Miyakogusa Predicted Gene
- Lj4g3v2369420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2369420.1 Non Chatacterized Hit- tr|I1HE35|I1HE35_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,44.53,4e-16,zf-CCCH,Zinc finger, CCCH-type; CCCH zinc finger,NULL;
zinc finger,Zinc finger, CCCH-type; seg,NULL;,CUFF.50833.1
(489 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18550.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 405 e-113
AT3G06410.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 389 e-108
AT2G47850.3 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 379 e-105
AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 379 e-105
AT3G02830.1 | Symbols: ZFN1 | zinc finger protein 1 | chr3:61407... 279 4e-75
AT2G47850.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 265 6e-71
AT5G16540.1 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 262 4e-70
AT5G16540.3 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 260 1e-69
AT5G16540.2 | Symbols: ZFN3 | zinc finger nuclease 3 | chr5:5403... 241 7e-64
AT1G04990.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 211 1e-54
AT1G04990.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 211 1e-54
AT3G48440.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 190 2e-48
AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) | c... 134 1e-31
AT5G63260.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 132 8e-31
AT5G63260.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 125 7e-29
AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 91 2e-18
AT2G32930.1 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:1396... 78 1e-14
AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 | chr2:1396... 78 1e-14
AT1G29600.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 56 7e-08
AT1G29570.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type fami... 49 9e-06
>AT5G18550.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:6160515-6162729 FORWARD LENGTH=465
Length = 465
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 238/444 (53%), Positives = 288/444 (64%), Gaps = 36/444 (8%)
Query: 1 MDRYGGS---QSQSDPSPEWPLAAGETALEEPVWQLGLSGGG---ESYPLRPDEADCIYY 54
M+RYGG+ +S+SDPS EW ET +E +W+LGL GGG E++P RPDE DCIYY
Sbjct: 1 MERYGGAGEDESRSDPSHEWSAQGTETGIEASMWRLGLRGGGGGGETFPERPDEPDCIYY 60
Query: 55 LRTGYCGYGSRCRFNHPRDRGAVIGAART-GGEYPERAGQPVCQYYMRTGSCKFGSSCKY 113
LRTG CGYGSRCRFNHPR+R V+G RT GE+PER GQPVCQ++MRTG+CKFG+SCKY
Sbjct: 61 LRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKY 120
Query: 114 HHPRQPSG--TTTPVSLNYHGYPLRMGQKECSYYVKTGQCKFGATCKFHHPQPAGGQMLA 171
HHPRQ G + TPVSLNY G+PLR G+KECSY+++TGQCKFG+TC++HHP P G Q
Sbjct: 121 HHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQ--- 177
Query: 172 XXXXXXXXXXXXXXXXXXYQTGQPPSGPSSQQYGVLVARPPLLPGSFVQGP--YGPMVLS 229
Y + Q + PSSQQYGV++ARP LLPGS+VQ P YG MVL
Sbjct: 178 --APSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLP 235
Query: 230 PAMYPLSSWGPYQXXXXXXXXXXXXXNVGSTQFNVGSTQFYGITHLPSPTSAYGGPYQTT 289
P M P S W PYQ TQ ++G++ YGIT P S YQ+
Sbjct: 236 PGMVPYSGWNPYQASVSAMPSP-------GTQPSMGTSSVYGIT----PLSPSAPAYQSG 284
Query: 290 VSSIGPSGSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPV 349
SS +G S KE T P+RP+QPEC Y+M+TG+CKFG SCR+HHP + + +A+ LS +
Sbjct: 285 PSS---TGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAST-LSHI 340
Query: 350 GLPLRPGAPPCTHYTQRGICKFGSACKFDH--PIGXXXXXXXXXXXXDMPVAPYPVGSSI 407
GLPLRPGA PCTH+ Q GICKFG ACKFDH DMPVAPYP SS+
Sbjct: 341 GLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYP--SSL 398
Query: 408 GTLAPXXXXXELRPELAPGSSKEP 431
GTLAP + EL SS EP
Sbjct: 399 GTLAPSSSSDQCT-ELISSSSIEP 421
>AT3G06410.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr3:1947471-1949528 REVERSE LENGTH=462
Length = 462
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/417 (54%), Positives = 266/417 (63%), Gaps = 28/417 (6%)
Query: 1 MDRYG--GSQ-SQSDPSPEWPLAAGETALEEPVWQLGLSGGG------ESYPLRPDEADC 51
M+RYG G + S+SDPS EW GETA+E P+W+LGLSGGG ESYP RPDE DC
Sbjct: 1 MERYGRPGEEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDC 60
Query: 52 IYYLRTGYCGYGSRCRFNHPRDRGAVIGAAR-TGGEYPERAGQPVCQYYMRTGSCKFGSS 110
IYYLRTG CGYGSRCRFNHPRDRGAVIG R G PER G PVCQ++MRTG+CKFG+S
Sbjct: 61 IYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGAS 120
Query: 111 CKYHHPRQPSG--TTTPVSLNYHGYPLRMGQKECSYYVKTGQCKFGATCKFHHPQPAGGQ 168
CKYHHPRQ G + PVSL+Y GYPLR G+KECSYY++TGQCKFG TC+F+HP P
