Miyakogusa Predicted Gene

Lj4g3v2367300.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2367300.2 Non Chatacterized Hit- tr|I1MRG8|I1MRG8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,91.75,0,Cullin
homology domain,Cullin homology; Cullin repeat-like,Cullin
repeat-like-containing domain; "Wi,CUFF.50821.2
         (520 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435 FO...   859   0.0  
AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...   859   0.0  
AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...   859   0.0  
AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...   859   0.0  
AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681...   746   0.0  
AT1G43140.1 | Symbols:  | Cullin family protein | chr1:16232785-...   694   0.0  
AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 |...   324   8e-89
AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B | chr1:2620216...   316   2e-86
AT5G46210.1 | Symbols: CUL4, ATCUL4 | cullin4 | chr5:18731569-18...   296   2e-80
AT1G59790.1 | Symbols:  | Cullin family protein | chr1:22001504-...   142   4e-34
AT2G04660.1 | Symbols: APC2 | anaphase-promoting complex/cycloso...    70   3e-12

>AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435
           FORWARD LENGTH=738
          Length = 738

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/521 (77%), Positives = 468/521 (89%), Gaps = 4/521 (0%)

Query: 1   MLKAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKV 60
           MLK+EECLK+E++RV HYLHS+SEPKL+EKVQHELL V+ASQLLEKEHSGC ALLRDDKV
Sbjct: 221 MLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKV 280

Query: 61  EDLSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQI 120
           +DLSRM+RL+ KI RGL+PV+++FKQHVT EG ALV+               T  +QEQ+
Sbjct: 281 DDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQ---QAEDTATNQVANTASVQEQV 337

Query: 121 FVRKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILK 180
            +RKVIEL DKYM YV +CFQNHTLFHKALKEAFEIFCNK V+G+SSAELLATFCDNILK
Sbjct: 338 LIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILK 397

Query: 181 KGGSEKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILS 240
           KGGSEKLSDEA+E+TLEKVVKLLAYI DKDLFAEFYRKKLARRLLFD+SANDDHERSIL+
Sbjct: 398 KGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 457

Query: 241 KLKQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPN-DTGIDLTVTVLTTGFWPSY 299
           KLKQQCG QFT KMEGMV DLT+A+ENQ +F++YL  NP  + GIDLTVTVLTTGFWPSY
Sbjct: 458 KLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSY 517

Query: 300 KSFDLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQA 359
           KSFD+NLP+EM+KCVE+FK FY+TKTK RKLTWIYSLGTC++ GKFD K +EL+V+TYQA
Sbjct: 518 KSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQA 577

Query: 360 SALLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISNTDYFEF 419
           + LLLFN++D+LSY+EI+ QLNL+ +D++RLLHSLSCAKYKIL KEPNTKT+S  D FEF
Sbjct: 578 AVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEF 637

Query: 420 NSKFTDKMRRIKIPLPPVDEKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLVMECV 479
           NSKFTD+MRRIKIPLPPVDE+KKV+E+VDKDRRYAIDA++VRIMKSRKVLG+QQLV ECV
Sbjct: 638 NSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECV 697

Query: 480 EQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
           EQL RMFKPD+KAIKKR+EDLI+RDYLER+K+NPNMFRYLA
Sbjct: 698 EQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738


>AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/521 (77%), Positives = 468/521 (89%), Gaps = 4/521 (0%)

Query: 1   MLKAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKV 60
           MLK+EECLK+E++RV HYLHS+SEPKL+EKVQHELL V+ASQLLEKEHSGC ALLRDDKV
Sbjct: 221 MLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKV 280

Query: 61  EDLSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQI 120
           +DLSRM+RL+ KI RGL+PV+++FKQHVT EG ALV+               T  +QEQ+
Sbjct: 281 DDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQ---QAEDTATNQVANTASVQEQV 337

