Miyakogusa Predicted Gene

Lj4g3v2367350.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2367350.3 Non Chatacterized Hit- tr|I0Z6E7|I0Z6E7_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,50,0.000000000000003,Domain in cystathionine beta-synthase and
ot,Cystathionine beta-synthase, core; SUBFAMILY NOT
NAMED,,CUFF.50820.3
         (480 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09020.1 | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose n...   660   0.0  
AT1G27070.1 | Symbols:  | 5'-AMP-activated protein kinase-relate...    55   1e-07

>AT1G09020.1 | Symbols: SNF4, ATSNF4 | homolog of yeast sucrose
           nonfermenting 4 | chr1:2900149-2904212 REVERSE
           LENGTH=487
          Length = 487

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/492 (66%), Positives = 382/492 (77%), Gaps = 18/492 (3%)

Query: 1   MFSPSMESARDAGGVPGTLLIPMRFVWPYGGRTVYLTGSFARWSELLQMSPVEGCPTVFQ 60
           MF  +++S+R      G LL P RFVWPYGGR V+L+GSF RW+E + MSP+EGCPTVFQ
Sbjct: 1   MFGSTLDSSRGNSAASGQLLTPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQ 60

Query: 61  VIHSMAPGYHQYKFFVDGEWRHDEHQPYISGEYGIVNTVLLATDPNFVPV-LNPNLVSGS 119
           VI ++ PGYHQYKFFVDGEWRHDEHQP++SG  G+VNT+ + T P+ VP   +P  +  S
Sbjct: 61  VICNLTPGYHQYKFFVDGEWRHDEHQPFVSGNGGVVNTIFI-TGPDMVPAGFSPETLGRS 119

Query: 120 SMDVDNEAFRRVVRLTDGALSEVMPRISDVDVQTSRQRISVFLSTRTAYELLPESGKVVT 179
           +MDVD+   R     T     E +PR+S VD++ SR RISV LSTRTAYELLPESGKV+ 
Sbjct: 120 NMDVDDVFLR-----TADPSQEAVPRMSGVDLELSRHRISVLLSTRTAYELLPESGKVIA 174

Query: 180 LDIDLPVKQAFHILHEQGIPMAPLWDFCKGQFVGVLSAMDFILILRELGNHGSNLTEEEL 239
           LD++LPVKQAFHIL+EQGIP+APLWDF KGQFVGVL  +DFILILRELG HGSNLTEEEL
Sbjct: 175 LDVNLPVKQAFHILYEQGIPLAPLWDFGKGQFVGVLGPLDFILILRELGTHGSNLTEEEL 234

Query: 240 ETHTISAWKEGK----------WTAFSRRFIHAGPYDNLNDVAVKILQNEISTVPIIHSS 289
           ETHTI+AWKEGK             + R  +  GPYDNL DVA+KILQN+++ VP+I+SS
Sbjct: 235 ETHTIAAWKEGKAHISRQYDGSGRPYPRPLVQVGPYDNLKDVALKILQNKVAAVPVIYSS 294

Query: 290 SEDGSFPQLLHLASLSGILKCICRYFRHCSSSLPILQLPICAIPVGTWVPKIGESNRRPL 349
            +DGS+PQLLHLASLSGILKCICRYFRH SSSLPILQ PIC+IP+GTWVP+IGES+ +PL
Sbjct: 295 LQDGSYPQLLHLASLSGILKCICRYFRHSSSSLPILQQPICSIPLGTWVPRIGESSSKPL 354

Query: 350 AMLRPSASLTSALNLLVQAQXXXXXXXXXXXXXXXXYCRSDITALAKDRAYTHINLDEMT 409
           A LRP ASL SAL LLVQA+                Y RSDITALAKD+AY  I+LD+MT
Sbjct: 355 ATLRPHASLGSALALLVQAEVSSIPVVDDNDSLIDIYSRSDITALAKDKAYAQIHLDDMT 414

Query: 410 VHQALQLGQDSYNPYEL-RSQRCQMCLRTDPLHKVMERLANPGVRRLVIVEAGSKRVEGI 468
           VHQALQLGQD+  PY +   QRC MCLR+D L KVMERLANPGVRRLVIVEAGSKRVEGI
Sbjct: 415 VHQALQLGQDASPPYGIFNGQRCHMCLRSDSLVKVMERLANPGVRRLVIVEAGSKRVEGI 474

Query: 469 ISLSDIFKFFLG 480
           ISLSD+F+F LG
Sbjct: 475 ISLSDVFQFLLG 486


>AT1G27070.1 | Symbols:  | 5'-AMP-activated protein kinase-related |
           chr1:9396945-9399225 REVERSE LENGTH=532
          Length = 532

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 19  LLIPMRFVWPYGGRTVYLTGSFARWSELLQMSPVEGCPTVFQVIHSMAPGYHQYKFFVDG 78
           LL     VWP     V LTGSF  WS   +M   E    VF +   + PG ++ KF VDG
Sbjct: 451 LLRTASIVWPNSASEVLLTGSFDGWSTQRKMKKAENG--VFSLSLKLYPGKYEIKFIVDG 508

Query: 79  EWRHDEHQPYI-SGEY 93
           +W+ D  +P + SG Y
Sbjct: 509 QWKVDPLRPIVTSGGY 524