Sbjct: 121 CKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLA-V 179
Query: 169 MLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSSQQYGVLVARPPLLPGSFVQGPYGP-MV 227
Y T Q S PSSQQYG+++ RP L GS++Q PYGP MV
Sbjct: 180 QGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMV 239
Query: 228 LSPAMYPLSSWGPYQXXXXXXXXXXXXXNVGSTQFNVGSTQFYGITHLPSPTSAYGGPYQ 287
L P M P S W PYQ TQ ++GS+ YG+T L +AY G YQ
Sbjct: 240 LPPGMVPYSGWNPYQASLSAMPSP-------GTQPSIGSSSIYGLTPLSPSATAYTGTYQ 292
Query: 288 TTVSSIGPSGSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLS 347
S+ S S+ KE P+RPDQPEC Y+M+TG+CKFG SCRYHHP D K + LS
Sbjct: 293 ----SVPSSNSTSKE--FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLS 346
Query: 348 PVGLPLRPGAPPCTHYTQRGICKFGSACKFDH-PIGXXXXXXXXXXXXDMPVAPYPV 403
+GLPLRPG CTH+ Q GICKFG ACKFDH DMPVAPYP+
Sbjct: 347 SIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPI 403
>AT2G47850.3 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=468
Length = 468
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 249/402 (61%), Gaps = 25/402 (6%)
Query: 9 SQSDPSPEWPLAAGETALEEPVWQLGLSGGGESYPLRPDEADCIYYLRTGYCGYGSRCRF 68
SQS +P+W A +T L+E +W+LGL G +SYP RP DC YY+RTG CGYG+RCR+
Sbjct: 11 SQSAQAPDWTPADADTGLQESMWRLGL--GSDSYPERPGAPDCAYYMRTGVCGYGNRCRY 68
Query: 69 NHPRDRGAVIGAARTGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSL 128
NHPRDR +V R G+YPER G+P CQ+Y++TG+CKFG+SCK+HHP+ G+ + V L
Sbjct: 69 NHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPL 128
Query: 129 NYHGYPLRMGQKECSYYVKTGQCKFGATCKFHHPQPAGGQMLAXXXXXXXXXXXXXXXXX 188
N +GYP+R G ECSYY+KTGQCKFG TCKFHHPQPAG +
Sbjct: 129 NIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTV-------PPPPASAPQFYP 181
Query: 189 XYQTGQPPS--GPSSQQYGVLVARPPLLPGSFVQGPYGPMVLSPAMYPLSSWGPYQXXXX 246
Q+ P GPSS + VAR LLPGS++QG YGPM+L+P + P+ W PY
Sbjct: 182 SVQSLMPDQYGGPSSS---LRVAR-TLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVS 237
Query: 247 XXXXXXXXXNVGSTQFNVGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPSGSSQKEHTLP 306
Q VG+T YG+T L S T + G Y + S P+G QKE P
Sbjct: 238 PALSP-------GAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSS---PTGVIQKEQAFP 287
Query: 307 ERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQR 366
ERP +PEC YY+KTG+CKFG SC++HHP D +AN LSP+GLPLRPG CT Y Q
Sbjct: 288 ERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQN 347
Query: 367 GICKFGSACKFDHPIGXXXXXXXXXXXXDMPVAPYPVGSSIG 408
G CKFGS CKFDHP+G D PVAPYPV S +G
Sbjct: 348 GFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLG 389
>AT2G47850.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=468
Length = 468
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/402 (50%), Positives = 249/402 (61%), Gaps = 25/402 (6%)
Query: 9 SQSDPSPEWPLAAGETALEEPVWQLGLSGGGESYPLRPDEADCIYYLRTGYCGYGSRCRF 68
SQS +P+W A +T L+E +W+LGL G +SYP RP DC YY+RTG CGYG+RCR+
Sbjct: 11 SQSAQAPDWTPADADTGLQESMWRLGL--GSDSYPERPGAPDCAYYMRTGVCGYGNRCRY 68
Query: 69 NHPRDRGAVIGAARTGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSL 128
NHPRDR +V R G+YPER G+P CQ+Y++TG+CKFG+SCK+HHP+ G+ + V L
Sbjct: 69 NHPRDRASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPL 128
Query: 129 NYHGYPLRMGQKECSYYVKTGQCKFGATCKFHHPQPAGGQMLAXXXXXXXXXXXXXXXXX 188
N +GYP+R G ECSYY+KTGQCKFG TCKFHHPQPAG +
Sbjct: 129 NIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTV-------PPPPASAPQFYP 181
Query: 189 XYQTGQPPS--GPSSQQYGVLVARPPLLPGSFVQGPYGPMVLSPAMYPLSSWGPYQXXXX 246
Q+ P GPSS + VAR LLPGS++QG YGPM+L+P + P+ W PY
Sbjct: 182 SVQSLMPDQYGGPSSS---LRVAR-TLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVS 237
Query: 247 XXXXXXXXXNVGSTQFNVGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPSGSSQKEHTLP 306
Q VG+T YG+T L S T + G Y + S P+G QKE P
Sbjct: 238 PALSP-------GAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSS---PTGVIQKEQAFP 287
Query: 307 ERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQR 366
ERP +PEC YY+KTG+CKFG SC++HHP D +AN LSP+GLPLRPG CT Y Q
Sbjct: 288 ERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQN 347
Query: 367 GICKFGSACKFDHPIGXXXXXXXXXXXXDMPVAPYPVGSSIG 408
G CKFGS CKFDHP+G D PVAPYPV S +G
Sbjct: 348 GFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLG 389
>AT3G02830.1 | Symbols: ZFN1 | zinc finger protein 1 |
chr3:614075-615916 FORWARD LENGTH=397
Length = 397
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 198/368 (53%), Gaps = 51/368 (13%)
Query: 27 EEPVWQLGLSGGGE----SYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAAR 82