Query: 121 FVRKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILK 180
            +RKVIEL DKYM YV +CFQNHTLFHKALKEAFEIFCNK V+G+SSAELLATFCDNILK
Sbjct: 338 LIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILK 397

Query: 181 KGGSEKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILS 240
           KGGSEKLSDEA+E+TLEKVVKLLAYI DKDLFAEFYRKKLARRLLFD+SANDDHERSIL+
Sbjct: 398 KGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 457

Query: 241 KLKQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPN-DTGIDLTVTVLTTGFWPSY 299
           KLKQQCG QFT KMEGMV DLT+A+ENQ +F++YL  NP  + GIDLTVTVLTTGFWPSY
Sbjct: 458 KLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSY 517

Query: 300 KSFDLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQA 359
           KSFD+NLP+EM+KCVE+FK FY+TKTK RKLTWIYSLGTC++ GKFD K +EL+V+TYQA
Sbjct: 518 KSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQA 577

Query: 360 SALLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISNTDYFEF 419
           + LLLFN++D+LSY+EI+ QLNL+ +D++RLLHSLSCAKYKIL KEPNTKT+S  D FEF
Sbjct: 578 AVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEF 637

Query: 420 NSKFTDKMRRIKIPLPPVDEKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLVMECV 479
           NSKFTD+MRRIKIPLPPVDE+KKV+E+VDKDRRYAIDA++VRIMKSRKVLG+QQLV ECV
Sbjct: 638 NSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECV 697

Query: 480 EQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
           EQL RMFKPD+KAIKKR+EDLI+RDYLER+K+NPNMFRYLA
Sbjct: 698 EQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738


>AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/521 (77%), Positives = 468/521 (89%), Gaps = 4/521 (0%)

Query: 1   MLKAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKV 60
           MLK+EECLK+E++RV HYLHS+SEPKL+EKVQHELL V+ASQLLEKEHSGC ALLRDDKV
Sbjct: 221 MLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKV 280

Query: 61  EDLSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQI 120
           +DLSRM+RL+ KI RGL+PV+++FKQHVT EG ALV+               T  +QEQ+
Sbjct: 281 DDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQ---QAEDTATNQVANTASVQEQV 337

Query: 121 FVRKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILK 180
            +RKVIEL DKYM YV +CFQNHTLFHKALKEAFEIFCNK V+G+SSAELLATFCDNILK
Sbjct: 338 LIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILK 397

Query: 181 KGGSEKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILS 240
           KGGSEKLSDEA+E+TLEKVVKLLAYI DKDLFAEFYRKKLARRLLFD+SANDDHERSIL+
Sbjct: 398 KGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 457

Query: 241 KLKQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPN-DTGIDLTVTVLTTGFWPSY 299
           KLKQQCG QFT KMEGMV DLT+A+ENQ +F++YL  NP  + GIDLTVTVLTTGFWPSY
Sbjct: 458 KLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSY 517

Query: 300 KSFDLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQA 359
           KSFD+NLP+EM+KCVE+FK FY+TKTK RKLTWIYSLGTC++ GKFD K +EL+V+TYQA
Sbjct: 518 KSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQA 577

Query: 360 SALLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISNTDYFEF 419
           + LLLFN++D+LSY+EI+ QLNL+ +D++RLLHSLSCAKYKIL KEPNTKT+S  D FEF
Sbjct: 578 AVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEF 637

Query: 420 NSKFTDKMRRIKIPLPPVDEKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLVMECV 479
           NSKFTD+MRRIKIPLPPVDE+KKV+E+VDKDRRYAIDA++VRIMKSRKVLG+QQLV ECV
Sbjct: 638 NSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECV 697

Query: 480 EQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
           EQL RMFKPD+KAIKKR+EDLI+RDYLER+K+NPNMFRYLA
Sbjct: 698 EQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738


>AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/521 (77%), Positives = 468/521 (89%), Gaps = 4/521 (0%)

