAS + ++ Y+ ++ AR FD N V
Sbjct: 101 GSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVV 160
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
S+ +I+GY K + + A LF M E+ ++++NA+I ++Q + +EA+ F ML+
Sbjct: 161 SITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREG 220
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIES-HINDFGVVLDDHLATALVDLYAKSGSID 383
+ V P++ T I+A S + + I + I G + + +L+ Y+K G+++
Sbjct: 221 V-VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 384 KAYELFHGLR--KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE-NIGPNLVTYTGILT 440
+ F+ L +R++V++++MI+G+ NGR +A+ +FE+M+ + N+ PN VT G+L
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 441 AYNHAGLVEEGYWCFNSM----KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ 496
A NHAGL++EGY FN D L+ L +HY MVD+L R+G EA ELI +MP
Sbjct: 340 ACNHAGLIQEGYMYFNKAVNDYDDPNLLEL-EHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 497 PNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLR 556
P W ALL C++H+N L ++A ++L+ V Y +LS+ Y+ + W + +R
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 557 MGVKGKNVIKTPGCSWTQ 574
+K + + GCSW +
Sbjct: 459 RKMKETGLKRFTGCSWIE 476
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 188/351 (53%), Gaps = 18/351 (5%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
H + + D S VI F ++ + +EA + ++ +G+ P + + S
Sbjct: 47 HKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTS 106
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
+D G +H +G + V+V +A+L+ Y K+ + AR+ FD+ + NVVS +L+
Sbjct: 107 RDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLI 166
Query: 178 SGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER-----NL 232
SGYLK + +EA LF +P + V++WN++I G+S+ G ++A + F M N
Sbjct: 167 SGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNE 226
Query: 233 ASWNTMIAGYIDSGSILSAREV----FDAMPKRNSVSL-ITMIAGYSKSGDVDSAHKLFD 287
+++ I + S + + + + KR +V + ++I+ YSK G+++ + F+
Sbjct: 227 STFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFN 286
Query: 288 QMDE--KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
+++E ++++S+N+MI YA N + +EA+ +F M+K + N+ P+ +T+ V+ AC+ G
Sbjct: 287 KLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVK-DTNLRPNNVTILGVLFACNHAG 345
Query: 346 DL-EHWRWIESHINDF---GVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
+ E + + +ND+ ++ +H A +VD+ ++SG +A EL +
Sbjct: 346 LIQEGYMYFNKAVNDYDDPNLLELEHYA-CMVDMLSRSGRFKEAEELIKSM 395
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 43/331 (12%)
Query: 220 ANSLFQKMPERNLASWNTM--IAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
AN+L K P N++ + +IDS I +A +VFD +P+ + +S +I + K
Sbjct: 20 ANALVTKSP-------NSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKES 72
Query: 278 DVDSAHKLFDQM----DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
A + F ++ + ++ +I + K +L Y LK + + +
Sbjct: 73 RHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALK--MGLASNVFV 130
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
++V++ +L L R D VV T L+ Y K ++A LF +
Sbjct: 131 GSAVLNCYVKLSTLTDARRCFDDTRDPNVV----SITNLISGYLKKHEFEEALSLFRAMP 186
Query: 394 KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG-PNLVTYTGILTAYN--------- 443
+R +V ++A+I GF GR +A+ F ML E + PN T+ +TA +
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 444 --HAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADV 501
HA ++ FN N L+ G M D L L+E I++ N+ +
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSW----NSMI 302
Query: 502 WGALLLACRLHNNVELGEIAVQHCIKLESDT 532
WG HN GE AV K+ DT
Sbjct: 303 WGY------AHNG--RGEEAVAMFEKMVKDT 325
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 211/399 (52%), Gaps = 18/399 (4%)
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQA----NSLFQKMPERNLASWNTMIAG 241
++ A +F I +N+MI GY + ++A N + Q+ E + ++ ++
Sbjct: 82 MNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 242 YIDSGSILSARE----VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
SI ++ VF + + ++I Y + G+++ + +F++++ K S+
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE--- 354
++M++ A E L LF M E N+ ++ + S + AC+ G L I
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMC-SETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 355 -SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
+I++ +++ T+LVD+Y K G +DKA +F + KR+ + YSAMI G ++G
Sbjct: 261 LRNISELNIIVQ----TSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEG 316
Query: 414 SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV-PLVDHYGI 472
A+++F +M+ E + P+ V Y +L A +H+GLV+EG F M G V P +HYG
Sbjct: 317 ESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC 376
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDT 532
+VDLLGRAG L+EA E I ++P + N +W L CR+ N+ELG+IA Q +KL S
Sbjct: 377 LVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHN 436
Query: 533 VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
G Y L+S++Y+ WDD + R + K + +TPG S
Sbjct: 437 PGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 182/404 (45%), Gaps = 48/404 (11%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNN-YKPLSHYVHPILHNLHNP 67
L+K+C ++ KQ+HA + L + +L ++ ++ +Y I + +P
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGIDDP 95
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
+F + +IR + F EA+ Y +M + G P + LK+C R++ G IH
Sbjct: 96 CTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH 155
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
GQV LG + V+VQ +L+++Y + G++ + VF+++ K SW+S++S G
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 188 EAQHLFDKIPGKDVI--SWNSMISGYSKAGNMDQAN-------SLFQKMPERNLASWNTM 238
E LF + + + + M+S N N L + + E N+ ++
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 239 IAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYN 298
+ Y+ G + A +F M KRN+++ MI+G + G+ +SA ++F +M
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM--------- 326
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
KE LE PD + SV++ACS G ++ R + + +
Sbjct: 327 -----------IKEGLE-------------PDHVVYVSVLNACSHSGLVKEGRRVFAEML 362
Query: 359 DFGVV--LDDHLATALVDLYAKSGSIDKAYELFHG--LRKRDLV 398
G V +H LVDL ++G +++A E + K D++
Sbjct: 363 KEGKVEPTAEHYG-CLVDLLGRAGLLEEALETIQSIPIEKNDVI 405
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 180/306 (58%), Gaps = 3/306 (0%)
Query: 267 ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
+ ++ Y+ SGD+ +A LF + +DL+ +NAMI+ Y Q +E L ++ M + I
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV 206
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
PD+ T ASV ACS L LEH + + + + + + +ALVD+Y K S +
Sbjct: 207 --PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGH 264
Query: 387 ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
+F L R+++ ++++I G+G +G+ S+ +K FE+M E PN VT+ +LTA NH G
Sbjct: 265 RVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGG 324
Query: 447 LVEEGYWCFNSMK-DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGAL 505
LV++G+ F SMK D G+ P HY MVD LGRAG L EAYE ++ P + + VWG+L
Sbjct: 325 LVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSL 384
Query: 506 LLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI 565
L ACR+H NV+L E+A ++L+ G Y + ++ YA+ G + A K+R ++ V
Sbjct: 385 LGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVK 444
Query: 566 KTPGCS 571
K PG S
Sbjct: 445 KDPGYS 450
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 129/296 (43%), Gaps = 44/296 (14%)
Query: 102 PTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKV 161
P ++A+ L+ C + ++ G IH Q+ V+G+ Y++ LL LY+ GD+ TA +
Sbjct: 108 PETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGIL 165
Query: 162 FDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVI----SWNSMISGYSKAGNM 217
F + ++++ WN+++SGY++ G E ++ + ++ ++ S+ S +
Sbjct: 166 FRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRL 225
Query: 218 DQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGY 273
+ M +R N+ + ++ Y S VFD + RN ++ ++I+GY
Sbjct: 226 EHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGY 285
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
G V K F++M E+ P+ +T
Sbjct: 286 GYHGKVSEVLKCFEKMKEE---------------------------------GCRPNPVT 312
Query: 334 LASVISACSQLGDLEH-WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
V++AC+ G ++ W S D+G+ + A+VD ++G + +AYE
Sbjct: 313 FLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEF 368
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 6/191 (3%)
Query: 9 LMKKCSTLNH---AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L+++C K+IHA + + G E L + ++L+ ++ + + +L
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGI---LFRSLK 170
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
D W +I + QKG E + +Y M++ + P + +S ++C+ + G
Sbjct: 171 IRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKR 230
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
H + + + V +AL+D+Y K +VFD+++ +NV++W SL+SGY G
Sbjct: 231 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Query: 186 LDEAQHLFDKI 196
+ E F+K+
Sbjct: 291 VSEVLKCFEKM 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
+ V P+ T A ++ C Q + + I + + G L+++L L+ LYA SG +
Sbjct: 104 LQVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 385 AYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNH 444
A LF L+ RDL+ ++AMI G+ G + + ++ M I P+ T+ + A +
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSA 221
Query: 445 AGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGA 504
+E G M + + +VD+ + + + + + T+ N W +
Sbjct: 222 LDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITWTS 280
Query: 505 LLLACRLHNNV 515
L+ H V
Sbjct: 281 LISGYGYHGKV 291
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 200/348 (57%), Gaps = 6/348 (1%)
Query: 229 ERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQ 288
E ++ ++ Y+ G+++ A +VFD MP+RN V+ MI G + GD + A ++
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
M + ++S+ +I YA+ KPKEA+ LF+ M+ + + P+++T+ +++ A LGDL+
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDA-IKPNEITILAILPAVWNLGDLK 273
Query: 349 HWRWIESHINDFGVV-LDDHLATALVDLYAKSGSIDKAYELFHGLR--KRDLVAYSAMIY 405
+ +++ G V D + +L+D YAK G I A++ F + +++LV+++ MI
Sbjct: 274 MCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMIS 333
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW-CFNSM-KDNGL 463
F I+G +A+ +F+ M + PN VT +L A +H GL EE + FN+M + +
Sbjct: 334 AFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKI 393
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQ 523
P V HYG +VD+L R G L+EA ++ + +P + A VW LL AC ++++ EL E +
Sbjct: 394 TPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTR 453
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
++LE G Y L+S+I+ GR+ DA++ R + + V K PG S
Sbjct: 454 KLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 147/270 (54%), Gaps = 16/270 (5%)
Query: 133 LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHL 192
LG+++ VYVQTAL+ +Y G++ A KVFDEM E+N V+WN +++G GD ++A
Sbjct: 152 LGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCF 211
Query: 193 FDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN-----TMIAGYIDSGS 247
+K+P + V+SW ++I GY++ +A LF +M + N ++ + G
Sbjct: 212 LEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGD 271
Query: 248 ILSAREVFDAMPKRNSVSLI-----TMIAGYSKSGDVDSAHKLFDQMD--EKDLLSYNAM 300
+ V + KR V ++I Y+K G + SA K F ++ K+L+S+ M
Sbjct: 272 LKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ--LGDLEHWRWIESHIN 358
I+ +A + KEA+ +F M + + + P+++T+ SV++ACS L + E + + +N
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMER--LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 389
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
++ + D LVD+ + G +++A ++
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 217/417 (52%), Gaps = 49/417 (11%)
Query: 201 VISWNSMISGYSKAGNMDQANSLFQKM------P----------ERNLASWNTMIAGYID 244
+IS +S Y+ GN +QA +LF +M P + A++ ++ G +
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 245 SGSILS------------------------AREVFDAMPKRNSVSLITMIAGYSKSGDVD 280
+ S+ S AR++FD +P+RN+V MI+ Y+ G V
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 281 SAHKLFDQMD-EKDLLSYNAMI-ACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
A +L++ MD + S+NA+I A+E + M+ E P+ +TL +++
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMI--EFRFKPNLITLLALV 189
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLDDH--LATALVDLYAKSGSIDKAYELFHGLRKRD 396
SACS +G + I S+ F +++ H L + LV+ Y + GSI +F + RD
Sbjct: 190 SACSAIGAFRLIKEIHSYA--FRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 397 LVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
+VA+S++I + ++G A A+K F++M + P+ + + +L A +HAGL +E F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 457 SMK-DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNV 515
M+ D GL DHY +VD+L R G +EAY++I MP +P A WGALL ACR + +
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 516 ELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
EL EIA + + +E + Y LL IY ++GR ++A++LR+ +K V +PG SW
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 165/337 (48%), Gaps = 30/337 (8%)
Query: 79 FSQKGQFIEAVSLYVQMQRMGLCPT-SHAISSALKSCARIQDKLGGVSIHGQVHVLGYDT 137
++ +G +A++L++QM P +H S ALKSCA + G S+H + +
Sbjct: 22 YANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLS 81
Query: 138 CVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF---D 194
+V ALLD+Y K V ARK+FDE+ ++N V WN+++S Y G + EA L+ D
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 195 KIPGKDVISWNSMISGYSKAGNMD---QANSLFQKMPERNLASWNTMIAGYIDSGSILSA 251
+P + S+N++I G G D +A ++KM E + + + S + A
Sbjct: 142 VMPNES--SFNAIIKGL--VGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 252 ------------REVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNA 299
R + + P+ S ++ Y + G + +FD M+++D++++++
Sbjct: 198 FRLIKEIHSYAFRNLIEPHPQLKS----GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSS 253
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWRWIESHIN 358
+I+ YA + + AL+ F M ++ PD + +V+ ACS G E + +
Sbjct: 254 LISAYALHGDAESALKTFQEMELAKVT--PDDIAFLNVLKACSHAGLADEALVYFKRMQG 311
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
D+G+ + LVD+ ++ G ++AY++ + ++
Sbjct: 312 DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK 348
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 119/289 (41%), Gaps = 49/289 (16%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD-KLGGVSIHGQV 130
W +I ++ G+ EAV LY M M P + ++ +K +D + + ++
Sbjct: 117 WNAMISHYTHCGKVKEAVELYEAMDVM---PNESSFNAIIKGLVGTEDGSYRAIEFYRKM 173
Query: 131 HVLGYDTCVYVQTALLDLYSKMGDVGTARKV----FDEMAEKNVVSWNSLLSGYLKAGDL 186
+ + AL+ S +G +++ F + E + + L+ Y + G +
Sbjct: 174 IEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSI 233
Query: 187 DEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG 246
Q +FD + +DV++W+S+IS Y+ G+ + A FQ+M
Sbjct: 234 VYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEM------------------- 274
Query: 247 SILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD-------EKDLLSYNA 299
E+ P + ++ + ++ S +G D A F +M KD Y+
Sbjct: 275 ------ELAKVTP--DDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD--HYSC 324
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
++ ++ + +EA ++ M PE P T +++ AC G++E
Sbjct: 325 LVDVLSRVGRFEEAYKVIQAM--PE---KPTAKTWGALLGACRNYGEIE 368
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/617 (24%), Positives = 274/617 (44%), Gaps = 87/617 (14%)
Query: 18 HAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIR 77
+Q+ H+ +GL +++ LL ++ K + + D+ W +I
Sbjct: 68 QVEQVQTHLTKSGLDRF--VYVKTSLL-NLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 78 FFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDT 137
+S+ G +A L++ M + G P++ + + L C + G S+HG G +
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 138 CVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP 197
V+ AL+ YSK ++G+A +F EM +K+ VSWN+++ Y ++G +EA +F +
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 198 GK---------------------------------DVISWNSMISGYSKAGNMDQANSLF 224
K D+ S++ YS+ G + A L+
Sbjct: 245 EKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304
Query: 225 QKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVD 280
+ ++ ++++ Y + G + A F K ++V+L+ ++ G KS +D
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 281 SAHKLFDQMDEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
L + L L N +I Y++ + L LF + + + ++ S
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPL------ISWNS 418
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHL---------------------------- 368
VIS C Q G + + G +L D +
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN 478
Query: 369 --------ATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
TAL+D+YAK G+ +A +F ++ +++MI G+ ++G A+ +
Sbjct: 479 NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCY 538
Query: 421 EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGR 479
+M + + P+ +T+ G+L+A NH G V+EG CF +M K+ G+ P + HY +MV LLGR
Sbjct: 539 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 598
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
A EA LI M +P++ VWGALL AC +H +E+GE + L+ G Y L+
Sbjct: 599 ACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLM 658
Query: 540 SSIYANLGRWDDAKKLR 556
S++YA WDD ++R
Sbjct: 659 SNLYATEAMWDDVVRVR 675
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 211/498 (42%), Gaps = 88/498 (17%)
Query: 89 VSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL--GYDTCVYVQTALL 146
++++ + R L P +S L++ + Q H+ G D VYV+T+LL
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 147 DLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY----------------LKAGDLDEAQ 190
+LY K G V +A+ +FDEM E++ V WN+L+ GY L+ G A
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 191 HLFDKIP----------GKDVISW-------------NSMISGYSKAGNMDQANSLFQKM 227
L + +P G+ V N++IS YSK + A LF++M
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREM 212
Query: 228 PERNLASWNTMIAGYIDSGSILSAREVFDAMPKR-------------------------- 261
+++ SWNTMI Y SG A VF M ++
Sbjct: 213 KDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLV 272
Query: 262 ------NSVSLIT-MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEAL 314
N +S++T ++ YS+ G + SA +L+ + ++ ++++CYA+ A+
Sbjct: 273 VKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAV 332
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVD 374
F+ ++ + D + L ++ C + ++ + + G+ + L+
Sbjct: 333 VYFSK--TRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLIT 390
Query: 375 LYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQ-MLGENIGPNLV 433
+Y+K ++ LF L++ L++++++I G +GRAS A ++F Q ML + P+ +
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 434 TYTGILTAYNHAGLVE-----EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYE 488
T +L + + GY N+ ++ V ++D+ + G +A E
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTA-----LIDMYAKCGNEVQA-E 504
Query: 489 LIINMPTQPNADVWGALL 506
+ P W +++
Sbjct: 505 SVFKSIKAPCTATWNSMI 522
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 4/162 (2%)
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS-QLGDLE-H 349
+DL +++++ + +F +L+ + P+ T++ + A + +
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLT--PNHFTMSIFLQATTTSFNSFKLQ 68
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
+++H+ G+ ++ T+L++LY K G + A LF + +RD V ++A+I G+
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
NG DA KLF ML + P+ T +L G V +G
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 134/520 (25%), Positives = 254/520 (48%), Gaps = 50/520 (9%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D W ++ + + G F +++ L M+ G P ++ +ALK+ + +H
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVH 270
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
GQ+ Y V LL LY+++GD +
Sbjct: 271 GQILKTCYVLDPRVGVGLLQLYTQLGD-------------------------------MS 299
Query: 188 EAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGS 247
+A +F+++P DV+ W+ MI+ + + G ++A LF +M E + ++ ++ +
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Query: 248 I------------LSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
I L + FD + S +LI + Y+K +D+A KLF ++ K+ +
Sbjct: 360 IGKCSGLGEQLHGLVVKVGFD-LDIYVSNALIDV---YAKCEKMDTAVKLFAELSSKNEV 415
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
S+N +I Y + +A +F L+ +++V ++T +S + AC+ L ++ +
Sbjct: 416 SWNTVIVGYENLGEGGKAFSMFREALRNQVSV--TEVTFSSALGACASLASMDLGVQVHG 473
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASD 415
++ +L+D+YAK G I A +F+ + D+ +++A+I G+ +G
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQ 533
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMV 474
A+++ + M + PN +T+ G+L+ ++AGL+++G CF SM +D+G+ P ++HY MV
Sbjct: 534 ALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMV 593
Query: 475 DLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVG 534
LLGR+G LD+A +LI +P +P+ +W A+L A NN E + + +K+
Sbjct: 594 RLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEA 653
Query: 535 YYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
Y L+S++YA +W + +R +K V K PG SW +
Sbjct: 654 TYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 53/340 (15%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ + + D W +I F Q G EAV L+++M+ + P +SS L CA +
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G +HG V +G+D +YV AL+D+Y+K + TA K+F E++ KN VSWN+++ G
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 180 YLKAGDLDEAQHLFDKI---------------------------------------PGKD 200
Y G+ +A +F + K
Sbjct: 424 YENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKK 483
Query: 201 VISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK 260
V NS+I Y+K G++ A S+F +M ++ASWN +I+GY G A + D M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 261 R----NSVSLITMIAGYSKSGDVDSAHKLFDQM-----DEKDLLSYNAMIACYAQNSKPK 311
R N ++ + +++G S +G +D + F+ M E L Y M+ ++ +
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+A++L I P M +++SA + E R
Sbjct: 604 KAMKLIE-----GIPYEPSVMIWRAMLSASMNQNNEEFAR 638
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 156/342 (45%), Gaps = 37/342 (10%)
Query: 104 SHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFD 163
SHA + L+ C + D + +IH +L +C LDL++
Sbjct: 49 SHAYGAMLRRCIQKNDPISAKAIH--CDILKKGSC-------LDLFAT------------ 87
Query: 164 EMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSL 223
N LL+ Y+KAG +A +LFD++P ++ +S+ ++ GY+ + + L
Sbjct: 88 ----------NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRL 137
Query: 224 FQKMPERNLASWNTMIAGYI--DSGSILS--AREVFDAMPKRNSVSLITMIAGYSKSGDV 279
++ E N + + + ++ D I + N+ +I YS G V
Sbjct: 138 HREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSV 197
Query: 280 DSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVIS 339
DSA +F+ + KD++ + +++CY +N +++L+L + M P+ T + +
Sbjct: 198 DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA--GFMPNNYTFDTALK 255
Query: 340 ACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA 399
A LG + + + I VLD + L+ LY + G + A+++F+ + K D+V
Sbjct: 256 ASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP 315
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
+S MI F NG ++A+ LF +M + PN T + IL
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 156/382 (40%), Gaps = 53/382 (13%)
Query: 227 MPERNLASWNTMIAGYIDSGSILSAREV-FDAMPKRNSVSLIT---MIAGYSKSGDVDSA 282
+P + ++ M+ I +SA+ + D + K + + L ++ Y K+G A
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
LFD+M E++ +S+ + AQ ++ + L++ + + ++P T S +
Sbjct: 104 LNLFDEMPERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFT--SFLKLFV 157
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSA 402
L E W+ S I G + + AL++ Y+ GS+D A +F G+ +D+V ++
Sbjct: 158 SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAG 217
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTY--------------------------- 435
++ + NG D++KL M PN T+
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 436 --------TGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAY 487
G+L Y G + + + FN M N +VP + M+ + G+ +EA
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP----WSFMIARFCQNGFCNEAV 333
Query: 488 ELIINMPTQ---PNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYS-LLSSIY 543
+L I M PN ++L C + LGE +K+ D Y S L +Y
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 544 ANLGRWDDAKKLRMGVKGKNVI 565
A + D A KL + KN +
Sbjct: 394 AKCEKMDTAVKLFAELSSKNEV 415
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/439 (29%), Positives = 219/439 (49%), Gaps = 43/439 (9%)
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
+S Y K GD A ++ ++ K+ +S N +I+GY +AG++ A +F +MP+R L +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 237 TMIAGYID--------------SGSILSARE-----VFDAMPKRNSVSLITMIAGYS--- 274
MIAG I G S E VF SVS+ I GY+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 275 -----------------KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELF 317
++G + + M ++L+++N +I AQN P+ L L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
M P+K+T +V+S+CS L + I + G + ++L+ +Y+
Sbjct: 181 KMMKIS--GCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYS 238
Query: 378 KSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE-NIGPNLVTYT 436
K G + A + F D V +S+MI +G +G+ +AI+LF M + N+ N V +
Sbjct: 239 KCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFL 298
Query: 437 GILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT 495
+L A +H+GL ++G F+ M + G P + HY +VDLLGRAG LD+A +I +MP
Sbjct: 299 NLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPI 358
Query: 496 QPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
+ + +W LL AC +H N E+ + + ++++ + Y LL++++A+ RW D ++
Sbjct: 359 KTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEV 418
Query: 556 RMGVKGKNVIKTPGCSWTQ 574
R ++ KNV K G SW +
Sbjct: 419 RKSMRDKNVKKEAGISWFE 437
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 173/397 (43%), Gaps = 87/397 (21%)
Query: 115 ARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
+++ D V+++G++ Y + L++ Y + GD+ ARKVFDEM ++ + +WN
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 175 SLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISG-------------------- 210
++++G ++ +E LF ++ G D + S+ SG
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 211 ---------------YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVF 255
Y + G + + + MP RNL +WNT+I G +G + ++
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 256 DAMP----KRNSVSLIT-----------------------------------MIAGYSKS 276
M + N ++ +T +I+ YSK
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 277 GDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
G + A K F + +++D + +++MI+ Y + + EA+ELFN M + + N+ +++ +
Sbjct: 241 GCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAE-QTNMEINEVAFLN 299
Query: 337 VISACSQLGDLEH-WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-K 394
++ ACS G + + + +G T +VDL ++G +D+A + + K
Sbjct: 300 LLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPN 431
D+V + ++ I+ A A ++F+++L I PN
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEIL--QIDPN 394
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 122/264 (46%), Gaps = 14/264 (5%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQV 130
+W +I +Q G + LY M+ G P + L SC+ + + G IH +
Sbjct: 159 AWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEA 218
Query: 131 HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQ 190
+G + V V ++L+ +YSK G +G A K F E +++ V W+S++S Y G DEA
Sbjct: 219 IKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAI 278
Query: 191 HLFDKIPGK-----DVISWNSMISGYSKAGNMDQANSLFQKMPER-----NLASWNTMIA 240
LF+ + + + +++ +++ S +G D+ LF M E+ L + ++
Sbjct: 279 ELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVD 338
Query: 241 GYIDSGSILSAREVFDAMPKRNSVSL-ITMIAGYSKSGDVDSAHKLFD---QMDEKDLLS 296
+G + A + +MP + + + T+++ + + + A ++F Q+D D
Sbjct: 339 LLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSAC 398
Query: 297 YNAMIACYAQNSKPKEALELFNYM 320
Y + +A + ++ E+ M
Sbjct: 399 YVLLANVHASAKRWRDVSEVRKSM 422
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 182/320 (56%), Gaps = 15/320 (4%)
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ-----NSKPKEALELFNYMLK 322
T++ Y+K+GD+ A K+FD+M E+ +++NAMI Y N ++A+ LF
Sbjct: 152 TLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSC 211
Query: 323 PEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV--LDDHLATALVDLYAKSG 380
V P T+ V+SA SQ G LE + +I G +D + TALVD+Y+K G
Sbjct: 212 CGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCG 271
Query: 381 SIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
++ A+ +F ++ +++ +++M G +NGR ++ L +M I PN +T+T +L+
Sbjct: 272 CLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLS 331
Query: 441 AYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNA 499
AY H GLVEEG F SMK G+ P+++HYG +VDLLG+AG + EAY+ I+ MP +P+A
Sbjct: 332 AYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDA 391
Query: 500 DVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGY-------YSLLSSIYANLGRWDDA 552
+ +L AC ++ +GE + +++E + Y LS++ A+ G+W +
Sbjct: 392 ILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEV 451
Query: 553 KKLRMGVKGKNVIKTPGCSW 572
+KLR +K + + PG S+
Sbjct: 452 EKLRKEMKERRIKTRPGYSF 471
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 190/450 (42%), Gaps = 64/450 (14%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHH---LEPLFIHHILLWDVNNYKPLSHYVHPILH 62
L+ L + TL AKQIHA ++ING H L H+ + L+H + +
Sbjct: 11 LSLLQQNSKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLL--VFP 68
Query: 63 NLHNPDSFSWGCV---------IRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
+PD F + + IR F+ + SL +R + SA S
Sbjct: 69 RFGHPDKFLFNTLLKCSKPEDSIRIFAN---YASKSSLLYLNERTFVFVLGACARSASSS 125
Query: 114 CARIQDKLGGVSIHGQVHVLGY-DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVS 172
R+ G +HG V LG+ + T LL Y+K GD+ ARKVFDEM E+ V+
Sbjct: 126 ALRV-----GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVT 180
Query: 173 WNSLLSGYLKAGD-----LDEAQHLFDKIP--GKDVISWNSMISGYSKAGNMDQANSLFQ 225
WN+++ GY D +A LF + G V ++ + +
Sbjct: 181 WNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMV------------CVLS 228
Query: 226 KMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKL 285
+ + L +++ GYI+ +VF +L+ M YSK G +++A +
Sbjct: 229 AISQTGLLEIGSLVHGYIEKLGFTPEVDVFIG------TALVDM---YSKCGCLNNAFSV 279
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
F+ M K++ ++ +M A N + E L N M E + P+++T S++SA +G
Sbjct: 280 FELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM--AESGIKPNEITFTSLLSAYRHIG 337
Query: 346 DLEHW-RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAM 403
+E +S FGV +VDL K+G I +AY+ + K D + ++
Sbjct: 338 LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLV 433
I G E ++GE IG L+
Sbjct: 398 CNACSIYG---------ETVMGEEIGKALL 418
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 175/310 (56%), Gaps = 11/310 (3%)
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
I Y K+G+ ++A K+FD+ E+ L S+NA+I + EA+E+F M + +
Sbjct: 158 FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS--GLE 215
Query: 329 PDKMTLASVISACSQLGDLE-----HWRWIESHINDFGVVLDDHLATALVDLYAKSGSID 383
PD T+ SV ++C LGDL H +++ + D + +L+D+Y K G +D
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKS---DIMMLNSLIDMYGKCGRMD 272
Query: 384 KAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYN 443
A +F +R+R++V++S+MI G+ NG +A++ F QM + PN +T+ G+L+A
Sbjct: 273 LASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACV 332
Query: 444 HAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVW 502
H GLVEEG F MK L P + HYG +VDLL R G L EA +++ MP +PN VW
Sbjct: 333 HGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVW 392
Query: 503 GALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGK 562
G L+ C +VE+ E + ++LE G Y +L+++YA G W D +++R +K K
Sbjct: 393 GCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTK 452
Query: 563 NVIKTPGCSW 572
V K P S+
Sbjct: 453 KVAKIPAYSY 462
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 190/449 (42%), Gaps = 90/449 (20%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L TL+ C++L ++IH D+ + L Y
Sbjct: 50 LATLLSNCTSLARVRRIHG---------------------DIFRSRILDQY--------- 79
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
P +F W ++R + + ++A+ +Y+ M R + P +++ +K+ +I D G
Sbjct: 80 -PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKE 138
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
+H LG+ + ++ + LY K G+ ARKVFDE E+ + SWN+++ G AG
Sbjct: 139 LHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGR 198
Query: 186 LDEAQHLFDKIP-----------------------------------------GKDVISW 204
+EA +F + D++
Sbjct: 199 ANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMML 258
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMP----K 260
NS+I Y K G MD A+ +F++M +RN+ SW++MI GY +G+ L A E F M +
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 261 RNSVSLITMIAGYSKSGDVDSAHKLFDQMD-----EKDLLSYNAMIACYAQNSKPKEALE 315
N ++ + +++ G V+ F M E L Y ++ +++ + KEA +
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 316 LFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDL 375
+ E+ + P+ M ++ C + GD+E W+ ++ + +D + L ++
Sbjct: 379 VVE-----EMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELE-PWNDGVYVVLANV 432
Query: 376 YAKSG---SIDKAYELFHGLRKRDLVAYS 401
YA G +++ +L + + AYS
Sbjct: 433 YALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 121/268 (45%), Gaps = 15/268 (5%)
Query: 250 SAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAH------KLFDQMDEKDLLSYNAMIAC 303
S+ V P+ + L T+++ + V H ++ DQ L +N ++
Sbjct: 34 SSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFL--WNNIMRS 91
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
Y ++ P +A++++ M++ V PD+ +L VI A Q+ D + + S G V
Sbjct: 92 YIRHESPLDAIQVYLGMVRS--TVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFV 149
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
D+ + + LY K+G + A ++F +R L +++A+I G GRA++A+++F M
Sbjct: 150 GDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDM 209
Query: 424 LGENIGPN---LVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRA 480
+ P+ +V+ T L + + C K ++ ++D+ G+
Sbjct: 210 KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIM-MLNSLIDMYGKC 268
Query: 481 GWLDEAYELIINMPTQPNADVWGALLLA 508
G +D A + M Q N W ++++
Sbjct: 269 GRMDLASHIFEEM-RQRNVVSWSSMIVG 295
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/573 (25%), Positives = 282/573 (49%), Gaps = 30/573 (5%)
Query: 21 QIHAHILINGLHHLEPLFIHHIL--LWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRF 78
QIH I+ +G L +F+ + L L+D ++ V + + D SW V+
Sbjct: 202 QIHGLIVKSGF--LNSVFVSNSLMSLYDKDSGSSCDD-VLKLFDEIPQRDVASWNTVVSS 258
Query: 79 FSQKGQFIEAVSLYVQMQRM-GLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDT 137
++G+ +A L+ +M R+ G S +S+ L SC L G +HG+ +G
Sbjct: 259 LVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQ 318
Query: 138 CVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP 197
+ V AL+ YSK D+ +++ M ++ V++ +++ Y+ G +D A +F +
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVT 378
Query: 198 GKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFD- 256
K+ I++N++++G+ + G+ +A LF M +R + + + +D+ ++S ++V +
Sbjct: 379 EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 257 ----------AMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQ----MDEKDLLSYNAMIA 302
A +L+ M + D A ++FDQ +D + ++I
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMAD---AEEMFDQWPSNLDSSK--ATTSIIG 493
Query: 303 CYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGV 362
YA+N P +A+ LF+ L E + D+++L +++ C LG E I + G
Sbjct: 494 GYARNGLPDKAVSLFHRTL-CEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGY 552
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQ 422
D L +L+ +YAK D A ++F+ +R+ D+++++++I + + +A+ L+ +
Sbjct: 553 FSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSR 612
Query: 423 MLGENIGPNLVTYTGILTA--YNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGR 479
M + I P+++T T +++A Y + + F SMK + P +HY V +LG
Sbjct: 613 MNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGH 672
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
G L+EA + I +MP QP V ALL +CR+H+N + + + + + +T Y L
Sbjct: 673 WGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILK 732
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
S+IY+ G W ++ +R ++ + K P SW
Sbjct: 733 SNIYSASGFWHRSEMIREEMRERGYRKHPAKSW 765
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 159/351 (45%), Gaps = 49/351 (13%)
Query: 145 LLDLYSKMGDVGTARKV---FDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV 201
LL L ++ DV + V F ++ E+ N+L+S YLK G EA +F + V
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTV 145
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAR-----EVFD 256
+S+ ++ISG+S+ +A +F +M + L N I + + +R ++
Sbjct: 146 VSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHG 205
Query: 257 AMPKR---NSVSLI-TMIAGYSKS--GDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKP 310
+ K NSV + ++++ Y K D KLFD++ ++D+ S+N +++ + K
Sbjct: 206 LIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKS 265
Query: 311 KEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLAT 370
+A +LF M + E D TL++++S+C+ L R + G++ + +
Sbjct: 266 HKAFDLFYEMNRVE-GFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNN 324
Query: 371 ALVDLYAK-------------------------------SGSIDKAYELFHGLRKRDLVA 399
AL+ Y+K G +D A E+F + +++ +
Sbjct: 325 ALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTIT 384
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEE 450
Y+A++ GF NG A+KLF ML + +T + +A + GLV E
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVE---LTDFSLTSAVDACGLVSE 432
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 251/522 (48%), Gaps = 56/522 (10%)
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
N+ + D SW +I + Q GQ EA+SL+ M R+ + P + ++S L+ CA +
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G SIH Y+ D+ E + + +++S Y K
Sbjct: 420 GKSIH--------------------CYAIKADI-----------ESELETATAVISMYAK 448
Query: 183 AGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGY 242
G A F+++P KD +++N++ GY++ G+ ++A +++ M + + + G
Sbjct: 449 CGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGM 508
Query: 243 IDSGSILS--ARE--VFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMD-EKD 293
+ + + S AR V+ + K S +I ++K + +A LFD+ EK
Sbjct: 509 LQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKS 568
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
+S+N M+ Y + + +EA+ F M K E P+ +T +++ A ++L L +
Sbjct: 569 TVSWNIMMNGYLLHGQAEEAVATFRQM-KVE-KFQPNAVTFVNIVRAAAELSALRVGMSV 626
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRA 413
S + G + +LVD+YAK G I+ + + F + + +V+++ M+ + +G A
Sbjct: 627 HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLA 686
Query: 414 SDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPL-VDHYGI 472
S A+ LF M + P+ V++ +L+A HAGLVEEG F M + + V+HY
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYAC 746
Query: 473 MVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDT 532
MVDLLG+AG EA E++ M + + VWGALL + R+H N+ L A+ +KLE
Sbjct: 747 MVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLN 806
Query: 533 VGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
+YS LG ++ +++ K P CSW +
Sbjct: 807 PSHYSQDR----RLGEVNNVSRIK---------KVPACSWIE 835
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/519 (26%), Positives = 247/519 (47%), Gaps = 98/519 (18%)
Query: 4 TKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHN 63
T L ++++C Q+H ++++GL L I + + + LS I +
Sbjct: 6 TNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQL----INAYSLFQRQDLSRV---IFDS 58
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCARIQDKLG 122
+ +P W +IR +++ G EA+ + M + G+ P ++ + ALK+CA D
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G+ IH + +G ++ VY+ TAL+++Y K D+ +AR+VFD+M K+VV+WN+++SG +
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 183 AG-----------------DLDEAQHLFDKIPGKD--------------------VISWN 205
G D+D L++ IP + +++
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVS-LYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS 237
Query: 206 S-MISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN-- 262
S +I Y ++ A S+F+++ ++ +SW TM+A Y +G E+FD M +
Sbjct: 238 SGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 263 ------------------------------------SVSLIT-MIAGYSKSGDVDSAHKL 285
VS+ T +++ YSK G+++ A +L
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC---- 341
F ++++D++S++AMIA Y Q + EA+ LF M++ I++ P+ +TL SV+ C
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR--IHIKPNAVTLTSVLQGCAGVA 415
Query: 342 -SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAY 400
S+LG H I++ I + ATA++ +YAK G A + F L +D VA+
Sbjct: 416 ASRLGKSIHCYAIKADIES-----ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAF 470
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
+A+ G+ G A+ A +++ M + P+ T G+L
Sbjct: 471 NALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGML 509
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 232/495 (46%), Gaps = 75/495 (15%)
Query: 54 SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
+H + + + D SW +I ++ ++A+ L+V M G P S L
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSW 173
+ +Q G IHG + G +T + + AL+D Y+
Sbjct: 326 SSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA----------------------- 362
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYS-KAGNMDQANSLFQKMPE--- 229
K G+L++++ FD I K+++ WN+++SGY+ K G + SLF +M +
Sbjct: 363 --------KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQMGF 412
Query: 230 ----------------RNLASWNTMIA--GYIDSGSILS--------------AREVFDA 257
L +++I GY D+ +LS A + D
Sbjct: 413 RPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDW 472
Query: 258 MPKRNSVSLITMIAG-YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALEL 316
SV + ++AG YS+ G + KL +++ D +S+N IA +++ +E +EL
Sbjct: 473 ASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 317 FNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN--DFGVVLDDHLATALVD 374
F +ML+ N+ PDK T S++S CS+L DL I I DF D + L+D
Sbjct: 533 FKHMLQS--NIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCA-DTFVCNVLID 589
Query: 375 LYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVT 434
+Y K GSI ++F R+++L+ ++A+I GI+G +A++ F++ L P+ V+
Sbjct: 590 MYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVS 649
Query: 435 YTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP 494
+ ILTA H G+V+EG F MKD G+ P +DHY VDLL R G+L EA LI MP
Sbjct: 650 FISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMP 709
Query: 495 TQPNADVWGALLLAC 509
+A VW L C
Sbjct: 710 FPADAPVWRTFLDGC 724
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/491 (23%), Positives = 210/491 (42%), Gaps = 115/491 (23%)
Query: 130 VHVLGYDTC------VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
+H L C VYV ++ LY K+G+V A KVFD+M E+N VS+N+++ GY K
Sbjct: 34 LHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKY 93
Query: 184 GDLDEAQHLFDK------IPGKDVISW--------------------------------N 205
GD+D+A +F + +P + +S
Sbjct: 94 GDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGT 153
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIA-----GYIDS-----------GSIL 249
++ Y + ++ A +F+ MP ++L +WN M++ G++ G+ L
Sbjct: 154 CLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASL 213
Query: 250 S-------------------AREVFDAMPKRN---SVSLI-TMIAGYSKSGDVDSAHKLF 286
+ ++++ + K+ +S++ ++I+ Y K G+ A ++F
Sbjct: 214 TESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMF 273
Query: 287 DQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
D++S+NA+I A++ P +AL+LF M PE P++ T SV+ S +
Sbjct: 274 QDAGSWDIVSWNAIICATAKSENPLKALKLFVSM--PEHGFSPNQGTYVSVLGVSSLVQL 331
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYG 406
L R I + G L AL+D YAK G+++ + F +R +++V ++A++ G
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYN-------HAGLVEEGY------- 452
+ N + LF QML P T++ L + H+ +V GY
Sbjct: 392 YA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVL 450
Query: 453 ------WCFNSMKDNGLVPL--------VDHYGIMVDLLGRAGWLDEAYELIINMPTQPN 498
+ N + ++ L+ L V I+ + R G E+ +LI + QP+
Sbjct: 451 SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPD 509
Query: 499 ADVWGALLLAC 509
W + AC
Sbjct: 510 TVSWNIAIAAC 520
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 139/466 (29%), Positives = 236/466 (50%), Gaps = 37/466 (7%)
Query: 111 LKSCARIQDKLGGVSIHGQVHV--LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK 168
LK C+ I+ L IHGQ+H+ L D+ + + + S D+ AR + ++
Sbjct: 20 LKLCSSIKHLL---QIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMP 228
+WN L GY + E+ ++ ++ + + + N L
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGI-----------------KPNKLTFPFL 119
Query: 229 ERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQ 288
+ AS+ + AG +L FD N + L Y A K+FD+
Sbjct: 120 LKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHL------YGTCKKTSDARKVFDE 173
Query: 289 MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
M E++++S+N+++ +N K E F M+ PD+ T+ ++SAC G+L
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC--PDETTMVVLLSACG--GNLS 229