++ +WQ+ LS SYP RP E DC YY+RTG C +GS CRFNHPRDR VI AR
Sbjct: 18 QDAMWQMNLSSDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATAR 77
Query: 83 TGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKEC 142
GEYPER GQP C+YY++TG+CKFG +CK+HHPR +G VSLN GYPLR + +C
Sbjct: 78 MRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDC 137
Query: 143 SYYVKTGQCKFGATCKFHHPQPAGGQMLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSSQ 202
+Y+++TG CKFG TCKF+HPQP M+ P+S
Sbjct: 138 AYFLRTGHCKFGGTCKFNHPQPQPTNMMV---------------------------PTSG 170
Query: 203 QYGVLVARPPLLPGSFVQGP--YGPMVLSPAMYPLSSWGPY--QXXXXXXXXXXXXXNVG 258
Q +R + Q P Y +++ + P+ W PY Q N
Sbjct: 171 QQSYPWSRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYR 230
Query: 259 STQFN-----VGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPSGSSQKEHTLPERPDQPE 313
+ Q N +Q + P + GG Y + +E+ PERP QPE
Sbjct: 231 NLQQNETIESGSQSQGSFSGYNPGSSVPLGGYY-----------ALPRENVFPERPGQPE 279
Query: 314 CHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQRGICKFGS 373
C +YMKTG+CKFG C++HHP D A + LS +GLPLRPG P C YT+ GICKFG
Sbjct: 280 CQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGP 339
Query: 374 ACKFDHPI 381
+CKFDHP+
Sbjct: 340 SCKFDHPM 347
>AT2G47850.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr2:19595953-19598119 FORWARD LENGTH=442
Length = 442
Score = 265 bits (676), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 166/412 (40%), Positives = 205/412 (49%), Gaps = 71/412 (17%)
Query: 9 SQSDPSPEWPLAAGETALEEPVWQLGLSGGGESYPLRPDEADCIYYLRTGYCGYGSRCRF 68
SQS +P+W A +T L+E +W+LGL G +SY
Sbjct: 11 SQSAQAPDWTPADADTGLQESMWRLGL--GSDSY-------------------------- 42
Query: 69 NHPRDRGAVIGAARTGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSL 128
PER G P C YYMRTG C +G+ C+Y+HPR + V
Sbjct: 43 -------------------PERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRA 83
Query: 129 NYHGYPLRMGQKECSYYVKTGQCKFGATCKFHHPQPAGGQM--LAXXXXXXXXXXXXXXX 186
YP R G+ C +Y+KTG CKFGA+CKFHHP+ AGG M +
Sbjct: 84 TGQ-YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREPAGTT 142
Query: 187 XXXYQTGQPPSGPSSQ-----QYG-----VLVARPPLLPGSFVQGPYGPMVLSPAMYPLS 236
P PS Q QYG + VAR LLPGS++QG YGPM+L+P + P+
Sbjct: 143 VPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVAR-TLLPGSYMQGAYGPMLLTPGVVPIP 201
Query: 237 SWGPYQXXXXXXXXXXXXXNVGSTQFNVGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPS 296
W PY Q VG+T YG+T L S T + G Y + S P+
Sbjct: 202 GWSPYSAPVSPALSP-------GAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSS---PT 251
Query: 297 GSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPG 356
G QKE PERP +PEC YY+KTG+CKFG SC++HHP D +AN LSP+GLPLRPG
Sbjct: 252 GVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPG 311
Query: 357 APPCTHYTQRGICKFGSACKFDHPIGXXXXXXXXXXXXDMPVAPYPVGSSIG 408
CT Y Q G CKFGS CKFDHP+G D PVAPYPV S +G
Sbjct: 312 VQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLG 363
>AT5G16540.1 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403437-5405034 FORWARD LENGTH=375
Length = 375
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 185/362 (51%), Gaps = 71/362 (19%)
Query: 27 EEPVWQLGL-----SGGGESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAA 81
+ +WQ+ L G SYP R E DC YY+RTG C +GS CRFNHP DR VI A
Sbjct: 19 QNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATA 78
Query: 82 RTGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKE 141
R GEYPER GQP C++Y++TG+CKFG +CK+HHPR +G VS+N YPLR + +
Sbjct: 79 RIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDD 138
Query: 142 CSYYVKTGQCKFGATCKFHHPQPAGGQMLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSS 201
CSY+++ GQCKFG TCKF+HPQ ++ TGQP S
Sbjct: 139 CSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSL------TGQPSYSWSR 192
Query: 202 QQYGVLVARPPLL--PGSFVQGPYGPMVLSPAMYPLSSWGPYQXXXXXXXXXXXXXNVGS 259
+ VA PP L P F G G + S
Sbjct: 193 TSF---VANPPRLQDPSGFASGSQGGLF-------------------------------S 218
Query: 260 TQFNVGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPSGSSQKEHTLPERPDQPECHYYMK 319
+ F+ G++ G LP +E+ PERP QPEC +YMK
Sbjct: 219 SGFHSGNSVPLGFYALP------------------------RENVFPERPGQPECQFYMK 254
Query: 320 TGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDH 379
TG+CKFG C++HHP D + LS VGLPLRPG P C Y++ GICKFG +CKFDH
Sbjct: 255 TGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDH 314
Query: 380 PI 381
P+
Sbjct: 315 PM 316
>AT5G16540.3 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403598-5405034 FORWARD LENGTH=354