Query: 1   MLKAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKV 60
           MLK+EECLK+E++RV HYLHS+SEPKL+EKVQHELL V+ASQLLEKEHSGC ALLRDDKV
Sbjct: 221 MLKSEECLKKERERVAHYLHSSSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKV 280

Query: 61  EDLSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQI 120
           +DLSRM+RL+ KI RGL+PV+++FKQHVT EG ALV+               T  +QEQ+
Sbjct: 281 DDLSRMYRLYHKILRGLEPVANIFKQHVTAEGNALVQ---QAEDTATNQVANTASVQEQV 337

Query: 121 FVRKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILK 180
            +RKVIEL DKYM YV +CFQNHTLFHKALKEAFEIFCNK V+G+SSAELLATFCDNILK
Sbjct: 338 LIRKVIELHDKYMVYVTECFQNHTLFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILK 397

Query: 181 KGGSEKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILS 240
           KGGSEKLSDEA+E+TLEKVVKLLAYI DKDLFAEFYRKKLARRLLFD+SANDDHERSIL+
Sbjct: 398 KGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT 457

Query: 241 KLKQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPN-DTGIDLTVTVLTTGFWPSY 299
           KLKQQCG QFT KMEGMV DLT+A+ENQ +F++YL  NP  + GIDLTVTVLTTGFWPSY
Sbjct: 458 KLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSY 517

Query: 300 KSFDLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQA 359
           KSFD+NLP+EM+KCVE+FK FY+TKTK RKLTWIYSLGTC++ GKFD K +EL+V+TYQA
Sbjct: 518 KSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQA 577

Query: 360 SALLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISNTDYFEF 419
           + LLLFN++D+LSY+EI+ QLNL+ +D++RLLHSLSCAKYKIL KEPNTKT+S  D FEF
Sbjct: 578 AVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEF 637

Query: 420 NSKFTDKMRRIKIPLPPVDEKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLVMECV 479
           NSKFTD+MRRIKIPLPPVDE+KKV+E+VDKDRRYAIDA++VRIMKSRKVLG+QQLV ECV
Sbjct: 638 NSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECV 697

Query: 480 EQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
           EQL RMFKPD+KAIKKR+EDLI+RDYLER+K+NPNMFRYLA
Sbjct: 698 EQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 738


>AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681212
           FORWARD LENGTH=742
          Length = 742

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/522 (68%), Positives = 433/522 (82%), Gaps = 3/522 (0%)

Query: 1   MLKAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKV 60
           M+KAEE L+ EK+RV +YLHST+EPKL+ KVQ+ELL V A QL+E EHSGC ALLRDDK+
Sbjct: 222 MIKAEESLRLEKERVTNYLHSTTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDDKM 281

Query: 61  EDLSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQI 120
           +DL+RM+RL+  IP+GLDPV+ +FKQH+T EG AL+K                + +Q+Q+
Sbjct: 282 DDLARMYRLYHPIPQGLDPVADLFKQHITVEGSALIK-QATEAATDKAASTSGLKVQDQV 340

Query: 121 FVRKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILK 180
            +R++I+L DK+M YV++CFQ H+LFHKALKEAFE+FCNK V+G SSAE+LAT+CDNILK
Sbjct: 341 LIRQLIDLHDKFMVYVDECFQKHSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDNILK 400

Query: 181 KGGS-EKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSIL 239
            GG  EKL +E +E TLEKVVKLL YI DKDLFAEF+RKK ARRLLFD++ ND HERS+L
Sbjct: 401 TGGGIEKLENEDLELTLEKVVKLLVYISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLL 460

Query: 240 SKLKQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPNDT-GIDLTVTVLTTGFWPS 298
           +K K+  G QFT KMEGM+ D+T+AKE+QTNF E+LS N     G+D TVTVLTTGFWPS
Sbjct: 461 TKFKELLGAQFTSKMEGMLTDMTLAKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWPS 520