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
+ + S + + L+ L TALVD+YAKSG ++ A +F + +++ +SAMI G
Sbjct: 230 LGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLA 289
Query: 409 INGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPL 466
G A +A++LF +M+ E+ + PN VT+ G+L A +H GLV++GY F+ M K + + P+
Sbjct: 290 QYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPM 349
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVE---LGEIAVQ 523
+ HYG MVD+LGRAG L+EAY+ I MP +P+A VW LL AC +H++ + +GE +
Sbjct: 350 MIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKK 409
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPG 569
I+LE G ++++ +A W +A ++R +K + K G
Sbjct: 410 RLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAG 455
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 171/381 (44%), Gaps = 53/381 (13%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
+K CS++ H QIH I ++ L + + + + ++ K L+ +LH+ +
Sbjct: 19 FLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTP 78
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHG 128
S +W + R +S +E++ +Y +M+R G+ P LK+CA G I
Sbjct: 79 S-TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 129 QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDE 188
+V G+D VYV L+ LY ARKVFDEM E+NVVSWNS+++ ++ G L+
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 189 AQHLFDKIPGKDVIS-------------------------------------WNSMISGY 211
F ++ GK +++ Y
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 212 SKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNS-----VSL 266
+K+G ++ A +F++M ++N+ +W+ MI G G A ++F M K +S V+
Sbjct: 258 AKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTF 317
Query: 267 ITMIAGYSKSGDVDSAHKLFDQMD-----EKDLLSYNAMIACYAQNSKPKEALELFNYML 321
+ ++ S +G VD +K F +M+ + ++ Y AM+ + + EA + M
Sbjct: 318 LGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKM- 376
Query: 322 KPEINVHPDKMTLASVISACS 342
PD + +++SACS
Sbjct: 377 ----PFEPDAVVWRTLLSACS 393
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/460 (29%), Positives = 235/460 (51%), Gaps = 47/460 (10%)
Query: 107 ISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA 166
+S L++C ++ GV +H + + + + L+ LY+ G A +VFD M+
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 167 EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQK 226
++ D P +WNS+ISGY++ G + A +L+ +
Sbjct: 155 KR-------------------------DSSP----FAWNSLISGYAELGQYEDAMALYFQ 185
Query: 227 M------PERNLASWNTMIAGYIDSGSILSA--REVFDAMPKRNSVSLITMIAGYSKSGD 278
M P+R G I S I A R++ + L ++ Y+K GD
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 279 VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
+ A +FD + KD +S+N+M+ Y + EAL++F M++ + PDK+ ++SV+
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQN--GIEPDKVAISSVL 303
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV 398
+ ++ +H R + + G+ + +A AL+ LY+K G + +A +F + +RD V
Sbjct: 304 A---RVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTV 360
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
+++A+I N S+ +K FEQM N P+ +T+ +L+ + G+VE+G F+ M
Sbjct: 361 SWNAIISAHSKN---SNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLM 417
Query: 459 -KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIIN-MPTQPNADVWGALLLACRLHNNVE 516
K+ G+ P ++HY MV+L GRAG ++EAY +I+ M + VWGALL AC LH N +
Sbjct: 418 SKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTD 477
Query: 517 LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLR 556
+GE+A Q +LE D + LL IY+ R +D +++R
Sbjct: 478 IGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVR 517
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 172/371 (46%), Gaps = 59/371 (15%)
Query: 58 HPILHNLHNPDS--FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
H + + DS F+W +I +++ GQ+ +A++LY QM G+ P LK+C
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 206
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNS 175
I G +IH + G+ VYV AL+ +Y+K GD+ AR VFD + K+ VSWNS
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 176 LLSGYLKAGDLDEAQHLF----------DKIP-------------GKDVISW-------- 204
+L+GYL G L EA +F DK+ G+ + W
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEW 326
Query: 205 -----NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI-DSGSILSAREVFDAM 258
N++I YSK G + QA +F +M ER+ SWN +I+ + +S + ++ A
Sbjct: 327 ELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYFEQMHRAN 386
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK-----DLLSYNAMIACYAQNSKPKEA 313
K + ++ +++++ + +G V+ +LF M ++ + Y M+ Y + +EA
Sbjct: 387 AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 314 LELFNYMLKPEINVHPDKMTLASVISAC-----SQLGDLEHWRWIESHINDFGVVLDDHL 368
M+ E+ + +++ AC + +G++ R E + ++H
Sbjct: 447 YS----MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPD------NEHN 496
Query: 369 ATALVDLYAKS 379
L+ +Y+K+
Sbjct: 497 FELLIRIYSKA 507
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 258/576 (44%), Gaps = 93/576 (16%)
Query: 3 ATKLTTLMKKC---STLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHP 59
AT + L++ C +L H KQ+H HI INGL E L + ++
Sbjct: 111 ATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS---VKDAQK 167
Query: 60 ILHNLHNPDSFSWGCVIR--FFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
+ + + +SW ++R S K ++ + +S + +M+ +G+ +++S+ KS A
Sbjct: 168 VFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGA 227
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G+ H G V+++T+L+D+Y K G VG AR+VFDE+ E+++V W +++
Sbjct: 228 SALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMI 287
Query: 178 SGYLKAGDLDEAQHLFDKIPGKDVISWNSMI----------------------------- 208
+G EA LF + ++ I NS+I
Sbjct: 288 AGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 209 --------SG----YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFD 256
SG Y K G+M +F +RN SW +++GY +G A
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 257 AMPKRN--------------------------------------SVSLIT-MIAGYSKSG 277
M + +VSL+T ++ YSK G
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH-PDKMTLAS 336
+ +LFD+++++++ ++ AMI CY +N + +E+F ML ++ H PD +T+
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML---LSKHRPDSVTMGR 524
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRD 396
V++ CS L L+ + + HI ++ ++ +Y K G + A F + +
Sbjct: 525 VLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKG 584
Query: 397 LVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
+ ++A+I +G N DAI FEQM+ PN T+T +L+ + AG V+E Y FN
Sbjct: 585 SLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFN 644
Query: 457 SM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELII 491
M + L P +HY ++++LL R G ++EA L +
Sbjct: 645 LMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRLAV 680
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/565 (23%), Positives = 260/565 (46%), Gaps = 78/565 (13%)
Query: 64 LHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGG 123
LH+ + + I+ F+++ A+++ +++ G+ + S+ L++C R + L G
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 124 VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
+H + + G ++ +++T L+ +Y+ G V A+KVFDE NV SWN+LL G + +
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 184 GDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI 243
G K +DV+S + + N+ +++F ++ A + + G +
Sbjct: 191 G----------KKRYQDVLSTFTEMRELGVDLNVYSLSNVF-----KSFAGASALRQG-L 234
Query: 244 DSGSILSAREVFDAMPKRNSVSLIT-MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIA 302
+ ++ +F NSV L T ++ Y K G V A ++FD++ E+D++ + AMIA
Sbjct: 235 KTHALAIKNGLF------NSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 303 CYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI-NDFG 361
A N + EAL LF M+ E ++P+ + L +++ + L+ + + +H+
Sbjct: 289 GLAHNKRQWEALGLFRTMISEE-KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 362 VVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFE 421
V + + L+DLY K G + +F+G ++R+ ++++A++ G+ NGR A++
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 422 QMLGENIGPNLVT-----------------------------------YTGILTAYNHAG 446
M E P++VT T ++ Y+ G
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCG 467
Query: 447 LVEEGYWCFNSMKDNGL---VPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWG 503
+ E F+ ++ + ++D Y DL RAG E + L++ +P++ G
Sbjct: 468 VPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL--RAGI--EVFRLMLLSKHRPDSVTMG 523
Query: 504 ALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLR-----MG 558
+L C ++LG+ H +K E +++ + S + I G+ D + +
Sbjct: 524 RVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDLRSANFSFDAVA 581
Query: 559 VKGK----NVIKTPGCSWTQRVSLN 579
VKG +I+ GC+ R ++N
Sbjct: 582 VKGSLTWTAIIEAYGCNELFRDAIN 606
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 175/395 (44%), Gaps = 40/395 (10%)
Query: 1 MVATKLTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYV--H 58
++ T + ++ L K++HAH+L +++E F+H L ++ Y
Sbjct: 317 VILTTILPVLGDVKALKLGKEVHAHVL-KSKNYVEQPFVHSGL---IDLYCKCGDMASGR 372
Query: 59 PILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQ 118
+ + ++ SW ++ ++ G+F +A+ V MQ+ G P I++ L CA ++
Sbjct: 373 RVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELR 432
Query: 119 DKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
G IH + V + T+L+ +YSK G ++FD + ++NV +W +++
Sbjct: 433 AIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMID 492
Query: 179 GYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS 234
Y++ DL +F + D ++ +++ S + L
Sbjct: 493 CYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL----------- 541
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
G IL ++ F+++P S +I M Y K GD+ SA+ FD + K
Sbjct: 542 ----------HGHIL--KKEFESIPF-VSARIIKM---YGKCGDLRSANFSFDAVAVKGS 585
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL-EHWRWI 353
L++ A+I Y N ++A+ F M+ P+ T +V+S CSQ G + E +R+
Sbjct: 586 LTWTAIIEAYGCNELFRDAINCFEQMVSRGFT--PNTFTFTAVLSICSQAGFVDEAYRFF 643
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
+ + + + + +++L + G +++A L
Sbjct: 644 NLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 173/297 (58%), Gaps = 9/297 (3%)
Query: 282 AHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
A K+FD++ + D++ ++ ++ Y + E LE+F ML + PD+ ++ + ++AC
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVR--GIEPDEFSVTTALTAC 228
Query: 342 SQLGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAY 400
+Q+G L +WI + + D + TALVD+YAK G I+ A E+F L +R++ ++
Sbjct: 229 AQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSW 288
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
+A+I G+ G A A +++ E+ I P+ V G+L A H G +EEG +M+
Sbjct: 289 AALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENME 348
Query: 460 DN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELG 518
G+ P +HY +VDL+ RAG LD+A +LI MP +P A VWGALL CR H NVELG
Sbjct: 349 ARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELG 408
Query: 519 EIAVQHCIKLESDTV----GYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
E+AVQ+ + LE V LS+IY ++ R +A K+R ++ + + KTPG S
Sbjct: 409 ELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWS 465
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 192/438 (43%), Gaps = 74/438 (16%)
Query: 11 KKCSTLNHAKQIHAHILINGLHH----LEPLFIHHILLWDVNNYKPLSHYVHPILHNLHN 66
++C+T+ K H+ +I+GLH + L + L ++N + HY I ++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKH---FHYASSIFDSIEI 75
Query: 67 PDSFSWGCVIRFFSQKGQ---FIEAVSLYVQMQRMGLCP---TSH-AISSALKSCARIQD 119
P+SF + +IR S+ Q + L V+ + + P T H I + LK+C
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACF---- 131
Query: 120 KLGGVSIHGQVHVLGYDTCVY-----VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
S+ Q+H V+ VQT +L +Y + + ARKVFDE+ + +VV W+
Sbjct: 132 ----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWD 187
Query: 175 SLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQ----- 225
L++GY++ G E +F ++ + D S + ++ ++ G + Q + +
Sbjct: 188 VLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 226 KMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKL 285
+ E ++ ++ Y G I +A EVF+ + +RN S +I GY+ G A
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
D+++ +D + PD + L V++AC+ G
Sbjct: 308 LDRIERED--------------------------------GIKPDSVVLLGVLAACAHGG 335
Query: 346 DLEHWR-WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMI 404
LE R +E+ +G+ + +VDL ++G +D A +L + + L A +
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPL----ASV 391
Query: 405 YGFGING-RASDAIKLFE 421
+G +NG R ++L E
Sbjct: 392 WGALLNGCRTHKNVELGE 409
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 4/228 (1%)
Query: 282 AHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEI-NVHPDKMTLASVISA 340
A +FD ++ + Y+ MI +++S+P L F M+K E ++ P +T +I A
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 341 CSQLGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAYELFHGLRKRDLVA 399
C + + I + GV L D H+ T ++ +Y + + A ++F + + D+V
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVK 185
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
+ ++ G+ G S+ +++F++ML I P+ + T LTA G + +G W +K
Sbjct: 186 WDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVK 245
Query: 460 DNGLVPLVDHYGI-MVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
+ G +VD+ + G ++ A E+ + T+ N W AL+
Sbjct: 246 KKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKL-TRRNVFSWAALI 292
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 166/584 (28%), Positives = 276/584 (47%), Gaps = 52/584 (8%)
Query: 5 KLTTLMKKC---STLNHAKQIHAHILI-NGLHHLEPLFIHHILLWDVNNYKPLSHYVHP- 59
+L L+K C S L + IHAH+++ N E + + L +N Y V
Sbjct: 33 RLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSL---INLYVKCRETVRAR 89
Query: 60 -ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLC-PTSHAISSALKSCA-- 115
+ + + SW +++ + G E + L+ M G P + KSC+
Sbjct: 90 KLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149
Query: 116 -RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
RI++ G HG G + +V+ L+ +YS G A +V D++ ++ ++
Sbjct: 150 GRIEE---GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFS 206
Query: 175 SLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS 234
S LSGYL+ G E + K +D + WN++ S LF + + NLA
Sbjct: 207 SALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSL--------RLFSNLRDLNLA- 256
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL 294
+ S + R F+A + +LI M Y K G V A ++FD +++
Sbjct: 257 --------LQVHSRM-VRFGFNAEVEACG-ALINM---YGKCGKVLYAQRVFDDTHAQNI 303
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL-----GDLEH 349
++ Y Q+ +EAL LF+ M E V P++ T A ++++ ++L GDL H
Sbjct: 304 FLNTTIMDAYFQDKSFEEALNLFSKMDTKE--VPPNEYTFAILLNSIAELSLLKQGDLLH 361
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
++S + +V ALV++YAKSGSI+ A + F G+ RD+V ++ MI G
Sbjct: 362 GLVLKSGYRNHVMV-----GNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSH 416
Query: 410 NGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS-MKDNGLVPLVD 468
+G +A++ F++M+ PN +T+ G+L A +H G VE+G FN MK + P +
Sbjct: 417 HGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQ 476
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKL 528
HY +V LL +AG +A + + P + + W LL AC + N LG+ ++ I+
Sbjct: 477 HYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEK 536
Query: 529 ESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCSW 572
+ G Y LLS+I+A W+ K+R + + V K PG SW
Sbjct: 537 YPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSW 580
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 246/503 (48%), Gaps = 62/503 (12%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+ ++L++Q+ R +SH + L +C+ + G +H + G +T +TAL+
Sbjct: 67 DTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALI 126
Query: 147 DLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNS 206
D+YS K G L ++ +F+ + KD++SWN+
Sbjct: 127 DMYS-------------------------------KYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 207 MISGYSKAGNMDQANSLFQKM-PERNLASWNTM--IAGYIDSGSILSAREVFDAM---PK 260
++SG+ + G +A +F M ER S T+ + S IL + AM
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 261 RNSVSLIT-MIAGYSKSGDVDSAHKLFDQMD-EKDLLSYNAMIACYAQNSKPKEALELFN 318
R+ V L T MI+ YS G ++ A K+++ ++ D + N++I+ +N KEA L +
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Query: 319 YMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF----GVVLDDHLATALVD 374
P+ L+S ++ CS DL WI I+ G V D L L+D
Sbjct: 276 RQ-------RPNVRVLSSSLAGCSDNSDL----WIGKQIHCVALRNGFVSDSKLCNGLMD 324
Query: 375 LYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG--PNL 432
+Y K G I +A +F + + +V++++MI + +NG A+++F +M E G PN
Sbjct: 325 MYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNS 384
Query: 433 VTYTGILTAYNHAGLVEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELII 491
VT+ +++A HAGLV+EG CF MK+ LVP +HY +D+L +AG +E + L+
Sbjct: 385 VTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVE 444
Query: 492 NMPTQPNADV----WGALLLACRLHNNVELGEIAVQHCIKLES-DTVGYYSLLSSIYANL 546
M N + W A+L AC L+ ++ GE + ++ + Y L+S+ YA +
Sbjct: 445 RMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAM 504
Query: 547 GRWDDAKKLRMGVKGKNVIKTPG 569
G+WD ++LR +K K ++KT G
Sbjct: 505 GKWDVVEELRGKLKNKGLVKTAG 527
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 193/444 (43%), Gaps = 58/444 (13%)
Query: 6 LTTLMKKCSTLNH---AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPI-- 60
T ++ CS L++ +Q+HA ++ G E I L D+ Y H V +
Sbjct: 87 FTPVLGACSLLSYPETGRQVHALMIKQGA---ETGTISKTALIDM--YSKYGHLVDSVRV 141
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
++ D SW ++ F + G+ EA+ ++ M R + + +SS +K+CA ++
Sbjct: 142 FESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKIL 201
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM-AEKNVVSWNSLLSG 179
G +H V V G D V + TA++ YS +G + A KV++ + + V NSL+SG
Sbjct: 202 QQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG 260
Query: 180 YLKAGDLDEAQHLFDK-IPGKDVIS------------W---------------------N 205
++ + EA L + P V+S W N
Sbjct: 261 CIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCN 320
Query: 206 SMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKR---- 261
++ Y K G + QA ++F+ +P +++ SW +MI Y +G + A E+F M +
Sbjct: 321 GLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGV 380
Query: 262 --NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLS-----YNAMIACYAQNSKPKEAL 314
NSV+ + +I+ + +G V + F M EK L Y I ++ + +E
Sbjct: 381 LPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIW 440
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVD 374
L M++ + P + +A V+SACS DL ++ + + + + + +
Sbjct: 441 RLVERMMENDNQSIPCAIWVA-VLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSN 499
Query: 375 LYAKSGSIDKAYELFHGLRKRDLV 398
YA G D EL L+ + LV
Sbjct: 500 FYAAMGKWDVVEELRGKLKNKGLV 523
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 164/344 (47%), Gaps = 17/344 (4%)
Query: 162 FDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQAN 221
F + V S N +L A HLFD++P +D+ S NS +S + ++GN +
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 222 SLFQKMPERNLASWNTMIAGYIDSGSILS----AREVFDAMPKR----NSVSLITMIAGY 273
+LF ++ + + + + S+LS R+V M K+ ++S +I Y
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 274 SKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
SK G + + ++F+ ++EKDL+S+NA+++ + +N K KEAL +F M + + + + T
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI--SEFT 187
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
L+SV+ C+ L L+ + + + + G L L TA++ Y+ G I++A ++++ L
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 394 -KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
D V +++I G N +A L + PN+ + L + + G
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGK 301
Query: 453 WCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ 496
NG V ++D+ G+ G + +A + +P++
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK 345
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 224/427 (52%), Gaps = 25/427 (5%)
Query: 168 KNVVSWNSLLSGYLKAGDLDE----AQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSL 223
+N + + LL+ +L +L++ A +FD I + +++MI S++
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 224 F---QKMPERNLA----SWNTMI-----AGYIDSGSILSAREVFDAMPKRNSVSLITMIA 271
F K E ++A +++ +I A + G + V + + +S ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 272 GYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDK 331
Y + + A K+FD++ + D++ ++ ++ Y + E LE+F ML + PD+
Sbjct: 161 IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVK--GLEPDE 218
Query: 332 MTLASVISACSQLGDLEHWRWIESHINDFGVVLDD-HLATALVDLYAKSGSIDKAYELFH 390
++ + ++AC+Q+G L +WI + + D + TALVD+YAK G I+ A E+F
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFK 278
Query: 391 GLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYNHAGLVE 449
L +R++ +++A+I G+ G A A+ E++ E+ I P+ V G+L A H G +E
Sbjct: 279 KLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 450 EGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
EG +M+ + P +HY +VDL+ RAG LD+A LI MP +P A VWGALL
Sbjct: 339 EGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Query: 509 CRLHNNVELGEIAVQHCIKLESDTV----GYYSLLSSIYANLGRWDDAKKLRMGVKGKNV 564
CR H NVELGE+AV++ + LE V LS+IY ++ R +A K+R ++ + V
Sbjct: 399 CRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGV 458
Query: 565 IKTPGCS 571
KTPG S
Sbjct: 459 RKTPGWS 465
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 185/430 (43%), Gaps = 79/430 (18%)
Query: 11 KKCSTLNHAKQIHAHILINGLHH----LEPLFIHHILLWDVNNYKPLSHYVHPILHNLHN 66
++C+T+ K H+ +I+GLH + L + L ++N + HY I ++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKH---FHYASSIFDSIEI 75
Query: 67 PDSFSWGCVIRFFSQKGQ---FIEAVSLYVQMQRMGLCP---TSH-AISSALKSCARIQD 119
P+SF + +IR S+ Q + L V+ + + P T H I + LK+C
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACF---- 131
Query: 120 KLGGVSIHGQVHVLGYDTCVY-----VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN 174
S+ Q+H V+ VQT +L +Y + + ARKVFDE+ + +VV W+
Sbjct: 132 ----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWD 187
Query: 175 SLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER 230
L++GY++ G E +F ++ K D S + ++ ++ G + Q + + + ++
Sbjct: 188 VLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 231 NLASW--------NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSA 282
SW ++ Y G I +A EVF + +RN S +I GY+ G A
Sbjct: 248 ---SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKA 304
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
++++ +D + PD + L V++AC+
Sbjct: 305 MTCLERLERED--------------------------------GIKPDSVVLLGVLAACA 332
Query: 343 QLGDLEHWR-WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYS 401
G LE R +E+ + + + +VDL ++G +D A L + + L
Sbjct: 333 HGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPL---- 388
Query: 402 AMIYGFGING 411
A ++G +NG
Sbjct: 389 ASVWGALLNG 398
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 240/499 (48%), Gaps = 81/499 (16%)
Query: 151 KMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF----------------- 193
K G + A +FDEM E++VVSWN+++SG + G + +F
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 194 -----------DKIPGKDVIS---------WNSMISGYSKAGNMDQANSLFQKMPERNLA 233
++I G + S WNS++ Y + G D A S+F M +R++
Sbjct: 142 LASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVV 201
Query: 234 SWNTMIAGYIDSGSILSAREVF------DAMPKRNSVSLITMIAG--------------- 272
SWN +I DSG+ A + F + P +VS++ I
Sbjct: 202 SWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALC 261
Query: 273 ------------------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEAL 314
+SK +D + KLF ++++ D + N+MI Y+ + ++AL
Sbjct: 262 IKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDAL 321
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVD 374
LF +L +V PDK T +SV+S+ + + L+H + S + G LD +AT+L++
Sbjct: 322 RLF--ILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLME 378
Query: 375 LYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQML-GENIGPNLV 433
+Y K+GS+D A +F +DL+ ++ +I G N RA +++ +F Q+L +++ P+ V
Sbjct: 379 MYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRV 438
Query: 434 TYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIIN 492
T GIL A +AG V EG F+SM K +G+ P +HY +++LL R G ++EA ++
Sbjct: 439 TLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADK 498
Query: 493 MPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDA 552
+P +P++ +W +L A + L E + ++ E + Y +L IY RW+++
Sbjct: 499 IPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENS 558
Query: 553 KKLRMGVKGKNVIKTPGCS 571
KLR + + G S
Sbjct: 559 VKLRYAMNEHKLKSAQGSS 577
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 165/328 (50%), Gaps = 8/328 (2%)
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
+H Q+ G+ Y L LY K G V A ++FD++ +KN ++WN L G K G
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM------PERNLASWNTMI 239
L+ A LFD++P +DV+SWN+MISG G + +F M P S +
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 240 AGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNA 299
+ G + + + + N V +++ Y + G D A +F M+++D++S+N
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNC 205
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIND 359
+I + + + AL+ F L E+ + PD+ T++ V+S CS L +L + +
Sbjct: 206 LILSCSDSGNKEVALDQF--WLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK 263
Query: 360 FGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKL 419
G + + + A +D+++K +D + +LF L K D V ++MI + + DA++L
Sbjct: 264 MGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRL 323
Query: 420 FEQMLGENIGPNLVTYTGILTAYNHAGL 447
F + +++ P+ T++ +L++ N L
Sbjct: 324 FILAMTQSVRPDKFTFSSVLSSMNAVML 351
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 140/333 (42%), Gaps = 53/333 (15%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWD--VNNYKPLS--HYVHPIL 61
+ L + + H +QIH + + +G+ +++++W+ ++ Y+ L Y +
Sbjct: 139 FSILASLVTCVRHGEQIHGNAICSGVSR------YNLVVWNSVMDMYRRLGVFDYALSVF 192
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
+ + D SW C+I S G A+ + M+ M + P + +S + C+ +++
Sbjct: 193 LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELS 252
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G +G+ + V A +D++SK + + K+F E+ + + V NS++ Y
Sbjct: 253 KGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 182 KAGDLDEAQHLF----------DKIPGKDVIS---------------------------- 203
++A LF DK V+S
Sbjct: 313 WHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKLGFDLDTAV 372
Query: 204 WNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM----- 258
S++ Y K G++D A +F K ++L WNT+I G + + + +F+ +
Sbjct: 373 ATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQS 432
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
K + V+L+ ++ +G V+ ++F M++
Sbjct: 433 LKPDRVTLMGILVACCYAGFVNEGIQIFSSMEK 465
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSC-ARIQDKLGGVSIH 127
S+SW C G+ +A+ L++ + P SS L S A + D G +H
Sbjct: 310 SYSWHCC-------GE--DALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDH--GADVH 358
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLD 187
V LG+D V T+L+++Y K G V A VF + K+++ WN+++ G +
Sbjct: 359 SLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAV 418
Query: 188 EAQHLFDKI-----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS-----WNT 237
E+ +F+++ D ++ ++ AG +++ +F M + + + +
Sbjct: 419 ESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYAC 478
Query: 238 MIAGYIDSGSILSAREVFDAMP 259
+I G I A+++ D +P
Sbjct: 479 IIELLCRVGMINEAKDIADKIP 500
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/570 (26%), Positives = 270/570 (47%), Gaps = 48/570 (8%)
Query: 16 LNHAKQIHAHILINGLHHLEPL--FIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWG 73
L K IH++I++ G+ PL + L+ + + + V +L++ D F W
Sbjct: 240 LEFGKTIHSNIIVRGI----PLNVVLKTSLVDFYSQFSKMEDAVR-VLNSSGEQDVFLWT 294
Query: 74 CVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL 133
V+ F + + EAV +++M+ +GL P + S+ L C+ ++ G IH Q +
Sbjct: 295 SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF 193
G++ V AL+D+Y K +A +V EA +F
Sbjct: 355 GFEDSTDVGNALVDMYMKC----SASEV--------------------------EASRVF 384
Query: 194 DKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILS-AR 252
+ +V+SW ++I G G + L +M +R + ++G + + S L R
Sbjct: 385 GAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVR 444
Query: 253 EVFDA---MPKRNS----VSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYA 305
V + + +R+ V +++ Y+ S VD A + M +D ++Y +++ +
Sbjct: 445 RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFN 504
Query: 306 QNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD 365
+ K + AL + NYM I + D+++L ISA + LG LE + + + G
Sbjct: 505 ELGKHEMALSVINYMYGDGIRM--DQLSLPGFISASANLGALETGKHLHCYSVKSGFSGA 562
Query: 366 DHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLG 425
+ +LVD+Y+K GS++ A ++F + D+V+++ ++ G NG S A+ FE+M
Sbjct: 563 ASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGRAGWLD 484
+ P+ VT+ +L+A ++ L + G F MK + P V+HY +V +LGRAG L+
Sbjct: 623 KETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLE 682
Query: 485 EAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYA 544
EA ++ M +PNA ++ LL ACR N+ LGE + L Y LL+ +Y
Sbjct: 683 EATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYD 742
Query: 545 NLGRWDDAKKLRMGVKGKNVIKTPGCSWTQ 574
G+ + A+K R + K + K G S +
Sbjct: 743 ESGKPELAQKTRNLMTEKRLSKKLGKSTVE 772
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 170/381 (44%), Gaps = 43/381 (11%)
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
F+W +I F++ +F A+SL+ +M G P SS ++SCA ++D G +HG
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 130 VHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEA 189
V G++ V ++L DLYSK G EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSK-------------------------------CGQFKEA 178
Query: 190 QHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM-----PERNLASWNTMIAGY-- 242
LF + D ISW MIS A +A + +M P + A
Sbjct: 179 CELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL 238
Query: 243 -IDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMI 301
++ G + + + +P N V +++ YS+ ++ A ++ + E+D+ + +++
Sbjct: 239 GLEFGKTIHSNIIVRGIP-LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVV 297
Query: 302 ACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFG 361
+ + +N + KEA+ F M + + P+ T ++++S CS + L+ + I S G
Sbjct: 298 SGFVRNLRAKEAVGTFLEM--RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 362 VVLDDHLATALVDLYAK-SGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
+ ALVD+Y K S S +A +F + ++V+++ +I G +G D L
Sbjct: 356 FEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 421 EQMLGENIGPNLVTYTGILTA 441
+M+ + PN+VT +G+L A
Sbjct: 416 MEMVKREVEPNVVTLSGVLRA 436
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 167/357 (46%), Gaps = 23/357 (6%)
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM------ 227
N+LLS YLK + A+ LFD++ + V +W MIS ++K+ A SLF++M
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 228 -PERNLASWNTMIAGYID-------SGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDV 279
E +S AG D GS++ + F+ NSV ++ YSK G
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVI--KTGFEG----NSVVGSSLSDLYSKCGQF 175
Query: 280 DSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVIS 339
A +LF + D +S+ MI+ K +EAL+ ++ M+K V P++ T ++
Sbjct: 176 KEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA--GVPPNEFTFVKLLG 233
Query: 340 ACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA 399
A S LG LE + I S+I G+ L+ L T+LVD Y++ ++ A + + ++D+
Sbjct: 234 ASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFL 292
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
+++++ GF N RA +A+ F +M + PN TY+ IL+ + ++ G +
Sbjct: 293 WTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTI 352
Query: 460 DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVE 516
G D +VD+ + + + PN W L+L H V+
Sbjct: 353 KVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQ 409
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 145/298 (48%), Gaps = 10/298 (3%)
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
+++ Y K+ + +A KLFD+M + + ++ MI+ + ++ + AL LF M+ H
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMAS--GTH 121
Query: 329 PDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL 388
P++ T +SV+ +C+ L D+ + + + G + + ++L DLY+K G +A EL
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 389 FHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLV 448
F L+ D ++++ MI + +A++ + +M+ + PN T+ +L A + GL
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL- 240
Query: 449 EEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL-- 506
E G +++ G+ V +VD + +++A ++N + + +W +++
Sbjct: 241 EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR-VLNSSGEQDVFLWTSVVSG 299
Query: 507 LACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYA----NLGRWDDAKKLRMGVK 560
L +G + L+ + Y ++LS A + G+ ++ +++G +
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFE 357
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 152/345 (44%), Gaps = 19/345 (5%)
Query: 6 LTTLMKKCSTLNHAK---QIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILH 62
L+ +++ CS L H + +IHA++L H++ + L D Y ++
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLL---RRHVDGEMVVGNSLVDAYASSRKVDYAWNVIR 486
Query: 63 NLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG 122
++ D+ ++ ++ F++ G+ A+S+ M G+ ++ + + A +
Sbjct: 487 SMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALET 546
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLK 182
G +H G+ V +L+D+YSK G + A+KVF+E+A +VVSWN L+SG
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLAS 606
Query: 183 AGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP-----ERNLA 233
G + A F+++ K D +++ ++S S D FQ M E +
Sbjct: 607 NGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVE 666
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMP-KRNSVSLITMIAGYSKSGDVDSAHKLFDQ---M 289
+ ++ +G + A V + M K N++ T++ G++ + ++ +
Sbjct: 667 HYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLAL 726
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
D Y + Y ++ KP+ A + N M + ++ K T+
Sbjct: 727 APSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTV 771
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 231/512 (45%), Gaps = 86/512 (16%)
Query: 141 VQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG-- 198
V +LL LY+K G + A K+FDEM ++V+S N + G+L+ + + L ++ G
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 199 ------------------------------------KDVISWNSMISGYSKAGNMDQANS 222
K++ N +I+ Y K G
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 223 LFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITMIAG------ 272
+F M RN+ + +I+G I++ +F M + NSV+ ++ +A
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 273 -----------------------------YSKSGDVDSAHKLFDQMDEKDLLSYNAMIAC 303
YSK G ++ A +F+ E D +S ++
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLA---SVISACSQLGDLEHWRWIESHINDF 360
AQN +EA++ F ML+ + + + ++ S I LG H I+ +
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG- 390
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLF 420
+ + L+++Y+K G + + +F + KR+ V++++MI F +G A+KL+
Sbjct: 391 ----NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLY 446
Query: 421 EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD-NGLVPLVDHYGIMVDLLGR 479
E+M + P VT+ +L A +H GL+++G N MK+ +G+ P +HY ++D+LGR
Sbjct: 447 EEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGR 506
Query: 480 AGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLL 539
AG L EA I ++P +P+ +W ALL AC H + E+GE A + + D+ + L+
Sbjct: 507 AGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILI 566
Query: 540 SSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
++IY++ G+W + K +K V K G S
Sbjct: 567 ANIYSSRGKWKERAKTIKRMKAMGVTKETGIS 598
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 174/365 (47%), Gaps = 40/365 (10%)
Query: 170 VVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPE 229
+V WNSLLS Y K G L +A LFD++P +DVIS N + G+ + + L ++M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-- 147
Query: 230 RNLASWN------TMIAGYIDS------GSILSAREVFDAMPKRNSVSLITMIAGYSKSG 277
L S T++ D+ ++ A + K SV +I Y K G
Sbjct: 148 --LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVG-NKLITSYFKCG 204
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
S +FD M +++++ A+I+ +N ++ L LF+ M + VHP+ +T S
Sbjct: 205 CSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGL--VHPNSVTYLSA 262
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
++ACS + + I + + +G+ + + +AL+D+Y+K GSI+ A+ +F + D
Sbjct: 263 LAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDE 322
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQML--GENIGPNLVTYT-GILTAYNHAG-------L 447
V+ + ++ G NG +AI+ F +ML G I N+V+ G+ N G L
Sbjct: 323 VSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSL 382
Query: 448 VEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLL 507
V + + N+ +NGL +++ + G L ++ + MP + N W +++
Sbjct: 383 VIKRKFSGNTFVNNGL----------INMYSKCGDLTDSQTVFRRMPKR-NYVSWNSMIA 431
Query: 508 ACRLH 512
A H
Sbjct: 432 AFARH 436
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 55/311 (17%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+ + L+ M+R + P S SAL +C+ Q + G IH + G ++ + +++AL+
Sbjct: 239 DGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALM 298
Query: 147 DLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLF------------- 193
D+YSK G + A +F+ E + VS +L G + G +EA F
Sbjct: 299 DMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDAN 358
Query: 194 ---------------------------DKIPGKDVISWNSMISGYSKAGNMDQANSLFQK 226
K G ++ N +I+ YSK G++ + ++F++
Sbjct: 359 VVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVN-NGLINMYSKCGDLTDSQTVFRR 417
Query: 227 MPERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSA 282
MP+RN SWN+MIA + G L+A ++++ M K V+ ++++ S G +D
Sbjct: 418 MPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKG 477
Query: 283 HKLFDQMDEKDLLS-----YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
+L ++M E + Y +I + KEA + + + PD ++
Sbjct: 478 RELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFID-----SLPLKPDCKIWQAL 532
Query: 338 ISACSQLGDLE 348
+ ACS GD E
Sbjct: 533 LGACSFHGDTE 543
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/467 (19%), Positives = 186/467 (39%), Gaps = 112/467 (23%)
Query: 55 HYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQM------------------- 95
+ P+ ++H W ++ +++ G+ ++A+ L+ +M
Sbjct: 76 EFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNR 135
Query: 96 ---------QRM-GLCPTSHA-ISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTA 144
+RM G HA ++ L C + L IH + GYD + V
Sbjct: 136 ETESGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNK 195
Query: 145 LLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK--------- 195
L+ Y K G + R VFD M+ +NV++ +++SG ++ ++ LF
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 196 -----------------IPGKDV--ISW-----------NSMISGYSKAGNMDQANSLFQ 225
+ G+ + + W ++++ YSK G+++ A ++F+
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 226 KMPERNLASWNTMIAGYIDSGSILSAREVFDAMPK------RNSVSLIT----------- 268
E + S ++ G +GS A + F M + N VS +
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 269 ----------------------MIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQ 306
+I YSK GD+ + +F +M +++ +S+N+MIA +A+
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF-GVVLD 365
+ AL+L+ M E V P +T S++ ACS +G ++ R + + + + G+
Sbjct: 436 HGHGLAALKLYEEMTTLE--VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 366 DHLATALVDLYAKSGSIDKAYELFHGLR-KRDLVAYSAMIYGFGING 411
T ++D+ ++G + +A L K D + A++ +G
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 127/277 (45%), Gaps = 19/277 (6%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
I + D S ++ +Q G EA+ +++M + G+ ++ +S+ L + I +
Sbjct: 313 IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVL-GVSFIDN 371
Query: 120 KLG-GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
LG G +H V + +V L+++YSK GD+ ++ VF M ++N VSWNS+++
Sbjct: 372 SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIA 431
Query: 179 GYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMP-----E 229
+ + G A L++++ +V +++ S++ S G +D+ L +M E
Sbjct: 432 AFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIE 491
Query: 230 RNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSL-ITMIAGYSKSGDVD----SAHK 284
+ +I +G + A+ D++P + + ++ S GD + +A +
Sbjct: 492 PRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQ 551
Query: 285 LFDQMDEKDLLSYNAMIA-CYAQNSKPKEALELFNYM 320
LF D S + +IA Y+ K KE + M
Sbjct: 552 LFQT--APDSSSAHILIANIYSSRGKWKERAKTIKRM 586
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/603 (23%), Positives = 272/603 (45%), Gaps = 101/603 (16%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
H + D ++ +I S+ G + A+ LY +M GL ++ S L C+
Sbjct: 66 HEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDE 125
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G+ +H +V LG+ ++V++AL+ LY+ + V A K+FDEM ++N+ N LL
Sbjct: 126 LFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLL 185
Query: 178 SGYLKAGDLDEAQHLFD-----KIPG--KDVISWNSMISG-------------------- 210
+ + G E++ LF+ ++ G K+ +++ MI G
Sbjct: 186 RCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS 242
Query: 211 ----------------YSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREV 254
YS G++ + F +PE+++ SWN++++ D GS+L + ++
Sbjct: 243 GWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDL 302
Query: 255 FDAMP---KRNSVSLI-------------------------------------TMIAGYS 274
F M KR S+ +I Y
Sbjct: 303 FSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYG 362
Query: 275 KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
K ++++ L+ + +L N+++ K+ +E+F M+ + D++TL
Sbjct: 363 KCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGI--DEVTL 420
Query: 335 ASVISACS-------QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
++V+ A S L H I+S G D ++ +L+D Y KSG + + +
Sbjct: 421 STVLKALSLSLPESLHSCTLVHCCAIKS-----GYAADVAVSCSLIDAYTKSGQNEVSRK 475
Query: 388 LFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGL 447
+F L ++ +++I G+ NG +D +K+ +M N+ P+ VT +L+ +H+GL
Sbjct: 476 VFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGL 535
Query: 448 VEEGYWCFNSMKDN-GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALL 506
VEEG F+S++ G+ P Y MVDLLGRAG +++A L++ + W +LL
Sbjct: 536 VEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLL 595
Query: 507 LACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIK 566
+CR+H N +G A + + LE + Y +S Y +G ++ ++++R + +++
Sbjct: 596 QSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMR 655
Query: 567 TPG 569
G
Sbjct: 656 EIG 658
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 275 KSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
KSG++ SAH+ FD+M +D+++YN +I+ ++ A+EL+ M+ + T
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS--CGLRESASTF 115
Query: 335 ASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK 394
SV+S CS + + G + + +ALV LYA +D A +LF +
Sbjct: 116 PSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLD 175
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
R+L + ++ F G + +++ +M E + N +TY ++ +H LV EG
Sbjct: 176 RNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 223/444 (50%), Gaps = 28/444 (6%)
Query: 145 LLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHL------FDKIPG 198
LL S+ GD ++ + + + N + YL + +A F +P
Sbjct: 60 LLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVP- 116
Query: 199 KDVISWNSMISGYSKAGNMDQAN----SLFQKMPERNLASWNTMIAGYIDSGSILSAREV 254
D ++ S+IS K +D + ++ L N+++ Y G++ A+++
Sbjct: 117 -DSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 255 FDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEAL 314
F +PKR+ VS ++IAG ++GDV +AHKLFD+M +K+++S+N MI+ Y + P ++
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE-SHINDF---GVVLDDHLAT 370
LF M++ ++ TL +++AC + L+ R + S I F VV+D T
Sbjct: 236 SLFREMVRA--GFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVID----T 289
Query: 371 ALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGP 430
AL+D+Y K + A +F L R+ V ++ MI ++GR ++LFE M+ + P
Sbjct: 290 ALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRP 349
Query: 431 NLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV-PLVDHYGIMVDLLGRAGWLDEAYEL 489
+ VT+ G+L AGLV +G ++ M D + P H M +L AG+ +EA E
Sbjct: 350 DEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEA 409
Query: 490 IINMPTQ---PNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANL 546
+ N+P + P + W LL + R N LGE + I+ + YY LL +IY+
Sbjct: 410 LKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVT 469
Query: 547 GRWDDAKKLRMGVKGKNVIKTPGC 570
GRW+D ++R VK + + + PGC
Sbjct: 470 GRWEDVNRVREMVKERKIGRIPGC 493
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 180/367 (49%), Gaps = 16/367 (4%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+A+ Y + R G P S+ S + + G HGQ G D + VQ +L+
Sbjct: 101 QALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLM 160
Query: 147 DLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNS 206
+Y+ G + A+K+F E+ ++++VSWNS+++G ++ GD+ A LFD++P K++ISWN