Length = 354
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 184/359 (51%), Gaps = 71/359 (19%)
Query: 30 VWQLGL-----SGGGESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTG 84
+WQ+ L G SYP R E DC YY+RTG C +GS CRFNHP DR VI AR
Sbjct: 1 MWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIK 60
Query: 85 GEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSY 144
GEYPER GQP C++Y++TG+CKFG +CK+HHPR +G VS+N YPLR + +CSY
Sbjct: 61 GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSY 120
Query: 145 YVKTGQCKFGATCKFHHPQPAGGQMLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSSQQY 204
+++ GQCKFG TCKF+HPQ ++ TGQP S +
Sbjct: 121 FLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSL------TGQPSYSWSRTSF 174
Query: 205 GVLVARPPLL--PGSFVQGPYGPMVLSPAMYPLSSWGPYQXXXXXXXXXXXXXNVGSTQF 262
VA PP L P F G G + S+ F
Sbjct: 175 ---VANPPRLQDPSGFASGSQGGLF-------------------------------SSGF 200
Query: 263 NVGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPSGSSQKEHTLPERPDQPECHYYMKTGE 322
+ G++ G LP +E+ PERP QPEC +YMKTG+
Sbjct: 201 HSGNSVPLGFYALP------------------------RENVFPERPGQPECQFYMKTGD 236
Query: 323 CKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDHPI 381
CKFG C++HHP D + LS VGLPLRPG P C Y++ GICKFG +CKFDHP+
Sbjct: 237 CKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 295
>AT5G16540.2 | Symbols: ZFN3 | zinc finger nuclease 3 |
chr5:5403437-5405034 FORWARD LENGTH=368
Length = 368
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 177/362 (48%), Gaps = 78/362 (21%)
Query: 27 EEPVWQLGL-----SGGGESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAA 81
+ +WQ+ L G SYP R E DC YY+RTG C +GS CRFNHP DR VI A
Sbjct: 19 QNAMWQMNLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATA 78
Query: 82 RTGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKE 141
R GEYPER GQP C++Y++TG+CKFG +CK+HHPR +G VS+N YPLR + +
Sbjct: 79 RIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDD 138
Query: 142 CSYYVKTGQCKFGATCKFHHPQPAGGQMLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSS 201
CSY+++ GQCKFG TCKF+HPQ ++ TGQP S
Sbjct: 139 CSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSL------TGQPSYSWSR 192
Query: 202 QQYGVLVARPPLL--PGSFVQGPYGPMVLSPAMYPLSSWGPYQXXXXXXXXXXXXXNVGS 259
+ VA PP L P F G G + S
Sbjct: 193 TSF---VANPPRLQDPSGFASGSQGGLF-------------------------------S 218
Query: 260 TQFNVGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPSGSSQKEHTLPERPDQPECHYYMK 319
+ F+ G++ G LP +E+ PERP QPEC +YMK
Sbjct: 219 SGFHSGNSVPLGFYALP------------------------RENVFPERPGQPECQFYMK 254
Query: 320 TGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDH 379
TG+CKFG C++HHP D P L G P C Y++ GICKFG +CKFDH
Sbjct: 255 TGDCKFGTVCKFHHPRDR-------QTPPPDCVLSSGEPLCVFYSRYGICKFGPSCKFDH 307
Query: 380 PI 381
P+
Sbjct: 308 PM 309
>AT1G04990.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:1419368-1421454 REVERSE LENGTH=404
Length = 404
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 168/342 (49%), Gaps = 53/342 (15%)
Query: 42 YPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYPERAGQPVCQYYMR 101
YP RP E DC +YLRTG CGYGS CR+NHP + + E PER GQP C+Y+++
Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE--ELPERIGQPDCEYFLK 101
Query: 102 TGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYYVKTGQCKFGATCKFHH 161
TG+CK+G +CKYHHP+ +G PV N G P+R+G+K C YY++TG C+FG CKFHH
Sbjct: 102 TGACKYGPTCKYHHPKDRNGAQ-PVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHH 160
Query: 162 PQPAGGQMLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSSQQYGVLVARPPLLPGSFVQG 221
PQP G A + YG L P +P S+V
Sbjct: 161 PQPDNGHSTAYGMSSFPAADLRYASGLTMMS----------TYGTLPR--PQVPQSYV-- 206
Query: 222 PYGPMVLSPA--MYPLSSWGPYQXXXXXXXXXXXXXNVGSTQFNVGSTQFYGITHLPSPT 279
P+++SP+ P W PY ++ +NV + +Y
Sbjct: 207 ---PILVSPSQGFLPPQGWAPYMA-------------ASNSMYNVKNQPYY--------- 241
Query: 280 SAYGGPYQTTVSSIGPSGSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGA 339
+ SS + + L E DQPEC ++M TG CK+G C+Y HP +
Sbjct: 242 ---------SGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRIS 292
Query: 340 SKANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDHPI 381
++P LP RPG P C ++ G CKFG CKFDHP+
Sbjct: 293 QPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 40 ESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYPERAGQPVCQYY 99
E P R + DC Y+L+TG C YG C+++HP+DR P R G+ C YY
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYY 144
