Miyakogusa Predicted Gene

Lj4g3v2365220.3
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2365220.3 Non Chatacterized Hit- tr|I3SL73|I3SL73_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,97.51,0,Cullin
repeat-like,Cullin repeat-like-containing domain; Cullin,Cullin,
N-terminal; no description,N,CUFF.50800.3
         (202 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435 FO...   174   5e-44
AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...   174   5e-44
AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...   174   5e-44
AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1129...   174   5e-44
AT1G59790.1 | Symbols:  | Cullin family protein | chr1:22001504-...   147   5e-36
AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681...   135   3e-32
AT1G43140.1 | Symbols:  | Cullin family protein | chr1:16232785-...   134   4e-32
AT1G59800.1 | Symbols:  | Cullin family protein | chr1:22004964-...   119   1e-27

>AT4G02570.4 | Symbols: CUL1 | cullin 1 | chr4:1129315-1133435
           FORWARD LENGTH=738
          Length = 738

 Score =  174 bits (440), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 83/182 (45%), Positives = 126/182 (69%), Gaps = 2/182 (1%)

Query: 6   KKTTKSFEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENC 65
           ++ T   E+ W  +QT + +L   +EG+++ + F  E  M  +TT+Y +CT +    +  
Sbjct: 2   ERKTIDLEQGWDYMQTGITKLKRILEGLNEPA-FDSEQYMMLYTTIYNMCTQKPPH-DYS 59

Query: 66  ELLYAKYKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHF 125
           + LY KY++ FEEYINSTVLP+L+ K  E ML EL +RWSN+K+M  WLSRFF+YL+R+F
Sbjct: 60  QQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYF 119

Query: 126 IFRRQLPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLE 185
           I RR LP L E     F DLV+++++ +V  A++A++D+E+ GE+IDRAL+ N L +Y+E
Sbjct: 120 IARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVE 179

Query: 186 IG 187
           IG
Sbjct: 180 IG 181


>AT4G02570.3 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score =  174 bits (440), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 83/182 (45%), Positives = 126/182 (69%), Gaps = 2/182 (1%)

Query: 6   KKTTKSFEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENC 65
           ++ T   E+ W  +QT + +L   +EG+++ + F  E  M  +TT+Y +CT +    +  
Sbjct: 2   ERKTIDLEQGWDYMQTGITKLKRILEGLNEPA-FDSEQYMMLYTTIYNMCTQKPPH-DYS 59

Query: 66  ELLYAKYKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHF 125
           + LY KY++ FEEYINSTVLP+L+ K  E ML EL +RWSN+K+M  WLSRFF+YL+R+F
Sbjct: 60  QQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYF 119

Query: 126 IFRRQLPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLE 185
           I RR LP L E     F DLV+++++ +V  A++A++D+E+ GE+IDRAL+ N L +Y+E
Sbjct: 120 IARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVE 179

Query: 186 IG 187
           IG
Sbjct: 180 IG 181


>AT4G02570.2 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score =  174 bits (440), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 83/182 (45%), Positives = 126/182 (69%), Gaps = 2/182 (1%)

Query: 6   KKTTKSFEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENC 65
           ++ T   E+ W  +QT + +L   +EG+++ + F  E  M  +TT+Y +CT +    +  
Sbjct: 2   ERKTIDLEQGWDYMQTGITKLKRILEGLNEPA-FDSEQYMMLYTTIYNMCTQKPPH-DYS 59

Query: 66  ELLYAKYKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHF 125
           + LY KY++ FEEYINSTVLP+L+ K  E ML EL +RWSN+K+M  WLSRFF+YL+R+F
Sbjct: 60  QQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYF 119

Query: 126 IFRRQLPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLE 185
           I RR LP L E     F DLV+++++ +V  A++A++D+E+ GE+IDRAL+ N L +Y+E
Sbjct: 120 IARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVE 179

Query: 186 IG 187
           IG
Sbjct: 180 IG 181


>AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 |
           chr4:1129315-1133435 FORWARD LENGTH=738
          Length = 738

 Score =  174 bits (440), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 83/182 (45%), Positives = 126/182 (69%), Gaps = 2/182 (1%)

Query: 6   KKTTKSFEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENC 65
           ++ T   E+ W  +QT + +L   +EG+++ + F  E  M  +TT+Y +CT +    +  
Sbjct: 2   ERKTIDLEQGWDYMQTGITKLKRILEGLNEPA-FDSEQYMMLYTTIYNMCTQKPPH-DYS 59