Sbjct: 161 HMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNI 220
Query: 207 MISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMPKR- 261
MIS Y A N + SLF++M + N ++ ++ S + R V ++ +
Sbjct: 221 MISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
Query: 262 -NSVSLI--TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFN 318
NS +I +I Y K +V A ++FD + ++ +++N MI + + +P+ LELF
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE 340
Query: 319 YMLKPEINVHPDKMTLASVISACSQLGDLEHWR-WIESHINDFGVVLDDHLATALVDLYA 377
M+ + PD++T V+ C++ G + + + +++F + + + +LY+
Sbjct: 341 AMINGML--RPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYS 398
Query: 378 KSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTG 437
+G ++A E L D+ S + R + LGE+I +L+
Sbjct: 399 SAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTG-----NPTLGESIAKSLIETDP 453
Query: 438 ILTAYNH 444
+ Y H
Sbjct: 454 LNYKYYH 460
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 108/253 (42%), Gaps = 13/253 (5%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
H + + + + SW +I + ++SL+ +M R G + L +C R
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRS 263
Query: 118 QDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLL 177
G S+H + ++ V + TAL+D+Y K +VG AR++FD ++ +N V+WN ++
Sbjct: 264 ARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMI 323
Query: 178 SGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKMPER--- 230
+ G + LF+ + D +++ ++ G ++AG + Q S + M +
Sbjct: 324 LAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQI 383
Query: 231 --NLASWNTMIAGYIDSGSILSAREVFDAMPKRN----SVSLITMIAGYSKSGDVDSAHK 284
N M Y +G A E +P + S +++ +G+
Sbjct: 384 KPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGES 443
Query: 285 LFDQMDEKDLLSY 297
+ + E D L+Y
Sbjct: 444 IAKSLIETDPLNY 456
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 219/417 (52%), Gaps = 14/417 (3%)
Query: 168 KNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSL 223
K +N+L+ YL G+ + LF + V +++ S+I + ++ +L
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVAL 108
Query: 224 FQKMPERNLASWN-----TMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGD 278
+ +R W+ + + Y + G + S+R++FD + V+ +++ ++G+
Sbjct: 109 HGQALKRGFL-WDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 279 VDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV-HPDKMTLASV 337
+D A + F +M D++S+ +I +++ +AL +F M++ E V P++ T SV
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 338 ISACSQL--GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
+S+C+ G + + I ++ ++L L TAL+D+Y K+G ++ A +F +R +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCF 455
+ A++A+I NGR A+++FE M + PN +T ILTA + LV+ G F
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
Query: 456 NSM-KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNN 514
+S+ + ++P +HYG +VDL+GRAG L +A I ++P +P+A V GALL AC++H N
Sbjct: 348 SSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHEN 407
Query: 515 VELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKTPGCS 571
ELG + I L+ G Y LS+ A W +A+K+R + + K P S
Sbjct: 408 TELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 176/336 (52%), Gaps = 18/336 (5%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
+ +IR + G++ +++L+ M + P + S +K+ GV++HGQ
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 132 VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQH 191
G+ +VQT+ + Y ++GD+ ++RK+FD++ VV+ NSLL + G++D A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 192 LFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYI-------- 243
F ++P DV+SW ++I+G+SK G +A +F +M + A A ++
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 244 -DSGSILSAREVFDAMPKRNSVSLITMIAG----YSKSGDVDSAHKLFDQMDEKDLLSYN 298
D G I +++ + + + T+ Y K+GD++ A +FDQ+ +K + ++N
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC--SQLGDLEHWRWIESH 356
A+I+ A N +PK+ALE+F M+K VHP+ +TL ++++AC S+L DL + S
Sbjct: 294 AIISALASNGRPKQALEMFE-MMKSSY-VHPNGITLLAILTACARSKLVDL-GIQLFSSI 350
Query: 357 INDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
+++ ++ +VDL ++G + A L
Sbjct: 351 CSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSL 386
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLY---VQMQRMGLCPTSHAISSALK 112
Y + D SW VI FS+KG +A+ ++ +Q +R + P S L
Sbjct: 170 YAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLS 229
Query: 113 SCARIQDKLGGVSIHGQVHVLGYDTCVYV------QTALLDLYSKMGDVGTARKVFDEMA 166
SCA GG+ + Q+H GY + TALLD+Y K GD+ A +FD++
Sbjct: 230 SCANFDQ--GGIRLGKQIH--GYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 167 EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANS 222
+K V +WN+++S G +A +F+ + V I+ ++++ +++ +D
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQ 345
Query: 223 LFQKM 227
LF +
Sbjct: 346 LFSSI 350
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 257/553 (46%), Gaps = 56/553 (10%)
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI-- 126
S SW ++ ++ G I + V++ G P + S L R+ G VS+
Sbjct: 21 SNSWSTIVPALARFGS-IGVLRAAVELINDGEKPDA----SPLVHLLRVSGNYGYVSLCR 75
Query: 127 --HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
HG V G+ + + +L+ Y + A KVFDEM + +V+SWNSL+SGY+++G
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 185 DLDEAQHLF------DKIPGK----------------------------------DVISW 204
E LF D P + +V+
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSV 264
N +I Y K G MD A +FQ M E++ SWN ++A +G + F MP ++V
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTV 255
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
+ +I + KSGD ++A ++ M + S+N ++ Y + K EA E F M
Sbjct: 256 TYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS- 314
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
V D+ +L+ V++A + L + I + + G+ +A+AL+D+Y+K G +
Sbjct: 315 -GVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 385 AYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN-IGPNLVTYTGILTAYN 443
A +F + +++L+ ++ MI G+ NG + +AIKLF Q+ E + P+ T+ +L +
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCS 433
Query: 444 HAGLVEEGYWCFNSMKDN--GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADV 501
H + E + M N + P V+H ++ +G+ G + +A ++I +
Sbjct: 434 HCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA 493
Query: 502 WGALLLACRLHNNVELGEIAVQHCIKL-ESDTVGY-YSLLSSIYANLGRWDDAKKLRMGV 559
W ALL AC +++ + I+L ++D Y Y ++S++YA RW + ++R +
Sbjct: 494 WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIM 553
Query: 560 KGKNVIKTPGCSW 572
+ V+K G SW
Sbjct: 554 RESGVLKEVGSSW 566
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 188/408 (46%), Gaps = 68/408 (16%)
Query: 58 HPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARI 117
H + + +PD SW ++ + Q G+F E + L++++ R + P + ++AL +CAR+
Sbjct: 110 HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARL 169
Query: 118 QDKLGGVSIHGQVHVLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL 176
G IH ++ LG + V V L+D+Y K G + A VF M EK+ VSWN++
Sbjct: 170 HLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAI 229
Query: 177 LSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
++ + G L+ F ++P D +++N +I + K+G+ + A + MP N +SWN
Sbjct: 230 VASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWN 289
Query: 237 TMIAGYIDSGSILSAREVFDAMPKRN------SVSLI----------------------- 267
T++ GY++S A E F M S+S++
Sbjct: 290 TILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL 349
Query: 268 ----------TMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELF 317
+I YSK G + A +F M K+L+ +N MI+ YA+N EA++LF
Sbjct: 350 GLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLF 409
Query: 318 NYMLKPEINVHPDKMTLASVISACSQ--------LGDLEHWRWIESHINDFGVVLDDHLA 369
N LK E + PD+ T ++++ CS LG + E IN++ +
Sbjct: 410 N-QLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG------YFEMMINEYRIKPSVEHC 462
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
+L+ + G + +A ++ +GFG +G A A+
Sbjct: 463 CSLIRAMGQRGEVWQAKQVIQE-------------FGFGYDGVAWRAL 497
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 202/389 (51%), Gaps = 23/389 (5%)
Query: 126 IHGQV--HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKA 183
IH ++ H L D + Q L+ + S G+ A VF+++ + +WN ++
Sbjct: 39 IHTKIIKHNLTNDQLLVRQ--LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 184 GDLDEA-----------QHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL 232
EA Q FDK VI + S + G Q + L K N
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIK-ACLASSSIRLGT--QVHGLAIKAGFFND 153
Query: 233 ASW-NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
+ NT++ Y G S R+VFD MP R+ VS TM+ G + +DSA +F+QM
Sbjct: 154 VFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPM 213
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
++++S+ AMI Y +N +P EA +LF M + V P++ T+ +++ A +QLG L R
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD--VKPNEFTIVNLLQASTQLGSLSMGR 271
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
W+ + + G VLD L TAL+D+Y+K GS+ A ++F ++ + L +++MI G++G
Sbjct: 272 WVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHG 331
Query: 412 RASDAIKLF-EQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM-KDNGLVPLVDH 469
+A+ LF E ++ P+ +T+ G+L+A + G V++G F M + G+ P+ +H
Sbjct: 332 CGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREH 391
Query: 470 YGIMVDLLGRAGWLDEAYELIINMPTQPN 498
M+ LL +A +++A L+ +M + P+
Sbjct: 392 NACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 195/403 (48%), Gaps = 32/403 (7%)
Query: 9 LMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPD 68
++ CS + KQIH I+ + L + + L + ++ V++ + Y + + L +P
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTN-DQLLVRQLI--SVSSSFGETQYASLVFNQLQSPS 82
Query: 69 SFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSH-------AISSALKSCARIQDKL 121
+F+W +IR S + EA+ L++ M SH +K+C
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMM------ISHQSQFDKFTFPFVIKACLASSSIR 136
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
G +HG G+ V+ Q L+DLY K G + RKVFD+M +++VSW ++L G +
Sbjct: 137 LGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLV 196
Query: 182 KAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG 241
LD A+ +F+++P ++V+SW +MI+ Y K D+A LF++M ++ I
Sbjct: 197 SNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVN 256
Query: 242 YIDS----GSILSAREVFDAMPKRNSV-------SLITMIAGYSKSGDVDSAHKLFDQMD 290
+ + GS+ R V D K V +LI M YSK G + A K+FD M
Sbjct: 257 LLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDM---YSKCGSLQDARKVFDVMQ 313
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH- 349
K L ++N+MI + +EAL LF M + E +V PD +T V+SAC+ G+++
Sbjct: 314 GKSLATWNSMITSLGVHGCGEEALSLFEEMEE-EASVEPDAITFVGVLSACANTGNVKDG 372
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
R+ I +G+ ++ L ++ ++KA L +
Sbjct: 373 LRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESM 415
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 219/536 (40%), Gaps = 95/536 (17%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
W ++R + EAV YV M +G+ P ++A + LK+ A +QD G IH V+
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 132 VLGYDT-CVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQ 190
GY V V L++LY K GD G KVFD ++E+N VSWNSL+S + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 191 HLF----------------------DKIP-------GKDVISW------------NSMIS 209
F +P GK V ++ N++++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 210 GYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM------PKRNS 263
Y K G + + L R+L +WNT+++ + +L A E M P +
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 264 VSLI----------------------------------TMIAGYSKSGDVDSAHKLFDQM 289
+S + ++ Y V S ++FD M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
++ + +NAMIA Y+QN KEAL LF M + + + T+A V+ AC + G
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGM-EESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGI 409
I + G+ D + L+D+Y++ G ID A +F + RDLV ++ MI G+
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 410 NGRASDAIKLFEQMLG-----------ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
+ DA+ L +M ++ PN +T IL + + +G
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 459 KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNN 514
N L V +VD+ + G L + ++ +P Q N W +++A +H N
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 237/560 (42%), Gaps = 111/560 (19%)
Query: 6 LTTLMKKCSTLNH------AKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHP 59
L +++ CS L KQ+HA+ L G L I+ ++ K S V
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG--ELNSFIINTLVAMYGKLGKLASSKV-- 257
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+L + D +W V+ Q Q +EA+ +M G+ P ISS L +C+ ++
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 120 KLGGVSIHGQVHVLG-YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
G +H G D +V +AL+D+Y V + R+VFD M ++ + WN++++
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 179 GYLK-----------------AGDLDEAQHLFDKIPG----------------------- 198
GY + AG L + + +P
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM 258
+D N+++ YS+ G +D A +F KM +R+L +WNTMI GY+ S A + M
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 259 P---------------KRNSVSLITMIAG------------------------------- 272
K NS++L+T++
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 557
Query: 273 ----YSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH 328
Y+K G + + K+FDQ+ +K+++++N +I Y + +EA++L M+ V
Sbjct: 558 LVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ--GVK 615
Query: 329 PDKMTLASVISACSQLGDL-EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYE 387
P+++T SV +ACS G + E R D+GV +VDL ++G I +AY+
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQ 675
Query: 388 LFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN---IGPNLVT-YTGILTAYN 443
L + + RD A G + R + +++ E + +N + PN+ + Y + Y+
Sbjct: 676 LMN-MMPRDFNKAGAWSSLLGAS-RIHNNLEIGE-IAAQNLIQLEPNVASHYVLLANIYS 732
Query: 444 HAGLVEEGYWCFNSMKDNGL 463
AGL ++ +MK+ G+
Sbjct: 733 SAGLWDKATEVRRNMKEQGV 752
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 125/549 (22%), Positives = 240/549 (43%), Gaps = 79/549 (14%)
Query: 28 INGLHHLEPLFIHHILLWDV----NNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKG 83
+ ++ EP F + ++ ++ N +K ++ + +L P F++G V++ F
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 84 QFIEAVSLYVQMQRMGLCPTS---HAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVY 140
+ A+SL M + G P S + +L C R+ + L + ++ ++G CV
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL---QLLEEMFLMG---CVP 285
Query: 141 VQTALLDL---YSKMGDVGTARKVFDEMAEKNV----VSWNSLLSGYLKAGDLDEAQHLF 193
D+ K + A K+ + M + +++ L++G K G +D A+ LF
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 194 DKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER-----NLASWNTMIAGYIDSGSI 248
+IP +++ +N++I G+ G +D A ++ M ++ ++N++I GY G +
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 249 LSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL----LSYNAM 300
A EV M K N S ++ G+ K G +D A+ + ++M L + +N +
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 301 IACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF 360
I+ + + + EA+E+F M P PD T S+IS ++ +++H W+ +
Sbjct: 466 ISAFCKEHRIPEAVEIFREM--PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 361 GVVLDDHLATALVDLYAKSGSIDKAYEL-----FHGLRKRDLVAYSAMIYGFGINGRASD 415
GVV + L++ + + G I +A +L F G D + Y+++I G G
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDK 582
Query: 416 AIKLFEQMLGE-----NIG------------------------------PNLVTYTGILT 440
A LFE+ML + NI P++VT+ ++
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 441 AYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI---INMPTQP 497
AG +E+G F ++ G+ P + ++ L + G++ +A L+ I P
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 498 NADVWGALL 506
N W LL
Sbjct: 703 NHRTWSILL 711
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 192/462 (41%), Gaps = 56/462 (12%)
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSL----LSGYLKAGDLDEA 189
GY V L+ G+ T ++ +M ++ +V SL + Y KAG +
Sbjct: 106 GYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQT 165
Query: 190 QHLFDKIPGKDVISWNSMISGYSK------AGNMDQ-ANSLFQKMPER----NLASWNTM 238
L ++ ++V S Y+ +GN + A ++F M R L ++ +
Sbjct: 166 TRLMLEM--RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 239 IAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM----D 290
+ + I SA + M K NSV T+I SK V+ A +L ++M
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 283
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
D ++N +I + + EA ++ N ML PD +T +++ ++G ++
Sbjct: 284 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIR--GFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR-----DLVAYSAMIY 405
+ + I +V+ L+ + G +D A + + D+ Y+++IY
Sbjct: 342 KDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
G+ G A+++ M + PN+ +YT ++ + G ++E Y N M +GL P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLACRLHNNVELGEIAV 522
+ ++ + + EA E+ MP +P+ + +L+ E+ EI
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL-----CEVDEI-- 510
Query: 523 QHCIKLESD---------TVGYYSLLSSIYANLGRWDDAKKL 555
+H + L D TV Y +L+++ + G +A+KL
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINA-FLRRGEIKEARKL 551
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 210/487 (43%), Gaps = 65/487 (13%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD F + +I S+ + EA S V+M GL P + + + +
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNSLLSGYLK 182
++ G + T L++ Y K G V A + M ++ ++ ++ L++G K
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 183 AGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLAS 234
+D+A+ +F ++ GK DV S+ +I+G+SK GNM +A+S+F +M E N+
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+N ++ G+ SG I A+E+ D M + N+V+ T+I GY KSGD+ A +LFD+M
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
K L+ PD +++ C +L D+E
Sbjct: 725 LKGLV---------------------------------PDSFVYTTLVDGCCRLNDVERA 751
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYEL--------FHGLRKRDLVAYSA 402
I N G AL++ K G + E+ F K + V Y+
Sbjct: 752 ITI-FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
MI G A +LF QM N+ P ++TYT +L Y+ G E + F+ G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 463 LVPLVDH--YGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA-CR--LHNNVEL 517
+ P DH Y ++++ + G +A L+ M + D L ++ CR L ++
Sbjct: 871 IEP--DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 518 GEIAVQH 524
GE+ V
Sbjct: 929 GEMEVAE 935
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 217/484 (44%), Gaps = 43/484 (8%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSC--ARIQDKLGGV 124
P +++ +I + + +A SL V+M +G+ +H S + R D G+
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 125 S----IHG-QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNS 175
HG + YD C+ V SK G + A+ +FD M ++ ++ S
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVM-------SKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVI----SWNSMISGYSKAGNMDQANSLFQKM---- 227
L+ GY + ++ + L ++ ++++ ++ +++ G +G++D A ++ ++M
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 228 PERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAH 283
N+ + T+I ++ + A V M ++ I ++I G SK+ +D A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 284 KLFDQMDEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVIS 339
+M E L +Y A I+ Y + S+ A + M E V P+K+ +I+
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM--RECGVLPNKVLCTGLIN 565
Query: 340 ACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR---- 395
+ G + + D G++ D T L++ K+ +D A E+F +R +
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCF 455
D+ +Y +I GF G A +F++M+ E + PN++ Y +L + +G +E+
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 456 NSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLACRLH 512
+ M GL P Y ++D ++G L EA+ L M + P++ V+ L+ C
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 513 NNVE 516
N+VE
Sbjct: 746 NDVE 749
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 190/427 (44%), Gaps = 26/427 (6%)
Query: 57 VHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCAR 116
VH ++ + N + + C I S++G +A +L+ M GL P + A +S ++ R
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVS 172
++ G + ++ Y ++ GD+ A + EM NVV
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP 228
+ +L+ +L+ +A + ++ + D+ +NS+I G SKA MD+A S +M
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 229 ERNLA----SWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITMIAGYSKSGDVD 280
E L ++ I+GYI++ SA + M + N V +I Y K G V
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 281 SAHKLFDQMDEKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
A + M ++ +L +Y ++ +N K +A E+F M + PD +
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK--GIAPDVFSYGV 632
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRD 396
+I+ S+LG+++ I + + G+ + + L+ + +SG I+KA EL + +
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 397 L----VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
L V Y +I G+ +G ++A +LF++M + + P+ YT ++ VE
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 453 WCFNSMK 459
F + K
Sbjct: 753 TIFGTNK 759
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 200/446 (44%), Gaps = 29/446 (6%)
Query: 88 AVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLD 147
A+ L M GL P + + +I+ S+ ++ LG + + L+D
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 148 LYSKMGDVGTARKVFDEMAEKNV----VSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVI- 202
K + A+ + EM + ++ + K G +++A+ LFD + +I
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 203 ---SWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGYIDSGSILSA---- 251
++ S+I GY + N+ Q L +M +RN+ ++ T++ G SG + A
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 252 REVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQN 307
+E+ + + N V T+I + ++ A ++ +M E+ D+ YN++I ++
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKA 500
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
+ EA M+ E + P+ T + IS + + + + GV+ +
Sbjct: 501 KRMDEARSFLVEMV--ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQM 423
L T L++ Y K G + +A + + + D Y+ ++ G N + DA ++F +M
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
G+ I P++ +Y ++ ++ G +++ F+ M + GL P V Y +++ R+G +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 484 DEAYELIINMPTQ---PNADVWGALL 506
++A EL+ M + PNA + ++
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTII 704
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/380 (19%), Positives = 155/380 (40%), Gaps = 46/380 (12%)
Query: 171 VSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNS----MISGYSKAGNMDQANSLFQK 226
V + L GY+ G ++EA +F G +++ S ++ + +D +++
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 227 MPERNLA----SWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI--------------- 267
M ERN+ +++ +I + +G++ ++V K + +
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 268 ----------TMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEA 313
+I G K ++ A L +MD D +Y+ +I + A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 314 LELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALV 373
L + M+ IN+ P I S+ G +E + + + G++ +L+
Sbjct: 332 KGLVHEMVSHGINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 374 DLYAKSGSIDKAYELFHGLRKRDLV----AYSAMIYGFGINGRASDAIKLFEQMLGENIG 429
+ Y + ++ + YEL ++KR++V Y ++ G +G A + ++M+
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCR 449
Query: 430 PNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYEL 489
PN+V YT ++ + + MK+ G+ P + Y ++ L +A +DEA
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 490 IINMPT---QPNADVWGALL 506
++ M +PNA +GA +
Sbjct: 510 LVEMVENGLKPNAFTYGAFI 529
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 208/471 (44%), Gaps = 91/471 (19%)
Query: 123 GVSIHGQVHVLGY----DTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLS 178
G+ + ++H + D +Y L+ ++GD+ ARKVFD M EKN V+W +++
Sbjct: 97 GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMID 156
Query: 179 GYLKAGDLDEAQHLFD---------------------------------------KIPGK 199
GYLK G DEA LF+ K+
Sbjct: 157 GYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG 216
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSG------------- 246
++I +S++ Y++ G + A F M E+++ SW +I+ G
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 247 ------------SILSA----------REVFDAMPKRN-------SVSLITMIAGYSKSG 277
SIL A R+V + KR SL+ M Y+K G
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDM---YAKCG 333
Query: 278 DVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
++ K+FD M ++ +++ ++IA +A+ +EA+ LF M + ++ + +T+ S+
Sbjct: 334 EISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRR--HLIANNLTVVSI 391
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL 397
+ AC +G L + + + I + + ++ + LV LY K G A+ + L RD+
Sbjct: 392 LRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDV 451
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
V+++AMI G G S+A+ ++M+ E + PN TY+ L A ++ + G +
Sbjct: 452 VSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSI 511
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLA 508
K N + V ++ + + G++ EA+ + +MP + N W A+++
Sbjct: 512 AKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMG 561
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 204/444 (45%), Gaps = 45/444 (10%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L L + + +Q+H +++ G+ +L + L++ L+ + +
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGVGNL---IVESSLVYFYAQCGELTSALRA-FDMME 245
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
D SW VI S+KG I+A+ +++ M P + S LK+C+ + G
Sbjct: 246 EKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQ 305
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAGD 185
+H V T V+V T+L+D+Y+ K G+
Sbjct: 306 VHSLVVKRMIKTDVFVGTSLMDMYA-------------------------------KCGE 334
Query: 186 LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
+ + + +FD + ++ ++W S+I+ +++ G ++A SLF+ M R+L + N + + +
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 246 ----GSILSAREVFDAMPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY 297
G++L +E+ + K +N T++ Y K G+ A + Q+ +D++S+
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSW 454
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
AMI+ + EAL+ M++ V P+ T +S + AC+ L R I S
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQE--GVEPNPFTYSSALKACANSESLLIGRSIHSIA 512
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
+ + + +AL+ +YAK G + +A+ +F + +++LV++ AMI G+ NG +A+
Sbjct: 513 KKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREAL 572
Query: 418 KLFEQMLGENIGPNLVTYTGILTA 441
KL +M E + + IL+
Sbjct: 573 KLMYRMEAEGFEVDDYIFATILST 596
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 180/360 (50%), Gaps = 14/360 (3%)
Query: 158 ARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNM 217
A K FD+ + N+L+S ++ GDL A+ +FD +P K+ ++W +MI GY K G
Sbjct: 108 ALKCFDDQV---IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLE 164
Query: 218 DQANSLFQKMPERNLASWN-TMIAGYIDSGSILS----AREVFDAMPKRNSVSLI---TM 269
D+A +LF+ + + N M ++ S + R+V M K +LI ++
Sbjct: 165 DEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSL 224
Query: 270 IAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHP 329
+ Y++ G++ SA + FD M+EKD++S+ A+I+ ++ +A+ +F ML P
Sbjct: 225 VYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWF--LP 282
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
++ T+ S++ ACS+ L R + S + + D + T+L+D+YAK G I ++F
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 390 HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
G+ R+ V ++++I G +AI LF M ++ N +T IL A G +
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLAC 509
G + N + V +V L + G +A+ ++ +P++ + W A++ C
Sbjct: 403 LGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSR-DVVSWTAMISGC 461
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/457 (24%), Positives = 209/457 (45%), Gaps = 50/457 (10%)
Query: 73 GCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHV 132
GCV + + E + M++ P A ++ + + + + +++ Q+
Sbjct: 142 GCV-----KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE 196
Query: 133 LGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDE 188
LGY+ V++ T L+ ++K G V +A + DEM + ++V +N + + K G +D
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 189 AQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLA-----SWNTMI 239
A F +I D +++ SMI KA +D+A +F+ + E+N ++NTMI
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL-EKNRRVPCTYAYNTMI 315
Query: 240 AGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDE---K 292
GY +G A + + + S+ + ++ K G VD A K+F++M +
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAP 375
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKP-------EINVHPDKMTLASVI-SACSQL 344
+L +YN +I + K A EL + M K +N+ D++ + + AC+
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 345 GDLEHWRWIESHINDFGVVLDDHLA-TALVDLYAKSGSIDKAYELFHGLRKRDL----VA 399
++ D+ V D + +L+D K G +D AY+++ + D +
Sbjct: 436 EEM-----------DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
Y+++I F +GR D K+++ M+ +N P+L + AG E+G F +K
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 460 DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ 496
VP Y I++ L +AG+ +E YEL +M Q
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 131/600 (21%), Positives = 247/600 (41%), Gaps = 99/600 (16%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLH 65
L +M +C + QI + + G I +L N + V ++
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 163
Query: 66 NPDSFS-WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+FS + +I FS ++L+ QMQ +G PT H ++ ++ A+ +
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA------------------ 166
S+ ++ D + + +D + K+G V A K F E+
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 167 ----------------EKN-----VVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DV 201
EKN ++N+++ GY AG DEA L ++ K V
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSV 343
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMPER---NLASWNTMIAGYIDSGSILSAREVFDAM 258
I++N +++ K G +D+A +F++M + NL+++N +I +G + +A E+ D+M
Sbjct: 344 IAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSM 403
Query: 259 PKR---------------------------------------NSVSLITMIAGYSKSGDV 279
K + ++ ++I G K G V
Sbjct: 404 QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRV 463
Query: 280 DSAHKLFDQMDEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
D A+K++++M + D + Y ++I + + + ++ +++ M+ N PD L
Sbjct: 464 DDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ--NCSPDLQLLN 521
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
+ + + G+ E R + I V D + L+ K+G ++ YELF+ ++++
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 396 ----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
D AY+ +I GF G+ + A +L E+M + P +VTY ++ ++E
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 452 YWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAY---ELIINMPTQPNADVWGALLLA 508
Y F K + V Y ++D G+ G +DEAY E ++ PN W +LL A
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/502 (22%), Positives = 211/502 (42%), Gaps = 66/502 (13%)
Query: 56 YVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA 115
+ H I N PD ++ +I + + EAV ++ +++ P ++A ++ +
Sbjct: 260 FFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG 319
Query: 116 RIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM---AEKNVVS 172
S+ + G V +L KMG V A KVF+EM A N+ +
Sbjct: 320 SAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST 379
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKMP 228
+N L+ +AG LD A L D + +V + N M+ K+ +D+A ++F++M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 229 ER----NLASWNTMIAGYIDSGSILSAREVFDAM----PKRNSVSLITMIAGYSKSGDVD 280
+ + ++ ++I G G + A +V++ M + NS+ ++I + G +
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 281 SAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVH---PDKMT 333
HK++ M + DL N + C + +P++ +F EI PD +
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE-----EIKARRFVPDARS 554
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+ +I + G + + + G VLD ++D + K G ++KAY+L ++
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 394 KR---------------------------------------DLVAYSAMIYGFGINGRAS 414
+ ++V YS++I GFG GR
Sbjct: 615 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 674
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMV 474
+A + E+++ + + PNL T+ +L A A + E CF SMK+ P YGI++
Sbjct: 675 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILI 734
Query: 475 DLLGRAGWLDEAYELIINMPTQ 496
+ L + ++A+ M Q
Sbjct: 735 NGLCKVRKFNKAFVFWQEMQKQ 756
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 201/452 (44%), Gaps = 34/452 (7%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ ++ +I + G+ A L MQ+ GL P ++ + + Q ++
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 127 HGQVHVLGYDTCVYVQ---TALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSG 179
+ + Y C + +L+D K+G V A KV+++M N + + SL+
Sbjct: 435 FEE---MDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 180 YLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLA-- 233
+ G ++ ++ + + D+ N+ + KAG ++ ++F+++ R
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPD 551
Query: 234 --SWNTMIAGYIDSGSILSAREVFDAMPKRNSV----SLITMIAGYSKSGDVDSAHKLFD 287
S++ +I G I +G E+F +M ++ V + +I G+ K G V+ A++L +
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 288 QMD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
+M E +++Y ++I A+ + EA LF I ++ + +S+I +
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNV--VIYSSLIDGFGK 669
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAM 403
+G ++ I + G+ + + +L+D K+ I++A F +++ + +
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP-NQV 728
Query: 404 IYGFGING-----RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
YG ING + + A +++M + + P+ ++YT +++ AG + E F+
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 459 KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI 490
K NG VP Y M++ L +A+ L
Sbjct: 789 KANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 171/385 (44%), Gaps = 26/385 (6%)
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
+ + PD ++ +I + G+ +A +Y +M S +S +K+ K
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNSLL 177
G I+ + + + +D K G+ R +F+E+ + V S++ L+
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 178 SGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----E 229
G +KAG +E LF + + D ++N +I G+ K G +++A L ++M E
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 230 RNLASWNTMIAGYIDSGSILSAREVFD-AMPKR---NSVSLITMIAGYSKSGDVDSAHKL 285
+ ++ ++I G + A +F+ A KR N V ++I G+ K G +D A+ +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 286 FDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
+++ +K +L ++N+++ + + EAL F M E+ P+++T +I+
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGL 737
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DL 397
++ + G+ T ++ AK+G+I +A LF + D
Sbjct: 738 CKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQ 422
Y+AMI G RA DA LFE+
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEE 822
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 231/476 (48%), Gaps = 39/476 (8%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCP----TSHAISSALKSCARIQDKLG 122
PD FS+ VIR F + + +A+ L +M+ G C T + A ++ + +G
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSG-CSWSLVTWGILIDAFCKAGKMDEAMG 233
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKN----VVSWNSLLS 178
+ ++ +G + + V T+L+ + G++ + +FDE+ E+ +++N+L+
Sbjct: 234 FLK---EMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 179 GYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQA----NSLFQKMPER 230
G+ K G L EA +F+ + + +V ++ +I G G +A N + +K E
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 231 NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLF 286
N ++N +I G + A E+ + M KR ++++ ++ G GD+D A KL
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 287 DQM------DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA 340
M + D++SYNA+I + ++ +AL++++ ++ E D++T ++++
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLV--EKLGAGDRVTTNILLNS 468
Query: 341 CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL--- 397
+ GD+ + I+D +V + TA++D + K+G ++ A L +R +L
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPS 528
Query: 398 -VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
Y+ ++ G A +LFE+M +N P++V++ ++ AG ++
Sbjct: 529 VFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 457 SMKDNGLVPLVDHYGIMVDLLGRAGWLDEA---YELIINMPTQPNADVWGALLLAC 509
M GL P + Y +++ + G+LDEA ++ +++ +P+A + ++L C
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 159/370 (42%), Gaps = 25/370 (6%)
Query: 44 LWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPT 103
L V K ++ ++ P++ ++ +I + G +AV + M++ P
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 104 SHAISSALKS-CARIQDKLGGVSIHGQVHVLGY-DTCVYVQTALLDLYSKMGDVGTARKV 161
+ + L CA+ ++ + Y D V AL+ K + A +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 162 FDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVI----SWNSMISGYSK 213
+D + EK + V+ N LL+ LKAGD+++A L+ +I ++ ++ +MI G+ K
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK 506
Query: 214 AGNMDQANSLFQKMPERNLA----SWNTMIAGYIDSGSILSAREVFDAMPKRNS----VS 265
G ++ A L KM L +N +++ GS+ A +F+ M + N+ VS
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 266 LITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYML 321
MI G K+GD+ SA L M DL +Y+ +I + + EA+ F+ M+
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV 626
Query: 322 KPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVD-LYAKSG 380
PD SV+ C G+ + + + D +VLD L ++D + S
Sbjct: 627 DS--GFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSA 684
Query: 381 SIDKAYELFH 390
++D A L
Sbjct: 685 NMDLAKRLLR 694
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 142/321 (44%), Gaps = 21/321 (6%)
Query: 205 NSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVFDAMPK 260
N++++ ++ N + A S ++KM E N S + ++ Y+ A V M K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 261 R----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKE 312
R N + ++ G ++ + A L +M D+ SYN +I + + + ++
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 313 ALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATAL 372
ALEL N M +T +I A + G ++ + G+ D + T+L
Sbjct: 196 ALELANEMKGS--GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSL 253
Query: 373 VDLYAKSGSIDKAYELFHGLRKRD----LVAYSAMIYGFGINGRASDAIKLFEQMLGENI 428
+ + G +D+ LF + +R + Y+ +I GF G+ +A ++FE M+ +
Sbjct: 254 IRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Query: 429 GPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYE 488
PN+ TYTG++ G +E N M + P Y I+++ L + G + +A E
Sbjct: 314 RPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVE 373
Query: 489 LIINMP---TQPNADVWGALL 506
++ M T+P+ + LL
Sbjct: 374 IVELMKKRRTRPDNITYNILL 394
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 157/394 (39%), Gaps = 55/394 (13%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+L +P + ++ +IR F + GQ EA ++ M G+ P + + + +
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK 332
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNS 175
+ + + + +++ K G V A ++ + M ++ +++N
Sbjct: 333 TKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 176 LLSGYLKAGDLDEAQHLF------DKIPGKDVISWNSMISGYSKAGNMDQA----NSLFQ 225
LL G GDLDEA L DVIS+N++I G K + QA + L +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 226 KMPERNLASWNTMIAGYIDSGSILSA----REVFDAMPKRNSVSLITMIAGYSKSGDVDS 281
K+ + + N ++ + +G + A +++ D+ RNS + MI G+ K+G ++
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 282 AHKLFDQMDEKDL----LSYNAMIACYAQNSKPKEALELFNYMLK----PEI-------- 325
A L +M +L YN +++ + +A LF M + P++
Sbjct: 513 AKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMID 572
Query: 326 ---------------------NVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVL 364
+ PD T + +I+ +LG L+ + D G
Sbjct: 573 GSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEP 632
Query: 365 DDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV 398
D H+ +++ G DK EL L +D+V
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKDIV 666
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 220/473 (46%), Gaps = 40/473 (8%)
Query: 50 YKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISS 109
++P + +LH L D S + + + F+EAV+L+ QM +GL P ++
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 110 ALK---------SCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARK 160
+ A + +K+ G +H + V+ Y T +++ KMGD +A
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLH--IDVVTYGT-------IVNGMCKMGDTKSALN 282
Query: 161 VFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYS 212
+ +M E +VV +++++ K G +AQ+LF ++ K +V ++N MI G+
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 213 KAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSV 264
G A L + M ER ++ ++N +I+ + G + A ++ D M R ++V
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
+ +MI G+ K D A +FD M D++++N +I Y + + E ++L + +
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR- 461
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
+ + T ++I ++ +L + + + GV D L+ + ++ +++
Sbjct: 462 -GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 385 AYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
A ELF ++ D VAY+ +I+G + +A LF + + P++ TY +++
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 441 AYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
+ + + F+ MKDNG P Y ++ +AG +D++ ELI M
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 217/465 (46%), Gaps = 55/465 (11%)
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
+S+ +I+ F + ++S + ++ ++G P ++ L ++D+ I
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC-LEDR-----ISEA 195
Query: 130 VHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKN----VVSWNSLLSGYLKAGD 185
+ + GY V+T L+ A +FD+M E V+++N+L++G G
Sbjct: 196 LALFGY----MVETGFLE----------AVALFDQMVEIGLTPVVITFNTLINGLCLEGR 241
Query: 186 LDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAG 241
+ EA L +K+ GK DV+++ ++++G K G+ A +L KM E ++ + +
Sbjct: 242 VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSA 301
Query: 242 YID----SGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK- 292
ID G A+ +F M ++ N + MI G+ G A +L M E+
Sbjct: 302 IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE 361
Query: 293 ---DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
D+L++NA+I+ + K EA +L + ML I PD +T S+I G +H
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI--FPDTVTYNSMI-----YGFCKH 414
Query: 350 WRWIES-HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSAMI 404
R+ ++ H+ D D ++D+Y ++ +D+ +L + +R LVA Y+ +I
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV 464
+GF + A LF++M+ + P+ +T +L + +EE F ++ + +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALL 506
Y I++ + + +DEA++L ++P +P+ + ++
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 169/350 (48%), Gaps = 32/350 (9%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCP---TSHAISSALKSCARIQD--KL 121
PD + +I + G +A L+ +M G+ P T + + S R D +L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 122 GGVSIHGQVH--VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNS 175
I +++ VL ++ AL+ K G + A K+ DEM + + V++NS
Sbjct: 354 LRDMIEREINPDVLTFN-------ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER----N 231
++ G+ K D+A+H+FD + DV+++N++I Y +A +D+ L +++ R N
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 232 LASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFD 287
++NT+I G+ + ++ +A+++F M ++++ ++ G+ ++ ++ A +LF+
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 288 --QMDEKDL--LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
QM + DL ++YN +I + SK EA +LF + P V PD T +IS
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL--PIHGVEPDVQTYNVMISGFCG 584
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+ + + D G D+ L+ K+G IDK+ EL +R
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 172/419 (41%), Gaps = 70/419 (16%)
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSLF 224
N+ S+N L+ + L + F K+ DV+++N+++ G + +A +LF
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 225 QKMPERN-------------------LASWNTMIAGYIDSGSILSAREVFDAMPKR---- 261
M E + ++NT+I G G +L A + + M +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 262 NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELF 317
+ V+ T++ G K GD SA L +M+E D++ Y+A+I ++ +A LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW----------IESHINDFGVVLDDH 367
+ ML E + P+ T +I G RW IE IN D
Sbjct: 320 SEML--EKGIAPNVFTYNCMIDGFCSFG-----RWSDAQRLLRDMIEREINP-----DVL 367
Query: 368 LATALVDLYAKSGSIDKAY----ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
AL+ K G + +A E+ H D V Y++MIYGF + R DA +F+ M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
P++VT+ I+ Y A V+EG + GLV Y ++ L
Sbjct: 428 ----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 484 DEAYELIINMPTQ---PNADVWGALLLA-C---RLHNNVELGEIAVQHCIKLESDTVGY 535