Query: 100 MRTGSCKFGSSCKYHHPRQPSGTTT 124
+RTG+C+FG +CK+HHP+ +G +T
Sbjct: 145 LRTGTCRFGVACKFHHPQPDNGHST 169
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 47 DEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTG-GEYPERAGQPVCQYYMRTGSC 105
D+ +C +++ TG C YG C+++HP R + + P R GQP C + G C
Sbjct: 263 DQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFC 322
Query: 106 KFGSSCKYHHPRQP-SGTTTPVSL 128
KFG +CK+ HP P G T SL
Sbjct: 323 KFGPNCKFDHPMLPYPGLTMATSL 346
>AT1G04990.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:1419368-1421454 REVERSE LENGTH=404
Length = 404
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 168/342 (49%), Gaps = 53/342 (15%)
Query: 42 YPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYPERAGQPVCQYYMR 101
YP RP E DC +YLRTG CGYGS CR+NHP + + E PER GQP C+Y+++
Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE--ELPERIGQPDCEYFLK 101
Query: 102 TGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYYVKTGQCKFGATCKFHH 161
TG+CK+G +CKYHHP+ +G PV N G P+R+G+K C YY++TG C+FG CKFHH
Sbjct: 102 TGACKYGPTCKYHHPKDRNGAQ-PVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHH 160
Query: 162 PQPAGGQMLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSSQQYGVLVARPPLLPGSFVQG 221
PQP G A + YG L P +P S+V
Sbjct: 161 PQPDNGHSTAYGMSSFPAADLRYASGLTMMS----------TYGTLPR--PQVPQSYV-- 206
Query: 222 PYGPMVLSPA--MYPLSSWGPYQXXXXXXXXXXXXXNVGSTQFNVGSTQFYGITHLPSPT 279
P+++SP+ P W PY ++ +NV + +Y
Sbjct: 207 ---PILVSPSQGFLPPQGWAPYMA-------------ASNSMYNVKNQPYY--------- 241
Query: 280 SAYGGPYQTTVSSIGPSGSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGA 339
+ SS + + L E DQPEC ++M TG CK+G C+Y HP +
Sbjct: 242 ---------SGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRIS 292
Query: 340 SKANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDHPI 381
++P LP RPG P C ++ G CKFG CKFDHP+
Sbjct: 293 QPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 40 ESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYPERAGQPVCQYY 99
E P R + DC Y+L+TG C YG C+++HP+DR P R G+ C YY
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYY 144
Query: 100 MRTGSCKFGSSCKYHHPRQPSGTTT 124
+RTG+C+FG +CK+HHP+ +G +T
Sbjct: 145 LRTGTCRFGVACKFHHPQPDNGHST 169
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 47 DEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTG-GEYPERAGQPVCQYYMRTGSC 105
D+ +C +++ TG C YG C+++HP R + + P R GQP C + G C
Sbjct: 263 DQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFC 322
Query: 106 KFGSSCKYHHPRQP-SGTTTPVSL 128
KFG +CK+ HP P G T SL
Sbjct: 323 KFGPNCKFDHPMLPYPGLTMATSL 346
>AT3G48440.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr3:17941402-17943576 FORWARD LENGTH=448
Length = 448
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 171/349 (48%), Gaps = 45/349 (12%)
Query: 42 YPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYPERAGQ---PVCQY 98
YP+RP DC +Y+RTG C +GS C+FNHP R I E + G+ C+Y
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKY 166
Query: 99 YMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYYVKTGQCKFGATCK 158
Y RTG CK+G +C+++H SG + LN+ G PLR G+ EC YY++ G CK+GA CK
Sbjct: 167 YFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECK 226
Query: 159 FHH--PQPAGGQMLAXXXXXXXXXXXXXXXXXXYQTGQPPSGPSSQQYGVLVARPPLLPG 216
F+H P GG +Q SS + + P + G
Sbjct: 227 FNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQA-------SSTSW----SSPRHVNG 275
Query: 217 SFVQGPYGPMVLSPAMYPLS---SWGPYQXXXXXXXXXXXXXNVGSTQFNVGS-TQFYGI 272
+ P+ P++LS S W YQ +V S++ V S + Y +
Sbjct: 276 T---SPFIPVMLSQTHGVTSQNPEWNGYQA------------SVYSSERGVFSPSTTYLM 320
Query: 273 THLPSPTSAYGGPYQTTVSSIGPSGSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYH 332
+ + TS Y+ + + PERPDQPEC YYMKTG+CKF +C+YH
Sbjct: 321 NNSSAETSMLLSQYRHQMPA----------EEFPERPDQPECSYYMKTGDCKFKFNCKYH 370
Query: 333 HPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDHPI 381
HP + L+ GLPLRP CT+Y++ GICKFG AC+FDH +
Sbjct: 371 HPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSV 419
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 313 ECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQRGICKFG 372
+C YY +TG CK+G++CR++H + L+ +GLPLRPG C +Y + G CK+G
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYG 222
Query: 373 SACKFDHPIGXXXXXXXXXXXXDMPVAPYPVGSSIGTLAP 412
+ CKF+HP D P G SIGT +P
Sbjct: 223 AECKFNHP------DPTTIGGTDSPSFRGNNGVSIGTFSP 256
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 39 GESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVI-GAARTGGEYPERAGQPVCQ 97