Query: 299 YKSFDLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQ 358
           YK+ DLNLP EMV CVE FK +Y TKT  R+L+WIYSLGTC + GKFD KT+E+VVTTYQ
Sbjct: 521 YKTTDLNLPIEMVNCVEAFKAYYGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQ 580

Query: 359 ASALLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISNTDYFE 418
           A+ LLLFN+++RLSY+EI+ QLNL  +D+ RLLHSLSC KYKIL KEP ++ ISNTD FE
Sbjct: 581 AAVLLLFNNTERLSYTEILEQLNLGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFE 640

Query: 419 FNSKFTDKMRRIKIPLPPVDEKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLVMEC 478
           FNSKFTDKMRRI++PLPP+DE+KK++E+VDKDRRYAIDA+LVRIMKSRKVLG+QQLV EC
Sbjct: 641 FNSKFTDKMRRIRVPLPPMDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSEC 700

Query: 479 VEQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
           VE L +MFKPD+K IKKRIEDLISRDYLER+ DNPN F+YLA
Sbjct: 701 VEHLSKMFKPDIKMIKKRIEDLISRDYLERDTDNPNTFKYLA 742


>AT1G43140.1 | Symbols:  | Cullin family protein |
           chr1:16232785-16236109 FORWARD LENGTH=721
          Length = 721

 Score =  694 bits (1791), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/522 (66%), Positives = 412/522 (78%), Gaps = 32/522 (6%)

Query: 1   MLKAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKV 60
           MLKAEECLK EK+RV +YLHST+EPKL+EKVQ+ELL V A QL+E EHSGC ALLRDDK+
Sbjct: 230 MLKAEECLKLEKERVTNYLHSTTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKM 289

Query: 61  EDLSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQI 120
            DLSRM+RL+  IP+GL+P++ +FKQHVT EG AL+K                     Q+
Sbjct: 290 GDLSRMYRLYRLIPQGLEPIADLFKQHVTAEGNALIKQAADAATNQDASA-------SQV 342

Query: 121 FVRKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILK 180
            VRK IEL DKYM YV++CFQ H+LFHK LKEAFE+FCNK V+G SSAE+LAT+CDNILK
Sbjct: 343 LVRKEIELHDKYMVYVDECFQKHSLFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILK 402

Query: 181 -KGGSEKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSIL 239
            +GGSEKLSDEA E TLEKVV LL YI DKDLFAEFYRKK ARRLLFD+S        I+
Sbjct: 403 TRGGSEKLSDEATEITLEKVVNLLVYISDKDLFAEFYRKKQARRLLFDRSG-------IM 455

Query: 240 SKLKQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDN-PNDTGIDLTVTVLTTGFWPS 298
            +                V D+T+A+E QTNF +YLS N     GID TVTVLTTGFWPS
Sbjct: 456 KE----------------VTDITLARELQTNFVDYLSANMTTKLGIDFTVTVLTTGFWPS 499

Query: 299 YKSFDLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQ 358
           YK+ DLNLP EMV CVE FK FY TKT  R+L+WIYSLGTC+++GKF+ KT+ELVV+TYQ
Sbjct: 500 YKTTDLNLPTEMVNCVEAFKVFYGTKTNSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQ 559

Query: 359 ASALLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISNTDYFE 418
           A+ LLLFN+++RLSY+EI  QLNL+ +D++RLLHSLSC KYKIL KEP ++TIS TD FE
Sbjct: 560 AAVLLLFNNAERLSYTEISEQLNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTDTFE 619

Query: 419 FNSKFTDKMRRIKIPLPPVDEKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLVMEC 478
           FNSKFTDKMR+I++PLPP+DE+KKV+E+VDKDRRYAIDA+LVRIMKSRKVL +QQLV EC
Sbjct: 620 FNSKFTDKMRKIRVPLPPMDERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSEC 679