+ A +L M + P+ LL C +L +EL E+ K++ DTV Y
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS--KIDLDTVAY 540
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 155/369 (42%), Gaps = 41/369 (11%)
Query: 178 SGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPER--- 230
S Y K+ LD+A FD + P + N +I + + D A SL++KM R
Sbjct: 81 SHYFKS--LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMPK-------------------RNSVSLITMI 270
N+ S+N +I + D + + F + K + +S +
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 271 AGYSKSGDVDSAHKLFDQMDEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
GY A LFDQM E L +++N +I + EA L N M+
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK--G 256
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
+H D +T ++++ ++GD + + S + + + D + +A++D K G A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 387 ELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAY 442
LF + ++ ++ Y+ MI GF GR SDA +L M+ I P+++T+ +++A
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 443 NHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVW 502
G + E + M + P Y M+ + D+A + ++ P+ +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-FDLMASPDVVTF 435
Query: 503 GALL-LACR 510
++ + CR
Sbjct: 436 NTIIDVYCR 444
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/473 (23%), Positives = 220/473 (46%), Gaps = 40/473 (8%)
Query: 50 YKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISS 109
++P + +LH L D S + + + F+EAV+L+ QM +GL P ++
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 110 ALK---------SCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARK 160
+ A + +K+ G +H + V+ Y T +++ KMGD +A
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLH--IDVVTYGT-------IVNGMCKMGDTKSALN 282
Query: 161 VFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYS 212
+ +M E +VV +++++ K G +AQ+LF ++ K +V ++N MI G+
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 213 KAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSV 264
G A L + M ER ++ ++N +I+ + G + A ++ D M R ++V
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
+ +MI G+ K D A +FD M D++++N +I Y + + E ++L + +
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR- 461
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
+ + T ++I ++ +L + + + GV D L+ + ++ +++
Sbjct: 462 -GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 385 AYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
A ELF ++ D VAY+ +I+G + +A LF + + P++ TY +++
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 441 AYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
+ + + F+ MKDNG P Y ++ +AG +D++ ELI M
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 217/475 (45%), Gaps = 50/475 (10%)
Query: 75 VIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLG 134
VI F + + A+SLY +M+ + ++ + +K +S G++ LG
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 135 YDTCVYVQTALLD-------------LYSKMGDVG--TARKVFDEMAEKN----VVSWNS 175
+ V LL L+ M + G A +FD+M E V+++N+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERN 231
L++G G + EA L +K+ GK DV+++ ++++G K G+ A +L KM E +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 232 LASWNTMIAGYIDS----GSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAH 283
+ + + ID G A+ +F M ++ N + MI G+ G A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 284 KLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVIS 339
+L M E+ D+L++NA+I+ + K EA +L + ML I PD +T S+I
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI--FPDTVTYNSMI- 408
Query: 340 ACSQLGDLEHWRWIES-HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV 398
G +H R+ ++ H+ D D ++D+Y ++ +D+ +L + +R LV
Sbjct: 409 ----YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 399 A----YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
A Y+ +I+GF + A LF++M+ + P+ +T +L + +EE
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 455 FNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALL 506
F ++ + + Y I++ + + +DEA++L ++P +P+ + ++
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 169/350 (48%), Gaps = 32/350 (9%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCP---TSHAISSALKSCARIQD--KL 121
PD + +I + G +A L+ +M G+ P T + + S R D +L
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 122 GGVSIHGQVH--VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNS 175
I +++ VL ++ AL+ K G + A K+ DEM + + V++NS
Sbjct: 354 LRDMIEREINPDVLTFN-------ALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER----N 231
++ G+ K D+A+H+FD + DV+++N++I Y +A +D+ L +++ R N
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 232 LASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFD 287
++NT+I G+ + ++ +A+++F M ++++ ++ G+ ++ ++ A +LF+
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 288 --QMDEKDL--LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
QM + DL ++YN +I + SK EA +LF + P V PD T +IS
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSL--PIHGVEPDVQTYNVMISGFCG 584
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
+ + + D G D+ L+ K+G IDK+ EL +R
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 172/419 (41%), Gaps = 70/419 (16%)
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSLF 224
N+ S+N L+ + L + F K+ DV+++N+++ G + +A +LF
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 225 QKMPERN-------------------LASWNTMIAGYIDSGSILSAREVFDAMPKR---- 261
M E + ++NT+I G G +L A + + M +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 262 NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELF 317
+ V+ T++ G K GD SA L +M+E D++ Y+A+I ++ +A LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW----------IESHINDFGVVLDDH 367
+ ML E + P+ T +I G RW IE IN D
Sbjct: 320 SEML--EKGIAPNVFTYNCMIDGFCSFG-----RWSDAQRLLRDMIEREINP-----DVL 367
Query: 368 LATALVDLYAKSGSIDKAY----ELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
AL+ K G + +A E+ H D V Y++MIYGF + R DA +F+ M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
P++VT+ I+ Y A V+EG + GLV Y ++ L
Sbjct: 428 ----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 484 DEAYELIINMPTQ---PNADVWGALLLA-C---RLHNNVELGEIAVQHCIKLESDTVGY 535
+ A +L M + P+ LL C +L +EL E+ K++ DTV Y
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS--KIDLDTVAY 540
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 155/369 (42%), Gaps = 41/369 (11%)
Query: 178 SGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPER--- 230
S Y K+ LD+A FD + P + N +I + + D A SL++KM R
Sbjct: 81 SHYFKS--LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMPK-------------------RNSVSLITMI 270
N+ S+N +I + D + + F + K + +S +
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 271 AGYSKSGDVDSAHKLFDQMDEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
GY A LFDQM E L +++N +I + EA L N M+
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK--G 256
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
+H D +T ++++ ++GD + + S + + + D + +A++D K G A
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 387 ELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAY 442
LF + ++ ++ Y+ MI GF GR SDA +L M+ I P+++T+ +++A
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 376
Query: 443 NHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVW 502
G + E + M + P Y M+ + D+A + ++ P+ +
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM-FDLMASPDVVTF 435
Query: 503 GALL-LACR 510
++ + CR
Sbjct: 436 NTIIDVYCR 444
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 209/453 (46%), Gaps = 26/453 (5%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ PD + ++ F + +AVSL QM MG P S ++ + R V
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGY 180
++ ++ V G + +++ K GD+ A + +M E VV +N+++
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
++++A +LF ++ K +V+++NS+I G A+ L M ER N+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
+++ +I ++ G ++ A +++D M KR + + ++I G+ +D A +F+
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 289 MDEKD----LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M KD +++YN +I + + + E +ELF M + + + +T ++I Q
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIHGFFQA 444
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAY 400
+ ++ + + + GV+ D + L+D +G ++ A +F L++ D+ Y
Sbjct: 445 RECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ MI G G+ D LF + + + PN+VTYT +++ + GL EE F MK+
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
G +P Y ++ R G + ELI M
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/481 (23%), Positives = 221/481 (45%), Gaps = 44/481 (9%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA---R 116
I HNL +++ +I F ++ Q A+++ +M ++G P ++S L R
Sbjct: 112 ISHNL-----YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVS 172
I D VS+ GQ+ +GY + L+ + A + D M K ++V+
Sbjct: 167 ISD---AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQK 226
+ +++G K GD+D A L K+ PG V+ +N++I N++ A +LF +
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG--VVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 227 MPER----NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGD 278
M + N+ ++N++I + G A + M +R N V+ +I + K G
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 279 VDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTL 334
+ A KL+D+M ++ D+ +Y+++I + + + EA +F M+ + P+ +T
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTY 399
Query: 335 ASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK 394
++I + ++ + ++ G+V + T L+ + ++ D A +F +
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 395 R----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEE 450
D++ YS ++ G NG+ A+ +FE + + P++ TY ++ AG VE+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 451 GYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLL 507
G+ F S+ G+ P V Y M+ R G +EA L M + P++ + L+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 508 A 508
A
Sbjct: 580 A 580
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 231/478 (48%), Gaps = 42/478 (8%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-CARIQDKLGGVS 125
P + ++ ++ +F +SL QMQ +G+ + S + C R Q L ++
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSL-ALA 137
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYL 181
+ ++ LGY+ + +LL+ + + A + +M E + ++N+L+ G
Sbjct: 138 VLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLF 197
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLA 233
+ EA L D++ K D++++ +++G K G++D A SL +KM E +
Sbjct: 198 RHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV 257
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+NT+I + ++ A +F M + N V+ ++I G A +L M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 290 DEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
E+ ++++++A+I + + K EA +L++ M+K I+ PD T +S+I+ G
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLIN-----G 370
Query: 346 DLEHWRWIES-HINDFGVVLD--DHLAT--ALVDLYAKSGSIDKAYELFHGLRKRDL--- 397
H R E+ H+ + + D ++ T L+ + K+ +D+ ELF + +R L
Sbjct: 371 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Query: 398 -VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
V Y+ +I+GF +A +F+QM+ + + P+++TY+ +L + G VE F
Sbjct: 431 TVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Query: 457 SMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLA-CR 510
++ + + P + Y IM++ + +AG +++ ++L ++ +PN + ++ CR
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 240/517 (46%), Gaps = 35/517 (6%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
+ ++ ++ G E +Y++M +CP + + + ++ + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 132 VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYLKAGDLD 187
G D + T+L+ Y + D+ +A KVF+EM +N V++ L+ G A +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 188 EAQHLFDKIPGKD----VISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMI 239
EA LF K+ + V ++ +I + +A +L ++M E N+ ++ +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 240 AGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL- 294
ARE+ M ++ N ++ +I GY K G ++ A + + M+ + L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 295 ---LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+YN +I Y +++ K A+ + N ML E V PD +T S+I + G+ +
Sbjct: 426 PNTRTYNELIKGYCKSNVHK-AMGVLNKML--ERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGF 407
+ S +ND G+V D T+++D KS +++A +LF L ++ ++V Y+A+I G+
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV 467
G+ +A + E+ML +N PN +T+ ++ G ++E M GL P V
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 468 DHYGIMVDLLGRAGWLDEAY---ELIINMPTQPNADVWGALLLA-CRLHNNVELGEIAVQ 523
I++ L + G D AY + +++ T+P+A + + CR ++ ++ +
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Query: 524 HCIKLESDTVGYYSLLSSIYANLGR----WDDAKKLR 556
S + YS L Y +LG+ +D K++R
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 133/591 (22%), Positives = 243/591 (41%), Gaps = 85/591 (14%)
Query: 47 VNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKG----------------------- 83
+ N + + YV I+ +PD F++ +I + Q+
Sbjct: 231 LGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVA 290
Query: 84 ------------QFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
+ EA+ L+V+M+ PT + +KS + K +++ ++
Sbjct: 291 YTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 132 VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLD 187
G ++ T L+D AR++ +M EK NV+++N+L++GY K G ++
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 188 EAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMI 239
+A + + + + + ++N +I GY K+ N+ +A + KM ER ++ ++N++I
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 240 AGYIDSGSILSAREVFDAMPKRNSV----SLITMIAGYSKSGDVDSAHKLFDQMDEK--- 292
G SG+ SA + M R V + +MI KS V+ A LFD +++K
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 529
Query: 293 -DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+++ Y A+I Y + K EA + ML N P+ +T ++I G L+
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK--NCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL----RKRDLVAYSAMIYGF 407
+E + G+ T L+ K G D AY F + K D Y+ I +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP-- 465
GR DA + +M + P+L TY+ ++ Y G + M+D G P
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 466 -----LVDHY---------GIMVDLLGRAGWLD-----EAYELIINMPTQPNADVWGALL 506
L+ H G +L + ++ E E ++ PNA + L+
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 507 LACRLHNNVELGEIAVQHCIKLE--SDTVGYYSLLSSIYANLGRWDDAKKL 555
L N+ + E H + E S + ++ L S L + ++A K+
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 201/446 (45%), Gaps = 69/446 (15%)
Query: 122 GGVSIHGQVHVLGYDTCVYVQTAL--LDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSG 179
G V + ++ +L +C V AL LDL KM + F+ + + +N+LL+
Sbjct: 137 GYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMN----KDERFELKYKLIIGCYNTLLNS 192
Query: 180 YLKAGDLDEAQHLF-----DKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA- 233
+ G +DE + ++ DK+ ++ ++N M++GY K GN+++AN K+ E L
Sbjct: 193 LARFGLVDEMKQVYMEMLEDKV-CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP 251
Query: 234 ---SWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLF 286
++ ++I GY + SA +VF+ MP +RN V+ +I G + +D A LF
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 287 DQMDEKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI-SAC 341
+M + + +Y +I + + EAL L M E + P+ T +I S C
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM--EETGIKPNIHTYTVLIDSLC 369
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR------ 395
SQ E R + + + G++ + AL++ Y K G I+ A ++ + R
Sbjct: 370 SQC-KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 396 --------------------------------DLVAYSAMIYGFGINGRASDAIKLFEQM 423
D+V Y+++I G +G A +L M
Sbjct: 429 RTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
+ P+ TYT ++ + + VEE F+S++ G+ P V Y ++D +AG +
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 484 DEAYELIINMPTQ---PNADVWGALL 506
DEA+ ++ M ++ PN+ + AL+
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALI 574
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 204/504 (40%), Gaps = 85/504 (16%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCAR--IQDKLGGV 124
P+ ++ +I + ++G +AV + M+ L P + + +K + + +G +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNSLLSGY 180
+ + VL D Y +L+D + G+ +A ++ M ++ +V ++ S++
Sbjct: 451 NKMLERKVLP-DVVTY--NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLA--- 233
K+ ++EA LFD + K +V+ + ++I GY KAG +D+A+ + +KM +N
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 234 -SWNTMIAGYIDSGSILSAREVFDAMPK---RNSVSLIT-MIAGYSKSGDVDSAHKLFDQ 288
++N +I G G + A + + M K + +VS T +I K GD D A+ F Q
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 289 M----DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M + D +Y I Y + + +A ++ M E V PD T +S+I L
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM--RENGVSPDLFTYSSLIKGYGDL 685
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALV----------------DLYAKSG--SIDKAY 386
G + + D G H +L+ +L A S D
Sbjct: 686 GQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 387 ELFHGLRKRDLV----AYSAMIYGFGINGRASDAIKLFEQM-LGENIGPNLVTYTGILTA 441
EL + + + +Y +I G G A K+F+ M E I P+ + + +L+
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 442 ------YNHAGLV-----------------------------EEGYWCFNSMKDNGLVPL 466
+N A V E G F ++ G
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 467 VDHYGIMVDLLGRAGWLDEAYELI 490
+ I++D +G+ G ++ YEL
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELF 889
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 184/456 (40%), Gaps = 53/456 (11%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD ++ +I + G F A L M GL P +S + S + + +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNSLLSGYLK 182
+ G + V + TAL+D Y K G V A + ++M KN +++N+L+ G
Sbjct: 520 FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCA 579
Query: 183 AGDLDEAQHLFD---KIPGKDVISWNS-MISGYSKAGNMDQANSLFQKM----PERNLAS 234
G L EA L + KI + +S ++ +I K G+ D A S FQ+M + + +
Sbjct: 580 DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVS--LIT---MIAGYSKSGDVDSAHKLFDQM 289
+ T I Y G +L A ++ M + N VS L T +I GY G + A + +M
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 290 DE--------------KDLLSYNAMIACYAQNSKPK-----------EALELFNYMLKPE 324
+ K LL M + S+P+ +EL M+ E
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLE---MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV--E 753
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHIN-DFGVVLDDHLATALVDLYAKSGSID 383
+V P+ + +I ++G+L + H+ + G+ + + AL+ K +
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHN 813
Query: 384 KAYELFHGL----RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
+A ++ + L + +I G G +F+ +L + + + I+
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Query: 440 TAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD 475
GLVE Y FN M+ NG Y ++++
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 227/479 (47%), Gaps = 40/479 (8%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-C--AR 116
I+H L +++ +I F ++ Q A++L +M ++G P+ +SS L C R
Sbjct: 116 IVHGL-----YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTAL---LDLYSKMGD-VGTARKVFDEMAEKNVVS 172
I D V++ Q+ +GY T L L L++K + V ++ + N+V+
Sbjct: 171 ISD---AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP 228
+ +++G K GD D A +L +K+ DV+ +N++I K ++D A +LF++M
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 229 ER----NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVD 280
+ N+ +++++I+ G A ++ M ++ N V+ +I + K G
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 281 SAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
A KL+D M ++ D+ +YN+++ + + + +A ++F +M+ + PD +T +
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD--CFPDVVTYNT 405
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR- 395
+I + +E + ++ G+V D T L+ G D A ++F +
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 396 ---DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
D++ YS ++ G NG+ A+++F+ M I ++ YT ++ AG V++G+
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 453 WCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLA 508
F S+ G+ P V Y M+ L L EAY L+ M PN+ + L+ A
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 196/428 (45%), Gaps = 26/428 (6%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+A+ L+ M + P+ + L + A+++ +S+ ++ L +Y L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 147 DLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP----G 198
+ + + + A + +M E ++V+ +SLL+GY + +A L D++
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREV 254
D I++ ++I G +A +L +M +R NL ++ ++ G G A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 255 FDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQ 306
+ M + + V T+I K VD A LF +M+ K ++++Y+++I+C
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
+ +A +L + M++ +IN P+ +T ++I A + G + + + D
Sbjct: 308 YGRWSDASQLLSDMIEKKIN--PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLRKRD----LVAYSAMIYGFGINGRASDAIKLFEQ 422
+LV+ + +DKA ++F + +D +V Y+ +I GF + R D +LF +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 423 MLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGW 482
M + + VTYT ++ H G + F M +G+ P + Y I++D L G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 483 LDEAYELI 490
L++A E+
Sbjct: 486 LEKALEVF 493
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 140/314 (44%), Gaps = 59/314 (18%)
Query: 54 SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
S + ++ NP+ ++ +I F ++G+F+EA LY M + + P
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD---------- 364
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----N 169
++ +L++ + + A+++F+ M K +
Sbjct: 365 -------------------------IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 170 VVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQ 225
VV++N+L+ G+ K+ +++ LF ++ + D +++ ++I G G+ D A +F+
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 226 KMPER----NLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSL-----ITMIAGYSKS 276
+M ++ +++ ++ G ++G + A EVFD M K + + L TMI G K+
Sbjct: 460 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTTMIEGMCKA 518
Query: 277 GDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
G VD LF + K ++++YN MI+ +EA L M E P+
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPLPNSG 576
Query: 333 TLASVISACSQLGD 346
T ++I A + GD
Sbjct: 577 TYNTLIRAHLRDGD 590
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 197/414 (47%), Gaps = 36/414 (8%)
Query: 132 VLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDL 186
VL D+C VY+ D Y TA VF E E NV S+N ++ + G +
Sbjct: 207 VLSVDSCNVYLTRLSKDCYK----TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 262
Query: 187 DEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGY 242
EA HL + K DVIS++++++GY + G +D+ L + M + L N+ I G
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP-NSYIYGS 321
Query: 243 I-----DSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKD 293
I + A E F M ++ ++V T+I G+ K GD+ +A K F +M +D
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 294 L----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
+ L+Y A+I+ + Q EA +LF+ M + PD +T +I+ + G ++
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKD 439
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK----RDLVAYSAMIY 405
+ +H+ G + T L+D K G +D A EL H + K ++ Y++++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
G +G +A+KL + + + VTYT ++ AY +G +++ M GL P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLACRLHNNVE 516
+ + ++++ G L++ +L+ M + PNA + +L+ + NN++
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 213/488 (43%), Gaps = 72/488 (14%)
Query: 45 WDVNNYKPLSHYVHPI-----LHNL--------HNPDSFSWGCVIRFFSQKGQFIEAVSL 91
W+V +Y + H+V + H+L + PD S+ V+ + + G+ + L
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 92 YVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY--DTCVYVQTALLDLY 149
M+R GL P S+ S + RI ++ G DT VY T L+D +
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY--TTLIDGF 361
Query: 150 SKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DV 201
K GD+ A K F EM + +V+++ +++SG+ + GD+ EA LF ++ K D
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 202 ISWNSMISGYSKAGNMDQA----NSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDA 257
+++ +I+GY KAG+M A N + Q N+ ++ T+I G G + SA E+
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 258 MPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSK 309
M K N + +++ G KSG+++ A KL + + D ++Y ++ Y ++ +
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 310 PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA 369
+A E+ ML + P +T +++ G LE D +L+ LA
Sbjct: 542 MDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE----------DGEKLLNWMLA 589
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG 429
+ + +++++ + I A +++ M +G
Sbjct: 590 KGIAP---------------------NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 430 PNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD-LLGRAGWLDEAYE 488
P+ TY ++ + A ++E ++ F MK G V Y +++ L R +L EA E
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL-EARE 687
Query: 489 LIINMPTQ 496
+ M +
Sbjct: 688 VFDQMRRE 695
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 188/390 (48%), Gaps = 26/390 (6%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
P+S+ +G +I + + EA + +M R G+ P + ++ + + D
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYL 181
++H V TA++ + ++GD+ A K+F EM E + V++ L++GY
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 182 KAGDLDEA----QHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM----PERNLA 233
KAG + +A H+ +V+++ ++I G K G++D AN L +M + N+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 234 SWNTMIAGYIDSGSILSAREV---FDAMP-KRNSVSLITMIAGYSKSGDVDSAHKLFDQM 289
++N+++ G SG+I A ++ F+A ++V+ T++ Y KSG++D A ++ +M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 290 DEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
K L +++N ++ + + ++ +L N+ML + P+ T S++
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK--GIAPNATTFNSLVKQYCIRN 610
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYS 401
+L+ I + GV D LV + K+ ++ +A+ LF ++ + + YS
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPN 431
+I GF + +A ++F+QM E + +
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 180/413 (43%), Gaps = 70/413 (16%)
Query: 184 GDLDEAQHLFDKIPGKDVI----SWNSMISGYSK-AGNMDQANSLFQKMPER----NLAS 234
G L EA+ +F+K+ ++ S N ++ SK A +F++ PE N+AS
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+N +I G I A + M + + +S T++ GY + G++D KL + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 291 EKDLLS----YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
K L Y ++I + K EA E F+ M++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ----------------------- 345
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSA 402
G++ D + T L+D + K G I A + F+ + RD+ + Y+A
Sbjct: 346 --------------GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+I GF G +A KLF +M + + P+ VT+T ++ Y AG +++ + N M G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINM---PTQPNADVWGALLLACRLHNNVE--- 516
P V Y ++D L + G LD A EL+ M QPN + +++ N+E
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 517 --LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKT 567
+GE L +DTV Y +L+ + Y G D A+++ + GK + T
Sbjct: 512 KLVGEFEAAG---LNADTVTYTTLMDA-YCKSGEMDKAQEILKEMLGKGLQPT 560
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 197/414 (47%), Gaps = 36/414 (8%)
Query: 132 VLGYDTC-VYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDL 186
VL D+C VY+ D Y TA VF E E NV S+N ++ + G +
Sbjct: 207 VLSVDSCNVYLTRLSKDCYK----TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 262
Query: 187 DEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGY 242
EA HL + K DVIS++++++GY + G +D+ L + M + L N+ I G
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP-NSYIYGS 321
Query: 243 I-----DSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKD 293
I + A E F M ++ ++V T+I G+ K GD+ +A K F +M +D
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 294 L----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
+ L+Y A+I+ + Q EA +LF+ M + PD +T +I+ + G ++
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK--GLEPDSVTFTELINGYCKAGHMKD 439
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK----RDLVAYSAMIY 405
+ +H+ G + T L+D K G +D A EL H + K ++ Y++++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
G +G +A+KL + + + VTYT ++ AY +G +++ M GL P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLACRLHNNVE 516
+ + ++++ G L++ +L+ M + PNA + +L+ + NN++
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 213/488 (43%), Gaps = 72/488 (14%)
Query: 45 WDVNNYKPLSHYVHPI-----LHNL--------HNPDSFSWGCVIRFFSQKGQFIEAVSL 91
W+V +Y + H+V + H+L + PD S+ V+ + + G+ + L
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 92 YVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGY--DTCVYVQTALLDLY 149
M+R GL P S+ S + RI ++ G DT VY T L+D +
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVY--TTLIDGF 361
Query: 150 SKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DV 201
K GD+ A K F EM + +V+++ +++SG+ + GD+ EA LF ++ K D
Sbjct: 362 CKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS 421
Query: 202 ISWNSMISGYSKAGNMDQA----NSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDA 257
+++ +I+GY KAG+M A N + Q N+ ++ T+I G G + SA E+
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 258 MPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSK 309
M K N + +++ G KSG+++ A KL + + D ++Y ++ Y ++ +
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 310 PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA 369
+A E+ ML + P +T +++ G LE D +L+ LA
Sbjct: 542 MDKAQEILKEMLGK--GLQPTIVTFNVLMNGFCLHGMLE----------DGEKLLNWMLA 589
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG 429
+ + +++++ + I A +++ M +G
Sbjct: 590 KGIAP---------------------NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG 628
Query: 430 PNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD-LLGRAGWLDEAYE 488
P+ TY ++ + A ++E ++ F MK G V Y +++ L R +L EA E
Sbjct: 629 PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL-EARE 687
Query: 489 LIINMPTQ 496
+ M +
Sbjct: 688 VFDQMRRE 695
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 188/390 (48%), Gaps = 26/390 (6%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
P+S+ +G +I + + EA + +M R G+ P + ++ + + D
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYL 181
++H V TA++ + ++GD+ A K+F EM E + V++ L++GY
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 182 KAGDLDEA----QHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKM----PERNLA 233
KAG + +A H+ +V+++ ++I G K G++D AN L +M + N+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 234 SWNTMIAGYIDSGSILSAREV---FDAMP-KRNSVSLITMIAGYSKSGDVDSAHKLFDQM 289
++N+++ G SG+I A ++ F+A ++V+ T++ Y KSG++D A ++ +M
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Query: 290 DEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
K L +++N ++ + + ++ +L N+ML + P+ T S++
Sbjct: 553 LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK--GIAPNATTFNSLVKQYCIRN 610
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYS 401
+L+ I + GV D LV + K+ ++ +A+ LF ++ + + YS
Sbjct: 611 NLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYS 670
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPN 431
+I GF + +A ++F+QM E + +
Sbjct: 671 VLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 180/413 (43%), Gaps = 70/413 (16%)
Query: 184 GDLDEAQHLFDKIPGKDVI----SWNSMISGYSK-AGNMDQANSLFQKMPER----NLAS 234
G L EA+ +F+K+ ++ S N ++ SK A +F++ PE N+AS
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+N +I G I A + M + + +S T++ GY + G++D KL + M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 291 EKDLLS----YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
K L Y ++I + K EA E F+ M++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ----------------------- 345
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSA 402
G++ D + T L+D + K G I A + F+ + RD+ + Y+A
Sbjct: 346 --------------GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+I GF G +A KLF +M + + P+ VT+T ++ Y AG +++ + N M G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINM---PTQPNADVWGALLLACRLHNNVE--- 516
P V Y ++D L + G LD A EL+ M QPN + +++ N+E
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 517 --LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKT 567
+GE L +DTV Y +L+ + Y G D A+++ + GK + T
Sbjct: 512 KLVGEFEAAG---LNADTVTYTTLMDA-YCKSGEMDKAQEILKEMLGKGLQPT 560
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 210/451 (46%), Gaps = 31/451 (6%)
Query: 77 RFFS---QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL 133
RFFS + QF + Q++ G+ + ++ + R S+ G+V L
Sbjct: 93 RFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL 152
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEA 189
GY+ L+ G V A + D M E +VV++NS+++G ++GD A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 190 QHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS----WNTMIAG 241
L K+ + DV +++++I + G +D A SLF++M + + S +N+++ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 242 YIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----D 293
+G + M R N ++ ++ + K G + A++L+ +M + +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 294 LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWI 353
+++YN ++ Y ++ EA + + M++ + + PD +T S+I + ++ +
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS--PDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 354 ESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF-----HGLRKRDLVAYSAMIYGFG 408
+I+ G+V + + LV + +SG I A ELF HG+ D++ Y ++ G
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP-DVMTYGILLDGLC 449
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVD 468
NG+ A+++FE + + +V YT I+ G VE+ + F S+ G+ P V
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQPNA 499
Y +M+ L + G L EA L+ M NA
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 204/455 (44%), Gaps = 61/455 (13%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ PD+ ++ +I+ +G+ EAV L +M G P +S + R D +
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGY 180
+ ++ V+ + ++D + G + A +F EM K +VV++NSL+ G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 181 LKAGDLDEAQHLFDKIPGKD----VISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
KAG ++ L + ++ VI++N ++ + K G + +AN L+++M R N+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKRNS----VSLITMIAGYSKSGDVDSAHKLFDQ 288
++NT++ GY + A + D M + V+ ++I GY VD K+F
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 289 MDEKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
+ ++ L+ +Y+ ++ + Q+ K K A ELF M+ V PD MT
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH--GVLPDVMT----------- 440
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VAY 400
+G++LD L D +G ++KA E+F L+K + V Y
Sbjct: 441 ---------------YGILLD-----GLCD----NGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ +I G G+ DA LF + + + PN++TYT +++ G + E M++
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT 495
+G P Y ++ R G L + +LI M +
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 215/459 (46%), Gaps = 32/459 (6%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
I HNL +++ I +F ++ Q A+++ +M ++G P+ ++S L
Sbjct: 106 ISHNL-----YTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNS 175
V++ Q+ +GY T L+ + A + + M K ++V++ +
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220
Query: 176 LLSGYLKAGDLDEAQHLFDKI-PGK---DVISWNSMISGYSKAGNMDQANSLFQKMPERN 231
+++G K G+ D A +L +K+ GK DV+ +N++I G K +MD A LF KM +
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 232 LA----SWNTMIAGYIDSGSILSAREVFDAMPKRNS----VSLITMIAGYSKSGDVDSAH 283
+ ++N +I+ + G A + M ++N V +I + K G + A
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 284 KLFDQMDEK-----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
KL+D+M + D+++YN +I + + + +E +E+F M + + + +T ++I
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYTTLI 398
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL- 397
Q D ++ + + + GV D L+D +G+++ A +F ++KRD+
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 398 ---VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
V Y+ MI G+ D LF + + + PN+VTYT +++ + GL EE
Sbjct: 459 LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
Query: 455 FNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
F MK++G +P Y ++ R G + ELI M
Sbjct: 519 FVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 222/481 (46%), Gaps = 37/481 (7%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-CARIQDKLGGVS 125
P + ++ ++ +F +SL QMQ +G+ + S + C R Q L ++
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLA-LA 131
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYL 181
I G++ LGY + +LL+ + + A + D+M E + V++ +L+ G
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLA 233
+ EA L +++ K D++++ ++I+G K G D A +L KM E ++
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKRNSVS-------LITMIAGYSKSGDVDSAHKLF 286
+NT+I G + A ++F+ M + LI+ + Y + D A +L
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSD---ASRLL 308
Query: 287 DQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
M EK DL+ +NA+I + + K EA +L++ M+K + + PD + ++I
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK-HCFPDVVAYNTLIKGFC 367
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLV 398
+ +E + ++ G+V + T L+ + ++ D A +F + D++
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
Y+ ++ G NG A+ +FE M ++ ++VTYT ++ A AG VE+G+ F S+
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 459 KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLACRLHNNV 515
G+ P V Y M+ R G +EA L + M PN+ + L+ A RL +
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA-RLRDGD 546
Query: 516 E 516
E
Sbjct: 547 E 547
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 201/448 (44%), Gaps = 28/448 (6%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ P + ++ F + EAV+L QM MG P + ++ + + V
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGY 180
++ ++ V G + A+++ K G+ A + ++M E +VV +N+++ G
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERN----L 232
K +D+A LF+K+ K DV ++N +IS G A+ L M E+N L
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR-----NSVSLITMIAGYSKSGDVDSAHKLFD 287
+N +I ++ G ++ A +++D M K + V+ T+I G+ K V+ ++F
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 288 QMDEKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
+M ++ L+ +Y +I + Q A +F M+ VHPD MT ++
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD--GVHPDIMTYNILLDGLCN 438
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVA 399
G++E + ++ + LD T +++ K+G ++ ++LF L K ++V
Sbjct: 439 NGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVT 498
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
Y+ M+ GF G +A LF +M + PN TY ++ A G M+
Sbjct: 499 YTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 460 DNGLVPLVDHYGIMVDLLGRAGWLDEAY 487
G +G++ ++L G LD+++
Sbjct: 559 SCGFAGDASTFGLVTNML-HDGRLDKSF 585
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 133/308 (43%), Gaps = 67/308 (21%)
Query: 46 DVNNYKPL-------------SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLY 92
DV Y PL S + +L NPD + +I F ++G+ +EA LY
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 93 VQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKM 152
+M + S H V+ Y+T L+ + K
Sbjct: 344 DEMVK---------------------------SKHCFPDVVAYNT-------LIKGFCKY 369
Query: 153 GDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISW 204
V +VF EM+++ N V++ +L+ G+ +A D D AQ +F ++ D++++
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 205 NSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMIAGYIDSGSILSAREVFDAMP- 259
N ++ G GN++ A +F+ M +R++ ++ TMI +G + ++F ++
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 260 ---KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL----SYNAMIACYAQNSKPKE 312
K N V+ TM++G+ + G + A LF +M E L +YN +I ++
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 313 ALELFNYM 320
+ EL M
Sbjct: 550 SAELIKEM 557
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 123/316 (38%), Gaps = 68/316 (21%)
Query: 253 EVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNS 308
++ + P + V +++ +K D L +QM +L +Y+ I + + S
Sbjct: 65 DMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRS 124
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
+ AL + M+K + P +TL S+++ H I
Sbjct: 125 QLSLALAILGKMMK--LGYGPSIVTLNSLLNG------FCHGNRISE------------- 163
Query: 369 ATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENI 428
A ALVD + G + D V ++ +++G + +AS+A+ L E+M+ +
Sbjct: 164 AVALVDQMVEMGY------------QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 429 GPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYE 488
P+LVTY ++ G + N M+ + V Y ++D L + +D+A++
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 489 LIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGR 548
L M T+ ++ D Y L+S + N GR
Sbjct: 272 LFNKMETK------------------------------GIKPDVFTYNPLISCL-CNYGR 300
Query: 549 WDDAKKLRMGVKGKNV 564
W DA +L + KN+
Sbjct: 301 WSDASRLLSDMLEKNI 316
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 215/489 (43%), Gaps = 75/489 (15%)
Query: 100 LC-PTSHAISSALKSCARIQ--DKLGGVSIHGQVHVLGYDTCVYVQTALLD--LYSKMGD 154
LC TS +KS +R+ DK + Q H G+ V A+LD + SK +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAH--GFMPGVLSYNAVLDATIRSKR-N 185
Query: 155 VGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNS 206
+ A VF EM E NV ++N L+ G+ AG++D A LFDK+ K +V+++N+
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 207 MISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMPKR- 261
+I GY K +D L + M E NL S+N +I G G + V M +R
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 262 ---NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL----LSYNAMIACYAQNSKPKEAL 314
+ V+ T+I GY K G+ A + +M L ++Y ++I + A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFG---------VVLD 365
E + M + P++ T +++ SQ G + + +ND G +++
Sbjct: 366 EFLDQMRVR--GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 366 DHLAT--------ALVDLYAKSGSID------------KAYELFHGLR----------KR 395
H T L D+ K S D ++Y++ LR K
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 396 DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCF 455
D + YS++I GF R +A L+E+ML + P+ TYT ++ AY G +E+
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 456 NSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM---PTQPNADVWGALLLACRLH 512
N M + G++P V Y ++++ L + EA L++ + + P+ + L+ C
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC--- 600
Query: 513 NNVELGEIA 521
+N+E +
Sbjct: 601 SNIEFKSVV 609
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/502 (21%), Positives = 221/502 (44%), Gaps = 76/502 (15%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+P+ F++ +IR F G A++L+ +M+ G P ++ + +++ G
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYL 181
+ + + G + + +++ + G + V EM + + V++N+L+ GY
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 182 KAGDLDEAQHLFDKIP----GKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA---- 233
K G+ +A + ++ VI++ S+I KAGNM++A +M R L
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNER 381
Query: 234 -----------------------------------SWNTMIAGYIDSGSILSAREVFDAM 258
++N +I G+ +G + A V + M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 259 PKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKP 310
++ + VS T+++G+ +S DVD A ++ +M EK D ++Y+++I + + +
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 311 KEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLAT 370
KEA +L+ ML+ + + PD+ T ++I+A GDLE + + + + GV+ D +
Sbjct: 502 KEACDLYEEMLR--VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 371 ALVD------------------LYAKSGSIDKAY-ELFHGLRKRDLVAYSAMIYGFGING 411
L++ Y +S D Y L + + ++I GF + G
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKG 619
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYG 471
++A ++FE MLG+N P+ Y ++ + AG + + Y + M +G +
Sbjct: 620 MMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVI 679
Query: 472 IMVDLLGRAGWLDEAYELIINM 493
+V L + G ++E +I+++
Sbjct: 680 ALVKALHKEGKVNELNSVIVHV 701
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 228/476 (47%), Gaps = 36/476 (7%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS---CARIQDKLGGV 124
D +++ I F ++ Q A+++ +M ++G P +SS L RI D V
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD---AV 173
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGY 180
++ Q+ +GY + T L+ A + D+M ++ ++V++ ++++G
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 181 LKAGDLDEAQHLFDKI-PGK---DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
K GD+D A L K+ GK DV+ +N++I G K +MD A +LF +M + ++
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
+++++I+ + G A + M +R N V+ +I + K G + A KL+D+
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 289 MDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M ++ D+ +Y+++I + + + EA +F M+ + P+ +T +++I +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYSTLIKGFCKA 411