E +P RPD+ +C YY++TG C + C+++HP++R + A P R Q +C
Sbjct: 340 AEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICT 399
Query: 98 YYMRTGSCKFGSSCKYHHPRQP 119
YY R G CKFG +C++ H QP
Sbjct: 400 YYSRYGICKFGPACRFDHSVQP 421
>AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) |
chr3:4025276-4028999 REVERSE LENGTH=524
Length = 524
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 28/161 (17%)
Query: 29 PVWQLGLSGGGESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYP 88
P W+ E YP RP E DC YY++T C YGS+C+FNHPR+ AV + T P
Sbjct: 209 PDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAV--SVETQDSLP 266
Query: 89 ERAGQPVCQYYMRTGSCKFGSSCKYHHPR-------------------QPSGTTTP---- 125
ER +P+C +YM+TG CKFG SCK+HHP+ +P T P
Sbjct: 267 ERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTF 326
Query: 126 ---VSLNYHGYPLRMGQKECSYYVKTGQCKFGATCKFHHPQ 163
+ N G P+R G+ +C +Y+KTG CK+GATC+++HP+
Sbjct: 327 TPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPE 367
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 85/181 (46%), Gaps = 46/181 (25%)
Query: 34 GLSGGGESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAAR----------- 82
L + P+R E DC +YL+TG C YG+ CR+NHP +R A I A
Sbjct: 329 ALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP-ERTAFIPQAAGVNYSLVSSNT 387
Query: 83 -------------------------TGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPR 117
YP+R GQ C YYM+TG CKFG CK+HHP
Sbjct: 388 ANLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPA 447
Query: 118 QPSGTTTP-------VSLNYHGYPLRMGQKECSYYVKTGQCKFGATCKFHHPQPAGGQML 170
T V L+ GYP R G C YY+KTG CK+GATCKF HP P G+++
Sbjct: 448 DRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPP--GEVM 505
Query: 171 A 171
A
Sbjct: 506 A 506
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 42 YPLRPDEADCIYYLRTGYCGYGSRCRFNHP--RDRGAVIGAART----GGEYPERAGQPV 95
YP R E DC +Y++T C +G CRF+HP G + EYPER G+P
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPD 230
Query: 96 CQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYYVKTGQCKFGA 155
C YY++T CK+GS CK++HPR+ + + P R + C++Y+KTG+CKFG
Sbjct: 231 CPYYIKTQRCKYGSKCKFNHPREEAAVSVETQ---DSLPERPSEPMCTFYMKTGKCKFGL 287
Query: 156 TCKFHHPQ 163
+CKFHHP+
Sbjct: 288 SCKFHHPK 295
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 84/184 (45%), Gaps = 61/184 (33%)
Query: 40 ESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDR---------GAVIGAA--------- 81
+S P RP E C +Y++TG C +G C+F+HP+D G+ +G
Sbjct: 263 DSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNP 322
Query: 82 ---------RTGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPS------------ 120
P R+G+ C +Y++TGSCK+G++C+Y+HP + +
Sbjct: 323 HVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSL 382
Query: 121 ----------GTTTPVSLNYHG------------YPLRMGQKECSYYVKTGQCKFGATCK 158
G TP + Y YP R GQ EC YY+KTG+CKFG CK
Sbjct: 383 VSSNTANLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCK 442
Query: 159 FHHP 162
FHHP
Sbjct: 443 FHHP 446
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 304 TLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKA-------NVNLSPVGLPLRPG 356
T P+RP Q EC YYMKTGECKFG+ C++HHP D ++ NV LS G P R G
Sbjct: 416 TYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREG 475
Query: 357 APPCTHYTQRGICKFGSACKFDHP 380
A C +Y + G CK+G+ CKFDHP
Sbjct: 476 ALNCPYYMKTGTCKYGATCKFDHP 499
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 19 LAAGETALEEPVWQLGLSGGGESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVI 78
L T+ + + Q L +YP RP +++C YY++TG C +G RC+F+HP DR + +
Sbjct: 394 LVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAM 453
Query: 79 --------GAARTGGEYPERAGQPVCQYYMRTGSCKFGSSCKYHHP 116
+ YP R G C YYM+TG+CK+G++CK+ HP
Sbjct: 454 TKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 499
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 26/109 (23%)
Query: 298 SSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDM-------------------- 337
S + + +LPERP +P C +YMKTG+CKFG SC++HHP D+
Sbjct: 258 SVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPD 317
Query: 338 GASKANVNLSPV------GLPLRPGAPPCTHYTQRGICKFGSACKFDHP 380
+ +V +P GLP+R G C Y + G CK+G+ C+++HP
Sbjct: 318 ATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 366
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 306 PERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTHYTQ 365
PERP +P+C YY+KT CK+G C+++HP + A S LP RP P CT Y +