Query: 479 VEQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
           VE L +MFKPD+K IKKRIEDLI+RDYLER+ +N N F+Y+A
Sbjct: 680 VEHLSKMFKPDIKMIKKRIEDLINRDYLERDTENANTFKYVA 721


>AT1G26830.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 |
           chr1:9296063-9298374 FORWARD LENGTH=732
          Length = 732

 Score =  324 bits (831), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 196/525 (37%), Positives = 296/525 (56%), Gaps = 26/525 (4%)

Query: 3   KAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKVED 62
           K+E+ L  E +RV HYL + SE K+   V+ E+++ +  +L+  E+SG   +L +DK ED
Sbjct: 227 KSEKRLTEEIERVAHYLDAKSEEKITSVVEKEMIANHMQRLVHMENSGLVNMLLNDKYED 286

Query: 63  LSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQIFV 122
           L RM+ LF ++  GL  V  +   H+   G  LV                        FV
Sbjct: 287 LGRMYNLFRRVTNGLVTVRDVMTSHLREMGKQLVTDPEKSKDPVE-------------FV 333

Query: 123 RKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILKKG 182
           +++++ +DKY   +N  F N   F  AL  +FE F N +     S E ++ F D+ L+KG
Sbjct: 334 QRLLDERDKYDKIINTAFGNDKTFQNALNSSFEYFINLNAR---SPEFISLFVDDKLRKG 390

Query: 183 GSEKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILSKL 242
             + ++D  VE  L+KV+ L  Y+ +KD+F ++Y++ LA+RLL  K+ +DD ERS++ KL
Sbjct: 391 -LKGITDVDVEVILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKL 449

Query: 243 KQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPNDTGIDLTVTVLTTGFWPSYKSF 302
           K +CG QFT K+EGM  D+  +++    F  Y S      G  L V VLTTG WP+  + 
Sbjct: 450 KTECGYQFTSKLEGMFTDMKTSEDTMRGF--YGSHPELSEGPTLIVQVLTTGSWPTQPAV 507

Query: 303 DLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFD-PKTVELVVTTYQASA 361
             NLPAE+    E F+ +Y      R+L+W  ++GT ++   F   +  EL V+T+Q   
Sbjct: 508 PCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAIFGKGQKHELNVSTFQMCV 567

Query: 362 LLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYK-ILNKEPNTKTISNTDYFEFN 420
           L+LFN+SDRLSY EI     +   D+ R L SL+C K K ++ KEP +K I   D F  N
Sbjct: 568 LMLFNNSDRLSYKEIEQATEIPAADLKRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVN 627

Query: 421 SKFTDKMRRIKIPLPPVD-----EKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLV 475
            KFT K  ++KI           EK++  + V++DR+  I+A++VRIMKSRK+L +  ++
Sbjct: 628 DKFTSKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNII 687

Query: 476 MECVEQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
            E  +QL   F  +   IKKRIE LI RD+LER+  +  ++RYLA
Sbjct: 688 AEVTKQLQPRFLANPTEIKKRIESLIERDFLERDSTDRKLYRYLA 732


>AT1G69670.1 | Symbols: CUL3B, ATCUL3B | cullin 3B |
           chr1:26202169-26204442 REVERSE LENGTH=732
          Length = 732

 Score =  316 bits (810), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/525 (36%), Positives = 296/525 (56%), Gaps = 26/525 (4%)

Query: 3   KAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKVED 62
           KAE+ L  E +RV +YL + SE K+   V+ E+++ +  +L+  E+SG   +L +DK ED
Sbjct: 227 KAEKPLVEEVERVVNYLDAKSEAKITSVVEREMIANHVQRLVHMENSGLVNMLLNDKYED 286

Query: 63  LSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQIFV 122
           + RM+ LF ++  GL  V  +   H+   G  LV                        FV
Sbjct: 287 MGRMYSLFRRVANGLVTVRDVMTLHLREMGKQLVTDPEKSKDPVE-------------FV 333