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK----RDLVAY 400
+E + ++ G+V + T L+ + ++ D A +F + +++ Y
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ ++ G NG+ + A+ +FE + + P++ TY ++ AG VE+G+ F ++
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLACRLHN 513
G+ P V Y M+ R G +EA L+ M PN+ + L+ A RL +
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA-RLRD 586
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 208/453 (45%), Gaps = 26/453 (5%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ PD + ++ + + +AV+L QM MG P + ++ + V
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGY 180
++ Q+ G + +++ K GD+ A + +M E +VV +N+++ G
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
K +D+A +LF ++ K DV +++S+IS G A+ L M ER N+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
+++ +I ++ G ++ A +++D M KR + + ++I G+ +D A +F+
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 289 MDEKD----LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M KD +++Y+ +I + + + +E +ELF M + + + +T ++I Q
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYTTLIHGFFQA 446
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAY 400
D ++ + + + GV + L+D K+G + KA +F L++ D+ Y
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 506
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ MI G G+ D +LF + + + PN++ Y +++ + G EE MK+
Sbjct: 507 NIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
+G +P Y ++ R G + + ELI M
Sbjct: 567 DGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/446 (21%), Positives = 202/446 (45%), Gaps = 62/446 (13%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
PD ++G V+ ++G A+SL +M++ + ++ + + + ++
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYL 181
+ ++ G V+ ++L+ G A ++ +M E+ NVV++++L+ ++
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLA 233
K G L EA+ L+D++ + D+ +++S+I+G+ +D+A +F+ M + N+
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+++T+I G+ + + E+F M +R N+V+ T+I G+ ++ D D+A +F QM
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 290 DE----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
++L+YN ++ +N K +A+ +F Y+ + + PD T +I
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS--TMEPDIYTYNIMIEG----- 512
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYS 401
K+G ++ +ELF L + +++AY+
Sbjct: 513 ------------------------------MCKAGKVEDGWELFCNLSLKGVSPNVIAYN 542
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN 461
MI GF G +A L ++M + PN TY ++ A G E M+
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAY 487
G G++ ++L G LD+++
Sbjct: 603 GFAGDASTIGLVTNML-HDGRLDKSF 627
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 136/289 (47%), Gaps = 24/289 (8%)
Query: 54 SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
S + ++ NP+ ++ +I F ++G+ +EA LY +M + + P SS +
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 372
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTC--VYVQTALLDLYSKMGDVGTARKVFDEMAEK--- 168
+ D+L H ++ D V + L+ + K V ++F EM+++
Sbjct: 373 FC-MHDRLDEAK-HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 169 -NVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSL 223
N V++ +L+ G+ +A D D AQ +F ++ +++++N ++ G K G + +A +
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 224 FQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSK 275
F+ + E ++ ++N MI G +G + E+F + + N ++ TMI+G+ +
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 276 SGDVDSAHKLFDQMDEKDLL----SYNAMIACYAQNSKPKEALELFNYM 320
G + A L +M E L +YN +I ++ + + EL M
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 66/264 (25%)
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISA-CSQLGDLEHWR 351
DL +Y+ I C+ + S+ AL + M+K + PD +TL+S+++ C H +
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMK--LGYEPDIVTLSSLLNGYC-------HSK 167
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGING 411
I A ALVD + G K D ++ +I+G ++
Sbjct: 168 RISD-------------AVALVDQMVEMG------------YKPDTFTFTTLIHGLFLHN 202
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYG 471
+AS+A+ L +QM+ P+LVTY ++ G ++ M+ + V Y
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 472 IMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESD 531
++D L + +D+A L M + + D
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNK------------------------------GIRPD 292
Query: 532 TVGYYSLLSSIYANLGRWDDAKKL 555
Y SL+S + N GRW DA +L
Sbjct: 293 VFTYSSLISCL-CNYGRWSDASRL 315
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 131/560 (23%), Positives = 239/560 (42%), Gaps = 90/560 (16%)
Query: 34 LEPLFIHHILLWDVNNYKPLS---HYVHPILHNLHNPDSF-----SWGCVIRFFSQKGQF 85
L L +HH++ D+ N+ PLS + + + F ++ + RF + F
Sbjct: 77 LPSLSVHHVV--DLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEMF 134
Query: 86 IEAVSL----------------YVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
EA SL ++ + M + P + AL LG + Q
Sbjct: 135 TEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMI---TYTDLGFIPDAIQ 191
Query: 130 VHVLG----YDTCVYVQTALLDLYSKMGDVGTA----RKVFDEMAEKNVVSWNSLLSGYL 181
L +D + LLD K+ GT ++ D NV +N L++ +
Sbjct: 192 CFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFC 251
Query: 182 KAGDLDEAQHLFDKIPGKD----VISWNSMISGYSKAGNMDQANSLFQKMPER----NLA 233
K G++ +AQ +FD+I + V+S+N++I+GY K GN+D+ L +M + ++
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVD----SAHKL 285
+++ +I + A +FD M KR N V T+I G+S++G++D S K+
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 286 FDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
+ + D++ YN ++ + +N A + + M++ + PDK+T ++I + G
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR--GLRPDKITYTTLIDGFCRGG 429
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIY 405
D+E I ++ G+ L D V +SA++
Sbjct: 430 DVETALEIRKEMDQNGIEL-------------------------------DRVGFSALVC 458
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
G GR DA + +ML I P+ VTYT ++ A+ G + G+ M+ +G VP
Sbjct: 459 GMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Query: 466 LVDHYGIMVDLLGRAGWLDEAYELI---INMPTQPNADVWGALLLACRLHNNVELGEIAV 522
V Y ++++ L + G + A L+ +N+ P+ + LL H N I
Sbjct: 519 SVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQK 578
Query: 523 QHCIKLESDTVGYYSLLSSI 542
I + +D Y S+++ +
Sbjct: 579 PE-IGIVADLASYKSIVNEL 597
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 207/441 (46%), Gaps = 33/441 (7%)
Query: 81 QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHV-LGYDTCV 139
+KG+ A+ +Y QM + P S + + R + + + LG + V
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 140 YVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDK 195
+L++ Y+ +GDV +V M+E+ NVV++ SL+ GY K G ++EA+H+F+
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 196 IPGKDVIS----WNSMISGYSKAGNMDQANSLFQKMPE----RNLASWNTMIAGYIDSGS 247
+ K +++ + ++ GY + G + A + M E N N++I GY SG
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 248 ILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKD----LLSYNA 299
++ A ++F M K + + T++ GY ++G VD A KL DQM +K+ +++YN
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIND 359
++ Y++ + L L+ MLK +N D+++ ++++ A +LGD + ++
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNA--DEISCSTLLEALFKLGDFNEAMKLWENVLA 499
Query: 360 FGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIYGFGINGRASD 415
G++ D ++ K +++A E+ + K + Y A+ +G+ G +
Sbjct: 500 RGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTA---YNHAGLVEEGYWCFNSMKDNGLVPLVDHYGI 472
A + E M + I P + Y +++ Y H V + ++ GL P V YG
Sbjct: 560 AFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD---LVIELRARGLTPTVATYGA 616
Query: 473 MVDLLGRAGWLDEAYELIINM 493
++ G +D+AY M
Sbjct: 617 LITGWCNIGMIDKAYATCFEM 637
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/535 (19%), Positives = 218/535 (40%), Gaps = 99/535 (18%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQV 130
++ +I+ + +KG EA ++ ++ L H + R V +H +
Sbjct: 298 TYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNM 357
Query: 131 HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNSLLSGYLKAGDL 186
+G T + +L++ Y K G + A ++F M + ++ ++N+L+ GY +AG +
Sbjct: 358 IEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYV 417
Query: 187 DEAQHLFDKIPGKDVI----SWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTM 238
DEA L D++ K+V+ ++N ++ GYS+ G SL++ M +R + S +T+
Sbjct: 418 DEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTL 477
Query: 239 IAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD---- 290
+ G A ++++ + R ++++L MI+G K V+ A ++ D ++
Sbjct: 478 LEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC 537
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLK----PEINVH------------------ 328
+ + +Y A+ Y + KEA + YM + P I ++
Sbjct: 538 KPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVAD 597
Query: 329 -----------PDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
P T ++I+ +G ++ + + G+ L+ ++ + + +
Sbjct: 598 LVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLF 657
Query: 378 KSGSIDKAYELFHGLRKRDL---------------------------------------- 397
+ ID+A L + DL
Sbjct: 658 RLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVP 717
Query: 398 --VAYSAMIYGFGINGRASDAIKLFEQMLG-ENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
+ Y+ I G G+ DA KLF +L + P+ TYT ++ AG + + +
Sbjct: 718 NNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTL 777
Query: 455 FNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALL 506
+ M G++P + Y ++ L + G +D A L+ +P + PNA + L+
Sbjct: 778 RDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLI 832
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 197/453 (43%), Gaps = 34/453 (7%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD ++ ++ + + G EA+ L QM + + PT + LK +RI +S+
Sbjct: 399 PDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSL 458
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLK 182
+ G + + LL+ K+GD A K+++ + + + ++ N ++SG K
Sbjct: 459 WKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 183 AGDLDEAQHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
++EA+ + D + P V ++ ++ GY K GN+ +A ++ + M + +
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPA--VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTI 576
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLIT----MIAGYSKSGDVDSAHKLFDQ 288
+NT+I+G + ++ + R + +I G+ G +D A+ +
Sbjct: 577 EMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFE 636
Query: 289 MDEKDLLSYNAMIACYAQNS-----KPKEALELFNYMLKPEINVHPDKMTLASVI--SAC 341
M EK + + N I NS K EA L ++ ++ + P +L + SA
Sbjct: 637 MIEKGI-TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDL-LLPGYQSLKEFLEASAT 694
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV--- 398
+ L + +E+ +V ++ + + K+G ++ A +LF L D
Sbjct: 695 TCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPD 754
Query: 399 --AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
Y+ +I+G I G + A L ++M + I PN+VTY ++ G V+ +
Sbjct: 755 EYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLH 814
Query: 457 SMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYEL 489
+ G+ P Y ++D L ++G + EA L
Sbjct: 815 KLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 192/444 (43%), Gaps = 52/444 (11%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P ++ +++ +S+ G F + +SL+ M + G+ + S+ L++ ++ D + +
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL 493
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYLK 182
V G T ++ KM V A+++ D + + V ++ +L GY K
Sbjct: 494 WENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYK 553
Query: 183 AGDLDEAQHLFDKIPGKDVIS----WNSMISGYSKAGNMDQANSLFQKMPERNL----AS 234
G+L EA + + + K + +N++ISG K ++++ L ++ R L A+
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRN---SVSLITMIA-GYSKSGDVDSAHKLFDQMD 290
+ +I G+ + G I A M ++ +V++ + IA + +D A L ++
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Query: 291 EKDLL--SYNAM----------------IACYAQNSKPKEALELFNYMLKPEINVHPDKM 332
+ DLL Y ++ IA +NS PK+ L P+ +
Sbjct: 674 DFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLV-------------PNNI 720
Query: 333 TLASVISACSQLGDLEHWRWIESHI-NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
I+ + G LE R + S + + + D++ T L+ A +G I+KA+ L
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 392 LRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGL 447
+ + ++V Y+A+I G G A +L ++ + I PN +TY ++ +G
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 448 VEEGYWCFNSMKDNGLVPLVDHYG 471
V E M + GLV D G
Sbjct: 841 VAEAMRLKEKMIEKGLVRGSDKQG 864
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 142/333 (42%), Gaps = 44/333 (13%)
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYS----KSGDVDSAHKLFDQMD 290
++ ++ Y + G + +A VFD M + + + G+ A ++DQM
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 291 E----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
D+ + + ++ Y ++ +A+ +F + + + + +T S+I+ + +GD
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAM-VFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSA 402
+E + +++ GV + T+L+ Y K G +++A +F L+++ LVA Y
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
++ G+ G+ DA+++ + M+ + N ++ Y +G + E F+ M D
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAV 522
L P Y +VD RAG++DEA +L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKL-------------------------------CD 425
Query: 523 QHCIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
Q C K TV Y++L Y+ +G + D L
Sbjct: 426 QMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSL 458
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 352 WIESHIND----FGVVLDDHLATALVDLYAKSGSIDKAY------ELFHGLRKRDLVAYS 401
++ H+ D F V D + +V+ Y +SG++DKA E GL + ++V Y+
Sbjct: 207 FVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGL-ELNVVTYN 265
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN 461
++I G+ + G ++ M + N+VTYT ++ Y GL+EE F +K+
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAYEL---IINMPTQPNADVWGALLLA-CRLHNNVEL 517
LV YG+++D R G + +A + +I + + N + +L+ C+ VE
Sbjct: 326 KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 518 GEI-AVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIKT 567
+I + + L+ D Y +L+ Y G D+A KL + K V+ T
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDG-YCRAGYVDEALKLCDQMCQKEVVPT 435
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 224/473 (47%), Gaps = 32/473 (6%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLG-GVS 125
P + ++ ++ +F +SL QMQ +G+ P +H S L +C + +L ++
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI-PHNHYTYSILINCFCRRSQLPLALA 137
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYL 181
+ G++ LGY+ + ++LL+ Y + A + D+M + N V++N+L+ G
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF 197
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS--- 234
EA L D++ K D++++ +++G K G+ D A +L KM + L
Sbjct: 198 LHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL 257
Query: 235 -WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+NT+I G + A +F M + N V+ ++I+ G A +L M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 290 DEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
E+ D+ +++A+I + + K EA +L++ M+K I+ P +T +S+I+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID--PSIVTYSSLINGFCMHD 375
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VAYS 401
L+ + + + D L+ + K +++ E+F + +R L V Y+
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN 461
+I G G A ++F++M+ + + PN++TY +L G +E+ F ++ +
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLA-CR 510
+ P + Y IM++ + +AG +++ ++L N+ +P+ + ++ CR
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 225/483 (46%), Gaps = 35/483 (7%)
Query: 61 LHNLHNP-DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+ NL P + +++ +I F ++ Q A+++ +M ++G P +SS L +
Sbjct: 107 MQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR 166
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNS 175
V++ Q+ V GY L+ A + D M K ++V++
Sbjct: 167 ISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGV 226
Query: 176 LLSGYLKAGDLDEAQHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQKMPE 229
+++G K GD D A +L +K+ PG V+ +N++I G K +MD A +LF++M
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPG--VLIYNTIIDGLCKYKHMDDALNLFKEMET 284
Query: 230 R----NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDS 281
+ N+ +++++I+ + G A + M +R + + +I + K G +
Sbjct: 285 KGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVE 344
Query: 282 AHKLFDQMDEKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
A KL+D+M ++ + ++Y+++I + + + EA ++F +M+ + PD +T ++
Sbjct: 345 AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK--HCFPDVVTYNTL 402
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR-- 395
I + +E + ++ G+V + L+ ++G D A E+F +
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 396 --DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
+++ Y+ ++ G NG+ A+ +FE + + P + TY ++ AG VE+G+
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 454 CFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLACR 510
F ++ G+ P V Y M+ R G +EA L M T PN+ + L+ A R
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA-R 581
Query: 511 LHN 513
L +
Sbjct: 582 LRD 584
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 196/439 (44%), Gaps = 48/439 (10%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+AV+L+ +M + P+ S L + A++ +S+ Q+ LG Y + L+
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 147 DLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVI 202
+ + + + A V +M E N+V+ +SLL+GY + + EA L D++
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM------ 177
Query: 203 SWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRN 262
++GY + N ++NT+I G A + D M +
Sbjct: 178 ----FVTGY-----------------QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 263 S----VSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEAL 314
V+ ++ G K GD D A L ++M+ E +L YN +I + +AL
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVD 374
LF M + P+ +T +S+IS G + S + + + D +AL+D
Sbjct: 277 NLFKEM--ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 375 LYAKSGSIDKAYELFHGLRKRDL----VAYSAMIYGFGINGRASDAIKLFEQMLGENIGP 430
+ K G + +A +L+ + KR + V YS++I GF ++ R +A ++FE M+ ++ P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 431 NLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI 490
++VTY ++ + VEEG F M GLV Y I++ L +AG D A E+
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 491 INMPTQ---PNADVWGALL 506
M + PN + LL
Sbjct: 455 KEMVSDGVPPNIMTYNTLL 473
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 202/445 (45%), Gaps = 62/445 (13%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD ++G V+ ++G A +L +M++ L P ++ + + + +++
Sbjct: 219 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLK 182
++ G V ++L+ G A ++ +M E+ +V ++++L+ ++K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 183 AGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPER----NLAS 234
G L EA+ L+D++ + + ++++S+I+G+ +D+A +F+ M + ++ +
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+NT+I G+ + EVF M +R N+V+ +I G ++GD D A ++F +M
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 291 E----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
++++YN ++ +N K ++A+ +F Y+ + ++
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM--------------------- 497
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSA 402
E I + ++++ K+G ++ ++LF L K D+VAY+
Sbjct: 498 -------EPTIYTYNIMIEG---------MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
MI GF G +A LF++M + PN Y ++ A G E M+ G
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Query: 463 LVPLVDHYGIMVDLLGRAGWLDEAY 487
G++ ++L G LD+++
Sbjct: 602 FAGDASTIGLVTNML-HDGRLDKSF 625
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 142/296 (47%), Gaps = 38/296 (12%)
Query: 54 SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
S + ++ NPD F++ +I F ++G+ +EA LY +M + + P+ SS +
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 114 CARIQDKLGG--------VSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM 165
+ D+L VS H V+ Y+T L+ + K V +VF EM
Sbjct: 371 FC-MHDRLDEAKQMFEFMVSKHCFPDVVTYNT-------LIKGFCKYKRVEEGMEVFREM 422
Query: 166 AEK----NVVSWNSLLSGYLKAGDLDEAQHLF-----DKIPGKDVISWNSMISGYSKAGN 216
+++ N V++N L+ G +AGD D AQ +F D +P +++++N+++ G K G
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP-PNIMTYNTLLDGLCKNGK 481
Query: 217 MDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLIT 268
+++A +F+ + E + ++N MI G +G + ++F + K + V+ T
Sbjct: 482 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEKDLL----SYNAMIACYAQNSKPKEALELFNYM 320
MI+G+ + G + A LF +M E L YN +I ++ + + EL M
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 171/343 (49%), Gaps = 29/343 (8%)
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAG-DLDE 188
GY VY +AL+ Y + G A VF+ M E N+V++N+++ K G + +
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 189 AQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIA 240
FD++ D I++NS+++ S+ G + A +LF +M R + S+NT++
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 241 GYIDSGSILSAREVFDAMP-KR---NSVSLITMIAGYSKSGDVDSAHKLFDQMD----EK 292
G + A E+ MP KR N VS T+I G++K+G D A LF +M
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
D +SYN +++ Y + + +EAL++ M + + D +T +++ + G + +
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREM--ASVGIKKDVVTYNALLGGYGKQGKYDEVKK 500
Query: 353 IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFH-----GLRKRDLVAYSAMIYGF 407
+ + + V+ + + L+D Y+K G +A E+F GLR D+V YSA+I
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA-DVVLYSALIDAL 559
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEE 450
NG A+ L ++M E I PN+VTY I+ A+ + ++
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDR 602
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 190/407 (46%), Gaps = 40/407 (9%)
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN-------SLLSGYLKAGDL 186
G D C Y+ L + VG F E A K N +++S + G +
Sbjct: 195 GSDDCTYIIRELGNRNECDKAVG-----FYEFAVKRERRKNEQGKLASAMISTLGRYGKV 249
Query: 187 DEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPE----RNLASWNTM 238
A+ +F+ G V +++++IS Y ++G ++A S+F M E NL ++N +
Sbjct: 250 TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAV 309
Query: 239 IAGYIDSG-SILSAREVFDAMPKRNSV-----SLITMIAGYSKSGDVDSAHKLFDQMD-- 290
I G + FD M +RN V + +++A S+ G ++A LFD+M
Sbjct: 310 IDACGKGGMEFKQVAKFFDEM-QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 291 --EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
E+D+ SYN ++ + + A E+ M P + P+ ++ ++VI ++ G +
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQM--PVKRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMI 404
+ + G+ LD L+ +Y K G ++A ++ + K+D+V Y+A++
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL 486
Query: 405 YGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV 464
G+G G+ + K+F +M E++ PNL+TY+ ++ Y+ GL +E F K GL
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 465 PLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLA 508
V Y ++D L + G + A LI M + PN + +++ A
Sbjct: 547 ADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 210/456 (46%), Gaps = 56/456 (12%)
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS-IHG 128
+++ +I + + G EA+S++ M+ GL P ++ + +C + + V+
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFD 328
Query: 129 QVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAG 184
++ G +LL + S+ G AR +FDEM E++V S+N+LL K G
Sbjct: 329 EMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 185 DLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWN 236
+D A + ++P K +V+S++++I G++KAG D+A +LF +M +A S+N
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYN 448
Query: 237 TMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK 292
T+++ Y G A ++ M K++ V+ ++ GY K G D K+F +M +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 293 ----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
+LL+Y+ +I Y++ KEA+E+F + D + +++I A + G +
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF--KSAGLRADVVLYSALIDALCKNGLVG 566
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG---------LRKRDLVA 399
+ + G+ + +++D + +S ++D++ + +G L
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETE 626
Query: 400 YSAMIYGFG-----INGRASD-----------AIKLFEQMLGENIGPNLVTYTGILTAYN 443
+ +I FG N R + +++F +M I PN+VT++ IL A +
Sbjct: 627 GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
Query: 444 HAGLVEEGYWCFNSMK--DNGLVPLVDHYGIMVDLL 477
E+ ++ DN + YG++ LL
Sbjct: 687 RCNSFEDASMLLEELRLFDNKV------YGVVHGLL 716
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 143/322 (44%), Gaps = 43/322 (13%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D FS+ ++ + GQ A + QM + P + S+ + A+ +++
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKA 183
G++ LG LL +Y+K+G A + EMA +K+VV++N+LL GY K
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492
Query: 184 GDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPERNLAS----W 235
G DE + +F ++ + V ++++++I GYSK G +A +F++ L + +
Sbjct: 493 GKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLY 552
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVD----------- 280
+ +I +G + SA + D M K N V+ ++I + +S +D
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSL 612
Query: 281 ----SAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEA----------LELFNYMLKPEIN 326
SA + + ++ + + N K+ LE+F M + EI
Sbjct: 613 PFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIK 672
Query: 327 VHPDKMTLASVISACSQLGDLE 348
P+ +T +++++ACS+ E
Sbjct: 673 --PNVVTFSAILNACSRCNSFE 692
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 132/294 (44%), Gaps = 23/294 (7%)
Query: 276 SGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDK 331
SGD + H L + K D +Y +I ++ +A+ + + +K E +
Sbjct: 176 SGDDEMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQG 233
Query: 332 MTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
+++IS + G + + I G + +AL+ Y +SG ++A +F+
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 392 LR----KRDLVAYSAMIYGFGINGRASDAI-KLFEQMLGENIGPNLVTYTGILTAYNHAG 446
++ + +LV Y+A+I G G + K F++M + P+ +T+ +L + G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 447 LVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PN----A 499
L E F+ M + + V Y ++D + + G +D A+E++ MP + PN +
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 500 DVWGALLLACRLHNNVEL-GEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDA 552
V A R + L GE+ + + D V Y +LLS IY +GR ++A
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEM---RYLGIALDRVSYNTLLS-IYTKVGRSEEA 463
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 368 LATALVDLYAKSGSIDKAYELFH----GLRKRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
LA+A++ + G + A +F G + A+SA+I +G +G +AI +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 424 LGENIGPNLVTYTGILTAYNHAGL-VEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGW 482
+ PNLVTY ++ A G+ ++ F+ M+ NG+ P + ++ + R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 483 LDEAYEL---IINMPTQPNADVWGALLLACRLHNNVELG-EIAVQHCIKLESDTVGYYSL 538
+ A L + N + + + LL A ++L EI Q +K V YS
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 539 LSSIYANLGRWDDAKKL 555
+ +A GR+D+A L
Sbjct: 415 VIDGFAKAGRFDEALNL 431
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 226/479 (47%), Gaps = 40/479 (8%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-C--AR 116
I HNL +++ +I F ++ Q A++L +M ++G P+ +SS L C R
Sbjct: 41 ISHNL-----YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTAL---LDLYSKMGD-VGTARKVFDEMAEKNVVS 172
I D V++ Q+ +GY T L L L++K + V ++ + N+V+
Sbjct: 96 ISD---AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 152
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP 228
+ +++G K GD+D A +L +K+ DV+ +N++I K ++D A +LF++M
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 229 ER----NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVD 280
+ N+ +++++I+ G A ++ M ++ N V+ +I + K G
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 272
Query: 281 SAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
A KL D M ++ D+ +YN++I + + + +A ++F +M+ + PD T +
Sbjct: 273 EAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD--CFPDLDTYNT 330
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR- 395
+I + +E + ++ G+V D T L+ G D A ++F +
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 396 ---DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
D++ YS ++ G NG+ A+++F+ M I ++ YT ++ AG V++G+
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 453 WCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLA 508
F S+ G+ P V Y M+ L L EAY L+ M P++ + L+ A
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 222/468 (47%), Gaps = 31/468 (6%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-CARIQDKLGGVS 125
P F + ++ ++ +F +SL +MQR+G+ + + + C R Q L ++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA-LA 66
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYL 181
+ G++ LGY+ + ++LL+ Y + A + D+M E + +++ +L+ G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLA 233
EA L D++ + +++++ +++G K G++D A +L KM E ++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+NT+I + A +F M + N V+ ++I+ G A +L M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 290 DEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
EK +L+++NA+I + + K EA +L + M+K I+ PD T S+I+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID--PDIFTYNSLINGFCMHD 304
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYS 401
L+ + + + D L+ + KS ++ ELF + R D V Y+
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDN 461
+I G +G +A K+F+QM+ + + P+++TY+ +L + G +E+ F+ M+ +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 462 GLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALL 506
+ + Y M++ + +AG +D+ ++L ++ +PN + ++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 51/310 (16%)
Query: 54 SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
S + ++ NP+ ++ +I F ++G+F+EA L+ M + + P +S
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL--- 296
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSW 173
+ G +H + LD +M + ++ F ++ ++
Sbjct: 297 -------INGFCMHDR----------------LDKAKQMFEFMVSKDCFPDLD-----TY 328
Query: 174 NSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE 229
N+L+ G+ K+ +++ LF ++ + D +++ ++I G G+ D A +F++M
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 388
Query: 230 R----NLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSL-----ITMIAGYSKSGDVD 280
++ +++ ++ G ++G + A EVFD M K + + L TMI G K+G VD
Sbjct: 389 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK-SEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 281 SAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
LF + K ++++YN MI+ +EA L M E PD T +
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM--KEDGPLPDSGTYNT 505
Query: 337 VISACSQLGD 346
+I A + GD
Sbjct: 506 LIRAHLRDGD 515
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 216/472 (45%), Gaps = 42/472 (8%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD--KLGGV 124
P + V++ +A ++Y M G+ PT ++ L SC + D ++ +
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNSLLSGY 180
+ + + + Y L++ +SK G + AR+ +M S+N L+ GY
Sbjct: 261 WLEMKRRNIEFSEVTY--NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGY 318
Query: 181 LKAGDLDEAQHLFDKIPGKDVI----SWNSMISGYSKAGNMDQANSLFQKMPERNLASWN 236
K G D+A + D++ + ++N I G +D A L M ++ S+N
Sbjct: 319 CKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYN 378
Query: 237 TMIAGYIDSGSILSAREVFDAMPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK 292
T++ GYI G + A +FD + + V+ T+I G +SG+++ A +L ++M +
Sbjct: 379 TLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ 438
Query: 293 ----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLE 348
D+++Y ++ + +N A E+++ ML+ + PD + +LGD +
Sbjct: 439 LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRK--GIKPDGYAYTTRAVGELRLGDSD 496
Query: 349 H-WRWIESHINDFGVVLDDHLATAL------VDLYAKSGSIDKAYELFHGLRK----RDL 397
+R E +V DH A L +D K G++ KA E + + D
Sbjct: 497 KAFRLHEE------MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
V Y+ +I G+ NG+ A L+++ML + + P+++TY ++ + AG +E+ +
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALL 506
MK G+ P V + ++ + +AG +DEAY + M + PN + L+
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 200/431 (46%), Gaps = 53/431 (12%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCAR---------IQDKL 121
++ +I FS+ G+ EA + M+R G T ++ + ++ + + D++
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYL 181
I+ C AL D G + AR++ MA +VVS+N+L+ GY+
Sbjct: 335 LNAGIYPTTSTYNIYIC-----ALCDF----GRIDDARELLSSMAAPDVVSYNTLMHGYI 385
Query: 182 KAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPER----NLA 233
K G EA LFD + D+ +++N++I G ++GN++ A L ++M + ++
Sbjct: 386 KMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVI 445
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
++ T++ G++ +G++ A EV+D M ++ + + T G + GD D A +L ++M
Sbjct: 446 TYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM 505
Query: 290 -----DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
DL YN I + +A+E + + + + PD +T +VI +
Sbjct: 506 VATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR--VGLVPDHVTYTTVIRGYLEN 563
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLY------AKSGSIDKAYELFHGLRKR--- 395
G + R N + +L L +++ + AK+G +++A++ ++KR
Sbjct: 564 GQFKMAR------NLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 396 -DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
+++ ++A++YG G +A + +M E I PN +YT +++ EE
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKL 677
Query: 455 FNSMKDNGLVP 465
+ M D + P
Sbjct: 678 YKEMLDKEIEP 688
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 34/319 (10%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+L ++ PD S+ ++ + + G+F+EA L+ ++ + P+ ++ + +
Sbjct: 365 LLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNS 175
G + ++ V T L+ + K G++ A +V+DEM K + ++ +
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGK-----DVISWNSMISGYSKAGNMDQANSLFQKMPER 230
G L+ GD D+A L +++ D+ +N I G K GN+ +A +K+
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 231 NL----ASWNTMIAGYIDSGSILSAREVFDAM-PKRNSVSLIT---MIAGYSKSGDVDSA 282
L ++ T+I GY+++G AR ++D M KR S+IT +I G++K+G ++ A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 283 HKLFDQMDEK----DLLSYNAMI--ACYAQNSKPKEALELFNYMLK-PEINVHPDKMTLA 335
+ +M ++ +++++NA++ C A N E + Y+ K E + P+K +
Sbjct: 605 FQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID-----EAYRYLCKMEEEGIPPNKYSYT 659
Query: 336 SVISA-CSQLGDLEHWRWI 353
+IS C D E W +
Sbjct: 660 MLISKNC----DFEKWEEV 674
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 209/453 (46%), Gaps = 26/453 (5%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ P + ++ F + EAV+L QM MG P + ++ + + V
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGY 180
++ ++ V G + A+++ K G+ A + ++M E +VV +++++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
K +D+A +LF ++ K DV +++S+IS G A+ L M ER N+
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
++N++I + G ++ A ++FD M +R N V+ ++I G+ +D A ++F
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTL 370
Query: 289 MDEKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M KD L +YN +I + + K + +ELF M + + + +T ++I Q
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR--GLVGNTVTYTTLIHGFFQA 428
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAY 400
D ++ + + + GV + L+D K+G ++KA +F L+K D+ Y
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTY 488
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ M G G+ D LF + + + P+++ Y +++ + GL EE Y F MK+
Sbjct: 489 NIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
+G +P Y ++ R G + ELI M
Sbjct: 549 DGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/474 (22%), Positives = 225/474 (47%), Gaps = 34/474 (7%)
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
HNL +++ +I ++ Q A+++ +M ++G P+ ++S L
Sbjct: 98 HNL-----YTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLL 177
V++ Q+ +GY T L+ + A + + M K ++V++ +++
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 178 SGYLKAGDLDEAQHLFDKI-PGK---DVISWNSMISGYSKAGNMDQANSLFQKMPER--- 230
+G K G+ D A +L +K+ GK DV+ ++++I K ++D A +LF +M +
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKL 285
++ +++++I+ + G A + M +R N V+ ++I ++K G + A KL
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 286 FDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
FD+M ++ ++++YN++I + + + EA ++F M+ + PD +T ++I+
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD--CLPDVVTYNTLINGF 390
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DL 397
+ + + ++ G+V + T L+ + ++ D A +F + ++
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
+ Y+ ++ G NG+ A+ +FE + + P++ TY + AG VE+G+ F S
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLA 508
+ G+ P V Y M+ + G +EAY L I M P++ + L+ A
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/470 (20%), Positives = 217/470 (46%), Gaps = 35/470 (7%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P + ++ ++ +F +S +M+ +G+ + + + R ++I
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLK 182
G++ LGY + +LL+ + + A + D+M E + V++ +L+ G +
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 183 AGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLAS 234
EA L +++ K D++++ ++I+G K G D A +L KM E ++
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR-------NSVSLITMIAGYSKSGDVDSAHKLFD 287
++T+I + A +F M + SLI+ + Y + D A +L
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD---ASRLLS 299
Query: 288 QMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQ 343
M E+ +++++N++I +A+ K EA +LF+ M++ I+ P+ +T S+I+
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID--PNIVTYNSLINGFCM 357
Query: 344 LGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VA 399
L+ + I + + + D L++ + K+ + ELF + +R L V
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 400 YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
Y+ +I+GF +A +F+QM+ + + PN++TY +L G +E+ F ++
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 460 DNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALL 506
+ + P + Y IM + + +AG +++ ++L ++ +P+ + ++
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 140/291 (48%), Gaps = 28/291 (9%)
Query: 54 SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
S + +L NP+ ++ +I F+++G+ IEA L+ +M + + P +S +
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 114 CARIQDKLGGVSIHGQVHVLGYDT-C---VYVQTALLDLYSKMGDVGTARKVFDEMAEK- 168
+ D+L Q+ L C V L++ + K V ++F +M+ +
Sbjct: 355 FC-MHDRLDEAQ---QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 169 ---NVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQAN 221
N V++ +L+ G+ +A D D AQ +F ++ +++++N+++ G K G +++A
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 222 SLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGY 273
+F+ + E ++ ++N M G +G + ++F ++ K + ++ TMI+G+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 274 SKSGDVDSAHKLFDQMDEKDLL----SYNAMIACYAQNSKPKEALELFNYM 320
K G + A+ LF +M E L +YN +I + ++ + EL M
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 117/307 (38%), Gaps = 68/307 (22%)
Query: 253 EVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNS 308
E+ + P + V +++ +K D ++M+ +L +YN MI C + S
Sbjct: 55 EMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRS 114
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
+ AL + M+K + P +TL S+++ H I
Sbjct: 115 QLSFALAILGKMMK--LGYGPSIVTLNSLLNG------FCHGNRISE------------- 153
Query: 369 ATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENI 428
A ALVD + G + D V ++ +++G + +AS+A+ L E+M+ +
Sbjct: 154 AVALVDQMVEMG------------YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 201
Query: 429 GPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYE 488
P+LVTY ++ G + N M+ + V Y ++D L + +D+A
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 489 LIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGR 548
L M + + D Y SL+S + N GR
Sbjct: 262 LFTEMDNK------------------------------GIRPDVFTYSSLISCL-CNYGR 290
Query: 549 WDDAKKL 555
W DA +L
Sbjct: 291 WSDASRL 297
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 216/470 (45%), Gaps = 44/470 (9%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
++H+ P + + ++ Q+ ++L QM+ G+ + +S + R +
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNS 175
S G++ LGY+ + L++ G V A ++ D M E ++++ N+
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 176 LLSGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERN 231
L++G +G EA L DK+ + +++ +++ K+G A L +KM ERN
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 232 L----ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAH 283
+ ++ +I G GS+ +A +F+ M + N ++ +I G+ +G D
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGA 318
Query: 284 KLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVIS 339
KL M ++ ++++++ +I + + K +EA EL M+ + PD +T S+I
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR--GIAPDTITYTSLID 376
Query: 340 A---------CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFH 390
+Q+ DL + + +I F + L++ Y K+ ID ELF
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNI---------LINGYCKANRIDDGLELFR 427
Query: 391 GLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG 446
+ R D V Y+ +I GF G+ + A +LF++M+ + PN+VTY +L G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 447 LVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ 496
E+ F ++ + + + Y I++ + A +D+A++L ++P +
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 206/463 (44%), Gaps = 62/463 (13%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ P++ ++ +I +G+ EA+ L +M MG P I++ + + +
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNSLLSGY 180
+ ++ G +L++ K G A ++ +M E+N+ V ++ ++ G
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
K G LD A +LF+++ K ++I++N +I G+ AG D L + M +R N+
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
+++ +I ++ G + A E+ M R ++++ ++I G+ K +D A+++ D
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 289 MDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M K ++ ++N +I Y + ++ + LELF KM+L
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFR------------KMSLR--------- 432
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAY 400
GVV D L+ + + G ++ A ELF + R ++V Y
Sbjct: 433 ----------------GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
++ G NG + A+++FE++ + ++ Y I+ +A V++ + F S+
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNA-DVW 502
G+ P V Y IM+ L + G L EA L M +A D W
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 139/347 (40%), Gaps = 72/347 (20%)
Query: 224 FQKMPERNLASWNTMIAGYID---SGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVD 280
F +RNL+ + +G +D +I R++ + P + + + +K+ D
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYD 105
Query: 281 SAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
L QM+ K +L + + MI C+ + K A ++K + P+ +T ++
Sbjct: 106 LVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK--LGYEPNTITFST 163
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRD 396
+I+ G+ L+ ++ AL +D+ E+ H K D
Sbjct: 164 LIN---------------------GLCLEGRVSEAL-------ELVDRMVEMGH---KPD 192
Query: 397 LVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
L+ + ++ G ++G+ ++A+ L ++M+ PN VTY +L +G
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 457 SMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVE 516
M++ + Y I++D L + G LD A+ L N +E
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF----------------------NEME 290
Query: 517 LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDD-AKKLRMGVKGK 562
+ I + Y++L + N GRWDD AK LR +K K
Sbjct: 291 MKGITTN---------IITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 192/425 (45%), Gaps = 77/425 (18%)
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLF 224
+++ +L+ G+ + G +A + + + G DVI++N MISGY KAG ++ A S+
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 225 QKMP-ERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNS----VSLITMIAGYSKSGDV 279
+M ++ ++NT++ DSG + A EV D M +R+ ++ +I + V
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 280 DSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLA 335
A KL D+M ++ D+++YN ++ + + EA++ N M P P+ +T
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHN 313
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATA----------LVDLYAKSGSIDKA 385
++ + G RW+++ +L D L L++ + G + +A
Sbjct: 314 IILRSMCSTG-----RWMDAE-----KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 386 YELF-----HGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
++ HG + L +Y+ +++GF + AI+ E+M+ P++VTY +LT
Sbjct: 364 IDILEKMPQHGCQPNSL-SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 441 AYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNAD 500
A G VE+ N + G P++ Y ++D L +AG +A +L+ M +
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK---- 478
Query: 501 VWGALLLACRLHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKL----- 555
L+ DT+ Y SL+ + + G+ D+A K
Sbjct: 479 --------------------------DLKPDTITYSSLVGGL-SREGKVDEAIKFFHEFE 511
Query: 556 RMGVK 560