Sbjct: 223 PERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS---LPERPSEPMCTFYMK 279
Query: 366 RGICKFGSACKFDHPIGXXXXXXXXXXXXDMPVAPYPVGSSIG 408
G CKFG +CKF HP +P + +GSS+G
Sbjct: 280 TGKCKFGLSCKFHHP-----------KDIQLPSSSQDIGSSVG 311
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
Query: 306 PERPDQPECHYYMKTGECKFGQSCRYHHP--------PDMGASKANVNLSPVGLPLRPGA 357
P+R + +C +YM+T CKFG+SCR+ HP PD + N P RPG
Sbjct: 172 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEE---YPERPGE 228
Query: 358 PPCTHYTQRGICKFGSACKFDHP 380
P C +Y + CK+GS CKF+HP
Sbjct: 229 PDCPYYIKTQRCKYGSKCKFNHP 251
>AT5G63260.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:25361900-25364453 FORWARD LENGTH=435
Length = 435
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
Query: 42 YPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYPERAGQPV---CQY 98
YP+RPD DC +Y+RTG C YGS C+FNHP R IG R E E P C+Y
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVR-ERDEDVENPKLMECKY 156
Query: 99 YMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYYVKTGQCKFGATCK 158
Y RTG CK+G SC++ H ++ + + LN+ G P+R G+KEC +Y++ G CKFG+ CK
Sbjct: 157 YFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCK 216
Query: 159 FHHPQPAG 166
F+HP P
Sbjct: 217 FNHPDPTA 224
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 286 YQTTVSSIGPSGSSQKEHTL-----PERPDQPECHYYMKTGECKFGQSCRYHHPPDMGAS 340
YQ S S SQ +H + PERPDQPEC YY+KTG+CKF C+YHHP +
Sbjct: 307 YQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPK 366
Query: 341 KANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDHPI 381
+A + + GLPLRP CTHY++ GICKFG AC+FDH I
Sbjct: 367 QAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSI 407
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 46/79 (58%)
Query: 86 EYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYY 145
E+PER QP C YY++TG CKF CKYHHP+ S N G PLR Q C++Y
Sbjct: 330 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHY 389
Query: 146 VKTGQCKFGATCKFHHPQP 164
+ G CKFG C+F H P
Sbjct: 390 SRYGICKFGPACRFDHSIP 408
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 293 IGPSGSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLP 352
IG +++ + E P EC YY +TG CK+G+SCR+ H + + + L+ +GLP
Sbjct: 134 IGRERVRERDEDV-ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLP 192
Query: 353 LRPGAPPCTHYTQRGICKFGSACKFDHP 380
+RPG C Y + G CKFGS CKF+HP
Sbjct: 193 IRPGEKECPFYMRNGSCKFGSDCKFNHP 220
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 40 ESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGE-YPERAGQPVCQY 98
E +P RPD+ +C YYL+TG C + +C+++HP++R A + P R Q +C +
Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 388
Query: 99 YMRTGSCKFGSSCKYHH 115
Y R G CKFG +C++ H
Sbjct: 389 YSRYGICKFGPACRFDH 405
>AT5G63260.2 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr5:25361900-25364453 FORWARD LENGTH=451
Length = 451
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 84/143 (58%), Gaps = 18/143 (12%)
Query: 42 YPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRG----AVIGAART--GGEY-------- 87
YP+RPD DC +Y+RTG C YGS C+FNHP R +G+ RT G EY
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRE 157
Query: 88 -PERAGQPV---CQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECS 143
E P C+YY RTG CK+G SC++ H ++ + + LN+ G P+R G+KEC
Sbjct: 158 RDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECP 217
Query: 144 YYVKTGQCKFGATCKFHHPQPAG 166
+Y++ G CKFG+ CKF+HP P
Sbjct: 218 FYMRNGSCKFGSDCKFNHPDPTA 240
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 286 YQTTVSSIGPSGSSQKEHTL-----PERPDQPECHYYMKTGECKFGQSCRYHHPPDMGAS 340
YQ S S SQ +H + PERPDQPEC YY+KTG+CKF C+YHHP +
Sbjct: 323 YQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPK 382
Query: 341 KANVNLSPVGLPLRPGAPPCTHYTQRGICKFGSACKFDHPI 381
+A + + GLPLRP CTHY++ GICKFG AC+FDH I
Sbjct: 383 QAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSI 423
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 46/79 (58%)
Query: 86 EYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYY 145
E+PER QP C YY++TG CKF CKYHHP+ S N G PLR Q C++Y
Sbjct: 346 EFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHY 405
Query: 146 VKTGQCKFGATCKFHHPQP 164
+ G CKFG C+F H P
Sbjct: 406 SRYGICKFGPACRFDHSIP 424
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 293 IGPSGSSQKEHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLP 352
IG +++ + E P EC YY +TG CK+G+SCR+ H + + + L+ +GLP
Sbjct: 150 IGRERVRERDEDV-ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLP 208