Query: 123 RKVIELQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILKKG 182
           +++++ +DKY   +N  F N   F  AL  +FE F N +     S E ++ F D+ L+KG
Sbjct: 334 QRLLDERDKYDRIINMAFNNDKTFQNALNSSFEYFVNLNTR---SPEFISLFVDDKLRKG 390

Query: 183 GSEKLSDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILSKL 242
             + + +E V+  L+KV+ L  Y+ +KD+F ++Y++ LA+RLL  K+ +DD ER+++ KL
Sbjct: 391 -LKGVGEEDVDLILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERNLIVKL 449

Query: 243 KQQCGQQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPNDTGIDLTVTVLTTGFWPSYKSF 302
           K +CG QFT K+EGM  D+  + +    F  Y S      G  L V VLTTG WP+  + 
Sbjct: 450 KTECGYQFTSKLEGMFTDMKTSHDTLLGF--YNSHPELSEGPTLVVQVLTTGSWPTQPTI 507

Query: 303 DLNLPAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFD-PKTVELVVTTYQASA 361
             NLPAE+    E F+ +Y      R+L+W  ++GT ++   F   +  EL V+T+Q   
Sbjct: 508 QCNLPAEVSVLCEKFRSYYLGTHTGRRLSWQTNMGTADIKAVFGKGQKHELNVSTFQMCV 567

Query: 362 LLLFNSSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYK-ILNKEPNTKTISNTDYFEFN 420
           L+LFN+SDRLSY EI     +   D+ R L S++C K K +L KEP +K I+  D+F  N
Sbjct: 568 LMLFNNSDRLSYKEIEQATEIPTPDLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVN 627

Query: 421 SKFTDKMRRIKIPLPPVD-----EKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLV 475
            +F  K  ++KI           EK++  + V++DR+  I+A++VRIMKSR+VL +  ++
Sbjct: 628 DRFASKFYKVKIGTVVAQKETEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNII 687

Query: 476 MECVEQLGRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
            E  +QL   F  +   IKKRIE LI RD+LER+  +  ++RYLA
Sbjct: 688 AEVTKQLQTRFLANPTEIKKRIESLIERDFLERDNTDRKLYRYLA 732


>AT5G46210.1 | Symbols: CUL4, ATCUL4 | cullin4 |
           chr5:18731569-18736653 REVERSE LENGTH=792
          Length = 792

 Score =  296 bits (759), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 189/518 (36%), Positives = 287/518 (55%), Gaps = 30/518 (5%)

Query: 8   LKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKVEDLSRMF 67
           L  E +R   Y+ + +   L+  V+ +LL  +   +LEK   G   L+   + EDL RM 
Sbjct: 300 LHEENERCILYIDAVTRKPLITTVERQLLERHILVVLEK---GFTTLMDGRRTEDLQRMQ 356

Query: 68  RLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQIFVRKVIE 127
            LFS++   L+ +      +V   G  +V                    +++  V+ +++
Sbjct: 357 TLFSRV-NALESLRQALSSYVRKTGQKIVMDEE----------------KDKDMVQSLLD 399

Query: 128 LQDKYMAYVNDCFQNHTLFHKALKEAFEIFCNKDVSGNSSAELLATFCDNILKKGGSEKL 187
            +        + F  +  F   +K++FE   N  +  N  AEL+A F D  L+  G++  
Sbjct: 400 FKASLDIIWEESFYKNESFGNTIKDSFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGT 456

Query: 188 SDEAVEETLEKVVKLLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILSKLKQQCG 247
           S+E +E  LEKV+ L  +I  KD+F  FY+K LA+RLL  KSA+ D E+S++SKLK +CG
Sbjct: 457 SEEELESVLEKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECG 516

Query: 248 QQFTVKMEGMVNDLTMAKENQTNFDEYLSDNPN-DTGIDLTVTVLTTGFWPSYKSFDLNL 306
            QFT K+EGM  D+ ++KE   +F +         +GI+++V VLTTG+WP+Y   D+ L
Sbjct: 517 SQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKL 576