RMG++
Sbjct: 512 RMGIR 516
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/424 (22%), Positives = 191/424 (45%), Gaps = 33/424 (7%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-CARIQDKLGGVS 125
PD ++ +I + + G+ A+S+ + RM + P ++ L+S C + K
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYL 181
+ + Y V T L++ + VG A K+ DEM ++ +VV++N L++G
Sbjct: 227 LDRMLQRDCYPD-VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLA 233
K G LDEA + +P +VI+ N ++ G A L M + ++
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
++N +I G + A ++ + MP+ NS+S ++ G+ K +D A + ++M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 290 DEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
+ D+++YN M+ ++ K ++A+E+ N + P +T +VI ++ G
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL--SSKGCSPVLITYNTVIDGLAKAG 463
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFH-----GLRKRDLVAY 400
+ + + D ++LV ++ G +D+A + FH G+R + V +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP-NAVTF 522
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
++++ G + + AI M+ PN +YT ++ + G+ +E N + +
Sbjct: 523 NSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCN 582
Query: 461 NGLV 464
GL+
Sbjct: 583 KGLM 586
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 203/490 (41%), Gaps = 96/490 (19%)
Query: 101 CPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARK 160
C TS +ISS + +R +++L VS +V G + L YS G
Sbjct: 34 CRTSGSISSKIPLGSRKRNRLVLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSS 93
Query: 161 VFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDK------IPGKDVISWNSMISGYSKA 214
V A ++V S N+ L ++ G+L+E + +P D+I ++I G+ +
Sbjct: 94 VNSSFALEDVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVP--DIIPCTTLIRGFCRL 150
Query: 215 GNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYS 274
G +A IL E A+P + ++ MI+GY
Sbjct: 151 GKTRKA-------------------------AKILEILEGSGAVP--DVITYNVMISGYC 183
Query: 275 KSGDVDSAHKLFDQMD-EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT 333
K+G++++A + D+M D+++YN ++ + K K+A+E+ + ML+ + +PD +T
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD--CYPDVIT 241
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
T L++ + + A +L +R
Sbjct: 242 Y-----------------------------------TILIEATCRDSGVGHAMKLLDEMR 266
Query: 394 KR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
R D+V Y+ ++ G GR +AIK M PN++T+ IL + G
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALL 506
+ M G P V + I+++ L R G L A +++ MP QPN+ + LL
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 507 LA-C---RLHNNVE-LGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRMGVKG 561
C ++ +E L + + C D V Y ++L+++ + G+ +DA V+
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCY---PDIVTYNTMLTALCKD-GKVEDA------VEI 436
Query: 562 KNVIKTPGCS 571
N + + GCS
Sbjct: 437 LNQLSSKGCS 446
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/422 (18%), Positives = 183/422 (43%), Gaps = 59/422 (13%)
Query: 143 TALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP- 197
T L+ + ++G A K+ + + A +V+++N ++SGY KAG+++ A + D++
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200
Query: 198 GKDVISWNSMISGYSKAGNMDQANSLFQKMPERN----LASWNTMIAGYIDSGSILSARE 253
DV+++N+++ +G + QA + +M +R+ + ++ +I + A +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 254 VFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYA 305
+ D M R + V+ ++ G K G +D A K + M + +++++N ++
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 306 QNSKPKEALELFNYMLK---------------------------------PEINVHPDKM 332
+ +A +L ML+ P+ P+ +
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSL 380
Query: 333 TLASVISA-CSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHG 391
+ ++ C + ++E ++ G D ++ K G ++ A E+ +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 392 LRKRD----LVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGL 447
L + L+ Y+ +I G G+ AIKL ++M +++ P+ +TY+ ++ + G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 448 VEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI---INMPTQPNADVWGA 504
V+E F+ + G+ P + ++ L ++ D A + + IN +PN +
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 505 LL 506
L+
Sbjct: 560 LI 561
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 16/252 (6%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQD 119
+L +P ++ +I F +KG A+ + +M + G P S + + L + +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 120 KLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKN----VVSWNS 175
+ ++ G + +L K G V A ++ ++++ K ++++N+
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 176 LLSGYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSL---FQKMP 228
++ G KAG +A L D++ KD+ I+++S++ G S+ G +D+A F++M
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 229 ER-NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAH 283
R N ++N+++ G S A + M R N S +I G + G A
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 284 KLFDQMDEKDLL 295
+L +++ K L+
Sbjct: 575 ELLNELCNKGLM 586
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 208/453 (45%), Gaps = 26/453 (5%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ PD + ++ + + EAV+L QM M P + ++ + V
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGY 180
++ ++ G ++ +++ K GD+ A + +M E +VV + +++
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
++++A +LF ++ K +V+++NS+I G A+ L M ER N+
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 325
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
+++ +I ++ G ++ A +++D M KR + + ++I G+ +D A +F+
Sbjct: 326 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 289 MDEKD----LLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M KD +++YN +I + + + +E +ELF M + + + +T ++I Q
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQA 443
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAY 400
GD + + I + GV D + L+D K G ++KA +F L+K D+ Y
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ MI G G+ D LF + + + PN++ YT +++ + GL EE F MK+
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
+G +P Y ++ R G + ELI M
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 234/478 (48%), Gaps = 42/478 (8%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-CARIQDKLGGVS 125
P + ++ ++ +F +SL +MQ + + ++ + + C R Q L ++
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLA-LA 136
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYL 181
+ G++ LGY+ + ++LL+ Y + A + D+M + N V++N+L+ G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLA 233
EA L D++ + D+ ++ ++++G K G++D A SL +KM E ++
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+ T+I + ++ A +F M + N V+ ++I G A +L M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 290 DEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
E+ ++++++A+I + + K EA +L++ M+K I+ PD T +S+I+ G
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLIN-----G 369
Query: 346 DLEHWRWIES-HINDFGVVLD--DHLAT--ALVDLYAKSGSIDKAYELFHGLRKRDL--- 397
H R E+ H+ + + D ++ T L+ + K+ +++ ELF + +R L
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 398 -VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFN 456
V Y+ +I G G A K+F++M+ + + P+++TY+ +L G +E+ F
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 457 SMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLA-CR 510
++ + + P + Y IM++ + +AG +++ ++L ++ +PN ++ ++ CR
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 197/442 (44%), Gaps = 54/442 (12%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
PD F++G V+ ++G A+SL +M++ + ++ + + ++ ++
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYL 181
+ ++ G V +L+ G A ++ +M E+ NVV++++L+ ++
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLA 233
K G L EA+ L+D++ + D+ +++S+I+G+ +D+A +F+ M + N+
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 396
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
++NT+I G+ + + E+F M +R N+V+ T+I G ++GD D A K+F +M
Sbjct: 397 TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEH 349
V PD +T + ++ + G LE
Sbjct: 457 VSD---------------------------------GVPPDIITYSILLDGLCKYGKLEK 483
Query: 350 WRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIY 405
+ ++ + D + +++ K+G ++ ++LF L K +++ Y+ MI
Sbjct: 484 ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMIS 543
Query: 406 GFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
GF G +A LF +M + PN TY ++ A G M+ G V
Sbjct: 544 GFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVG 603
Query: 466 LVDHYGIMVDLLGRAGWLDEAY 487
+++++L G L+++Y
Sbjct: 604 DASTISMVINML-HDGRLEKSY 624
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 198/447 (44%), Gaps = 64/447 (14%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+AV L+ +M + P+ + L + A++ +S+ ++ L +Y L+
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 147 DLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKI----PG 198
+ + + + A V +M E ++V+ +SLL+GY + EA L D++
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREV 254
+ +++N++I G +A +L +M R +L ++ T++ G G I A +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 255 FDAMPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQ 306
M K + V T+I +V+ A LF +MD K ++++YN++I C
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
+ +A L + M++ +IN P+ +T
Sbjct: 303 YGRWSDASRLLSDMIERKIN--PNVVTF-------------------------------- 328
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQ 422
+AL+D + K G + +A +L+ + KR D+ YS++I GF ++ R +A +FE
Sbjct: 329 ---SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 423 MLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGW 482
M+ ++ PN+VTY ++ + A VEEG F M GLV Y ++ L +AG
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 483 LDEAYELIINMPTQ---PNADVWGALL 506
D A ++ M + P+ + LL
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILL 472
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 24/289 (8%)
Query: 54 SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS 113
S + ++ NP+ ++ +I F ++G+ +EA LY +M + + P SS +
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369
Query: 114 CARIQDKLGGVSIHGQVHVLGYDTCVYVQT--ALLDLYSKMGDVGTARKVFDEMAEK--- 168
+ D+L H ++ D V T L+ + K V ++F EM+++
Sbjct: 370 FC-MHDRLDEAK-HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 169 -NVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSL 223
N V++N+L+ G +AGD D AQ +F K+ D+I+++ ++ G K G +++A +
Sbjct: 428 GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV 487
Query: 224 FQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSK 275
F+ + E ++ ++N MI G +G + ++F ++ K N + TMI+G+ +
Sbjct: 488 FEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 276 SGDVDSAHKLFDQMDEKDLL----SYNAMIACYAQNSKPKEALELFNYM 320
G + A LF +M E L +YN +I ++ + EL M
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 213/462 (46%), Gaps = 36/462 (7%)
Query: 77 RFFS---QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL 133
R FS + Q+ + L QM+ G+ + +S + C R + S G++ L
Sbjct: 77 RLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKL 136
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAGDLDEA 189
GY+ + L++ G V A ++ D M E +++ N+L++G G + +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 190 QHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMI 239
L D++ P + +++ ++ K+G A L +KM ER + ++ +I
Sbjct: 197 VLLIDRMVETGFQPNE--VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 240 AGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK--- 292
G GS+ +A +F+ M K + + T+I G+ +G D KL M ++
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 293 -DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
D+++++A+I C+ + K +EA EL M++ I+ PD +T S+I + L+
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS--PDTVTYTSLIDGFCKENQLDKAN 372
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGF 407
+ + G + L++ Y K+ ID ELF + R D V Y+ +I GF
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV 467
G+ A +LF++M+ + P++V+Y +L G E+ F ++ + + +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALL 506
Y I++ + A +D+A++L ++P +P+ + ++
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 209/474 (44%), Gaps = 70/474 (14%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCP---TSHAISSALKSCARIQDKL 121
+ PD+ ++ +I +G+ EA+ L +M MG P T +A+ + L ++ D
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSD-- 195
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNSLL 177
V + ++ G+ +L + K G A ++ +M E+ + V ++ ++
Sbjct: 196 -AVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 178 SGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER--- 230
G K G LD A +LF+++ K D+I + ++I G+ AG D L + M +R
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKIT 314
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKL 285
++ +++ +I ++ G + A E+ M +R ++V+ ++I G+ K +D A+ +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 286 FDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
D M K ++ ++N +I Y + + + LELF KM+L
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR------------KMSLR------ 416
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DL 397
GVV D L+ + + G ++ A ELF + R D+
Sbjct: 417 -------------------GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
V+Y ++ G NG A+++FE++ + ++ Y I+ +A V++ + F S
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT---QPNADVWGALLLA 508
+ G+ P V Y IM+ L + G L EA L M PN + L+ A
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 190/434 (43%), Gaps = 68/434 (15%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
P+ ++G V++ + GQ A+ L +M+ + + S + + +
Sbjct: 209 QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFN 268
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYL 181
+ ++ + G+ + + T L+ + G K+ +M ++ +VV++++L+ ++
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLA 233
K G L EA+ L ++ + D +++ S+I G+ K +D+AN + M + N+
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIR 388
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
++N +I GY + I E+F M R ++V+ T+I G+ + G ++ A +LF +M
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 290 DEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
+ D++SY ++ N +P++ALE+F + KM L
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE-------KIEKSKMEL----------- 490
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYS 401
D G+ ++ + +D A++LF L K D+ Y+
Sbjct: 491 -------------DIGIY------NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAY-------NHAGLVEEGYWC 454
MI G G S+A LF +M + PN TY ++ A+ A L+EE C
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 455 FNSMKDNGLVPLVD 468
S+ + + +VD
Sbjct: 592 GFSVDASTVKMVVD 605
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 195/423 (46%), Gaps = 64/423 (15%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D +S+ VI + +F+ A+S+ +M + G P +SS + + + +
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNSLLSGYLKA 183
++ +G+ V + ++D K+G V A ++FD M V V++NSL++G +
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 184 GDLDEAQHLFDKIPGKD----VISWNSMISGYSKAGNMDQANSLFQKMPER----NLASW 235
G +A L + +D VI++ ++I + K G +A L+++M R ++ ++
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
N++I G G + A+++ D M + + V+ T+I G+ KS VD KLF +M +
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342
Query: 292 K----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
+ D ++YN +I Y Q +P A E+F+ M + P+ T + ++ G
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM-----DSRPNIRTYSILL-----YGLC 392
Query: 348 EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAM 403
+WR ++KA LF ++K D+ Y+ +
Sbjct: 393 MNWR------------------------------VEKALVLFENMQKSEIELDITTYNIV 422
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGL 463
I+G G DA LF + + + P++V+YT +++ + ++ + M+++GL
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Query: 464 VPL 466
+PL
Sbjct: 483 LPL 485
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 196/431 (45%), Gaps = 34/431 (7%)
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMP 228
W S + +L+E LF K+ P ++ ++ ++S +K+ N D SLF M
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 229 E----RNLASWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITMIAGYSKSGDVD 280
+L S+N +I + A V M K + V++ ++I G+ + V
Sbjct: 97 VCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 281 SAHKLFDQMDE----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
A L +M+E D++ YN +I + +A+ELF+ M + V D +T S
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD--GVRADAVTYNS 214
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLA-----TALVDLYAKSGSIDKAYELFHG 391
+++ G RW ++ +V+ D + TA++D++ K G +A +L+
Sbjct: 215 LVAGLCCSG-----RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 392 LRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGL 447
+ +R D+ Y+++I G ++GR +A ++ + M+ + P++VTY ++ + +
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 448 VEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLL 507
V+EG F M GLV Y ++ +AG D A E+ M ++PN + LL
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLY 389
Query: 508 ACRLHNNVELGEIAVQHCIKLESD-TVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVIK 566
++ VE + ++ K E + + Y+++ +G +DA L + K +K
Sbjct: 390 GLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG-LK 448
Query: 567 TPGCSWTQRVS 577
S+T +S
Sbjct: 449 PDVVSYTTMIS 459
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 169/372 (45%), Gaps = 65/372 (17%)
Query: 19 AKQIHAHILINGLHHLEPLFIHHIL---------LWDVNNYKPLSHYVHPILHNLHNPDS 69
AK + ++I+ HH+E I H L L + + V ++ + PD
Sbjct: 80 AKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDV 139
Query: 70 FSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ 129
+ +I F Q + +A+ L +M+ MG P ++ + +I V + +
Sbjct: 140 VTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDR 199
Query: 130 VHVLG-------YDT-----C-----------------------VYVQTALLDLYSKMGD 154
+ G Y++ C V TA++D++ K G
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 155 VGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNS 206
A K+++EM + +V ++NSL++G G +DEA+ + D + K DV+++N+
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 207 MISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGYIDSGSILSAREVFDAMPKRN 262
+I+G+ K+ +D+ LF++M +R L ++NT+I GY +G +A+E+F M R
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 263 SVSLIT-MIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELF 317
++ + ++ G + V+ A LF+ M E D+ +YN +I + ++A +LF
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 318 NYM----LKPEI 325
+ LKP++
Sbjct: 440 RSLSCKGLKPDV 451
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 234/481 (48%), Gaps = 48/481 (9%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-CARIQDKLGGVS 125
P F + ++ ++ +F +SL +MQR+G+ + + + C R Q L ++
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL-ALA 141
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYL 181
+ G++ LGY+ + ++LL+ Y + A + D+M E + +++ +L+ G
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLA 233
EA L D++ + +++++ +++G K G++D A +L KM E N+
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR-------NSVSLITMIAGYSKSGDVDSAHKLF 286
++T+I A +F M + SLI+ + Y + D A +L
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD---ASRLL 318
Query: 287 DQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
M E+ +++++NA+I + + K EA +L++ M+K I+ PD T +S+I+
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID--PDIFTYSSLIN--- 373
Query: 343 QLGDLEHWRWIES-HINDFGVVLD--DHLAT--ALVDLYAKSGSIDKAYELFHGLRKRDL 397
G H R E+ H+ + + D ++ T L++ + K+ ID+ ELF + +R L
Sbjct: 374 --GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 398 ----VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
V Y+ +I+GF +A +F+QM+ + + PN++TY +L G +E+
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 454 CFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGALLLA-C 509
F ++ + + P + Y IM++ + +AG +++ ++L ++ +P+ ++ ++ C
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFC 551
Query: 510 R 510
R
Sbjct: 552 R 552
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 218/461 (47%), Gaps = 37/461 (8%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-C--AR 116
I HNL +++ +I F ++ Q A++L +M ++G P+ +SS L C R
Sbjct: 116 ISHNL-----YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 117 IQDKLGGVSIHGQVHVLGYDTCVYVQTAL---LDLYSKMGD-VGTARKVFDEMAEKNVVS 172
I D V++ Q+ +GY T L L L++K + V ++ + N+V+
Sbjct: 171 ISD---AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP 228
+ +++G K GD+D A +L +K+ +V+ ++++I K + D A +LF +M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 229 ER----NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVD 280
+ N+ +++++I+ + A + M +R N V+ +I + K G +
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 281 SAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
A KL+D+M ++ D+ +Y+++I + + + EA +F M+ + P+ +T +
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD--CFPNVVTYNT 405
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR- 395
+I+ + ++ + ++ G+V + T L+ + ++ D A +F +
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 396 ---DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGY 452
+++ Y+ ++ G NG+ A+ +FE + + P + TY ++ AG VE+G+
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525
Query: 453 WCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
F S+ G+ P V Y M+ R G +EA L M
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 196/447 (43%), Gaps = 64/447 (14%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+A+ L+ M + P+ + L + A+++ +S+ ++ LG +Y L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 147 DLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP----G 198
+ + + + A + +M E ++V+ +SLL+GY + +A L D++
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM 258
D I++ ++I G +A +L +M +R
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGC-------------------------- 221
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEAL 314
+ N V+ ++ G K GD+D A L ++M+ E +++ Y+ +I + +AL
Sbjct: 222 -QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR--------WIESHINDFGVVLDD 366
LF M V P+ +T +S+IS L + E W IE IN V +
Sbjct: 281 NLFTEM--ENKGVRPNVITYSSLISC---LCNYERWSDASRLLSDMIERKINPNVVTFN- 334
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQ 422
AL+D + K G + +A +L+ + KR D+ YS++I GF ++ R +A +FE
Sbjct: 335 ----ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 423 MLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGW 482
M+ ++ PN+VTY ++ + A ++EG F M GLV Y ++ +A
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARD 450
Query: 483 LDEA---YELIINMPTQPNADVWGALL 506
D A ++ +++ PN + LL
Sbjct: 451 CDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ ++ +I F + + E V L+ +M + GL + ++ + + +D +
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLK 182
Q+ G + LLD K G + A VF+ + E + ++N ++ G K
Sbjct: 458 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 183 AGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE 229
AG +++ LF + K DVI +N+MISG+ + G ++A++LF+KM E
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 216/457 (47%), Gaps = 34/457 (7%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-C--ARIQDKL 121
+ PD+ ++ ++ F +G+ EAV+L +M M P +S+ + C R+ + L
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKN----VVSWNSLL 177
V I V G+ +L+ K G+ A +F +M E+N VV ++ ++
Sbjct: 196 --VLIDRMVE-YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 178 SGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNL- 232
K G D+A LF+++ K DV++++S+I G G D + ++M RN+
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 233 ---ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKL 285
+++ +I ++ G +L A+E+++ M R ++++ ++I G+ K + A+++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 286 FDQM----DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
FD M E D+++Y+ +I Y + + + + LF + + P+ +T +++
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPNTITYNTLVLGF 430
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV--- 398
Q G L + + + GV L+D +G ++KA E+F ++K +
Sbjct: 431 CQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Query: 399 -AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
Y+ +I+G + DA LF + + + P++VTY ++ G + E F
Sbjct: 491 GIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRK 550
Query: 458 MKDNGLVPLVDHYGIMVDL-LGRAGWLDEAYELIINM 493
MK++G P Y I++ LG +G + + ELI M
Sbjct: 551 MKEDGCTPDDFTYNILIRAHLGGSGLI-SSVELIEEM 586
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 181/395 (45%), Gaps = 45/395 (11%)
Query: 115 ARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNV 170
R + L S+ G+ LGY+ + L++ + G V A + D M E ++
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 171 VSWNSLLSGYLKAGDLDEAQHLFDKIP----GKDVISWNSMISGYSKAGNMDQANSLFQK 226
V+ ++L++G G + EA L D++ D +++ +++ K+GN A LF+K
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 227 MPERNLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLF 286
M ERN+ + S++ V D++ K G D A LF
Sbjct: 236 MEERNIKA------------SVVQYSIVIDSL---------------CKDGSFDDALSLF 268
Query: 287 DQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
++M+ K D+++Y+++I + K + ++ M+ N+ PD +T +++I
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR--NIIPDVVTFSALIDVFV 326
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLV 398
+ G L + + + + G+ D +L+D + K + +A ++F + + D+V
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
YS +I + R D ++LF ++ + + PN +TY ++ + +G + F M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 459 KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
G+ P V YGI++D L G L++A E+ M
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/438 (23%), Positives = 197/438 (44%), Gaps = 41/438 (9%)
Query: 149 YSKMGDVGTARKVFDEMAEKNVVSWNSLLSGY--LKAGD-LDEAQHLFDKIPGKDVISWN 205
++++ + GT+ + + E + L +G +K D +D + + P I +N
Sbjct: 15 FTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFN 74
Query: 206 SMISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMPK- 260
+ S ++ D + M E ++ + MI Y +L A V K
Sbjct: 75 RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 134
Query: 261 ---RNSVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYAQNSKPKEA 313
++++ T++ G+ G V A L D+M E DL++ + +I + EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 314 LELFNYMLKPEINVHPDKMTLASVISACSQLGD----LEHWRWIESHINDFGVVLDDHLA 369
L L + M+ E PD++T V++ + G+ L+ +R +E VV
Sbjct: 195 LVLIDRMV--EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ----Y 248
Query: 370 TALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFEQMLG 425
+ ++D K GS D A LF+ + K D+V YS++I G +G+ D K+ +M+G
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG 308
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDE 485
NI P++VT++ ++ + G + E +N M G+ P Y ++D + L E
Sbjct: 309 RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHE 368
Query: 486 A---YELIINMPTQPNADVWGALL----LACRLHNNVEL-GEIAVQHCIKLESDTVGYYS 537
A ++L+++ +P+ + L+ A R+ + + L EI+ + I +T+ Y +
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI---PNTITYNT 425
Query: 538 LLSSIYANLGRWDDAKKL 555
L+ + G+ + AK+L
Sbjct: 426 LVLG-FCQSGKLNAAKEL 442
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 170/363 (46%), Gaps = 42/363 (11%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQ-- 129
+ VI + G F +A+SL+ +M+ G+ SS + GG+ G+
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI----------GGLCNDGKWD 297
Query: 130 ------VHVLGYDTCVYVQT--ALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNSLL 177
++G + V T AL+D++ K G + A+++++EM + + +++NSL+
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLI 357
Query: 178 SGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER--- 230
G+ K L EA +FD + K D+++++ +I+ Y KA +D LF+++ +
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI 417
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMPKRN-SVSLIT---MIAGYSKSGDVDSAHKL 285
N ++NT++ G+ SG + +A+E+F M R S++T ++ G +G+++ A ++
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEI 477
Query: 286 FDQMDEKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
F++M + + YN +I SK +A LF + + V PD +T +I
Sbjct: 478 FEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL--SDKGVKPDVVTYNVMIGGL 535
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYS 401
+ G L + + + G DD L+ + + + EL ++ A S
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Query: 402 AMI 404
+ I
Sbjct: 596 STI 598
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 64/275 (23%)
Query: 291 EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHW 350
E D+ + MI CY + K A + K + PD +T +++++
Sbjct: 102 EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWK--LGYEPDTITFSTLVNG---------- 149
Query: 351 RWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGIN 410
+E +++ A ALVD + ++ DLV S +I G +
Sbjct: 150 FCLEGRVSE---------AVALVD------------RMVEMKQRPDLVTVSTLINGLCLK 188
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
GR S+A+ L ++M+ P+ VTY +L +G F M++ + V Y
Sbjct: 189 GRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQY 248
Query: 471 GIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCIKLES 530
I++D L + G D+A L N +E+ I ++
Sbjct: 249 SIVIDSLCKDGSFDDALSL----------------------FNEMEMKGI--------KA 278
Query: 531 DTVGYYSLLSSIYANLGRWDDAKKLRMGVKGKNVI 565
D V Y SL+ + N G+WDD K+ + G+N+I
Sbjct: 279 DVVTYSSLIGGL-CNDGKWDDGAKMLREMIGRNII 312
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 197/423 (46%), Gaps = 29/423 (6%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D ++ ++ F Q Q A S +M ++G P +S + +S+
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKA 183
Q+ +G V + T ++D K G V A +FD+M +VV + SL++G +
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 184 GDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SW 235
G +A L + + DVI++N++I + K G A L+ +M ++A ++
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDE 291
++I G+ G + AR++F M + + V+ ++I G+ K VD A K+F +M +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 292 KDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
K L ++Y +I + Q KP A E+F++M+ V P+ T ++ G +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR--GVPPNIRTYNVLLHCLCYNGKV 403
Query: 348 EHWRWIESHINDF---GVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VAY 400
+ I + GV + L+ +G ++KA +F +RKR++ + Y
Sbjct: 404 KKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITY 463
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ +I G G+ +A+ LF + + + PN+VTYT +++ GL E + F MK+
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Query: 461 NGL 463
+G+
Sbjct: 524 DGV 526
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 227/503 (45%), Gaps = 53/503 (10%)
Query: 23 HAHILINGLHHLE-----PLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIR 77
+ IL NGLH L+ LF H + +PL P + ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMV------ESRPL-------------PSIIDFTKLLN 80
Query: 78 FFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDT 137
++ +F ++L +Q MG+ + + + + S G++ LG++
Sbjct: 81 VIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP 140
Query: 138 CVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAGDLDEAQHLF 193
+ T+L++ + + A + ++M E +VV + +++ K G ++ A LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 194 DKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGYIDS 245
D++ DV+ + S+++G +G A+SL + M +R + ++N +I ++
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 246 GSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSY 297
G L A E+++ M + N + ++I G+ G VD A ++F M+ K D+++Y
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 298 NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
++I + + K +A+++F M + + + +T ++I Q+G + + SH+
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEM--SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 358 NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL--VA-----YSAMIYGFGIN 410
GV + L+ +G + KA +F ++KR++ VA Y+ +++G N
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
G+ A+ +FE M + ++TYT I+ AG V+ F S+ G+ P V Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 471 GIMVDLLGRAGWLDEAYELIINM 493
M+ L R G EA+ L M
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKM 521
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 171/379 (45%), Gaps = 32/379 (8%)
Query: 158 ARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIP----GKDVISWNSMIS 209
A +F M E +++ + LL+ K D +L D + D+ + N +++
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 210 GYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMP----KR 261
+ ++ A+S KM E ++ ++ ++I G+ + A + + M K
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 262 NSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELF 317
+ V T+I K+G V+ A LFDQM+ D++ Y +++ + + ++A L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
M K +I PD +T ++I A + G + + + + + T+L++ +
Sbjct: 236 RGMTKRKIK--PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 378 KSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLV 433
G +D+A ++F+ + + D+VAY+++I GF + DA+K+F +M + + N +
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 434 TYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
TYT ++ + G F+ M G+ P + Y +++ L G + +A + +M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Query: 494 PTQ------PNADVWGALL 506
+ PN + LL
Sbjct: 414 QKREMDGVAPNIWTYNVLL 432
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 216/470 (45%), Gaps = 27/470 (5%)
Query: 41 HILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGL 100
H+LL + + Y IL P ++ ++ ++ + L +M+ +GL
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFR-PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGL 254
Query: 101 CPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARK 160
P + + ++ R I ++ G V T L+D + A++
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 161 VFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYS 212
VF++M + + V++ +LL + DLD + + ++ DV+++ ++
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 213 KAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSV 264
KAGN +A M ++ NL ++NT+I G + + A E+F M K +
Sbjct: 375 KAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 265 SLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYM 320
+ I I Y KSGD SA + F++M K ++++ NA + A+ + +EA ++F Y
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF-YG 493
Query: 321 LKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSG 380
LK +I + PD +T ++ S++G+++ + S + + G D + +L++ K+
Sbjct: 494 LK-DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552
Query: 381 SIDKAYELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYT 436
+D+A+++F ++ K +V Y+ ++ G G NG+ +AI+LFE M+ + PN +T+
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 437 GILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA 486
+ V M D G VP V Y ++ L + G + EA
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 215/505 (42%), Gaps = 103/505 (20%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRM-------------GLCPTS------HAI 107
PD F++ +I + GQ EA+ + QM+++ G+ S I
Sbjct: 641 PDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 108 SSALKSCARI------QDKLGGV--------SIHGQVHVLGYDTCVYVQTALLDL--YS- 150
++ L +CA +D +G + ++ ++ C + L+ + YS
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 151 KMGDVGTARKVFDEMA-----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DV 201
K +V AR +F++ + + ++N L+ G L+A ++ AQ +F ++ DV
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVF-D 256
++N ++ Y K+G +D+ L+++M E N + N +I+G + +G++ A +++ D
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 257 AMPKRN----SVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYAQNS 308
M R+ + + +I G SKSG + A +LF+ M + + YN +I + +
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 309 KPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL 368
+ A LF M+K V PD T
Sbjct: 941 EADAACALFKRMVKE--GVRPDLKTY---------------------------------- 964
Query: 369 ATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQM- 423
+ LVD G +D+ F L++ D+V Y+ +I G G + R +A+ LF +M
Sbjct: 965 -SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
I P+L TY ++ AG+VEE +N ++ GL P V + ++ +G
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083
Query: 484 DEAYELIINMPT---QPNADVWGAL 505
+ AY + M T PN + L
Sbjct: 1084 EHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 120/532 (22%), Positives = 223/532 (41%), Gaps = 86/532 (16%)
Query: 60 ILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTS---HAISSALKSCAR 116
++ N PD +I + + EA ++++M+ M L PT + + + L +
Sbjct: 529 MMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGK 588
Query: 117 IQDKL----GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----K 168
IQ+ + G V + + ++T L D K +V A K+ +M +
Sbjct: 589 IQEAIELFEGMVQKGCPPNTITFNT-------LFDCLCKNDEVTLALKMLFKMMDMGCVP 641
Query: 169 NVVSWNSLLSGYLKAGDLDEAQHLF---DKIPGKDVISWNSMISGYSKAGNMDQA----- 220
+V ++N+++ G +K G + EA F K+ D ++ +++ G KA ++ A
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 221 NSLFQKMPERNLASWNTMIAGY-----IDSGSILSAREVFDAMPKRNSVSLITMIAGYSK 275
N L+ + W +I ID+ S R V + + + L+ +I K
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK 761
Query: 276 SGDVDSAHKLFDQMDE----------------------------------------KDLL 295
+V A LF++ + D+
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 296 SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIES 355
+YN ++ Y ++ K E EL+ M E + +T VIS + G+++ +
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHE--CEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 356 HI---NDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIYGFG 408
+ DF + L+D +KSG + +A +LF G+ + + Y+ +I GFG
Sbjct: 880 DLMSDRDFSPTACTY--GPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVD 468
G A A LF++M+ E + P+L TY+ ++ G V+EG F +K++GL P V
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 469 HYGIMVDLLGRAGWLDEAYELIINMPTQ----PNADVWGALLLACRLHNNVE 516
Y ++++ LG++ L+EA L M T P+ + +L+L + VE
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE 1049
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 192/450 (42%), Gaps = 26/450 (5%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
+++S+ +I + EA+ +Y +M G P+ SS + + +D + +
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKA 183
++ LG VY T + + + G + A ++ M ++ +VV++ L+ A
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 184 GDLDEAQHLFDKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASW 235
LD A+ +F+K+ D +++ +++ +S ++D + +M + ++ ++
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD- 290
++ +G+ A + D M + N + T+I G + +D A +LF M+
Sbjct: 367 TILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 291 ---EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDL 347
+ +Y I Y ++ ALE F M + P+ + + + + ++ G
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK--GIAPNIVACNASLYSLAKAGRD 484
Query: 348 EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAM 403
+ I + D G+V D ++ Y+K G ID+A +L + + D++ +++
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 404 IYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGL 463
I R +A K+F +M + P +VTY +L G ++E F M G
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 464 VPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
P + + D L + + A +++ M
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 180/425 (42%), Gaps = 55/425 (12%)
Query: 159 RKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG----KDVISWNSMISGYSKA 214
R++ E ++ +++SL+ G K D+D L ++ +V ++ I +A
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 215 GNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVFDAMP----KRNSVSL 266
G +++A + ++M + ++ ++ +I + + A+EVF+ M K + V+
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 267 ITMIAGYSKSGDVDSAHKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN 326
IT++ +S + D+DS + + +M EKD
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEM-EKD--------------------------------G 358
Query: 327 VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAY 386
PD +T ++ A + G+ + D G++ + H L+ + +D A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 387 ELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAY 442
ELF + K Y I +G +G + A++ FE+M + I PN+V L +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 443 NHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM---PTQPNA 499
AG E F +KD GLVP Y +M+ + G +DEA +L+ M +P+
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 500 DVWGALLLACRLHNNVELG--EIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLRM 557
V +L+ + V+ +KL+ V Y +LL+ + N G+ +A +L
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN-GKIQEAIELFE 597
Query: 558 GVKGK 562
G+ K
Sbjct: 598 GMVQK 602
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 198/432 (45%), Gaps = 73/432 (16%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQ-MQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+P++ G ++ F++KG+ A +L +Q + G C +++ + L R++D +
Sbjct: 135 SPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF 194
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM-------AEKNVVSWNSLL 177
H L + +C +T + L + VG A K + + E ++V++N+L+
Sbjct: 195 DEH-----LRFQSCNDTKTFNI-LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 178 SGYLKAGDLDEAQHLFDKIPG-----KDVISWNSMISGYSKAGNMDQANSLFQKMPERNL 232
G+ K+ +L++A +F + DV+++ SMISGY KAG M +A+SL M +
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 233 ----ASWNTMIAGYIDSGSILSAREV------FDAMPKRNSVSLITMIAGYSKSGDVDSA 282
++N ++ GY +G +L+A E+ F P + V+ ++I GY + G V
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP--DVVTFTSLIDGYCRVGQVSQG 366
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
+L+++M+ + + P+ T + +I+A
Sbjct: 367 FRLWEEMNARGMF---------------------------------PNAFTYSILINALC 393
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLV 398
L R + + ++ + ++D + K+G +++A + + K+ D +
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
++ +I G + GR +A+ +F +M+ P+ +T + +L+ AG+ +E Y N +
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQI 512
Query: 459 ----KDNGLVPL 466
+ N +VPL
Sbjct: 513 ARKGQSNNVVPL 524
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 165/370 (44%), Gaps = 44/370 (11%)
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDE----MAEKNVVSWNSLLSGYLKAGDLDEAQH 191
+ C V +LL+ K+ V A K+FDE + + ++N L+ G G ++A
Sbjct: 168 EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALE 227
Query: 192 LFDKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGS 247
L + G D++++N++I G+ K+ +++A+ +F+ + SGS
Sbjct: 228 LLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD----------------VKSGS 271
Query: 248 ILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL----LSYNAMIAC 303
+ S + V+ +MI+GY K+G + A L D M + +++N ++
Sbjct: 272 VCSP----------DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
YA+ + A E+ M+ PD +T S+I ++G + + +N G+
Sbjct: 322 YAKAGEMLTAEEIRGKMI--SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSAMIYGFGINGRASDAIKL 419
+ + L++ + KA EL L +D++ Y+ +I GF G+ ++A +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 420 FEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGR 479
E+M + P+ +T+T ++ + G + E F+ M G P ++ L +
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 480 AGWLDEAYEL 489
AG EAY L
Sbjct: 500 AGMAKEAYHL 509
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 150/340 (44%), Gaps = 19/340 (5%)
Query: 172 SWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSM----ISGYSKAGNMDQANSLFQKM 227
++N L KAG D A +F+ + V N + +S +++ G + A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 228 PERNLASW--NTMIAGYIDSGSILSAREVFDAMPKRNSV----SLITMIAGYSKSGDVDS 281
E N+++ + + A ++FD + S + +I G G +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 282 AHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
A +L M E D+++YN +I + ++++ +A E+F + + PD +T S+
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CSPDVVTYTSM 283
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK--- 394
IS + G + + + G+ + LVD YAK+G + A E+ +
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 395 -RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
D+V ++++I G+ G+ S +L+E+M + PN TY+ ++ A + + +
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 454 CFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
+ ++P Y ++D +AG ++EA ++ M
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 198/432 (45%), Gaps = 73/432 (16%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQ-MQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+P++ G ++ F++KG+ A +L +Q + G C +++ + L R++D +
Sbjct: 135 SPNNRLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLF 194
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM-------AEKNVVSWNSLL 177
H L + +C +T + L + VG A K + + E ++V++N+L+
Sbjct: 195 DEH-----LRFQSCNDTKTFNI-LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLI 248
Query: 178 SGYLKAGDLDEAQHLFDKIPG-----KDVISWNSMISGYSKAGNMDQANSLFQKMPERNL 232
G+ K+ +L++A +F + DV+++ SMISGY KAG M +A+SL M +
Sbjct: 249 QGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGI 308
Query: 233 ----ASWNTMIAGYIDSGSILSAREV------FDAMPKRNSVSLITMIAGYSKSGDVDSA 282
++N ++ GY +G +L+A E+ F P + V+ ++I GY + G V
Sbjct: 309 YPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFP--DVVTFTSLIDGYCRVGQVSQG 366
Query: 283 HKLFDQMDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