Query: 353 LRPGAPPCTHYTQRGICKFGSACKFDHP 380
+RPG C Y + G CKFGS CKF+HP
Sbjct: 209 IRPGEKECPFYMRNGSCKFGSDCKFNHP 236
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 40 ESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGE-YPERAGQPVCQY 98
E +P RPD+ +C YYL+TG C + +C+++HP++R A + P R Q +C +
Sbjct: 345 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 404
Query: 99 YMRTGSCKFGSSCKYHH 115
Y R G CKFG +C++ H
Sbjct: 405 YSRYGICKFGPACRFDH 421
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 31/144 (21%)
Query: 263 NVGSTQFYGITHLPSPTSAYGGPYQTTVSSIGPSGSSQKEH----------TLPERPDQP 312
NVG L P S G +T ++ GS QKE P RPD
Sbjct: 50 NVGLDD--SAKELSVPISVPQGNVETDSRALF--GSDQKEEEEGSEKRMMMVYPVRPDSE 105
Query: 313 ECHYYMKTGECKFGQSCRYHHPPD--------MGASKANVNLSPVGLPL---------RP 355
+C +YM+TG CK+G SC+++HP +G+ + +G P
Sbjct: 106 DCSFYMRTGSCKYGSSCKFNHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRERDEDVENP 165
Query: 356 GAPPCTHYTQRGICKFGSACKFDH 379
C +Y + G CK+G +C+F H
Sbjct: 166 KLMECKYYFRTGGCKYGESCRFSH 189
>AT1G48195.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:17796349-17796597 FORWARD LENGTH=82
Length = 82
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 302 EHTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCT 361
E PERP +PEC YY++TG C Q+C+YHHP ++ S+ L+ GLPLRPG C
Sbjct: 3 EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICP 62
Query: 362 HYTQRGICKFGSACKFDH 379
HY++ GIC+ G CKFDH
Sbjct: 63 HYSRFGICRSGPTCKFDH 80
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 86 EYPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQKECSYY 145
++PER G+P C YY+RTG+C +CKYHHP+ + + +LN G PLR GQ C +Y
Sbjct: 5 KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHY 64
Query: 146 VKTGQCKFGATCKFHH 161
+ G C+ G TCKF H
Sbjct: 65 SRFGICRSGPTCKFDH 80
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 40 ESYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGE-YPERAGQPVCQY 98
E +P RP E +C YYLRTG C C+++HP++ + P R GQ +C +
Sbjct: 4 EKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPH 63
Query: 99 YMRTGSCKFGSSCKYHH 115
Y R G C+ G +CK+ H
Sbjct: 64 YSRFGICRSGPTCKFDH 80
>AT2G32930.1 | Symbols: ZFN2 | zinc finger nuclease 2 |
chr2:13965990-13968419 REVERSE LENGTH=453
Length = 453
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 303 HTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTH 362
H+ ER EC ++M TG CK+G C+Y HP + L+P+ LP RPG P C +
Sbjct: 259 HSFSERA---ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGN 315
Query: 363 YTQRGICKFGSACKFDHPIGXXXXXXXXXXXXDMPVAPYPVGSSIGT 409
+ G CKFG+ CKFDH + +P PYP + T
Sbjct: 316 FKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLPT-PYPYAPPVST 361
>AT2G32930.2 | Symbols: ZFN2 | zinc finger nuclease 2 |
chr2:13965814-13968419 REVERSE LENGTH=467
Length = 467
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 303 HTLPERPDQPECHYYMKTGECKFGQSCRYHHPPDMGASKANVNLSPVGLPLRPGAPPCTH 362
H+ ER EC ++M TG CK+G C+Y HP + L+P+ LP RPG P C +
Sbjct: 259 HSFSERA---ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGN 315
Query: 363 YTQRGICKFGSACKFDHPIGXXXXXXXXXXXXDMPVAPYPVGSSIGT 409
+ G CKFG+ CKFDH + +P PYP + T
Sbjct: 316 FKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLPT-PYPYAPPVST 361
>AT1G29600.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family
protein | chr1:10344046-10346243 FORWARD LENGTH=389
Length = 389
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 16/87 (18%)
Query: 41 SYPLRPDEADCIYYLRTGYCGYGSRCRFNHPRDRGAVIGAARTGGEYPERAGQPV-CQYY 99
+YP+RP E +C++Y++ C +GS C +NHP E P R G+ + C
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHP-----------PLQEIPCRIGKKLDC--- 172
Query: 100 MRTGSCKFGSSCKYHHPRQPSGTTTPV 126
+ G+CK GS+C ++HP++ G + P+
Sbjct: 173 -KAGACKRGSNCPFNHPKERDGDSLPM 198
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 17/85 (20%)
Query: 87 YPERAGQPVCQYYMRTGSCKFGSSCKYHHPRQPSGTTTPVSLNYHGYPLRMGQK-ECSYY 145
YP R G+ C +YM+ C++GS C Y+HP P+ P R+G+K +C
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHP--------PL----QEIPCRIGKKLDC--- 172
Query: 146 VKTGQCKFGATCKFHHPQPAGGQML 170
K G CK G+ C F+HP+ G L
Sbjct: 173 -KAGACKRGSNCPFNHPKERDGDSL 196
>AT1G29570.1 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type
family protein | chr1:10335910-10337854 FORWARD
LENGTH=321
Length = 321
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 42 YPLRPDEADCIYYLRTGYCGYGSRCRFNHP 71
YP+RP + DC +YL+ G C Y S CRFNHP
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81