Query: 66  ELLYAKYKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHF 125
           + LY KY++ FEEYINSTVLP+L+ K  E ML EL +RWSN+K+M  WLSRFF+YL+R+F
Sbjct: 60  QQLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYF 119

Query: 126 IFRRQLPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLE 185
           I RR LP L E     F DLV+++++ +V  A++A++D+E+ GE+IDRAL+ N L +Y+E
Sbjct: 120 IARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVE 179

Query: 186 IG 187
           IG
Sbjct: 180 IG 181


>AT1G59790.1 | Symbols:  | Cullin family protein |
           chr1:22001504-22003385 FORWARD LENGTH=374
          Length = 374

 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 6/178 (3%)

Query: 12  FEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENCELLYAK 71
           FEE W  +Q  + +LI  +EG + +  F + +C   +T +Y +C  R    +  + LY K
Sbjct: 14  FEEGWSNIQKGITKLIRILEG-EPEPTFYFSECFKLYTIIYDMCVQRS---DYSQQLYEK 69

Query: 72  YKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHFIFRRQ- 130
           Y+KV E+Y   TVLPSL+ K  E ML EL++RW+N+KIM  WLS+FF Y++RH + R + 
Sbjct: 70  YRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRSKI 129

Query: 131 -LPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLEIG 187
            +PSL+E     F DLV+ ++     + ++A+I +E+ GE+IDRALV N L +Y+E G
Sbjct: 130 PIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKNVLDIYVENG 187


>AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681212
           FORWARD LENGTH=742
          Length = 742

 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 1/181 (0%)

Query: 7   KTTKSFEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENCE 66
           K     E  W V++  V +L   +E V D+  F     M  +TTV+ LCT +    +  +
Sbjct: 3   KKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPN-DYSQ 61

Query: 67  LLYAKYKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHFI 126
            +Y +Y  V+ +Y   TVLP+++ K  E ML EL++RW+N KI+  WLS FF YL+R + 
Sbjct: 62  QIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFYT 121

Query: 127 FRRQLPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLEI 186
            R   P+L    F+SF DLV+ ++  +  DA+LA+I +E+ GE+IDRAL+ N + +Y   
Sbjct: 122 RRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKNVIDVYCGN 181

Query: 187 G 187
           G
Sbjct: 182 G 182


>AT1G43140.1 | Symbols:  | Cullin family protein |
           chr1:16232785-16236109 FORWARD LENGTH=721
          Length = 721

 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 69/176 (39%), Positives = 109/176 (61%), Gaps = 2/176 (1%)

Query: 12  FEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENCELLYAK 71
            EE W V++T V +L   +E + +   F     ++ +T +Y +C  +Q   +  + LY K
Sbjct: 17  LEEGWSVMKTGVAKLQRILEDLSEPP-FDPGQYINLYTIIYDMCL-QQPPNDYSQELYNK 74

Query: 72  YKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHFIFRRQL 131
           Y+ V + Y   TVLPS++ +  E ML EL++RW+N+KI+  WLSRF  YL+R ++ RR L
Sbjct: 75  YRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCFYLDRFYVARRGL 134

Query: 132 PSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLEIG 187
           P+L +  F SF+DLV+ +I  +  D +LA+I +E+ GE+IDR LV N + +Y   G
Sbjct: 135 PTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKNVIDVYCGNG 190


>AT1G59800.1 | Symbols:  | Cullin family protein |
           chr1:22004964-22006172 FORWARD LENGTH=255
          Length = 255

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 6/180 (3%)

Query: 8   TTKSFEEMWPVLQTAVDRLINQIEGVDDDSCFTYEDCMSYFTTVYRLCTARQLRVENCEL 67
           T   FE  W  +Q    +LI  IEG + +  F  E  M   T  YR+C  +     N + 
Sbjct: 5   TEIKFEVEWSNIQQGFTKLIRMIEG-ESEPAFNQEIMMMMHTATYRICAYK-----NPQQ 58

Query: 68  LYAKYKKVFEEYINSTVLPSLQGKKVELMLTELLRRWSNYKIMTTWLSRFFHYLERHFIF 127
           LY KY+++ E Y   TVLPSL+ K  E ML EL +RW+ +K++    SR   YL+  F+ 
Sbjct: 59  LYDKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLS 118

Query: 128 RRQLPSLEETSFLSFYDLVHDKINKQVGDAILAMIDQEQAGEKIDRALVNNTLAMYLEIG 187
           ++ LPSL E     F D V+ ++     +AILA+I +E+ GE+IDR LV N + +++E G
Sbjct: 119 KKGLPSLREVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRNVIDVFVENG 178