+L+++M+ + + P+ T + +I+A
Sbjct: 367 FRLWEEMNARGMF---------------------------------PNAFTYSILINALC 393
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLV 398
L R + + ++ + ++D + K+G +++A + + K+ D +
Sbjct: 394 NENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKI 453
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
++ +I G + GR +A+ +F +M+ P+ +T + +L+ AG+ +E Y N +
Sbjct: 454 TFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQI 512
Query: 459 ----KDNGLVPL 466
+ N +VPL
Sbjct: 513 ARKGQSNNVVPL 524
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 165/370 (44%), Gaps = 44/370 (11%)
Query: 136 DTCVYVQTALLDLYSKMGDVGTARKVFDE----MAEKNVVSWNSLLSGYLKAGDLDEAQH 191
+ C V +LL+ K+ V A K+FDE + + ++N L+ G G ++A
Sbjct: 168 EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALE 227
Query: 192 LFDKIPG----KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGS 247
L + G D++++N++I G+ K+ +++A+ +F+ + SGS
Sbjct: 228 LLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD----------------VKSGS 271
Query: 248 ILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL----LSYNAMIAC 303
+ S + V+ +MI+GY K+G + A L D M + +++N ++
Sbjct: 272 VCSP----------DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
YA+ + A E+ M+ PD +T S+I ++G + + +N G+
Sbjct: 322 YAKAGEMLTAEEIRGKMI--SFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMF 379
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSAMIYGFGINGRASDAIKL 419
+ + L++ + KA EL L +D++ Y+ +I GF G+ ++A +
Sbjct: 380 PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVI 439
Query: 420 FEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGR 479
E+M + P+ +T+T ++ + G + E F+ M G P ++ L +
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 480 AGWLDEAYEL 489
AG EAY L
Sbjct: 500 AGMAKEAYHL 509
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 150/340 (44%), Gaps = 19/340 (5%)
Query: 172 SWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSM----ISGYSKAGNMDQANSLFQKM 227
++N L KAG D A +F+ + V N + +S +++ G + A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 228 PERNLASW--NTMIAGYIDSGSILSAREVFDAMPKRNSV----SLITMIAGYSKSGDVDS 281
E N+++ + + A ++FD + S + +I G G +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 282 AHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASV 337
A +L M E D+++YN +I + ++++ +A E+F + + PD +T S+
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV-CSPDVVTYTSM 283
Query: 338 ISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRK--- 394
IS + G + + + G+ + LVD YAK+G + A E+ +
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 395 -RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
D+V ++++I G+ G+ S +L+E+M + PN TY+ ++ A + + +
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 454 CFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM 493
+ ++P Y ++D +AG ++EA ++ M
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM 443
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/458 (22%), Positives = 206/458 (44%), Gaps = 50/458 (10%)
Query: 61 LHNLHNPDSFSWGC----------------VIRFFSQKGQFIEAVSLYVQMQRMGLCPTS 104
LH + D+FS C V+ ++ +F + LY +M+ +G+
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDL 114
Query: 105 HAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDE 164
++ + + R +++ G++ LG+ + +LL+ + + A + D
Sbjct: 115 YSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS 174
Query: 165 M----AEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGN 216
M NVV +N++++G K DL+ A +F + K D +++N++ISG S +G
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 217 MDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI----T 268
A L + M +R N+ + +I ++ G++L AR ++ M +R+ V + +
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 269 MIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPE 324
+I G+ G + A +FD M K D+++YN +I + ++ + ++ ++LF M
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ- 353
Query: 325 INVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDK 384
+ D T ++I Q G L + + + + D GV D L+D +G I+K
Sbjct: 354 -GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 385 AYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILT 440
A + L+K D++ Y+ +I G + +A LF + + + P+ + Y +++
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 441 AYNHAGLVEEGYWCFNSMKDNGLVP--------LVDHY 470
GL E MK++G +P L DHY
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 201/455 (44%), Gaps = 65/455 (14%)
Query: 84 QFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQT 143
+F +A SL+ +M + P+ + L A++ + ++ ++ LG +Y T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 144 ALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG- 198
L+ + + + A + +M + ++V+ SLL+G+ + EA L D + G
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 199 ---KDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMIAGYIDSGSILSA 251
+V+ +N++I+G K +++ A +F M ++ + ++NT+I+G +SG A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 252 REVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIAC 303
+ M KR N + +I + K G++ A L+ +M + ++ +YN++I
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
+ + +A +F+ M+ PD +T ++I+
Sbjct: 299 FCIHGCLGDAKYMFDLMVSK--GCFPDVVTYNTLITG----------------------- 333
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV----AYSAMIYGFGINGRASDAIKL 419
+ KS ++ +LF + + LV Y+ +I+G+ G+ + A K+
Sbjct: 334 ------------FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 420 FEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGR 479
F +M+ + P++VTY +L + G +E+ ++ + + + Y I++ L R
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 480 AGWLDEAYELIINMP---TQPNADVWGALLLA-CR 510
L EA+ L ++ +P+A + ++ CR
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 172/394 (43%), Gaps = 47/394 (11%)
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMP 228
+ L L D+A LF ++ P ++ + +++ +K D L+ KM
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 106
Query: 229 ----ERNLASWNTMIAGYIDSGSILSAREVFDAMPK---RNS-VSLITMIAGYSKSGDVD 280
+L S+ +I + + A + M K R S V+L +++ G+ +
Sbjct: 107 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 166
Query: 281 SAHKLFDQMDE----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
A L D MD +++ YN +I +N ALE+F M K + D +T +
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK--GIRADAVTYNT 224
Query: 337 VISACSQLGDLEHWRWIESHINDFGVVLDDHLA----------TALVDLYAKSGSIDKAY 386
+IS S G RW D +L D + TAL+D + K G++ +A
Sbjct: 225 LISGLSNSG-----RW-----TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 387 ELFHGLRKRDLV----AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAY 442
L+ + +R +V Y+++I GF I+G DA +F+ M+ + P++VTY ++T +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 443 NHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA---YELIINMPTQPNA 499
+ VE+G F M GLV Y ++ +AG L+ A + +++ P+
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 500 DVWGALLLACRLHN-NVELGEIAVQHCIKLESDT 532
+ +LL C +N +E + V+ K E D
Sbjct: 395 VTYN-ILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/467 (20%), Positives = 215/467 (46%), Gaps = 40/467 (8%)
Query: 23 HAHILINGLHHLEPLFIHHILLWDVNNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQK 82
+ IL NGLH+L+ + ++H+ P + ++ ++
Sbjct: 51 YRKILRNGLHNLQ--------------FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKM 96
Query: 83 GQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQ 142
++ +SL+ QMQ +G+ P + + G++ LG++ +
Sbjct: 97 NRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTF 156
Query: 143 TALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKI-- 196
T+LL+ Y + A +FD++ + NVV++ +L+ K L+ A LF+++
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 197 --PGKDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILS 250
+V+++N++++G + G A L + M +R N+ ++ +I ++ G ++
Sbjct: 217 NGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME 276
Query: 251 AREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIA 302
A+E+++ M + + + ++I G G +D A ++F M+ + + Y +I
Sbjct: 277 AKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIH 336
Query: 303 CYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGV 362
+ ++ + ++ +++F M + V + +T +I +G + + + + ++
Sbjct: 337 GFCKSKRVEDGMKIFYEM--SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSAMIYGFGINGRASDAIK 418
D L+D +G ++KA +F +RKR++ V Y+ +I G G+ DA
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 419 LFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
LF + + + PN++TYT +++ + GL+ E F MK++G +P
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 196/446 (43%), Gaps = 29/446 (6%)
Query: 84 QFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQT 143
QF +A+ L+ +M P+ + L A++ +S+ Q+ +LG +
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 144 ALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG- 198
++ A +M E ++V++ SLL+GY +++A LFD+I G
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 199 ---KDVISWNSMISGYSKAGNMDQANSLFQKM----PERNLASWNTMIAGYIDSGSILSA 251
+V+++ ++I K +++ A LF +M N+ ++N ++ G + G A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 252 REVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIAC 303
+ M KR N ++ +I + K G + A +L++ M + D+ +Y ++I
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
EA ++F M + +P+++ ++I + +E I ++ GVV
Sbjct: 303 LCMYGLLDEARQMFYLMERN--GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKL 419
+ T L+ Y G D A E+F+ + R D+ Y+ ++ G NG+ A+ +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 420 FEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGR 479
FE M + N+VTYT I+ G VE+ + F S+ G+ P V Y M+ R
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 480 AGWLDEAYELIINMPTQ---PNADVW 502
G + EA L M PN V+
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 153/349 (43%), Gaps = 32/349 (9%)
Query: 230 RNLASWNTMIAGYIDSGSILSAREVFDAM----PKRNSVSLITMIAGYSKSGDVDSAHKL 285
R +S+ ++ + + A ++F M P + + +++ +K D L
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 286 FDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
F+QM L + N ++ C +S+P A M+K + PD +T S+++
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMK--LGFEPDLVTFTSLLNGY 163
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLA------TALVDLYAKSGSIDKAYELFHGL--- 392
HW IE I F +L T L+ K+ ++ A ELF+ +
Sbjct: 164 C------HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 393 -RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
+ ++V Y+A++ G GR DA L M+ I PN++T+T ++ A+ G + E
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 452 YWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLA 508
+N M + P V YG +++ L G LDEA ++ M PN ++ L+
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 509 CRLHNNVELG-EIAVQHCIK-LESDTVGYYSLLSSIYANLGRWDDAKKL 555
VE G +I + K + ++T+ Y L+ Y +GR D A+++
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG-YCLVGRPDVAQEV 385
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 191/409 (46%), Gaps = 25/409 (6%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD ++ +I F + G+ + Y +M+ GL P + S+ + + + +
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYLK 182
+ + +G Y T+L+D K+G++ A ++ +EM E NVV++ +L+ G
Sbjct: 390 YVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCD 449
Query: 183 AGDLDEAQHLFDKIPGKDVI----SWNSMISGYSKAGNMDQANSLFQKMPER----NLAS 234
A + EA+ LF K+ VI S+N++I G+ KA NMD+A L ++ R +L
Sbjct: 450 AERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLL 509
Query: 235 WNTMIAGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+ T I G I +A+ V + M K NS+ T++ Y KSG+ L D+M
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 291 EKDL----LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
E D+ +++ +I +N +A++ FN + + + + ++I +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR-ISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL----RKRDLVAYSA 402
+E + + G+V D T+L+D K G++ +A L + K DL+AY++
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEG 451
+++G + A E+M+GE I P+ V +L + G ++E
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 191/426 (44%), Gaps = 32/426 (7%)
Query: 144 ALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGK 199
LL ++K+G ++ F +M A V ++N ++ K GD++ A+ LF+++ +
Sbjct: 232 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 200 ----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSA 251
D +++NSMI G+ K G +D F++M E ++ ++N +I + G +
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 252 REVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL----SYNAMIAC 303
E + M K N VS T++ + K G + A K + M L+ +Y ++I
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
+ +A L N ML ++ V + +T ++I ++ + ++ GV+
Sbjct: 412 NCKIGNLSDAFRLGNEML--QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Query: 364 LDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKL 419
+ AL+ + K+ ++D+A EL + L+ R DL+ Y I+G + A +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 420 FEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGR 479
+M I N + YT ++ AY +G EG + MK+ + V + +++D L +
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 480 AGWLDEAYELIINMPT----QPNADVWGALLLACRLHNNVELGEIAVQHCIK--LESDTV 533
+ +A + + Q NA ++ A++ N VE + ++ L D
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 534 GYYSLL 539
Y SL+
Sbjct: 650 AYTSLM 655
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 191/476 (40%), Gaps = 97/476 (20%)
Query: 83 GQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQ 142
G EA+ + +M+R + P + + + L A++ + G V+
Sbjct: 206 GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY 265
Query: 143 TALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPG 198
++D K GDV AR +F+EM + + V++NS++ G+ K G LD+ F+++
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 199 ----KDVISWNSMISGYSKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILS 250
DVI++N++I+ + K G + +++M + N+ S++T++ + G +
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 251 AREVFDAMPKR---------------------------------------NSVSLITMIA 271
A + + M + N V+ +I
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 272 GYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV 327
G + + A +LF +MD +L SYNA+I + + ALEL N + +
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL--KGRGI 503
Query: 328 HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGS------ 381
PD + + I L +E + + + + + G+ + + T L+D Y KSG+
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 382 -IDKAYEL------------FHGLRKRDLVA---------------------YSAMIYGF 407
+D+ EL GL K LV+ ++AMI G
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGL 463
+ + A LFEQM+ + + P+ YT ++ G V E + M + G+
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 153/361 (42%), Gaps = 68/361 (18%)
Query: 173 WNSLLSGYLKAGDLDEAQHLFDKIPGKDVI----SWNSMISGYSKAGNMDQANSLFQKM- 227
+++L S + G L+EA F K+ V S N ++ ++K G D F+ M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 228 ---PERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVD 280
+ ++N MI G + +AR +F+ M R ++V+ +MI G+ K G +D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 281 SAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYM----LKPEINVHPDKM 332
F++M E D+++YNA+I C+ + K LE + M LKP + +
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY---- 370
Query: 333 TLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL 392
+ LVD + K G + +A + + +
Sbjct: 371 -------------------------------------STLVDAFCKEGMMQQAIKFYVDM 393
Query: 393 RKRDLV----AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLV 448
R+ LV Y+++I G SDA +L +ML + N+VTYT ++ A +
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 449 EEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPNADVWGAL 505
+E F M G++P + Y ++ +A +D A EL+ + +P+ ++G
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 506 L 506
+
Sbjct: 514 I 514
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 16/270 (5%)
Query: 297 YNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESH 356
++A+ + +EA++ F+ M + V P + ++ ++LG + +
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKR--FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 357 INDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGR 412
+ G ++D K G ++ A LF ++ R D V Y++MI GFG GR
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGI 472
D + FE+M P+++TY ++ + G + G + MK NGL P V Y
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 473 MVDLLGRAGWLDEAYELIINMPT---QPNADVWGALLLA-CRLHN---NVELGEIAVQHC 525
+VD + G + +A + ++M PN + +L+ A C++ N LG +Q
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ-- 430
Query: 526 IKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
+ +E + V Y +L+ + + R +A++L
Sbjct: 431 VGVEWNVVTYTALIDGL-CDAERMKEAEEL 459
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 132/292 (45%), Gaps = 23/292 (7%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
EA L+ +M G+ P + ++ + + ++ + + ++ G + + +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 147 DLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKD-- 200
+ + A+ V +EM E N + + +L+ Y K+G+ E HL D++ D
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 201 --VISWNSMISGYSKAGNMDQANSLFQKMP-----ERNLASWNTMIAGYIDSGSILSARE 253
V+++ +I G K + +A F ++ + N A + MI G + +A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 254 VFDAMPKRNSV----SLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYA 305
+F+ M ++ V + +++ G K G+V A L D+M E DLL+Y +++ +
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLS 694
Query: 306 QNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHI 357
++ ++A M+ +HPD++ SV+ +LG ++ ++S++
Sbjct: 695 HCNQLQKARSFLEEMIGE--GIHPDEVLCISVLKKHYELGCIDEAVELQSYL 744
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 179/383 (46%), Gaps = 35/383 (9%)
Query: 144 ALLDLYS------KMGDVGTARKVFDEMAE-------KNVVSWNSLLSGYLKAGDLDEAQ 190
+LD+YS + G K FD + E NVV + +L+ G K G++++A+
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 191 HLFDKIPGKDVI----SWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGY 242
LF ++ ++ ++ +I+G K G Q +++KM E NL ++N ++
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 243 IDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDL 294
G A +VFD M +R N V+ T+I G + ++ A+K+ DQM +L
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 295 LSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE 354
++YN +I + K +AL L + + P +T ++S + GD +
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDL--KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 355 SHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV----AYSAMIYGFGIN 410
+ + G+ T L+D +A+S +++KA +L + + LV YS +I+GF I
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 411 GRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHY 470
G+ ++A +LF+ M+ +N PN V Y ++ Y G M++ L P V Y
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASY 516
Query: 471 GIMVDLLGRAGWLDEAYELIINM 493
M+++L + EA L+ M
Sbjct: 517 RYMIEVLCKERKSKEAERLVEKM 539
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/433 (19%), Positives = 191/433 (44%), Gaps = 57/433 (13%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D +S+G +I+ + G+ ++ L +++ G P ++ + C + + +
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 128 GQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKA 183
++ LG T L++ K G +++++M E N+ ++N +++ K
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 184 GDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASW 235
G +A +FD++ + +++++N++I G + +++AN + +M NL ++
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRN-SVSLIT---MIAGYSKSGDVDSAHKLFDQMDE 291
NT+I G+ G + A + + R S SL+T +++G+ + GD A K+ +M+E
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+ + P K+T +I ++ ++E
Sbjct: 402 R---------------------------------GIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSAMIYGF 407
+ + + G+V D H + L+ + G +++A LF + +++ V Y+ MI G+
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV 467
G + A+KL ++M + + PN+ +Y ++ +E M D+G+ P
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Query: 468 DHYGIMVDLLGRA 480
++ L+ RA
Sbjct: 549 S----ILSLISRA 557
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 20/290 (6%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ +++ CV+ + G+ +A ++ +M+ G+ ++ + R +
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLK 182
Q+ G + + L+D + +G +G A + ++ + ++V++N L+SG+ +
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 183 AGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPERNLA----S 234
GD A + ++ + + +++ +I ++++ NM++A L M E L +
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKRN----SVSLITMIAGYSKSGDVDSAHKLFDQMD 290
++ +I G+ G + A +F +M ++N V TMI GY K G A KL +M+
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 291 EKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLAS 336
EK+L SY MI + K KEA L M+ I+ ++L S
Sbjct: 506 EKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 330 DKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELF 389
D + +I C + G++E + + +FG + + T L+D K G I+KA +LF
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 390 HGLRKRDLVA----YSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHA 445
+ K LVA Y+ +I G NG +++E+M + + PNL TY ++
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 446 GLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT---QPNADVW 502
G ++ + F+ M++ G+ + Y ++ L R L+EA +++ M + PN +
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 503 GALL 506
L+
Sbjct: 342 NTLI 345
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 238/511 (46%), Gaps = 44/511 (8%)
Query: 79 FSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTC 138
F + G ++ A+ ++ + G+ P+ + L S R ++ V G
Sbjct: 202 FKRDGCYL-ALDVFPVLANKGMFPSKTTCNILLTSLVR-ANEFQKCCEAFDVVCKGVSPD 259
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAGDLDEAQHLFD 194
VY+ T ++ + K G V A K+F +M E NVV++N+++ G G DEA +
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 195 KIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSG 246
K+ + +I+++ ++ G ++A + A + ++M ++ N+ +N +I +I++G
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 247 SILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM----DEKDLLSYN 298
S+ A E+ D M + S + T+I GY K+G D+A +L +M + S+
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE---S 355
++I + AL ML N+ P L ++IS + G +H + +E
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLR--NMSPGGGLLTTLISGLCKHG--KHSKALELWFQ 495
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGING 411
+N G V+D + AL+ ++G +D+A+ + + R D V+Y+ +I G
Sbjct: 496 FLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYG 471
+ +A ++M+ + P+ TY+ ++ + VEE ++ K NG++P V Y
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 472 IMVDLLGRAGWLDEAYELIINMPT---QPNADVWGALLLA-C---RLHNNVELGEIAVQH 524
+M+D +A +E E M + QPN V+ L+ A C RL +EL E
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
I S T Y SL+ + + + R ++AK L
Sbjct: 675 GISPNSAT--YTSLIKGM-SIISRVEEAKLL 702
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 216/506 (42%), Gaps = 70/506 (13%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCP---TSHAISSALKSCARIQDKLG 122
+PD + + I F + G+ EAV L+ +M+ G+ P T + + L C R +
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE--- 313
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLS 178
++ G + + + L+ ++ +G A V EM +K NV+ +N+L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 179 GYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPE----- 229
+++AG L++A + D + K + ++N++I GY K G D A L ++M
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 230 ------------------------------RNLAS----WNTMIAGYIDSGSILSAREV- 254
RN++ T+I+G G A E+
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 255 FDAMPKRNSVSLIT---MIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQN 307
F + K V T ++ G ++G +D A ++ ++ + D +SYN +I+
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
K EA + M+K + PD T + +I + +E G++ D +
Sbjct: 554 KKLDEAFMFLDEMVKR--GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSAMIYGFGINGRASDAIKLFEQM 423
+ ++D K+ ++ E F + +++ V Y+ +I + +GR S A++L E M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
+ I PN TYT ++ + VEE F M+ GL P V HY ++D G+ G +
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 484 DEAYELIINMPTQ---PNADVWGALL 506
+ L+ M ++ PN + ++
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMI 757
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 183/423 (43%), Gaps = 26/423 (6%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ + +I F + G +A+ + M GL TS ++ +K + +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVS----WNSLLSGYLK 182
++ +G++ T+++ L +A + EM +N+ +L+SG K
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 183 AGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLAS 234
G +A L+ + K D + N+++ G +AG +D+A + +++ R + S
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+NT+I+G + A D M KR ++ + +I G V+ A + +D
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 291 EK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
D+ +Y+ MI + + +E E F+ M+ NV P+ + +I A + G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSGR 660
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSA 402
L + + G+ + T+L+ + +++A LF +R L Y+A
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+I G+G G+ L +M +N+ PN +TYT ++ Y G V E N M++ G
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 463 LVP 465
+VP
Sbjct: 781 IVP 783
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 194/488 (39%), Gaps = 65/488 (13%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ ++ VI G++ EA +M G+ PT S +K R + +
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNSLLSGYLK 182
++ G+ V V L+D + + G + A ++ D M K + ++N+L+ GY K
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 183 AGDLDEAQHLFDKI-----------------------------------------PGKDV 201
G D A+ L ++ PG +
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGYIDSGSILSA----RE 253
++ ++ISG K G +A L+ + + + N ++ G ++G + A +E
Sbjct: 473 LT--TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 254 VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL----LSYNAMIACYAQNSK 309
+ + VS T+I+G +D A D+M ++ L +Y+ +I +K
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 310 PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA 369
+EA++ ++ + + PD T + +I C + E + + V + +
Sbjct: 591 VEEAIQFWDDCKRN--GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSAMIYGFGINGRASDAIKLFEQMLG 425
L+ Y +SG + A EL ++ + + Y+++I G I R +A LFE+M
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDE 485
E + PN+ YT ++ Y G + + M + P Y +M+ R G + E
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 486 AYELIINM 493
A L+ M
Sbjct: 769 ASRLLNEM 776
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 162 FDEMAEKNV----VSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSK 213
DEM ++ + +++ L+ G ++EA +D DV +++ MI G K
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 214 AGNMDQANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKR----NSVS 265
A ++ F +M +N+ +N +I Y SG + A E+ + M + NS +
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 266 LITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYML 321
++I G S V+ A LF++M E ++ Y A+I Y + + + L M
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 322 KPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGS 381
NVHP+K+T +I ++ G++ + + + + G+V D + Y K G
Sbjct: 743 SK--NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 382 IDKAYELFHGLRKRDLVAYSAMIYG 406
+ +A+ + D Y+A+I G
Sbjct: 801 VLEAF------KGSDEENYAAIIEG 819
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 238/511 (46%), Gaps = 44/511 (8%)
Query: 79 FSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTC 138
F + G ++ A+ ++ + G+ P+ + L S R ++ V G
Sbjct: 202 FKRDGCYL-ALDVFPVLANKGMFPSKTTCNILLTSLVR-ANEFQKCCEAFDVVCKGVSPD 259
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAGDLDEAQHLFD 194
VY+ T ++ + K G V A K+F +M E NVV++N+++ G G DEA +
Sbjct: 260 VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKE 319
Query: 195 KIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSG 246
K+ + +I+++ ++ G ++A + A + ++M ++ N+ +N +I +I++G
Sbjct: 320 KMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAG 379
Query: 247 SILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM----DEKDLLSYN 298
S+ A E+ D M + S + T+I GY K+G D+A +L +M + S+
Sbjct: 380 SLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIE---S 355
++I + AL ML N+ P L ++IS + G +H + +E
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLR--NMSPGGGLLTTLISGLCKHG--KHSKALELWFQ 495
Query: 356 HINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGING 411
+N G V+D + AL+ ++G +D+A+ + + R D V+Y+ +I G
Sbjct: 496 FLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 412 RASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYG 471
+ +A ++M+ + P+ TY+ ++ + VEE ++ K NG++P V Y
Sbjct: 555 KLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 472 IMVDLLGRAGWLDEAYELIINMPT---QPNADVWGALLLA-C---RLHNNVELGEIAVQH 524
+M+D +A +E E M + QPN V+ L+ A C RL +EL E
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKL 555
I S T Y SL+ + + + R ++AK L
Sbjct: 675 GISPNSAT--YTSLIKGM-SIISRVEEAKLL 702
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/506 (22%), Positives = 216/506 (42%), Gaps = 70/506 (13%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCP---TSHAISSALKSCARIQDKLG 122
+PD + + I F + G+ EAV L+ +M+ G+ P T + + L C R +
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE--- 313
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLS 178
++ G + + + L+ ++ +G A V EM +K NV+ +N+L+
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 179 GYLKAGDLDEAQHLFDKIPGKDV----ISWNSMISGYSKAGNMDQANSLFQKMPE----- 229
+++AG L++A + D + K + ++N++I GY K G D A L ++M
Sbjct: 374 SFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 230 ------------------------------RNLAS----WNTMIAGYIDSGSILSAREV- 254
RN++ T+I+G G A E+
Sbjct: 434 NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 255 FDAMPKRNSVSLIT---MIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQN 307
F + K V T ++ G ++G +D A ++ ++ + D +SYN +I+
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK 553
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
K EA + M+K + PD T + +I + +E G++ D +
Sbjct: 554 KKLDEAFMFLDEMVKR--GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 368 LATALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSAMIYGFGINGRASDAIKLFEQM 423
+ ++D K+ ++ E F + +++ V Y+ +I + +GR S A++L E M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
+ I PN TYT ++ + VEE F M+ GL P V HY ++D G+ G +
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 484 DEAYELIINMPTQ---PNADVWGALL 506
+ L+ M ++ PN + ++
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMI 757
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 183/423 (43%), Gaps = 26/423 (6%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ + +I F + G +A+ + M GL TS ++ +K + +
Sbjct: 363 PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERL 422
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVS----WNSLLSGYLK 182
++ +G++ T+++ L +A + EM +N+ +L+SG K
Sbjct: 423 LKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCK 482
Query: 183 AGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NLAS 234
G +A L+ + K D + N+++ G +AG +D+A + +++ R + S
Sbjct: 483 HGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+NT+I+G + A D M KR ++ + +I G V+ A + +D
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 291 EK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
D+ +Y+ MI + + +E E F+ M+ NV P+ + +I A + G
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK--NVQPNTVVYNHLIRAYCRSGR 660
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSA 402
L + + G+ + T+L+ + +++A LF +R L Y+A
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTA 720
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNG 462
+I G+G G+ L +M +N+ PN +TYT ++ Y G V E N M++ G
Sbjct: 721 LIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG 780
Query: 463 LVP 465
+VP
Sbjct: 781 IVP 783
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 194/488 (39%), Gaps = 65/488 (13%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
P+ ++ VI G++ EA +M G+ PT S +K R + +
Sbjct: 293 PNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFV 352
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVV----SWNSLLSGYLK 182
++ G+ V V L+D + + G + A ++ D M K + ++N+L+ GY K
Sbjct: 353 LKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 412
Query: 183 AGDLDEAQHLFDKI-----------------------------------------PGKDV 201
G D A+ L ++ PG +
Sbjct: 413 NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGYIDSGSILSA----RE 253
++ ++ISG K G +A L+ + + + N ++ G ++G + A +E
Sbjct: 473 LT--TLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 254 VFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDL----LSYNAMIACYAQNSK 309
+ + VS T+I+G +D A D+M ++ L +Y+ +I +K
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 310 PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA 369
+EA++ ++ + + PD T + +I C + E + + V + +
Sbjct: 591 VEEAIQFWDDCKRN--GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKRDL----VAYSAMIYGFGINGRASDAIKLFEQMLG 425
L+ Y +SG + A EL ++ + + Y+++I G I R +A LFE+M
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDE 485
E + PN+ YT ++ Y G + + M + P Y +M+ R G + E
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTE 768
Query: 486 AYELIINM 493
A L+ M
Sbjct: 769 ASRLLNEM 776
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 162 FDEMAEKNV----VSWNSLLSGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSK 213
DEM ++ + +++ L+ G ++EA +D DV +++ MI G K
Sbjct: 563 LDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCK 622
Query: 214 AGNMDQANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKR----NSVS 265
A ++ F +M +N+ +N +I Y SG + A E+ + M + NS +
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 266 LITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYML 321
++I G S V+ A LF++M E ++ Y A+I Y + + + L M
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 322 KPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGS 381
NVHP+K+T +I ++ G++ + + + + G+V D + Y K G
Sbjct: 743 SK--NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 382 IDKAYELFHGLRKRDLVAYSAMIYG 406
+ +A+ + D Y+A+I G
Sbjct: 801 VLEAF------KGSDEENYAAIIEG 819
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/478 (21%), Positives = 213/478 (44%), Gaps = 65/478 (13%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+P+S ++ +I +F + G+ +A+ Y +M+ +GL P+ + + ++ + Q +
Sbjct: 371 SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK 430
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYL 181
+ + G V+V +L K G A ++ +M + NVVS+N+++ G+
Sbjct: 431 LFDESFETGLAN-VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 182 KAGDLDEAQHLFDKIPGKDV---------------------------------------I 202
+ ++D A+ +F I K + +
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 203 SWNSMISGYSKAGNMDQANSLFQKMPER-----NLASWNTMIAGYIDSGSILSAREVFDA 257
+ ++I+G K G +A L M E + S+N++I G+ G + SA ++
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 258 MP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSK 309
M N ++ +++ G K+ +D A ++ D+M K D+ +Y A+I + + S
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 310 PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA 369
+ A LF+ +L+ +N P + S+IS LG++ + + G+ D
Sbjct: 670 MESASALFSELLEEGLN--PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSAMIYGFGINGRASDAIKLFEQMLG 425
T L+D K G++ A EL+ ++ LV Y+ ++ G G+ +K+FE+M
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
N+ PN++ Y ++ + G ++E + + M D G++P + I+V G+ G L
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS--GQVGNL 843
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/463 (22%), Positives = 215/463 (46%), Gaps = 37/463 (7%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIH 127
D+ + ++R ++ + EA+ + + G P S S A+++C + D S+
Sbjct: 232 DNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLL 291
Query: 128 GQVHVLGYDTCVYVQ---TALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGY 180
++ CV Q T+++ K G++ A ++ DEM NVV+ SL++G+
Sbjct: 292 REMK--EKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 181 LKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS-- 234
K DL A LFDK+ P + ++++ +I + K G M++A ++KM L
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 235 --WNTMIAGYIDSGSILSAREVFDAMPKRNSVSLI---TMIAGYSKSGDVDSAHKLFDQM 289
+T+I G++ A ++FD + ++ T+++ K G D A +L +M
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKM 469
Query: 290 DEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
+ + +++SYN ++ + + A +F+ +L E + P+ T + +I C +
Sbjct: 470 ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL--EKGLKPNNYTYSILIDGCFRNH 527
Query: 346 DLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGL--RKR---DLVAY 400
D ++ + +H+ + ++ + +++ K G KA EL + KR ++Y
Sbjct: 528 DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY 587
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+++I GF G A+ +E+M G I PN++TYT ++ +++ + MK+
Sbjct: 588 NSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 461 NGLVPLVDHYGIMVDLLGRAGWLDEAYELIINM------PTQP 497
G+ + YG ++D + ++ A L + P+QP
Sbjct: 648 KGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 11/241 (4%)
Query: 262 NSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLLSY----NAMIACYAQNSKPKEALELF 317
NS + ++ YSK D A + +QM E D++ + N ++ Q + EA EL+
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY 221
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYA 377
+ M+ I V D +T ++ A + + S + G D L + V
Sbjct: 222 SRMVA--IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 378 KSGSIDKAYELFHGLRKRDLV-----AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNL 432
K+ + A L ++++ L Y+++I G DAI+L ++ML + I N+
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 433 VTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIIN 492
V T ++T + + F+ M+ G P + ++++ + G +++A E
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKK 399
Query: 493 M 493
M
Sbjct: 400 M 400
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 48 NNYKPLSHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAI 107
+N + S +L NP + +I F G + A+ LY +M + GL
Sbjct: 668 SNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Query: 108 SSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE 167
++ + + + + ++ ++ +G + T +++ SK G K+F+EM +
Sbjct: 728 TTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 168 KNVVS----WNSLLSGYLKAGDLDEAQHLFDKIPGKDVI----SWNSMISGYSKAGNM 217
NV +N++++G+ + G+LDEA L D++ K ++ +++ ++SG + GN+
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG--QVGNL 843
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 185/366 (50%), Gaps = 26/366 (7%)
Query: 123 GVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLS 178
+SI G++ LGY+ +L++ + + V A + D+M E ++V++N+++
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 179 GYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER---- 230
K +++A F +I K +V+++ ++++G + A L M ++
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP 258
Query: 231 NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLF 286
N+ +++ ++ ++ +G +L A+E+F+ M + + V+ ++I G +D A+++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 287 DQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
D M K D++SYN +I + + + ++ ++LF M + + + +T ++I
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVSNTVTYNTLIQGFF 376
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLV 398
Q GD++ + S ++ FG+ D L+ +G ++KA +F ++KR D+V
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
Y+ +I G G+ +A LF + + + P++VTYT +++ GL+ E + M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 459 KDNGLV 464
K GL+
Sbjct: 497 KQEGLM 502
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 183/396 (46%), Gaps = 61/396 (15%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
+ PD + G ++ F ++ + +AVSL +M +G P A ++ + S + +
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGY 180
++ G V TAL++ A ++ +M +K NV+++++LL +
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 181 LKAGDLDEAQHLFDKIP----GKDVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
+K G + EA+ LF+++ D+++++S+I+G +D+AN +F M + ++
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
S+NT+I G+ + + ++F M +R N+V+ T+I G+ ++GDVD A + F Q
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 289 MD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
MD D+ +YN ++ N + ++AL +F M K E+++ D +T +VI
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL--DIVTYTTVIRG---- 444
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAY 400
K+G +++A+ LF L K D+V Y
Sbjct: 445 -------------------------------MCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYT 436
+ M+ G G + L+ +M E + N T +
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 170/373 (45%), Gaps = 43/373 (11%)
Query: 181 LKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKMP----ERNL 232
L+ L++A LF + P ++ +N ++S K D SL +KM +L
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITMIAGYSKSGDVDSAHKLFDQ 288
++N +I + + A + M K + V++ +++ G+ + V A L D+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 289 MDE----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M E D+++YNA+I + + +A + F + + + P+ +T ++++
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK--GIRPNVVTYTALVN----- 233
Query: 345 GDLEHWRWIESHINDFGVVLDDHLA----------TALVDLYAKSGSIDKAYELFHGLRK 394
G RW +D +L D + +AL+D + K+G + +A ELF + +
Sbjct: 234 GLCNSSRW-----SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 395 R----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEE 450
D+V YS++I G ++ R +A ++F+ M+ + ++V+Y ++ + A VE+
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVED 348
Query: 451 GYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP-TQPNADVWGALLLAC 509
G F M GLV Y ++ +AG +D+A E M + D+W +L
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 510 RLHNNVELGEIAV 522
L +N EL + V
Sbjct: 409 GLCDNGELEKALV 421
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 181/424 (42%), Gaps = 76/424 (17%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+A+ L+ M + P+ + L + +++ +S+ ++ VLG +Y ++
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 147 DLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP----G 198
+ + V A + +M E + V+ SL++G+ + + +A L DK+
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDSGSILSAREVFDAM 258
D++++N++I K ++ A F+++ + +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI-------------------------- 221
Query: 259 PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEAL 314
+ N V+ ++ G S A +L M +K ++++Y+A++ + +N K EA
Sbjct: 222 -RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 315 ELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHL--ATAL 372
ELF M++ +++ PD +T +S+I+ G+ L D + A +
Sbjct: 281 ELFEEMVR--MSIDPDIVTYSSLIN---------------------GLCLHDRIDEANQM 317
Query: 373 VDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNL 432
DL G + D+V+Y+ +I GF R D +KLF +M + N
Sbjct: 318 FDLMVSKGCL------------ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 433 VTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIIN 492
VTY ++ + AG V++ F+ M G+ P + Y I++ L G L++A + +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 493 MPTQ 496
M +
Sbjct: 426 MQKR 429
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 206/441 (46%), Gaps = 28/441 (6%)
Query: 72 WGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVH 131
+G +I Q A +L +M+ G+ + + + D+ G+ + ++
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 132 VLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLD 187
G+ V L++LY+K+G + A +V M E+ N+ +++ +++G++K D
Sbjct: 477 ECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWA 536
Query: 188 EAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPE-RNLASWNT---MI 239
A +F+ + + DVI +N++IS + GNMD+A ++M + R+ + T +I
Sbjct: 537 NAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 240 AGYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMD----E 291
GY SG + + EVFD M + V + +I G + ++ A ++ D+M
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 292 KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+ +Y ++ YA +A E F + ++V D T +++ AC + G ++
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV--DIFTYEALLKACCKSGRMQSAL 714
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGF 407
+ ++ + + + L+D +A+ G + +A +L ++K D+ Y++ I
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP-L 466
G + A + E+M + PN+ TYT ++ + A L E+ C+ MK G+ P
Sbjct: 775 SKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 467 VDHYGIMVDLLGRAGWLDEAY 487
++ ++ LL RA + EAY
Sbjct: 835 AVYHCLLTSLLSRAS-IAEAY 854
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/508 (20%), Positives = 208/508 (40%), Gaps = 64/508 (12%)
Query: 61 LHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDK 120
+ P +G +++F+ ++G A + +M+ G+ PTS +S + + A +D
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 121 LGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFD----------------- 163
+S ++ G + + + ++ +SK G A FD
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 164 ------------------EMAEKNVVS----WNSLLSGYLKAGDLDEAQHLFDKIP---- 197