Query: 307 PAEMVKCVEIFKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQASALLLFN 366
           P E+    +IFKEFY +K   R+L W  SLG C +   F     EL V+ +QA  L+LFN
Sbjct: 577 PHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFN 636

Query: 367 SSDRLSYSEIMTQLNLTDDDVIRLLHSLSCAKYKILNKEPNTKTISNTDYFEFNSKFTDK 426
            + +LS+ +I    ++ D ++ R L SL+C K ++L K P  + + + D FEFN +F   
Sbjct: 637 DAMKLSFEDIKDSTSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAP 696

Query: 427 MRRIKIPL----PPVDEKKKVIENVDKDRRYAIDASLVRIMKSRKVLGYQQLVMECVEQL 482
           + RIK+        V+E     E V +DR+Y IDA++VRIMK+RKVL +  L+ E  +QL
Sbjct: 697 LYRIKVNAIQMKETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQL 756

Query: 483 GRMFKPDVKAIKKRIEDLISRDYLEREKDNPNMFRYLA 520
               KP    +KKRIE LI R+YLEREK NP ++ YLA
Sbjct: 757 KFPIKP--ADLKKRIESLIDREYLEREKSNPQIYNYLA 792


>AT1G59790.1 | Symbols:  | Cullin family protein |
           chr1:22001504-22003385 FORWARD LENGTH=374
          Length = 374

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/149 (48%), Positives = 98/149 (65%), Gaps = 17/149 (11%)

Query: 1   MLKAEECLKREKDRVGHYLHSTSEPKLLEKVQHELLSVYASQLLEKEHSGCHALLRDDKV 60
           M+K EECLK E++RV HYLHS +EPKL+EK+Q+ELL +     LE EHSG  ALLRDDK 
Sbjct: 227 MIKVEECLKMERERVTHYLHSITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKK 286

Query: 61  EDLSRMFRLFSKIPRGLDPVSSMFKQHVTTEGMALVKLXXXXXXXXXXXXXXTIGLQEQI 120
            DLSR++RL+  IP+ L  V+ +FK+H+T EG AL+K                    ++ 
Sbjct: 287 NDLSRIYRLYLPIPKRLGRVADLFKKHITEEGNALIK-----------------QADDKT 329

Query: 121 FVRKVIELQDKYMAYVNDCFQNHTLFHKA 149
             + +IEL +K++ YV +CFQNHTLFHK 
Sbjct: 330 TNQLLIELHNKFIVYVIECFQNHTLFHKV 358


>AT2G04660.1 | Symbols: APC2 | anaphase-promoting complex/cyclosome
           2 | chr2:1624933-1629039 FORWARD LENGTH=865
          Length = 865

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 5/193 (2%)

Query: 202 LLAYIGDKDLFAEFYRKKLARRLLFDKSANDDHERSILSKLKQQCGQQFTVKMEGMVNDL 261
           L+  IG K+     YR  LA +LL     + D E   +  LK   G+    + E M+NDL
Sbjct: 543 LVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCEIMLNDL 602

Query: 262 TMAKENQTNFDEYLSDNP----NDTGID-LTVTVLTTGFWPSYKSFDLNLPAEMVKCVEI 316
             +K   TN  +          N+  +D LT T+L+T FWP  +   L LP  + K +  
Sbjct: 603 IDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFWPPIQDEPLELPGPVDKLLSD 662

Query: 317 FKEFYQTKTKQRKLTWIYSLGTCNVVGKFDPKTVELVVTTYQASALLLFNSSDRLSYSEI 376
           +   Y      RKL W  +LGT  +  +F+ + ++  V+   A+ ++ F      +Y ++
Sbjct: 663 YANRYHEIKTPRKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKKSWTYKDL 722

Query: 377 MTQLNLTDDDVIR 389
              + +  D + R
Sbjct: 723 AEVIGIPIDALNR 735