EM E+ + + +++++ GY D + +F ++
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 198 GKDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSARE 253
V+++ +I+ Y+K G + +A + + M E NL +++ MI G++ +A
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 254 VFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYA 305
VF+ M K + + +I+ + G++D A + +M + ++ +I YA
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYA 600
Query: 306 QNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLD 365
++ + +LE+F+ M + P T +I+ + +E I + GV +
Sbjct: 601 KSGDMRRSLEVFDMMRR--CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 366 DHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFE 421
+H T ++ YA G KA+E F L+ D+ Y A++ +GR A+ + +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 422 QMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAG 481
+M NI N Y ++ + G V E MK G+ P + Y + +AG
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 482 WLDEAYELIINMPT---QPNADVWGALL 506
++ A + I M +PN + L+
Sbjct: 779 DMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 128/294 (43%), Gaps = 45/294 (15%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGV 124
H P + ++ +I +++ G ++ ++ M+R G PT H + + + V
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWNSLLSGYLKAG 184
I ++ + G + T ++ Y+ +GD G A + F + + +
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGL-------------- 690
Query: 185 DLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNLAS----WNTMIA 240
D+ D+ ++ +++ K+G M A ++ ++M RN+ +N +I
Sbjct: 691 DV-------------DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILID 737
Query: 241 GYIDSGSILSAREVFDAMPKRNSVSLI----TMIAGYSKSGDVDSAHKLFDQMD----EK 292
G+ G + A ++ M K I + I+ SK+GD++ A + ++M+ +
Sbjct: 738 GWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKP 797
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMT----LASVISACS 342
++ +Y +I +A+ S P++AL + M + + PDK L S++S S
Sbjct: 798 NIKTYTTLIKGWARASLPEKALSCYEEM--KAMGIKPDKAVYHCLLTSLLSRAS 849
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 144/349 (41%), Gaps = 31/349 (8%)
Query: 158 ARKVFDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNM 217
+RK + + N +W +++S F+KI + M+ Y + G+M
Sbjct: 279 SRKSLQRILDTNGDNWQAVISA-------------FEKISKPSRTEFGLMVKFYGRRGDM 325
Query: 218 DQANSLFQKMPERNLAS----WNTMIAGYIDSGSILSAREVFDAMPKRN-SVSLIT---M 269
+A F++M R + + ++I Y + A M + +SL+T +
Sbjct: 326 HRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVI 385
Query: 270 IAGYSKSGDVDSAHKLFDQMDE--KDLLS--YNAMIACYAQNSKPKEALELFNYMLKPEI 325
+ G+SK+G ++A FD+ K L + Y +I + Q + A L M E
Sbjct: 386 VGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREM--EEE 443
Query: 326 NVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
+ +++ + + D + + + + G L++LY K G I KA
Sbjct: 444 GIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKA 503
Query: 386 YELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
E+ ++ K +L YS MI GF ++A +FE M+ E + P+++ Y I++A
Sbjct: 504 LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISA 563
Query: 442 YNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI 490
+ G ++ M+ P + ++ ++G + + E+
Sbjct: 564 FCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVF 612
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/517 (20%), Positives = 225/517 (43%), Gaps = 66/517 (12%)
Query: 75 VIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLG 134
+IR + Q + EA + ++ G + A ++ + S RI ++ ++ G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 135 YDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQ 190
VY +++ K G + ++ EK ++V++N+L+S Y G ++EA
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 191 HLFDKIPGKD----VISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGY 242
L + +PGK V ++N++I+G K G ++A +F +M L+ ++ +++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 243 IDSGSILSAREVFDAMPKRNSV----SLITMIAGYSKSGDVDSAHKLFDQMDEK------ 292
G ++ +VF M R+ V +M++ +++SG++D A F+ + E
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 293 ---------------------------------DLLSYNAMIACYAQNSKPKEALELFNY 319
D+++YN ++ + EA +LFN
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 320 MLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
M E + PD TL +I +LG+L++ + + + + LD L+D + K
Sbjct: 471 M--TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 380 GSIDKAYELFHGLRKRDL----VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTY 435
G ID A E++ + +++ ++YS ++ G ++A +++++M+ +NI P ++
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 436 TGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPT 495
++ Y +G +G M G VP Y ++ R + +A+ L+ M
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 496 Q-----PNADVWGALLLACRLHNNVELGEIAVQHCIK 527
+ P+ + ++L N ++ E+ ++ I+
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIE 685
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/450 (22%), Positives = 201/450 (44%), Gaps = 30/450 (6%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD ++ +I +S KG EA L M G P + ++ + + +
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNSLLSGYLK 182
++ G +LL K GDV KVF +M ++V V ++S++S + +
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 183 AGDLDEAQHLFDKIPG----KDVISWNSMISGYSKAG----NMDQANSLFQKMPERNLAS 234
+G+LD+A F+ + D + + +I GY + G M+ N + Q+ ++ +
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 235 WNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD 290
+NT++ G + A ++F+ M +R +S +L +I G+ K G++ +A +LF +M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 291 EK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGD 346
EK D+++YN ++ + + A E++ M+ EI P ++ + +++A G
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI--LPTPISYSILVNALCSKGH 565
Query: 347 L-EHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYS 401
L E +R + I+ + + +++ Y +SG+ + D ++Y+
Sbjct: 566 LAEAFRVWDEMISK-NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 402 AMIYGFGINGRASDAIKLFEQMLGENIG--PNLVTYTGILTAYNHAGLVEEGYWCFNSMK 459
+IYGF S A L ++M E G P++ TY IL + ++E M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 460 DNGLVPLVDHYGIMVDLLGRAGWLDEAYEL 489
+ G+ P Y M++ L EA+ +
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 199/427 (46%), Gaps = 30/427 (7%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+P +++ VI + G++ A ++ +M R GL P S S L + D +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVS----WNSLLSGYL 181
+ + + ++++ L+++ G++ A F+ + E ++ + L+ GY
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNLA---- 233
+ G + A +L +++ + DV+++N+++ G K + +A+ LF +M ER L
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQM 289
+ +I G+ G++ +A E+F M ++ + V+ T++ G+ K GD+D+A +++ M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 290 DEKDLL----SYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLG 345
K++L SY+ ++ EA +++ M+ N+ P M S+I + G
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK--NIKPTVMICNSMIKGYCRSG 599
Query: 346 DLEHWR-WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR------DLV 398
+ ++E I++ G V D L+ + + ++ KA+ L + + D+
Sbjct: 600 NASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVF 658
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
Y+++++GF + +A + +M+ + P+ TYT ++ + + E + + M
Sbjct: 659 TYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Query: 459 KDNGLVP 465
G P
Sbjct: 719 LQRGFSP 725
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 148/370 (40%), Gaps = 63/370 (17%)
Query: 143 TALLDLYSKMGDVGTARKVFDEMAEKNVVSW----NSLLSGYLKAGDLDEAQHLFDKIPG 198
+A++ + + G + A+ M ++ VS NSL S + G D
Sbjct: 117 SAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV--------- 167
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPERNLA----SWNTMIAGYIDSGSILSAREV 254
++ +I Y +A + +A+ F + + + N +I + G + A V
Sbjct: 168 -----FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 255 FDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQ 306
+ + + N +L M+ K G ++ Q+ EK D+++YN +I+ Y+
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
+EA EL N M P P T +VI+ + G E + + + + G+ D
Sbjct: 283 KGLMEEAFELMNAM--PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGE 426
+L+ K G + + ++F +R RD+V
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVV---------------------------- 372
Query: 427 NIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA 486
P+LV ++ +++ + +G +++ FNS+K+ GL+P Y I++ R G + A
Sbjct: 373 ---PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 487 YELIINMPTQ 496
L M Q
Sbjct: 430 MNLRNEMLQQ 439
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 134/329 (40%), Gaps = 59/329 (17%)
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMI----AGYSKSGDVDSAHKLFDQM 289
S + MI + SG + A+ M +R+ VS + ++ + +S G DS
Sbjct: 115 SLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV------- 167
Query: 290 DEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL-GDLE 348
++ +I Y Q K +EA E F + V I AC+ L G L
Sbjct: 168 -------FDLLIRTYVQARKLREAHEAFTLLRSKGFTVS---------IDACNALIGSLV 211
Query: 349 HWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFG 408
W+E LA + ++SG Y L + M+
Sbjct: 212 RIGWVE-------------LAWGVYQEISRSGVGINVYTL------------NIMVNALC 246
Query: 409 INGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVD 468
+G+ Q+ + + P++VTY +++AY+ GL+EE + N+M G P V
Sbjct: 247 KDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY 306
Query: 469 HYGIMVDLLGRAGWLDEAYELIINM---PTQPNADVWGALLL-ACRLHNNVELGEI-AVQ 523
Y +++ L + G + A E+ M P++ + +LL+ AC+ + VE ++ +
Sbjct: 307 TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM 366
Query: 524 HCIKLESDTVGYYSLLSSIYANLGRWDDA 552
+ D V + S++ S++ G D A
Sbjct: 367 RSRDVVPDLVCFSSMM-SLFTRSGNLDKA 394
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/528 (22%), Positives = 218/528 (41%), Gaps = 95/528 (17%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
+P+ F + +I + +F EA L+ +M ++GL P S + R +S
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYL 181
G++ G VY +L++ + K GD+ A EM E VV++ SL+ GY
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 182 KAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPERNL----A 233
G +++A L+ ++ GK + ++ +++SG +AG + A LF +M E N+
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKRNSV----SLITMIAGYSKSGDVDSAHKLFDQM 289
++N MI GY + G + A E M ++ V S +I G +G A D +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 290 D----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINV------------------ 327
E + + Y ++ + + K +EAL + M++ +++
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 328 ---------------HPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATAL 372
PD + S+I A S+ GD + I + + G V ++ TA+
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 373 VDLYAKSGSID------------------------------------KAYELFHGLRK-- 394
++ K+G ++ KA EL + + K
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 395 -RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYW 453
+ Y+ +I GF GR +A +L +M+G+ + P+ +TYT ++ V++
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 454 CFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PN 498
+NSM + G+ P Y ++ AG + +A EL M Q PN
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 196/439 (44%), Gaps = 46/439 (10%)
Query: 75 VIRFFSQKGQFIEAVSLYVQM-QRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL 133
+I+ + + + ++ V ++ M ++ L P +S+ L + + + + + +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYLKAGDLDEA 189
G VY+ T ++ ++ D+ A+++ M + N+V +N L+ G K + EA
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 190 QHLFDKIPGKD----VISWNSMISGYSKAGNMDQANSLFQKMPERNLASWNTMIAGYIDS 245
+ + GKD V+++ +++ G K + + +M
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM------------------ 323
Query: 246 GSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMI 301
L R P +VS +++ G K G ++ A L ++ + +L YNA+I
Sbjct: 324 ---LCLR----FSPSEAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 302 ACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFG 361
+ K EA LF+ M K I + P+ +T + +I + G L+ + D G
Sbjct: 375 DSLCKGRKFHEAELLFDRMGK--IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 362 VVLDDHLATALVDLYAKSGSIDKA----YELFHGLRKRDLVAYSAMIYGFGINGRASDAI 417
+ L + +L++ + K G I A E+ + + +V Y++++ G+ G+ + A+
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 418 KLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLL 477
+L+ +M G+ I P++ T+T +L+ AGL+ + FN M + + P Y +M++
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGY 552
Query: 478 GRAGWLDEAYELIINMPTQ 496
G + +A+E + M +
Sbjct: 553 CEEGDMSKAFEFLKEMTEK 571
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 155/316 (49%), Gaps = 23/316 (7%)
Query: 198 GKDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILS--A 251
G V +N+M+ YS++G +A L M +R +L S+NT+I + SG + A
Sbjct: 222 GDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLA 281
Query: 252 REVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIAC 303
E+ D + + ++++ T+++ S+ ++D A K+F+ M+ + DL +YNAMI+
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISV 341
Query: 304 YAQNSKPKEALELFNYMLKPEIN-VHPDKMTLASVISACSQLGDLEHWRWIESHINDFGV 362
Y + EA LF ++ E+ PD +T S++ A ++ + E + + + G
Sbjct: 342 YGRCGLAAEAERLF---MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 363 VLDDHLATALVDLYAKSGSIDKAYELFHGL-----RKRDLVAYSAMIYGFGINGRASDAI 417
D+ ++ +Y K G +D A +L+ + R D + Y+ +I G R +A
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAA 458
Query: 418 KLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLL 477
L +ML I P L TY+ ++ Y AG EE F+ M +G P Y +M+D+L
Sbjct: 459 ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Query: 478 GRAGWLDEAYELIINM 493
R +A+ L +M
Sbjct: 519 LRGNETRKAWGLYRDM 534
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 167/360 (46%), Gaps = 28/360 (7%)
Query: 102 PTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKV 161
P + +++ L R + V I + D V V A++ +YS+ G A+++
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR-VQVYNAMMGVYSRSGKFSKAQEL 247
Query: 162 FDEMAEK----NVVSWNSLLSGYLKAGDLDE--AQHLFDKIPGK----DVISWNSMISGY 211
D M ++ +++S+N+L++ LK+G L A L D + D I++N+++S
Sbjct: 248 VDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSAC 307
Query: 212 SKAGNMDQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMPKR----NS 263
S+ N+D A +F+ M + +L ++N MI+ Y G A +F + + ++
Sbjct: 308 SRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDA 367
Query: 264 VSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYAQNSKPKEALELFNY 319
V+ +++ +++ + + +++ QM + KD ++YN +I Y + + AL+L+
Sbjct: 368 VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 320 MLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKS 379
M K +PD +T +I + + + S + D G+ +AL+ YAK+
Sbjct: 428 M-KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKA 486
Query: 380 GSIDKAYELFHGL----RKRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTY 435
G ++A + F + K D +AYS M+ A L+ M+ + P+ Y
Sbjct: 487 GKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/510 (20%), Positives = 208/510 (40%), Gaps = 47/510 (9%)
Query: 35 EPLFIHHILLWDVNNYKPL--SHYVHPILHNLHNPDSFSWGCVIRFFSQKGQFIEAVSLY 92
E L + H VNN ++ P +H S + ++ + EA ++
Sbjct: 648 EALIVLHC---KVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVF 704
Query: 93 VQMQRMGLCPTSHAISSALKSCARIQDKLG----GVSIHGQVHVLGYD-TCVYVQTALLD 147
+ R+ C S ++ KS + KLG + Q G+ C + T +++
Sbjct: 705 SDL-RLSGCEASESVC---KSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIE 760
Query: 148 LYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKI----PGK 199
Y K A V + + ++ +WNSL+S Y + G + A+ +F+ + P
Sbjct: 761 AYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSP 820
Query: 200 DVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMIAGYIDSGSILSAREVF 255
V S N ++ G +++ + +++ + +S M+ + +G+I ++++
Sbjct: 821 TVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIY 880
Query: 256 DAMPKRNSVSLIT----MIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQN 307
+M + I MI K V A + +M+E +L +N+M+ Y
Sbjct: 881 SSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAI 940
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
K+ ++++ + E + PD+ T ++I + E + + + G LD
Sbjct: 941 EDYKKTVQVYQRI--KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG--LDPK 996
Query: 368 LAT--ALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFE 421
L T +L+ + K +++A +LF L K D Y M+ +G S A KL +
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 422 QMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAG 481
M I P L T ++ +Y+ +G +E +++KD + Y ++D R+
Sbjct: 1057 MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSK 1116
Query: 482 WLDEAYELIINMPT---QPNADVWGALLLA 508
+ E ++ M +P+ +W + A
Sbjct: 1117 DYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/460 (19%), Positives = 183/460 (39%), Gaps = 52/460 (11%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRM-GLCPTSHAISSALKSCARIQDKLGGVSI 126
D ++ +I + ++GQ A+ LY M+ + G P + + + S + + ++
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 127 HGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEM----AEKNVVSWNSLLSGYLK 182
++ +G + +AL+ Y+K G A F M + + ++++ +L L+
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 183 AGDLDEAQHLFDKIPGKDVIS---------WNSMISGYSKAGNMDQANSLFQKMPERNLA 233
+ +A L+ +D+IS + MI G K D + M E L
Sbjct: 521 GNETRKAWGLY-----RDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE--LC 573
Query: 234 SWNTMIAGYIDSGSILSAREVFDAMPKRNSV-----------SLITMIAGYSKSGDVDSA 282
N + + S+L E FD ++ V +L++++ YS SG A
Sbjct: 574 GMNPL-----EISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEA 628
Query: 283 HKLFDQMDE-----KDLLSYNAMIACYAQNSKPKEALELFNYMLKPEIN--VHPDKMTLA 335
+L + + E K L++ A+I + + + AL+ Y P ++
Sbjct: 629 FELLEFLKEHASGSKRLIT-EALIVLHCKVNNLSAALD--EYFADPCVHGWCFGSSTMYE 685
Query: 336 SVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR 395
+++ C + S + G + + ++V +Y K G + A+++ + +
Sbjct: 686 TLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETK 745
Query: 396 DL-----VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEE 450
Y+ +I +G A + + P+L T+ +++AY G E
Sbjct: 746 GFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYER 805
Query: 451 GYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI 490
FN+M +G P V+ I++ L G L+E Y ++
Sbjct: 806 ARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 845
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 80/171 (46%), Gaps = 9/171 (5%)
Query: 66 NPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
PD +++ +I + + G EA L+++++ G P + +S L + AR ++
Sbjct: 329 QPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKE 388
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA-----EKNVVSWNSLLSGY 180
++ Q+ +G+ ++ +Y K G + A +++ +M + +++ L+
Sbjct: 389 VYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL 448
Query: 181 LKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNMDQANSLFQKM 227
KA EA L ++ + +++++I GY+KAG ++A F M
Sbjct: 449 GKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM 499
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 193/424 (45%), Gaps = 67/424 (15%)
Query: 68 DSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCA---RIQDKLGGV 124
D +S+ +I F + + A+S+ +M ++G P+ S L RI D V
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 125 SIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGY 180
+ + GY+ V V L+D K G++ A ++ +EM +K +VV++N+LL+G
Sbjct: 165 ILMVKS---GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 181 LKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER----NL 232
+G +A + + + DV+++ ++I + K GN+D+A L+++M + N
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 233 ASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQ 288
++N++I G G + A++ FD M + N V+ T+I+G+ K VD KLF +
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 289 MD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQL 344
M D+ +YN +I Y Q K + AL++F +M+ + PD +I+ C L
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT--PD------IITHCILL 393
Query: 345 GDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRD----LVAY 400
L +G I+ A F +R+ + +VAY
Sbjct: 394 HGL-----------------------------CVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 401 SAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKD 460
+ MI+G + A +LF ++ E + P+ TYT ++ G E MK+
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 461 NGLV 464
G++
Sbjct: 485 EGII 488
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 185/431 (42%), Gaps = 70/431 (16%)
Query: 96 QRMGLCPTSHAISS------ALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLY 149
Q+M L SH + S C+R+ L S+ G++ LGY+ + +LL +
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFAL---SVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 150 SKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIP----GKDV 201
+ +G A + M E NVV +N+L+ G K G+L+ A L +++ G DV
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 202 ISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMIAGYIDSGSILSAREVFDA 257
+++N++++G +G A + + M +R++ ++ +I ++ G++ A+E++
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 258 MPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSK 309
M + N+V+ ++I G G + A K FD M K ++++YN +I+ + +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 310 PKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLA 369
E ++LF M +C G D
Sbjct: 332 VDEGMKLFQRM-------------------SCE------------------GFNADIFTY 354
Query: 370 TALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLG 425
L+ Y + G + A ++F + R D++ + +++G +NG A+ F+ M
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 426 ENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDE 485
+V Y ++ A VE+ + F + G+ P Y IM+ L + G E
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474
Query: 486 AYELIINMPTQ 496
A ELI M +
Sbjct: 475 ADELIRRMKEE 485
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/473 (21%), Positives = 201/473 (42%), Gaps = 59/473 (12%)
Query: 66 NPDSFSWGCVIRFFSQKGQ-----------FIEAVSLYVQMQRMGLCPTSHAISSALKSC 114
NP+ G R FS + F +A +L+ +M P+ + L +
Sbjct: 22 NPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTAT 81
Query: 115 ARIQDKLGGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNV 170
A ++ + ++ + G +Y T L+ + + + A V +M E ++
Sbjct: 82 ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI 141
Query: 171 VSWNSLLSGYLKAGDLDEAQHLFDKIPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER 230
V++ SLL G+ + +A L VI + SGY E
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSL--------VILM--VKSGY-----------------EP 174
Query: 231 NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGD-VDSAHKL 285
N+ +NT+I G +G + A E+ + M K+ + V+ T++ G SG D+A L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 286 FDQMDEK---DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACS 342
D M D++++ A+I + + EA EL+ M++ ++ P+ +T S+I+
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD--PNNVTYNSIINGLC 292
Query: 343 QLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLV 398
G L + + G + L+ + K +D+ +LF + D+
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 399 AYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSM 458
Y+ +I+G+ G+ A+ +F M+ + P+++T+ +L G +E F+ M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 459 KDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQ---PNADVWGALLLA 508
+++ + Y IM+ L +A +++A+EL +P + P+A + ++L
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 47/281 (16%)
Query: 293 DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRW 352
DL S+ +I C+ + S+ AL + M+K + P +T G L H
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMK--LGYEPSIVTF----------GSLLHGFC 152
Query: 353 IESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVAYSAMIYGFGINGR 412
+ + I D A +LV L KSG YE ++V Y+ +I G NG
Sbjct: 153 LVNRIGD---------AFSLVILMVKSG-----YE-------PNVVVYNTLIDGLCKNGE 191
Query: 413 ASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGI 472
+ A++L +M + +G ++VTY +LT ++G + M + P V +
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 473 MVDLLGRAGWLDEAYEL---IINMPTQPNADVWGALLLACRLHNNV-----ELGEIAVQH 524
++D+ + G LDEA EL +I PN + +++ +H + +A +
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 525 CIKLESDTVGYYSLLSSIYANLGRWDDAKKL--RMGVKGKN 563
C + V Y +L+S + D+ KL RM +G N
Sbjct: 312 CF---PNVVTYNTLISG-FCKFRMVDEGMKLFQRMSCEGFN 348
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/512 (21%), Positives = 229/512 (44%), Gaps = 39/512 (7%)
Query: 6 LTTLMKKCSTLNHAKQIHAHILINGLHHLEPLFIHHILLWDV--NNYKPLS--HYVHPIL 61
L T K+ S A Q+ + G + + + + L DV +++P ++ ++
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDK---VTYNALLDVYGKSHRPKEAMKVLNEMV 341
Query: 62 HNLHNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKL 121
N +P ++ +I +++ G EA+ L QM G P ++ L R
Sbjct: 342 LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLL 177
+SI ++ G + A + +Y G K+FDE+ ++V+WN+LL
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 178 SGYLKAGDLDEAQHLFDK------IPGKDVISWNSMISGYSKAGNMDQANSLFQKMPER- 230
+ + + G E +F + +P ++ ++N++IS YS+ G+ +QA +++++M +
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 231 ---NLASWNTMIAGYIDSGSILSAREVF----DAMPKRNSVSLITMIAGYSKSGDVDSAH 283
+L+++NT++A G + +V D K N ++ +++ Y+ ++ H
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 284 KLFDQ-----MDEKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVI 338
L ++ ++ + +L ++ C + P EA F+ + E PD TL S++
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP-EAERAFSEL--KERGFSPDITTLNSMV 636
Query: 339 SACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----K 394
S + + + ++ + G +L+ ++++S K+ E+ + K
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 395 RDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWC 454
D+++Y+ +IY + N R DA ++F +M I P+++TY + +Y + EE
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGV 756
Query: 455 FNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA 486
M +G P + Y +VD + DEA
Sbjct: 757 VRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/551 (20%), Positives = 231/551 (41%), Gaps = 105/551 (19%)
Query: 67 PDSFSWGCVIRFFSQKGQ-FIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVS 125
P ++ ++ F + G + + SL +M+ G+ P ++ ++ + C R
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 126 IHGQVHVLG--YDTCVYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSG 179
+ ++ G YD Y ALLD+Y K A KV +EM ++V++NSL+S
Sbjct: 301 VFEEMKAAGFSYDKVTY--NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 180 YLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMP----ERN 231
Y + G LDEA L +++ K DV ++ +++SG+ +AG ++ A S+F++M + N
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 232 LASWNTMIAGYIDSGSILSAREVFDAM--------------------------------- 258
+ ++N I Y + G ++FD +
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 259 --------PKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYAQ 306
P+R + + T+I+ YS+ G + A ++ +M + DL +YN ++A A+
Sbjct: 479 EMKRAGFVPERETFN--TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR 536
Query: 307 -----------------NSKPKEALE---LFNYMLKPEIN-------------VHPDKMT 333
KP E L Y EI + P +
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 334 LASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR 393
L +++ CS+ L S + + G D ++V +Y + + KA + ++
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 394 KR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVE 449
+R + Y++++Y + + ++ ++L + I P++++Y ++ AY +
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 450 EGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELI---INMPTQPNADVWGALL 506
+ F+ M+++G+VP V Y + +EA ++ I +PN + + +++
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 507 LA-CRLHNNVE 516
C+L+ E
Sbjct: 777 DGYCKLNRKDE 787
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 189/417 (45%), Gaps = 35/417 (8%)
Query: 141 VQTALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKI 196
V ++ + K G V +A +F+ + E +V S+ SL+S + +G EA ++F K+
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 197 P----GKDVISWNSMISGYSKAGNM-DQANSLFQKMPERNLA----SWNTMIAGYIDSGS 247
+I++N +++ + K G ++ SL +KM +A ++NT+I
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSL 294
Query: 248 ILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNA 299
A +VF+ M + V+ ++ Y KS A K+ ++M +++YN+
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 300 MIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIND 359
+I+ YA++ EA+EL N M E PD T +++S + G +E I + +
Sbjct: 355 LISAYARDGMLDEAMELKNQMA--EKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 360 FGVVLDDHLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIYGFGINGRASD 415
G + A + +Y G + ++F + D+V ++ ++ FG NG S+
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 416 AIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVD 475
+F++M P T+ +++AY+ G E+ + M D G+ P + Y ++
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
Query: 476 LLGRAGWLDEAYELIINMP---TQPNADVWGALLLACRLHNNVELGEIAVQHCIKLE 529
L R G +++ +++ M +PN + +L LH EI + H + E
Sbjct: 533 ALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL-----LHAYANGKEIGLMHSLAEE 584
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 127/260 (48%), Gaps = 21/260 (8%)
Query: 262 NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQNSKPKEALELF 317
NSV I +I+ K G V SA +F+ + E D+ SY ++I+ +A + + +EA+ +F
Sbjct: 173 NSVVAI-IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 318 NYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDF---GVVLDDHLATALVD 374
M E P +T +++ ++G W I S + G+ D + L+
Sbjct: 232 KKM--EEDGCKPTLITYNVILNVFGKMGT--PWNKITSLVEKMKSDGIAPDAYTYNTLIT 287
Query: 375 LYAKSGSI-DKAYELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIG 429
K GS+ +A ++F ++ D V Y+A++ +G + R +A+K+ +M+
Sbjct: 288 C-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 430 PNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEA--- 486
P++VTY +++AY G+++E N M + G P V Y ++ RAG ++ A
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 487 YELIINMPTQPNADVWGALL 506
+E + N +PN + A +
Sbjct: 407 FEEMRNAGCKPNICTFNAFI 426
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 347 LEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSA 402
L + W D+ +LD+ + ++ + K G + A +F+GL++ D+ +Y++
Sbjct: 155 LRAFDWFMKQ-KDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTS 213
Query: 403 MIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAG--------LVEEGYWC 454
+I F +GR +A+ +F++M + P L+TY IL + G LVE+
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK---- 269
Query: 455 FNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQP---NADVWGALL-LACR 510
MK +G+ P Y ++ R EA ++ M + + ALL + +
Sbjct: 270 ---MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 511 LHNNVELGEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDDAKKLR--MGVKG 561
H E ++ + + S ++ Y+ L S YA G D+A +L+ M KG
Sbjct: 327 SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/449 (22%), Positives = 211/449 (46%), Gaps = 33/449 (7%)
Query: 77 RFFS---QKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVL 133
R FS + Q+ ++L QM+ G+ + + +S + R + S G++ L
Sbjct: 93 RLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKL 152
Query: 134 GYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAE----KNVVSWNSLLSGYLKAGDLDEA 189
GY+ + LL+ V A ++ D M E +++ N+L++G G + +A
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 190 QHLFDKI------PGKDVISWNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTMI 239
L D++ P + +++ +++ K+G A L +KM ERN+ ++ +I
Sbjct: 213 VVLIDRMVETGFQPNE--VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 240 AGYIDSGSILSAREVFDAMP----KRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEK--- 292
G GS+ +A +F+ M K + ++ T+I G+ +G D KL M ++
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 293 -DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
++++++ +I + + K +EA +L M++ + P+ +T S+I + LE
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLVA----YSAMIYGF 407
+ + G D L++ Y K+ ID ELF + R ++A Y+ ++ GF
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 408 GINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLV 467
+G+ A KLF++M+ + P++V+Y +L G +E+ F ++ + + +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 468 DHYGIMVDLLGRAGWLDEAYELIINMPTQ 496
Y I++ + A +D+A++L ++P +
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 207/462 (44%), Gaps = 67/462 (14%)
Query: 65 HNPDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKS-C--ARIQDKL 121
+ PD+ + ++ + + EA+ L +M MG PT +++ + C ++ D +
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 122 GGVSIHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----VSWNSLL 177
V I V G+ +L++ K G A ++ +M E+N+ V ++ ++
Sbjct: 214 --VLIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 178 SGYLKAGDLDEAQHLFDKIPGK----DVISWNSMISGYSKAGNMDQANSLFQKMPER--- 230
G K G LD A +LF+++ K D+I++N++I G+ AG D L + M +R
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 231 -NLASWNTMIAGYIDSGSILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKL 285
N+ +++ +I ++ G + A ++ M +R N+++ ++I G+ K ++ A ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 286 FDQMDEK----DLLSYNAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISAC 341
D M K D++++N +I Y + ++ + LELF +M+L
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR------------EMSLR------ 432
Query: 342 SQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DL 397
GV+ + LV + +SG ++ A +LF + R D+
Sbjct: 433 -------------------GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 398 VAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNS 457
V+Y ++ G NG A+++F ++ + ++ Y I+ +A V++ + F S
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 458 MKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMPTQPNA 499
+ G+ Y IM+ L R L +A L M + +A
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 192/424 (45%), Gaps = 39/424 (9%)
Query: 162 FDEMAEKNVVSWNSLLSGY--LKAGD-LDEAQHLFDKIPGKDVISWNSMISGYSKAGNMD 218
F +++N+ + L SG +KA D +D + + P VI +N + S +K +
Sbjct: 46 FSTFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYE 105
Query: 219 QANSLFQKMPERNLA----SWNTMIAGYIDSGSILSAREVFDAMPK-------RNSVSLI 267
+L ++M + +A + + MI + + A F M K ++V
Sbjct: 106 LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA---FSTMGKIMKLGYEPDTVIFN 162
Query: 268 TMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIACYAQNSKPKEALELFNYMLKP 323
T++ G V A +L D+M E L++ N ++ N K +A+ L + M+
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV-- 220
Query: 324 EINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSID 383
E P+++T V++ + G + + + + LD + ++D K GS+D
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLD 280
Query: 384 KAYELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGIL 439
A+ LF+ + K D++ Y+ +I GF GR D KL M+ I PN+VT++ ++
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 440 TAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYE---LIINMPTQ 496
++ G + E M G+ P Y ++D + L+EA + L+I+
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 497 PNADVWGALL----LACRLHNNVEL-GEIAVQHCIKLESDTVGYYSLLSSIYANLGRWDD 551
P+ + L+ A R+ + +EL E++++ I ++TV Y +L+ + G+ +
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVI---ANTVTYNTLVQG-FCQSGKLEV 456
Query: 552 AKKL 555
AKKL
Sbjct: 457 AKKL 460
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 203/431 (47%), Gaps = 26/431 (6%)
Query: 87 EAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQVHVLGYDTCVYVQTALL 146
+++ L+ M + P+ S L + ++++ + + Q+ +LG + LL
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 147 DLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFDKIPG---- 198
+ + + + A +M E ++V++ SLL+G+ + + +A ++FD++ G
Sbjct: 124 NCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK 183
Query: 199 KDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREV 254
+V+ +N++I G K+ +D A L +M + ++ ++N++I+G SG A +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 255 FDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYNAMIACYAQ 306
M KR + + +I K G V A + +++M + D+++Y+ +I
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 307 NSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDD 366
S+ EA E+F +M+ PD +T + +I+ + +EH + ++ GVV +
Sbjct: 304 YSRLDEAEEMFGFMVSK--GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 367 HLATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFEQ 422
T L+ Y ++G ++ A E+F + +++ Y+ +++G NG+ A+ +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 423 MLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGW 482
M + ++VTY I+ AG V + + + S+ GL+P + Y M+ L + G
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGL 481
Query: 483 LDEAYELIINM 493
EA L M
Sbjct: 482 RREADALFRKM 492
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 194/411 (47%), Gaps = 28/411 (6%)
Query: 80 SQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSC-ARIQDKLGGVSIHGQVHVLGYDTC 138
S+ ++ + L+ QMQ +G+ P + + L +C R +S G++ LG++
Sbjct: 92 SKMKKYDVVIYLWEQMQMLGI-PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPS 150
Query: 139 VYVQTALLDLYSKMGDVGTARKVFDEMA----EKNVVSWNSLLSGYLKAGDLDEAQHLFD 194
+ +LL+ + + V A +FD+M + NVV +N+++ G K+ +D A L +
Sbjct: 151 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 195 KIP----GKDVISWNSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSG 246
++ G DV+++NS+ISG +G A + M +R ++ ++N +I + G
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 247 SILSAREVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDEK----DLLSYN 298
+ A E ++ M +R + V+ +I G +D A ++F M K D+++Y+
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 299 AMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHIN 358
+I Y ++ K + ++LF M + V + +T +I + G L I +
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEM--SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 359 DFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKR----DLVAYSAMIYGFGINGRAS 414
GV + L+ +G I+KA + ++K D+V Y+ +I G G +
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 415 DAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVP 465
DA ++ + + + P++ TYT ++ GL E F MK++G++P
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 160/368 (43%), Gaps = 25/368 (6%)
Query: 162 FDEMAEKNVVSWNSLLSGYLKAGDLDEAQHLFDKI----PGKDVISWNSMISGYSKAGNM 217
F A N + +L ++ LD++ LF + P + ++ ++S SK
Sbjct: 38 FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 218 DQANSLFQKMP----ERNLASWNTMIAGYIDSGSILSAREVFDAMPK----RNSVSLITM 269
D L+++M NL + N ++ + + A M K + V+ ++
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 270 IAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPKEALELFNYMLKPEI 325
+ G+ + V A +FDQM + +++ YN +I ++ + AL+L N M K I
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 326 NVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATALVDLYAKSGSIDKA 385
PD +T S+IS G + S + + D AL+D K G + +A
Sbjct: 218 G--PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 386 YELFHGLRKR----DLVAYSAMIYGFGINGRASDAIKLFEQMLGENIGPNLVTYTGILTA 441
E + + +R D+V YS +IYG + R +A ++F M+ + P++VTY+ ++
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 442 YNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWLDEAYELIINMP---TQPN 498
Y + VE G F M G+V Y I++ RAG L+ A E+ M PN
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 499 ADVWGALL 506
+ LL
Sbjct: 396 IITYNVLL 403
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 209/457 (45%), Gaps = 61/457 (13%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSI 126
PD + ++ +F + + +A+ Y++M+ + + P+S + + ++ C + + + I
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 127 ----------HG----QVHVL--------------------GYDTCVYVQTALLDLYSKM 152
HG ++ +L G + V ++ + +M
Sbjct: 438 FNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM 497
Query: 153 GDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLDEAQHLFDKIPGKDV----ISW 204
++ AR +F EM EK N +++ L+ G+ K D A + +++ + + +
Sbjct: 498 KNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIY 557
Query: 205 NSMISGYSKAGNMDQANSLFQKMPER-----NLASWNTMIAGYIDSGSILSAREVFDAMP 259
N++I+G K G +A + Q + + + S+N++I G++ G SA E + M
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 260 KR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQNSKPK 311
+ N V+ ++I G+ KS +D A ++ +M + DL +Y A+I + + + K
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK 677
Query: 312 EALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDHLATA 371
A LF+ + PE+ + P+ S+IS LG ++ + + + G+ D T
Sbjct: 678 TAYTLFSEL--PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 372 LVDLYAKSGSIDKAYELFHGLRK----RDLVAYSAMIYGFGINGRASDAIKLFEQMLGEN 427
++D K G+I+ A +L+ L D + + ++ G G+ A K+ E+M ++
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 428 IGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLV 464
+ PN++ Y+ ++ ++ G + E + + M + G+V
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/486 (19%), Positives = 205/486 (42%), Gaps = 68/486 (13%)
Query: 67 PDSFSWGCVIRFFSQKGQFIEAVSLYVQMQ-RMGLCPTSHAISSALKSCARIQDKLGGVS 125
PD + ++ + + A+ L +M+ ++G+ + +S + + + + V
Sbjct: 272 PDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVR 331
Query: 126 IHGQVHVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNV----------VSW-- 173
+ ++ G V T+L++ Y K ++G A +F+ M E+ + V W
Sbjct: 332 VMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFC 391
Query: 174 ---------------------------NSLLSGYLKAGDLDEAQHLFDKIPGKDVISW-- 204
++++ G LKA + A +F+ SW
Sbjct: 392 KNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND----SFESWIA 447
Query: 205 -----NSMISGYSKAGNMDQANSLFQKMPER----NLASWNTMIAGYIDSGSILSAREVF 255
N + + K G +D A S + M ++ N+ +N M+ + ++ AR +F
Sbjct: 448 HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIF 507
Query: 256 DAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMD----EKDLLSYNAMIACYAQN 307
M ++ N+ + +I G+ K+ D +A + +QM+ E + + YN +I +
Sbjct: 508 SEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKV 567
Query: 308 SKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVVLDDH 367
+ +A E+ ++K E + S+I ++GD + +++ G +
Sbjct: 568 GQTSKAKEMLQNLIK-EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 368 LATALVDLYAKSGSIDKAYELFHGLR----KRDLVAYSAMIYGFGINGRASDAIKLFEQM 423
T+L++ + KS +D A E+ H ++ K DL AY A+I GF A LF ++
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 424 LGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPLVDHYGIMVDLLGRAGWL 483
+ PN+ Y +++ + + G ++ + M ++G+ + Y M+D L + G +
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNI 746
Query: 484 DEAYEL 489
+ A +L
Sbjct: 747 NLASDL 752
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 137/261 (52%), Gaps = 27/261 (10%)
Query: 144 ALLDLYSKMGDVGTARKVFDEMAEK----NVVSWNSLLSGYLKAGDLD---EAQHLFDKI 196
+++D + K+GD +A + + EM+E NVV++ SL++G+ K+ +D E H +
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 197 PGK-DVISWNSMISGYSKAGNMDQANSLFQKMPE----RNLASWNTMIAGYIDSGSILSA 251
K D+ ++ ++I G+ K +M A +LF ++PE N++ +N++I+G+ + G + +A
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 252 REVFDAMPKR----NSVSLITMIAGYSKSGDVDSAHKLFDQMDE----KDLLSYNAMIAC 303
+++ M + + TMI G K G+++ A L+ ++ + D + + ++
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNG 774
Query: 304 YAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWRWIESHINDFGVV 363
++ + +A ++ M K + V P+ + ++VI+ + G+L + + + G+V
Sbjct: 775 LSKKGQFLKASKMLEEMKKKD--VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Query: 364 LDDHLATALVDLYAKSGSIDK 384
DD + LV SG ++K
Sbjct: 833 HDDTVFNLLV-----SGRVEK 848
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 130/304 (42%), Gaps = 32/304 (10%)
Query: 236 NTMIAGYIDSGSILSAREVFDAMPKRNSVSLITMIAGYSKSGDVDSAHKLFDQMDEKDLL 295
N M+ +DS S R F+ P+ + ++ Y ++ +D A F M ++ ++
Sbjct: 150 NVMVNNLVDS----SKRFGFELTPR----AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVV 201
Query: 296 SY----NAMIACYAQNSKPKEALELFNYMLKPEINVHPDKMTLASVISACSQLGDLEHWR 351
+ N +++ +++ EA E++N M+ I V D +T ++ A + E
Sbjct: 202 PFVPYVNNVLSSLVRSNLIDEAKEIYNKMVL--IGVAGDNVTTQLLMRASLRERKPEEAV 259
Query: 352 WIESHINDFGVVLDDHLATALVDLYAKSGSIDKAYELFHGLRKRDLV-----AYSAMIYG 406
I + G D L + V K+ + A +L +R + V Y+++I
Sbjct: 260 KIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVA 319
Query: 407 FGINGRASDAIKLFEQMLGENIGPNLVTYTGILTAYNHAGLVEEGYWCFNSMKDNGLVPL 466
F G +A+++ ++M+G I +++ T ++ Y + + FN M++ GL P
Sbjct: 320 FVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPD 379
Query: 467 VDHYGIMVDLLGRAGWLDEAYELIINMPTQPNADVWGALLLACRLHNNVELGEIAVQHCI 526
+ +MV+ + +++A E + M + R+ + L +Q C+
Sbjct: 380 KVMFSVMVEWFCKNMEMEKAIEFYMRMKS-------------VRIAPSSVLVHTMIQGCL 426
Query: 527 KLES 530
K ES
Sbjct: 427 KAES 430
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
Query: 71 SWGCVIRFFSQKGQFIEAVSLYVQMQRMGLCPTSHAISSALKSCARIQDKLGGVSIHGQV 130
++G +I F +K A +L+ ++ +GL P +S + + + ++ ++
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 131 HVLGYDTCVYVQTALLDLYSKMGDVGTARKVFDEMAEKNVVSWN----SLLSGYLKAGDL 186
G ++ T ++D K G++ A ++ E+ + +V L++G K G
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 187 DEAQHLFDKIPGKDVIS----WNSMISGYSKAGNMDQANSLFQKMPERNL----ASWNTM 238
+A + +++ KDV ++++I+G+ + GN+++A L +M E+ + +N +
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL 841
Query: 239 IAGYID 244
++G ++
Sbjct: 842 VSGRVE 847